Tan0008564 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAATGACTAATTTCGACAATAAATTACTCCTTAAAGAAAAAAGTTGAAGATAAGCAAATTGGGTCCCAATATTTTATAATCTGCAAAGTTTTAATGCTTGTTTACTTGAAATCCATTTAAGAACCGCTTTGGTTTTCATAAGCATATATTTTTTTAAAAGCTCGAAGACCAGACTCTTTCAAAACCTCCAATGGCAACGACAATGGCAGTCACAAACTGCAAATCTACTCCTCTTGCCCTAAAATCTGTTCCATCTCTTCAAATCAAACCTCTGAGCAAAATTTTTATGCTCAAACCTGCAAAAATTTCAGTCAACAGAACTCCCAAACTCCGAATTACATCTTCTATCAAGAACAACCTGGTTAGTATCTGTGTGTGTGTGTAGATTTCTTAGATCGGATCATTATTCTTACAGTCTGTTTGATTTTGGTAGGTTTTCGAGGATCGTTTCAATGGTGTTATTTGCTACAGAGACGACGATGGAGAGATCATTTGCGAAGGATATGACGACGAAGAGCCTCGTATTGAGCAAGAGATTGAGAAATTACCTTGTGAAAAATCTTACCGAAGGTAGAAACGAGATCTGGATTCATTGTTGACTGAATCGAGAGGTATTGTAATAGCAATTTTTCTTGGTTCTGATTCTTATTCTTTCTATCTGCGAAGTTCCAGATCCGATGGCGAATTGAAGATCGATCGTCTTCTCCTGCAGCGAAGTTGGGAGAAAAGCTTAGAAGCCGTTAATGGCGGTTCTGGAAGTGGAAGAGGAGATCTTCGAATTCGGGCGAATGGCTTGAGTTTGTAGTTATGGCTTGAGCAGTTGAGCTCTGTAAAAATGGAAGTTGCAGATCCTAAGCGAAGGGAAATTGAAATTTCCTTATTAGGATTTTGAATAATTTTACCCTTCTTTATACTTTATAGTTGATTTAGATTGTAAATATAGCATATAATAAAAATTGTAAAAATGATAAAATCTCGTTTGCTGATGATTATTCAATCATCACTAATGTAAATTACTTTTGAGTAAAAACACAAAGTTGTTTTGAGATTTTTTTTCCCATCTTTTTTTTAGTTCCAACTAAGTGAGTTATATTCGAAATGATACAAAA CAATGACTAATTTCGACAATAAATTACTCCTTAAAGAAAAAAGTTGAAGATAAGCAAATTGGGTCCCAATATTTTATAATCTGCAAAGTTTTAATGCTTGTTTACTTGAAATCCATTTAAGAACCGCTTTGGTTTTCATAAGCATATATTTTTTTAAAAGCTCGAAGACCAGACTCTTTCAAAACCTCCAATGGCAACGACAATGGCAGTCACAAACTGCAAATCTACTCCTCTTGCCCTAAAATCTGTTCCATCTCTTCAAATCAAACCTCTGAGCAAAATTTTTATGCTCAAACCTGCAAAAATTTCAGTCAACAGAACTCCCAAACTCCGAATTACATCTTCTATCAAGAACAACCTGGTTTTCGAGGATCGTTTCAATGGTGTTATTTGCTACAGAGACGACGATGGAGAGATCATTTGCGAAGGATATGACGACGAAGAGCCTCGTATTGAGCAAGAGATTGAGAAATTACCTTGTGAAAAATCTTACCGAAGGTAGAAACGAGATCTGGATTCATTGTTGACTGAATCGAGAGGTATTGTAATAGCAATTTTTCTTGGTTCTGATTCTTATTCTTTCTATCTGCGAAGTTCCAGATCCGATGGCGAATTGAAGATCGATCGTCTTCTCCTGCAGCGAAGTTGGGAGAAAAGCTTAGAAGCCGTTAATGGCGGTTCTGGAAGTGGAAGAGGAGATCTTCGAATTCGGGCGAATGGCTTGAGTTTGTAGTTATGGCTTGAGCAGTTGAGCTCTGTAAAAATGGAAGTTGCAGATCCTAAGCGAAGGGAAATTGAAATTTCCTTATTAGGATTTTGAATAATTTTACCCTTCTTTATACTTTATAGTTGATTTAGATTGTAAATATAGCATATAATAAAAATTGTAAAAATGATAAAATCTCGTTTGCTGATGATTATTCAATCATCACTAATGTAAATTACTTTTGAGTAAAAACACAAAGTTGTTTTGAGATTTTTTTTCCCATCTTTTTTTTAGTTCCAACTAAGTGAGTTATATTCGAAATGATACAAAA ATGGCAACGACAATGGCAGTCACAAACTGCAAATCTACTCCTCTTGCCCTAAAATCTGTTCCATCTCTTCAAATCAAACCTCTGAGCAAAATTTTTATGCTCAAACCTGCAAAAATTTCAGTCAACAGAACTCCCAAACTCCGAATTACATCTTCTATCAAGAACAACCTGGTTTTCGAGGATCGTTTCAATGGTGTTATTTGCTACAGAGACGACGATGGAGAGATCATTTGCGAAGGATATGACGACGAAGAGCCTCGTATTGAGCAAGAGATTGAGAAATTACCTTGTGAAAAATCTTACCGAAGGTAG MATTMAVTNCKSTPLALKSVPSLQIKPLSKIFMLKPAKISVNRTPKLRITSSIKNNLVFEDRFNGVICYRDDDGEIICEGYDDEEPRIEQEIEKLPCEKSYRR Homology
BLAST of Tan0008564 vs. NCBI nr
Match: XP_023526222.1 (uncharacterized protein LOC111789773 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 158.3 bits (399), Expect = 3.6e-35 Identity = 81/103 (78.64%), Postives = 88/103 (85.44%), Query Frame = 0
BLAST of Tan0008564 vs. NCBI nr
Match: XP_022956325.1 (uncharacterized protein LOC111458058 [Cucurbita moschata] >KAG6581790.1 hypothetical protein SDJN03_21792, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 157.9 bits (398), Expect = 4.6e-35 Identity = 80/103 (77.67%), Postives = 88/103 (85.44%), Query Frame = 0
BLAST of Tan0008564 vs. NCBI nr
Match: KAG7018241.1 (hypothetical protein SDJN02_20109 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 157.9 bits (398), Expect = 4.6e-35 Identity = 80/103 (77.67%), Postives = 88/103 (85.44%), Query Frame = 0
BLAST of Tan0008564 vs. NCBI nr
Match: XP_022980749.1 (uncharacterized protein LOC111480023 [Cucurbita maxima]) HSP 1 Score: 156.0 bits (393), Expect = 1.8e-34 Identity = 79/103 (76.70%), Postives = 86/103 (83.50%), Query Frame = 0
BLAST of Tan0008564 vs. NCBI nr
Match: XP_038900432.1 (uncharacterized protein LOC120087657 [Benincasa hispida]) HSP 1 Score: 152.9 bits (385), Expect = 1.5e-33 Identity = 80/100 (80.00%), Postives = 87/100 (87.00%), Query Frame = 0
BLAST of Tan0008564 vs. ExPASy TrEMBL
Match: A0A6J1GXI0 (uncharacterized protein LOC111458058 OS=Cucurbita moschata OX=3662 GN=LOC111458058 PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 2.2e-35 Identity = 80/103 (77.67%), Postives = 88/103 (85.44%), Query Frame = 0
BLAST of Tan0008564 vs. ExPASy TrEMBL
Match: A0A6J1J044 (uncharacterized protein LOC111480023 OS=Cucurbita maxima OX=3661 GN=LOC111480023 PE=4 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 8.5e-35 Identity = 79/103 (76.70%), Postives = 86/103 (83.50%), Query Frame = 0
BLAST of Tan0008564 vs. ExPASy TrEMBL
Match: A0A5D3D6I4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold522G00800 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 4.8e-30 Identity = 73/96 (76.04%), Postives = 80/96 (83.33%), Query Frame = 0
BLAST of Tan0008564 vs. ExPASy TrEMBL
Match: A0A1S3CC94 (uncharacterized protein LOC103499196 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499196 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 4.8e-30 Identity = 73/96 (76.04%), Postives = 80/96 (83.33%), Query Frame = 0
BLAST of Tan0008564 vs. ExPASy TrEMBL
Match: A0A1S3CCR0 (uncharacterized protein LOC103499196 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499196 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 4.8e-30 Identity = 73/96 (76.04%), Postives = 80/96 (83.33%), Query Frame = 0
BLAST of Tan0008564 vs. TAIR 10
Match: AT3G14280.1 (unknown protein; Has 51 Blast hits to 51 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 50.8 bits (120), Expect = 7.4e-07 Identity = 30/70 (42.86%), Postives = 42/70 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|