Tan0008621 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTAAGAACAAATACATGAACTTGATGAGTTTAATTTAGTGCAACAAATTTGAAGAATGCTCACTTTGATATTTGAATTTCCATCTTCAAATTTAATATATCTTCCAAAGGGAGCGCAAAATAAAATTAAAAAAAAAAAAAGAATGAGAATTTGCAGGATGGAATGAGTCGCATTCTTCATTCTTCAGTCTGACCATTCCATCCCCTGCCGGAGCAAACAATTTTCAGAGAGGAAATGAAGACAATAAGGCAACGGCTTCCCCTACACCGTCTTCCACCTCCACCGCAGCTCGTCCACAACCAAATTCCCGCCATTGATTCTGCTTTACTTTCTTCTTCCTCCATTTCCGATTCGGCATCTGCATCCTTACCCAACAAAATCAATACGACTCTGACCCAGGACGAGCTTACAAAGATCAGCCTCCTTCTTCCTCGTCTCTGTCTCTACAACCACCACTCCACTGCAATCACACTTCTGGACGCGGCTCTCCTCGCAAATCCTTCACTTCAATCTCTTCCCCTTTCAATTCTCTCCCATTCTCTTGCTTCCCAATCCGATTTTGCTATCACAATGTCCCTCCTCACCCGTCTCAAGCACCATCGAAATGCTCTTCTCTATTCAACCCCTATTATCACCATGCTCATTTTCTCTTATTGTAAGCGGCGCAAATCCAGGGAGGCCTTGAAGATTTTCCATTGGATGCTAAGACCGGGGTCGCCATGTAAGCCGGACGAGAAGGTTTATAGAACCCTAATTGCGGGACTGTGTCAGAAGGGGATGGTATTCGATGCTTTGAAGGTTCTCAGGAATATGATCGATTCGAATTTGGTTCCGGATAGCGATCTGAGCAATTGGGTTTTTAGGTCTTTGCTGAGAGAAGCGATGATCGGCGAAGCAATGGAGTTAAACCAGGCTTTGGATTGCGCTGGCGACGATCAGGATAGCAGTGACAGTGTGAGAAGGGTGTCGGAATTGTTGGATCGTATTATTACCAATTGGATAGAGTAGAGAAGAGACGGTAAGCCATTTGCTCTCTGTGACTCAATGAATTTATCTTTGCCTCATTTTTTAATGATATTGAGAATGAATGGAGGACTTAATCAAGCTATTTGTAGATCATATGAAACTTCTGCATTTACAAGTATTCAAATTCTGTATTGTAGGATATATGGATAGTACACTGCAAGTCTGCAAGAATATTTTGTTTCATTACTTTGAATGGTTCTTCAGTGAGTTTTATGGTTCATCCCTTTCCCTACACTCTGTTTAATGACATAAAAGTTTTTGAAGCTTAGAAAATGTTTTTTGATTGGAAATAAATTTCATTGACGTATGAAATTTACAGAAGAAGAGCAAAGCTCAAACCAAAGGAGTTACAAAAACTTCTCCAATTGGTACAAAGAGAGGAAAGATCATAAGAACTATAGAAGGATGACATTTACACTAAGGCATTGCAAGCAAAATACTTTGTTCAAAGAAAAAGAAGTTTCTTTGTCTTTAGAGAGCCGATTGTTTGGTTCCTTCCAAGTTGTCCACAAAAACGCCCGGATAAGATGCATCCTAAGAACTTTCTTTTCATCAGAAAAAGGATGGTCATTTAGAGTGTAGGTAAAAATTGCCGATTTAGAAATTTATAACAAAGAGCAGTAATGTAAATCTTTCTTATATGAAACAAATCTTTCATTAGATGGAAAAAAAACATTAAAGGTAGACGTATAAAAGAAGTGATAAAGCGTCCACCCATCAACCATGGAGATTACAGAAAGAGTACAAGTGATCATATTAAAGATAGAAAATAATTACGAAATACTTTGGACTAGCATATGAAAAAAAACTCTTTGTTTGAGTAAAGGAAATGACAGTTAAAACGGGGCACTGAAAACCTTGAGCCATGCTGAAACAAGTGCAGGACACTAGGAAGGGGTTGCTAACTTCCCCATCTTTCTCACAGAGAGGGCATCATGAAGGAGAGGCTGAATGTGTTTTGTTCATGCTAGCAAACGTTTCTGGTTTCTGTCATCAAACTCTTATGGTGTAATCAGTTAGTTATATTACATCTTATAAGTTTATTTTTGCTTAAATTTTTTTTTTTATGAGTATTTTGTTTGCTTTAAAATGATGGCATGAACTGGAAGAAAATCTAAAAATCAGGAGACGATAAATCTATATGCTTGCCATATTTTCCTATTCTGTCTTTTGGGGGGTTTTGGAGAGGGAGAATATCGTGTTTGAACTTTTCTTTGTCAATCAAGTTGGAGCTTAGCAACCATTATGGGTTGGCCTAGTGGTCATAAGAGCTTTAGAGATCAAAGAGTGAATAGGTTCAATCCATGGTGGGCACCTACCTATGATTTAATATCCTATGTGTTTTCAATCAACCATATGCAGTAGGTCAAGTGATTATCTGATGACAAGGTGTGCCTTTGATTGCTCATTCCCCTAGTGATTTGAACTCTAAAAATGATTTTAATGAGAAGGAACTTTTTGCTTCCCTTGTTCTAGCCTCAGTGAAAGAGGTCAGAGATAAATTTGTGCAACTTATTCCAAATATTATACTCGAAAAGGGAGTAAGGAGTAAGGAGGAAGATGTGTGTTCATAGGGGCCAACGAGTTATCTCTTTTCCATGGTGAAAACTTTGAAGAATCGGTTTCTAAATTTCTGATCCTACGAGAGGTTTTCGAATTGAATAGAGAGATTTCTTCAACTTTTAAGGAGCAAGTGGTTAATATTGAGGAATGCAATCTCGACAATTCAGGTGTGCATTTTTATAGAGCTTGCTTGCACCCAAGTGACCCTATTATTAGAAAGTTTGATTCCACTAGTTTGAATGGGTTGGATGATTTGGAGGAGGGTTCTGACGTGAGTCTAAGTATCCAGAAGAATTTTTTCAAATCATGTGTTGCAATTGGTTGATAGTTCAAGAGATAACTCCCAGTCGTTAACTTAGATGGGCTTTTTAATATTACTGATCAATTTGAAAGTAGTCCAATAGCTGAAAAAAAAAAGTTGAGGTGGGCGCAAGATGGCCCAGACAGTTGCTGATATTAAAAAAAAATCAGGTTTATATCATCACTTGTATTGTACAATTAATCTAGACTTGTTTTTATATTCCTCTATTGATGTGGCATTCAAAGTGTAATGTCAGTTTTGCAATCTCACTTATATAAATCATGGGTTTTTTTTGGTGGTTTTATGCATTTTTTCAACCTTTGAATCTCTAATAGATGTGGGATGAGAGATTTGAATCTCTAACCTCTTGGTCGAGAGTAAAGTGAGGTCGAGAGTACATACTTTATGTTAGTTGAACTATGCCCGTAGTGGCGTTTATCGCATACTTTATTTCACAAACATGTCTAAATTTGATTCTAGATTATCCAAAATACGAAAGTTCCCTATATAATGAATACAACTTGGTGAGAAGTTCCTTCTTCCTTATATATTGCCTATTTCTTTTATGAGTTTATGTATATTGTATTTCATAGATTCATAGGTCTCATTAATATTTTGTCTTGTTGGAGCAAGACGGACAAGAAAATGAGTAGGAATTAATACTTATTATTATGCTTTTTTGTTTCCTGGAAATTTCGTTTGAAGAGAAACTAATGTTGGACTACAGGAGGCATTATTACAGTATTAAATTGAAATTTTGAAGTGTGATAAACAAATGGGTCAGTTATTTGTGTGCTTTCCTCTGCATCACTCCCAGTCAAATAAACATAATTTCTGTCATACAAAAGAGTGGATTGTTCATTTTTTATGAATCAACTCTCCCAAAATGAACAAGGTGCTTGTACATCTCAGTGTCTCACAACCGTACCTTACTTCCATAACCTGATGTTATTATTATTAATCGTATTGTTTGAAATCTTGTCTTGTCAGGCTCTTATATATATAGTAGAATGAAGAGGAAAGCTTCCATTTTCAGGGAGATCAGAAAAGCTATTGATATTTCTACCGGTGGGGATATTCACTCGTTCGTTTTTAGAGCAGCAGAAAGCTTGAACATCAAGTTCAATACATGATGGTTGGTTAGGACATGTTTGAGAGTGATTTTGAAATGGCTAAAATTACTTTTATCATATTCAAAATCACTCCAAAATATGTTTTTAATTATTCAAAATCTATTTTTATAGAATGAAAATTGCATTTAAAAGTGTAAATGTTTGGTTTGAGTATTCCTTTGTTTACCTAGCCTAACCATGCTTTTTTTTAGTACAATTGAGGTTGGAGAGATTCAAGGCACAAACCTCATGATTGTTTACTTATTCATCATGTCATTTGAGTTATGCTTTCG TTAAGAACAAATACATGAACTTGATGAGTTTAATTTAGTGCAACAAATTTGAAGAATGCTCACTTTGATATTTGAATTTCCATCTTCAAATTTAATATATCTTCCAAAGGGAGCGCAAAATAAAATTAAAAAAAAAAAAAGAATGAGAATTTGCAGGATGGAATGAGTCGCATTCTTCATTCTTCAGTCTGACCATTCCATCCCCTGCCGGAGCAAACAATTTTCAGAGAGGAAATGAAGACAATAAGGCAACGGCTTCCCCTACACCGTCTTCCACCTCCACCGCAGCTCGTCCACAACCAAATTCCCGCCATTGATTCTGCTTTACTTTCTTCTTCCTCCATTTCCGATTCGGCATCTGCATCCTTACCCAACAAAATCAATACGACTCTGACCCAGGACGAGCTTACAAAGATCAGCCTCCTTCTTCCTCGTCTCTGTCTCTACAACCACCACTCCACTGCAATCACACTTCTGGACGCGGCTCTCCTCGCAAATCCTTCACTTCAATCTCTTCCCCTTTCAATTCTCTCCCATTCTCTTGCTTCCCAATCCGATTTTGCTATCACAATGTCCCTCCTCACCCGTCTCAAGCACCATCGAAATGCTCTTCTCTATTCAACCCCTATTATCACCATGCTCATTTTCTCTTATTGTAAGCGGCGCAAATCCAGGGAGGCCTTGAAGATTTTCCATTGGATGCTAAGACCGGGGTCGCCATGTAAGCCGGACGAGAAGGTTTATAGAACCCTAATTGCGGGACTGTGTCAGAAGGGGATGGTATTCGATGCTTTGAAGGTTCTCAGGAATATGATCGATTCGAATTTGGTTCCGGATAGCGATCTGAGCAATTGGGTTTTTAGGTCTTTGCTGAGAGAAGCGATGATCGGCGAAGCAATGGAGTTAAACCAGGCTTTGGATTGCGCTGGCGACGATCAGGATAGCAGTGACAGTGTGAGAAGGGTGTCGGAATTGTTGGATCGTATTATTACCAATTGGATAGAGTAGAGAAGAGACGGCTCTTATATATATAGTAGAATGAAGAGGAAAGCTTCCATTTTCAGGGAGATCAGAAAAGCTATTGATATTTCTACCGGTGGGGATATTCACTCGTTCGTTTTTAGAGCAGCAGAAAGCTTGAACATCAAGTTCAATACATGATGGTTGGTTAGGACATGTTTGAGAGTGATTTTGAAATGGCTAAAATTACTTTTATCATATTCAAAATCACTCCAAAATATGTTTTTAATTATTCAAAATCTATTTTTATAGAATGAAAATTGCATTTAAAAGTGTAAATGTTTGGTTTGAGTATTCCTTTGTTTACCTAGCCTAACCATGCTTTTTTTTAGTACAATTGAGGTTGGAGAGATTCAAGGCACAAACCTCATGATTGTTTACTTATTCATCATGTCATTTGAGTTATGCTTTCG ATGAAGACAATAAGGCAACGGCTTCCCCTACACCGTCTTCCACCTCCACCGCAGCTCGTCCACAACCAAATTCCCGCCATTGATTCTGCTTTACTTTCTTCTTCCTCCATTTCCGATTCGGCATCTGCATCCTTACCCAACAAAATCAATACGACTCTGACCCAGGACGAGCTTACAAAGATCAGCCTCCTTCTTCCTCGTCTCTGTCTCTACAACCACCACTCCACTGCAATCACACTTCTGGACGCGGCTCTCCTCGCAAATCCTTCACTTCAATCTCTTCCCCTTTCAATTCTCTCCCATTCTCTTGCTTCCCAATCCGATTTTGCTATCACAATGTCCCTCCTCACCCGTCTCAAGCACCATCGAAATGCTCTTCTCTATTCAACCCCTATTATCACCATGCTCATTTTCTCTTATTGTAAGCGGCGCAAATCCAGGGAGGCCTTGAAGATTTTCCATTGGATGCTAAGACCGGGGTCGCCATGTAAGCCGGACGAGAAGGTTTATAGAACCCTAATTGCGGGACTGTGTCAGAAGGGGATGGTATTCGATGCTTTGAAGGTTCTCAGGAATATGATCGATTCGAATTTGGTTCCGGATAGCGATCTGAGCAATTGGGTTTTTAGGTCTTTGCTGAGAGAAGCGATGATCGGCGAAGCAATGGAGTTAAACCAGGCTTTGGATTGCGCTGGCGACGATCAGGATAGCAGTGACAGTGTGAGAAGGGTGTCGGAATTGTTGGATCGTATTATTACCAATTGGATAGAGTAG MKTIRQRLPLHRLPPPPQLVHNQIPAIDSALLSSSSISDSASASLPNKINTTLTQDELTKISLLLPRLCLYNHHSTAITLLDAALLANPSLQSLPLSILSHSLASQSDFAITMSLLTRLKHHRNALLYSTPIITMLIFSYCKRRKSREALKIFHWMLRPGSPCKPDEKVYRTLIAGLCQKGMVFDALKVLRNMIDSNLVPDSDLSNWVFRSLLREAMIGEAMELNQALDCAGDDQDSSDSVRRVSELLDRIITNWIE Homology
BLAST of Tan0008621 vs. ExPASy Swiss-Prot
Match: Q9FMF6 (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g64320 PE=2 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.5e-08 Identity = 36/101 (35.64%), Postives = 55/101 (54.46%), Query Frame = 0
BLAST of Tan0008621 vs. ExPASy Swiss-Prot
Match: Q9T0D6 (Pentatricopeptide repeat-containing protein At4g11690 OS=Arabidopsis thaliana OX=3702 GN=At4g11690 PE=2 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.6e-07 Identity = 34/121 (28.10%), Postives = 61/121 (50.41%), Query Frame = 0
BLAST of Tan0008621 vs. ExPASy Swiss-Prot
Match: P0C8Q3 (Pentatricopeptide repeat-containing protein At4g19890 OS=Arabidopsis thaliana OX=3702 GN=At4g19890 PE=2 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 3.6e-07 Identity = 32/67 (47.76%), Postives = 38/67 (56.72%), Query Frame = 0
BLAST of Tan0008621 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 3.1e-06 Identity = 32/97 (32.99%), Postives = 52/97 (53.61%), Query Frame = 0
BLAST of Tan0008621 vs. ExPASy Swiss-Prot
Match: Q9SUD8 (Pentatricopeptide repeat-containing protein At4g28010 OS=Arabidopsis thaliana OX=3702 GN=At4g28010 PE=2 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 3.1e-06 Identity = 31/100 (31.00%), Postives = 56/100 (56.00%), Query Frame = 0
BLAST of Tan0008621 vs. NCBI nr
Match: XP_038876976.1 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Benincasa hispida]) HSP 1 Score: 387.9 bits (995), Expect = 6.9e-104 Identity = 210/261 (80.46%), Postives = 230/261 (88.12%), Query Frame = 0
BLAST of Tan0008621 vs. NCBI nr
Match: KAG6584178.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 382.5 bits (981), Expect = 2.9e-102 Identity = 205/258 (79.46%), Postives = 227/258 (87.98%), Query Frame = 0
BLAST of Tan0008621 vs. NCBI nr
Match: KAG7019769.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 380.2 bits (975), Expect = 1.4e-101 Identity = 204/258 (79.07%), Postives = 226/258 (87.60%), Query Frame = 0
BLAST of Tan0008621 vs. NCBI nr
Match: XP_022923926.1 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Cucurbita moschata] >XP_022923927.1 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Cucurbita moschata] >XP_022923928.1 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Cucurbita moschata]) HSP 1 Score: 379.4 bits (973), Expect = 2.4e-101 Identity = 206/261 (78.93%), Postives = 227/261 (86.97%), Query Frame = 0
BLAST of Tan0008621 vs. NCBI nr
Match: XP_023520260.1 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 379.0 bits (972), Expect = 3.2e-101 Identity = 204/258 (79.07%), Postives = 228/258 (88.37%), Query Frame = 0
BLAST of Tan0008621 vs. ExPASy TrEMBL
Match: A0A6J1E820 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111431498 PE=4 SV=1) HSP 1 Score: 379.4 bits (973), Expect = 1.2e-101 Identity = 206/261 (78.93%), Postives = 227/261 (86.97%), Query Frame = 0
BLAST of Tan0008621 vs. ExPASy TrEMBL
Match: A0A6J1KEJ7 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111495112 PE=4 SV=1) HSP 1 Score: 377.1 bits (967), Expect = 5.9e-101 Identity = 204/258 (79.07%), Postives = 224/258 (86.82%), Query Frame = 0
BLAST of Tan0008621 vs. ExPASy TrEMBL
Match: A0A6J1C6B0 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111008811 PE=4 SV=1) HSP 1 Score: 366.7 bits (940), Expect = 7.9e-98 Identity = 197/250 (78.80%), Postives = 214/250 (85.60%), Query Frame = 0
BLAST of Tan0008621 vs. ExPASy TrEMBL
Match: A0A0A0LRQ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G051900 PE=4 SV=1) HSP 1 Score: 359.8 bits (922), Expect = 9.7e-96 Identity = 197/259 (76.06%), Postives = 221/259 (85.33%), Query Frame = 0
BLAST of Tan0008621 vs. ExPASy TrEMBL
Match: A0A5A7UP05 (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G002100 PE=4 SV=1) HSP 1 Score: 335.5 bits (859), Expect = 2.0e-88 Identity = 186/246 (75.61%), Postives = 205/246 (83.33%), Query Frame = 0
BLAST of Tan0008621 vs. TAIR 10
Match: AT5G64320.1 (Pentatricopeptide repeat (PPR) superfamily protein ) HSP 1 Score: 60.8 bits (146), Expect = 1.8e-09 Identity = 36/101 (35.64%), Postives = 55/101 (54.46%), Query Frame = 0
BLAST of Tan0008621 vs. TAIR 10
Match: AT4G11690.1 (Pentatricopeptide repeat (PPR-like) superfamily protein ) HSP 1 Score: 58.2 bits (139), Expect = 1.2e-08 Identity = 34/121 (28.10%), Postives = 61/121 (50.41%), Query Frame = 0
BLAST of Tan0008621 vs. TAIR 10
Match: AT4G19890.1 (Pentatricopeptide repeat (PPR-like) superfamily protein ) HSP 1 Score: 57.0 bits (136), Expect = 2.6e-08 Identity = 32/67 (47.76%), Postives = 38/67 (56.72%), Query Frame = 0
BLAST of Tan0008621 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein ) HSP 1 Score: 53.9 bits (128), Expect = 2.2e-07 Identity = 32/97 (32.99%), Postives = 52/97 (53.61%), Query Frame = 0
BLAST of Tan0008621 vs. TAIR 10
Match: AT4G28010.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 53.9 bits (128), Expect = 2.2e-07 Identity = 31/100 (31.00%), Postives = 56/100 (56.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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