Tan0008546 (gene) Snake gourd v1

Overview
NameTan0008546
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTPRXL protein
LocationLG11: 2529092 .. 2529781 (-)
RNA-Seq ExpressionTan0008546
SyntenyTan0008546
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTTTCAAGAAGATGCAAAGTGGAAACTACGACCAAATCTCTCAAAAATCTCTCCAAATCAAACATGAAGATAGATTCTTCACAAGGGCTCTATCCAAAGACCCTAATTCCGTCGCCAACTCTTCTTTTAGAGTTTATTACGGCGGCGCCGCCGGTGCCATTCCCTTCAGATGGGAGTCACGGCCGGGAACTCCAAAGCATACTTTTTCAGATACTTCAATCCCTCCTCTTACTCCTCCTCCTTCTTACTACTCCTCTTCACATTCTACCTCTAAGGCCTCTTCCAAACCAACCCTTTTGAGCTCGATTTTTCCCTGGTTCACGCCGAGGAAATCTCGAACTCCCTCGTCCTTCTCTTTCTCTTCTGGCTCCTCTTCCTCTTCCTCGTCCTTAGCCTCATGGTCATCGTCAAGCTCGTCGCCATCGCCTTTTGTTCGACCGAAATTCCTCAAGCGTCGTCGCTGCTCCTTCGATTCTCCGAGCTTGCCTTTTGAGTATAATTTCGACGGGGACGAGCCGGTGGGGACCTCCGATTCTCCGACATCAACTCTATGCTTTGGTGGTTCTTCAAGTGGTAGGGCTTCATTTTTCGGAGGTTGCTACCAGTTAGTGAGTGTGAAGAATGCTTTGTTGTCTATGGTTGGCCATGGATCTGCAAGCCGAGGTACTCTTAATTAGTTGACATAATTT

mRNA sequence

GCTTTCAAGAAGATGCAAAGTGGAAACTACGACCAAATCTCTCAAAAATCTCTCCAAATCAAACATGAAGATAGATTCTTCACAAGGGCTCTATCCAAAGACCCTAATTCCGTCGCCAACTCTTCTTTTAGAGTTTATTACGGCGGCGCCGCCGGTGCCATTCCCTTCAGATGGGAGTCACGGCCGGGAACTCCAAAGCATACTTTTTCAGATACTTCAATCCCTCCTCTTACTCCTCCTCCTTCTTACTACTCCTCTTCACATTCTACCTCTAAGGCCTCTTCCAAACCAACCCTTTTGAGCTCGATTTTTCCCTGGTTCACGCCGAGGAAATCTCGAACTCCCTCGTCCTTCTCTTTCTCTTCTGGCTCCTCTTCCTCTTCCTCGTCCTTAGCCTCATGGTCATCGTCAAGCTCGTCGCCATCGCCTTTTGTTCGACCGAAATTCCTCAAGCGTCGTCGCTGCTCCTTCGATTCTCCGAGCTTGCCTTTTGAGTATAATTTCGACGGGGACGAGCCGGTGGGGACCTCCGATTCTCCGACATCAACTCTATGCTTTGGTGGTTCTTCAAGTGGTAGGGCTTCATTTTTCGGAGGTTGCTACCAGTTAGTGAGTGTGAAGAATGCTTTGTTGTCTATGGTTGGCCATGGATCTGCAAGCCGAGGTACTCTTAATTAGTTGACATAATTT

Coding sequence (CDS)

ATGCAAAGTGGAAACTACGACCAAATCTCTCAAAAATCTCTCCAAATCAAACATGAAGATAGATTCTTCACAAGGGCTCTATCCAAAGACCCTAATTCCGTCGCCAACTCTTCTTTTAGAGTTTATTACGGCGGCGCCGCCGGTGCCATTCCCTTCAGATGGGAGTCACGGCCGGGAACTCCAAAGCATACTTTTTCAGATACTTCAATCCCTCCTCTTACTCCTCCTCCTTCTTACTACTCCTCTTCACATTCTACCTCTAAGGCCTCTTCCAAACCAACCCTTTTGAGCTCGATTTTTCCCTGGTTCACGCCGAGGAAATCTCGAACTCCCTCGTCCTTCTCTTTCTCTTCTGGCTCCTCTTCCTCTTCCTCGTCCTTAGCCTCATGGTCATCGTCAAGCTCGTCGCCATCGCCTTTTGTTCGACCGAAATTCCTCAAGCGTCGTCGCTGCTCCTTCGATTCTCCGAGCTTGCCTTTTGAGTATAATTTCGACGGGGACGAGCCGGTGGGGACCTCCGATTCTCCGACATCAACTCTATGCTTTGGTGGTTCTTCAAGTGGTAGGGCTTCATTTTTCGGAGGTTGCTACCAGTTAGTGAGTGTGAAGAATGCTTTGTTGTCTATGGTTGGCCATGGATCTGCAAGCCGAGGTACTCTTAATTAG

Protein sequence

MQSGNYDQISQKSLQIKHEDRFFTRALSKDPNSVANSSFRVYYGGAAGAIPFRWESRPGTPKHTFSDTSIPPLTPPPSYYSSSHSTSKASSKPTLLSSIFPWFTPRKSRTPSSFSFSSGSSSSSSSLASWSSSSSSPSPFVRPKFLKRRRCSFDSPSLPFEYNFDGDEPVGTSDSPTSTLCFGGSSSGRASFFGGCYQLVSVKNALLSMVGHGSASRGTLN
Homology
BLAST of Tan0008546 vs. NCBI nr
Match: XP_016901982.1 (PREDICTED: putative uncharacterized protein DDB_G0277255 [Cucumis melo] >KAA0052017.1 putative serine-rich protein [Cucumis melo var. makuwa])

HSP 1 Score: 331.3 bits (848), Expect = 6.6e-87
Identity = 191/232 (82.33%), Postives = 197/232 (84.91%), Query Frame = 0

Query: 1   MQSGNYDQISQKSLQI-KHEDRFFTRALSKDPNSVANSSFRVYYGGAAGAIPFRWESRPG 60
           MQ+ NYDQISQKS QI KHEDRFFTRALSK+ NS  NSSFRVYYGGA GAIPFRWESRPG
Sbjct: 1   MQTQNYDQISQKSSQITKHEDRFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG 60

Query: 61  TPKHTFSDTSIPPLTPPPSYYSSSHSTSKASSKPTLLSSIFPWFTPRKSRTPSSFSFSSG 120
           TPKHTFSDTSIPPLTPPPSY+SSSHSTSKASSKPTLLSSIFP  TPRKSRT  SFS SSG
Sbjct: 61  TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTFPSFSSSSG 120

Query: 121 SSSSSSSLASW----SSSSSSPSPFVRPKFLKRRRCSFDSPSLPFEYNF---DGDEPVGT 180
           SSSSSSSLASW    SSSSSSPSPFVRPKF KRRR   D PSLPFEY+F   DGDE V  
Sbjct: 121 SSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRHFSDIPSLPFEYSFDDKDGDEVVAG 180

Query: 181 S---DSPTSTLCFGGSSSGRASFFGGCYQLVSVKNALLSMVGHGSASRGTLN 222
           S   +SPTS LCFGG SS RAS FGGCYQLVSVK ALLS+VGHGSASRGTLN
Sbjct: 181 STAPNSPTSILCFGGGSSSRASLFGGCYQLVSVKKALLSIVGHGSASRGTLN 232

BLAST of Tan0008546 vs. NCBI nr
Match: XP_011656432.1 (putative protein TPRXL [Cucumis sativus])

HSP 1 Score: 328.9 bits (842), Expect = 3.3e-86
Identity = 188/231 (81.39%), Postives = 197/231 (85.28%), Query Frame = 0

Query: 1   MQSGNYDQISQKSLQI-KHEDRFFTRALSKDPNSVANSSFRVYYGGAAGAIPFRWESRPG 60
           M++ +YDQISQKS  I KHED+FFTRALSK+ NS  NSSFRVYYGGA GAIPFRWESRPG
Sbjct: 1   MKTQSYDQISQKSFPITKHEDKFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG 60

Query: 61  TPKHTFSDTSIPPLTPPPSYYSSSHSTSKASSKPTLLSSIFPWFTPRKSRTPSSFSFSSG 120
           TPKHTFSDTSIPPLTPPPSY+SSSHSTSKASSKPTLLSSIFP  TPRKSRT  SFS SSG
Sbjct: 61  TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTSPSFSSSSG 120

Query: 121 SSSSSSSLASW----SSSSSSPSPFVRPKFLKRRRCSFDSPSLPFEYNF---DGDEPVGT 180
           SSSSSSSLASW    SSSSSSPSPFVRPKF KRRR   D PSLPFEY+F   DGDE V  
Sbjct: 121 SSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRRFSDIPSLPFEYSFDDKDGDEVVAG 180

Query: 181 S--DSPTSTLCFGGSSSGRASFFGGCYQLVSVKNALLSMVGHGSASRGTLN 222
           S  +SPTS LCFGG SS RAS FGGCYQLVSVKNALLS+VGHGSASRGTLN
Sbjct: 181 SAPNSPTSILCFGGGSSSRASLFGGCYQLVSVKNALLSIVGHGSASRGTLN 231

BLAST of Tan0008546 vs. NCBI nr
Match: KAE8646577.1 (hypothetical protein Csa_005771 [Cucumis sativus])

HSP 1 Score: 323.6 bits (828), Expect = 1.4e-84
Identity = 185/228 (81.14%), Postives = 194/228 (85.09%), Query Frame = 0

Query: 1   MQSGNYDQISQKSLQI-KHEDRFFTRALSKDPNSVANSSFRVYYGGAAGAIPFRWESRPG 60
           M++ +YDQISQKS  I KHED+FFTRALSK+ NS  NSSFRVYYGGA GAIPFRWESRPG
Sbjct: 1   MKTQSYDQISQKSFPITKHEDKFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG 60

Query: 61  TPKHTFSDTSIPPLTPPPSYYSSSHSTSKASSKPTLLSSIFPWFTPRKSRTPSSFSFSSG 120
           TPKHTFSDTSIPPLTPPPSY+SSSHSTSKASSKPTLLSSIFP  TPRKSRT  SFS SSG
Sbjct: 61  TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTSPSFSSSSG 120

Query: 121 SSSSSSSLASW----SSSSSSPSPFVRPKFLKRRRCSFDSPSLPFEYNF---DGDEPVGT 180
           SSSSSSSLASW    SSSSSSPSPFVRPKF KRRR   D PSLPFEY+F   DGDE V  
Sbjct: 121 SSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRRFSDIPSLPFEYSFDDKDGDEVVAG 180

Query: 181 S--DSPTSTLCFGGSSSGRASFFGGCYQLVSVKNALLSMVGHGSASRG 219
           S  +SPTS LCFGG SS RAS FGGCYQLVSVKNALLS+VGHGSASRG
Sbjct: 181 SAPNSPTSILCFGGGSSSRASLFGGCYQLVSVKNALLSIVGHGSASRG 228

BLAST of Tan0008546 vs. NCBI nr
Match: XP_038885974.1 (putative protein TPRXL [Benincasa hispida])

HSP 1 Score: 323.2 bits (827), Expect = 1.8e-84
Identity = 189/231 (81.82%), Postives = 194/231 (83.98%), Query Frame = 0

Query: 1   MQSGNYDQISQKSLQ-IKHEDRFFTRALSKDPNSVANSSFRVYYGGAAGAIPFRWESRPG 60
           MQ+ NYDQISQKS Q  KHEDRFF RALSKD NS  NSSFRVYYGGA GAIPFRWESRPG
Sbjct: 1   MQTQNYDQISQKSFQSTKHEDRFFNRALSKDLNSTTNSSFRVYYGGATGAIPFRWESRPG 60

Query: 61  TPKHTFSDTSIPPLTPPPSYYSSSHSTSKASSKPTLLSSIFPWFTPRKSRTPSSFSFSSG 120
           TPKH FSDTSIPPLTPPPSYYSSSHSTSKASSKPTLLSSIFP  TPRKSRT SSFS SSG
Sbjct: 61  TPKHPFSDTSIPPLTPPPSYYSSSHSTSKASSKPTLLSSIFPRLTPRKSRTSSSFSSSSG 120

Query: 121 SSSSSSSLASW----SSSSSSPSPFVRPKFLKRRRCSFDSPSLPFEYNFDG---DEPV-- 180
           SSSSSSS ASW    SSSSSSPS FVRPKF KRRR   +S SLPFEY+FD    DE V  
Sbjct: 121 SSSSSSS-ASWSSSRSSSSSSPSAFVRPKFFKRRRRFSESSSLPFEYSFDDNDRDEVVTG 180

Query: 181 GTSDSPTSTLCFGGSSSGRASFFGGCYQLVSVKNALLSMVGHGSASRGTLN 222
            T +SPTSTLCFGG SS RAS FGGCYQLVSVKNALLS+VGHGSASRGTLN
Sbjct: 181 STPNSPTSTLCFGGCSSSRASLFGGCYQLVSVKNALLSIVGHGSASRGTLN 230

BLAST of Tan0008546 vs. NCBI nr
Match: XP_022134140.1 (putative protein TPRXL [Momordica charantia])

HSP 1 Score: 292.4 bits (747), Expect = 3.4e-75
Identity = 171/229 (74.67%), Postives = 189/229 (82.53%), Query Frame = 0

Query: 1   MQSGNYDQISQKSLQIKHE-DRFFTR---ALSKDPNSVANSSFRVYYGGAAGAIPFRWES 60
           MQS NYDQISQK LQIKH+ DRFFTR    LSK+ NS ANSSFRVYYGGA+GAIPFRWES
Sbjct: 1   MQSANYDQISQKPLQIKHQNDRFFTRPAPVLSKEANSAANSSFRVYYGGASGAIPFRWES 60

Query: 61  RPGTPKHTFSDTSIPPLTPPPSYYSSSHSTSKASSKPTLLSSIFPWFTPRKSR-TPSSFS 120
           RPGTPKH++S+TSIPPLTPPPSYY+SSHS SKASSKPTLLSSIFP   PR+SR +PSSFS
Sbjct: 61  RPGTPKHSYSETSIPPLTPPPSYYTSSHSNSKASSKPTLLSSIFPRLAPRRSRNSPSSFS 120

Query: 121 FSSGSSSSSSSLASWSSSSSSPSPFVRPKFLKRRRCSFDSPSLPFEYNF---DGDEPVGT 180
               S+S SSS +SWSSS SS S   +  F KRRR   D+PSLPFEY+F   DGDEP G+
Sbjct: 121 ----SASLSSSFSSWSSSRSSSSSSPKLNFFKRRRSISDTPSLPFEYSFDDGDGDEP-GS 180

Query: 181 SDSPTSTLCFGGSSSGRASFFGGCYQLVSVKNALLSMVGHGSASRGTLN 222
           S+SPTSTLCFGG+SS RAS F GCYQLVSVKNA LSMVGHGSA RGT+N
Sbjct: 181 SNSPTSTLCFGGASSSRAS-FRGCYQLVSVKNAFLSMVGHGSAGRGTVN 223

BLAST of Tan0008546 vs. ExPASy TrEMBL
Match: A0A5A7UC51 (Putative serine-rich protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G005080 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 3.2e-87
Identity = 191/232 (82.33%), Postives = 197/232 (84.91%), Query Frame = 0

Query: 1   MQSGNYDQISQKSLQI-KHEDRFFTRALSKDPNSVANSSFRVYYGGAAGAIPFRWESRPG 60
           MQ+ NYDQISQKS QI KHEDRFFTRALSK+ NS  NSSFRVYYGGA GAIPFRWESRPG
Sbjct: 1   MQTQNYDQISQKSSQITKHEDRFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG 60

Query: 61  TPKHTFSDTSIPPLTPPPSYYSSSHSTSKASSKPTLLSSIFPWFTPRKSRTPSSFSFSSG 120
           TPKHTFSDTSIPPLTPPPSY+SSSHSTSKASSKPTLLSSIFP  TPRKSRT  SFS SSG
Sbjct: 61  TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTFPSFSSSSG 120

Query: 121 SSSSSSSLASW----SSSSSSPSPFVRPKFLKRRRCSFDSPSLPFEYNF---DGDEPVGT 180
           SSSSSSSLASW    SSSSSSPSPFVRPKF KRRR   D PSLPFEY+F   DGDE V  
Sbjct: 121 SSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRHFSDIPSLPFEYSFDDKDGDEVVAG 180

Query: 181 S---DSPTSTLCFGGSSSGRASFFGGCYQLVSVKNALLSMVGHGSASRGTLN 222
           S   +SPTS LCFGG SS RAS FGGCYQLVSVK ALLS+VGHGSASRGTLN
Sbjct: 181 STAPNSPTSILCFGGGSSSRASLFGGCYQLVSVKKALLSIVGHGSASRGTLN 232

BLAST of Tan0008546 vs. ExPASy TrEMBL
Match: A0A1S4E178 (Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103496610 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 3.2e-87
Identity = 191/232 (82.33%), Postives = 197/232 (84.91%), Query Frame = 0

Query: 1   MQSGNYDQISQKSLQI-KHEDRFFTRALSKDPNSVANSSFRVYYGGAAGAIPFRWESRPG 60
           MQ+ NYDQISQKS QI KHEDRFFTRALSK+ NS  NSSFRVYYGGA GAIPFRWESRPG
Sbjct: 1   MQTQNYDQISQKSSQITKHEDRFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG 60

Query: 61  TPKHTFSDTSIPPLTPPPSYYSSSHSTSKASSKPTLLSSIFPWFTPRKSRTPSSFSFSSG 120
           TPKHTFSDTSIPPLTPPPSY+SSSHSTSKASSKPTLLSSIFP  TPRKSRT  SFS SSG
Sbjct: 61  TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTFPSFSSSSG 120

Query: 121 SSSSSSSLASW----SSSSSSPSPFVRPKFLKRRRCSFDSPSLPFEYNF---DGDEPVGT 180
           SSSSSSSLASW    SSSSSSPSPFVRPKF KRRR   D PSLPFEY+F   DGDE V  
Sbjct: 121 SSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRHFSDIPSLPFEYSFDDKDGDEVVAG 180

Query: 181 S---DSPTSTLCFGGSSSGRASFFGGCYQLVSVKNALLSMVGHGSASRGTLN 222
           S   +SPTS LCFGG SS RAS FGGCYQLVSVK ALLS+VGHGSASRGTLN
Sbjct: 181 STAPNSPTSILCFGGGSSSRASLFGGCYQLVSVKKALLSIVGHGSASRGTLN 232

BLAST of Tan0008546 vs. ExPASy TrEMBL
Match: A0A0A0K7T8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014460 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.6e-86
Identity = 188/231 (81.39%), Postives = 197/231 (85.28%), Query Frame = 0

Query: 1   MQSGNYDQISQKSLQI-KHEDRFFTRALSKDPNSVANSSFRVYYGGAAGAIPFRWESRPG 60
           M++ +YDQISQKS  I KHED+FFTRALSK+ NS  NSSFRVYYGGA GAIPFRWESRPG
Sbjct: 1   MKTQSYDQISQKSFPITKHEDKFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG 60

Query: 61  TPKHTFSDTSIPPLTPPPSYYSSSHSTSKASSKPTLLSSIFPWFTPRKSRTPSSFSFSSG 120
           TPKHTFSDTSIPPLTPPPSY+SSSHSTSKASSKPTLLSSIFP  TPRKSRT  SFS SSG
Sbjct: 61  TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTSPSFSSSSG 120

Query: 121 SSSSSSSLASW----SSSSSSPSPFVRPKFLKRRRCSFDSPSLPFEYNF---DGDEPVGT 180
           SSSSSSSLASW    SSSSSSPSPFVRPKF KRRR   D PSLPFEY+F   DGDE V  
Sbjct: 121 SSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRRFSDIPSLPFEYSFDDKDGDEVVAG 180

Query: 181 S--DSPTSTLCFGGSSSGRASFFGGCYQLVSVKNALLSMVGHGSASRGTLN 222
           S  +SPTS LCFGG SS RAS FGGCYQLVSVKNALLS+VGHGSASRGTLN
Sbjct: 181 SAPNSPTSILCFGGGSSSRASLFGGCYQLVSVKNALLSIVGHGSASRGTLN 231

BLAST of Tan0008546 vs. ExPASy TrEMBL
Match: A0A6J1BX95 (Uncharacterized protein OS=Momordica charantia OX=3673 GN=LOC111006479 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.6e-75
Identity = 171/229 (74.67%), Postives = 189/229 (82.53%), Query Frame = 0

Query: 1   MQSGNYDQISQKSLQIKHE-DRFFTR---ALSKDPNSVANSSFRVYYGGAAGAIPFRWES 60
           MQS NYDQISQK LQIKH+ DRFFTR    LSK+ NS ANSSFRVYYGGA+GAIPFRWES
Sbjct: 1   MQSANYDQISQKPLQIKHQNDRFFTRPAPVLSKEANSAANSSFRVYYGGASGAIPFRWES 60

Query: 61  RPGTPKHTFSDTSIPPLTPPPSYYSSSHSTSKASSKPTLLSSIFPWFTPRKSR-TPSSFS 120
           RPGTPKH++S+TSIPPLTPPPSYY+SSHS SKASSKPTLLSSIFP   PR+SR +PSSFS
Sbjct: 61  RPGTPKHSYSETSIPPLTPPPSYYTSSHSNSKASSKPTLLSSIFPRLAPRRSRNSPSSFS 120

Query: 121 FSSGSSSSSSSLASWSSSSSSPSPFVRPKFLKRRRCSFDSPSLPFEYNF---DGDEPVGT 180
               S+S SSS +SWSSS SS S   +  F KRRR   D+PSLPFEY+F   DGDEP G+
Sbjct: 121 ----SASLSSSFSSWSSSRSSSSSSPKLNFFKRRRSISDTPSLPFEYSFDDGDGDEP-GS 180

Query: 181 SDSPTSTLCFGGSSSGRASFFGGCYQLVSVKNALLSMVGHGSASRGTLN 222
           S+SPTSTLCFGG+SS RAS F GCYQLVSVKNA LSMVGHGSA RGT+N
Sbjct: 181 SNSPTSTLCFGGASSSRAS-FRGCYQLVSVKNAFLSMVGHGSAGRGTVN 223

BLAST of Tan0008546 vs. ExPASy TrEMBL
Match: A0A6J1K022 (uncharacterized serine-rich protein C215.13-like OS=Cucurbita maxima OX=3661 GN=LOC111489820 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 3.2e-71
Identity = 163/223 (73.09%), Postives = 172/223 (77.13%), Query Frame = 0

Query: 1   MQSGNYDQISQKSLQIKHEDRFFTRALSKDPNSVANSSFRVYYGGAAGAIPFRWESRPGT 60
           M++GNY QIS                  K+ NS ANSSFRVYYGGA GAIPFRWESRPGT
Sbjct: 1   MEAGNYHQIS-----------------LKEANSAANSSFRVYYGGATGAIPFRWESRPGT 60

Query: 61  PKHTFSDTSIPPLTPPPSYYSSSHSTSKASSKPTLLSSIFPWFTPRKSRTPSSFSFSSGS 120
           PKHT+SDTSIPPLTPPPSYYSSSHSTSK S KPT  +SIF     RKSRT SSFSFSS S
Sbjct: 61  PKHTYSDTSIPPLTPPPSYYSSSHSTSKPSPKPTRFTSIF-----RKSRTASSFSFSSSS 120

Query: 121 SSSSSSLASWSSSSSSPSPFVRPKFLKRRRCSFDSPSLPFEYNFD---GDEPVGTSDSPT 180
           SSSSSS  SWSSS SSPS FVRPKF K RRC  +SPSLPFE +FD   GDE VG+ DSPT
Sbjct: 121 SSSSSSFTSWSSSRSSPSAFVRPKFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPT 180

Query: 181 STLCF-GGSSSGRASFFGGCYQLVSVKNALLSMVGHGSASRGT 220
           STLCF GGSSS RAS F GCYQLVSVKNALLS+VGHGSASRGT
Sbjct: 181 STLCFGGGSSSRRASLFRGCYQLVSVKNALLSIVGHGSASRGT 201

BLAST of Tan0008546 vs. TAIR 10
Match: AT2G40475.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56260.2); Has 477 Blast hits to 219 proteins in 41 species: Archae - 0; Bacteria - 4; Metazoa - 91; Fungi - 61; Plants - 144; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). )

HSP 1 Score: 90.5 bits (223), Expect = 1.8e-18
Identity = 84/189 (44.44%), Postives = 109/189 (57.67%), Query Frame = 0

Query: 32  NSVANSSFRVYYGGAAGAIPFRWESRPGTPKHT-FSDT-SIPPLTPPPSYYSSSHST-SK 91
           +S  NSS R+YY G A ++PF WE+RPGTPKH  FS++  +PPLTPPPSYYSSS S+ +K
Sbjct: 22  SSQVNSSSRIYYYGGA-SVPFLWETRPGTPKHALFSESLRLPPLTPPPSYYSSSSSSGNK 81

Query: 92  ASSKPTLLSSIFPWFTPRKSRTPSSFSFSSGSSSSSSSLASWSSSSSSPSPFVRPKFLKR 151
            S   T+  + F      +  +  SFS+SS SSSSSSS     SSSS PS        + 
Sbjct: 82  LSKARTIKQTRFVKTLLSRHVSRPSFSWSSASSSSSSSY----SSSSPPSKVEH----RP 141

Query: 152 RRCSFDSPSLPFEYNFDGDEPVGTSDSPTSTLCFGGSSSGRASFFGGCYQLVSVKNALLS 211
           R+C   S S    Y  + DE    S SPTSTLC+     G +S  G      S+K AL S
Sbjct: 142 RKCYSCSRS----YVKEDDEEEIVSSSPTSTLCY---KRGFSSSMG------SMKRALCS 188

Query: 212 MVGHGSASR 218
           ++ HGS+ +
Sbjct: 202 VLSHGSSRK 188

BLAST of Tan0008546 vs. TAIR 10
Match: AT3G56260.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40475.1). )

HSP 1 Score: 76.6 bits (187), Expect = 2.7e-14
Identity = 77/170 (45.29%), Postives = 92/170 (54.12%), Query Frame = 0

Query: 42  YYGGAAGAIPFRWESRPGTPK-HTFSDTSIP-PLTPPPSYYSSS-HSTSKASSKPTLLSS 101
           YYGGA  +IPF WESRPGTPK H  SD+S+P PLTPPPSYYSS   ST +  SK     S
Sbjct: 18  YYGGA--SIPFIWESRPGTPKNHLCSDSSLPLPLTPPPSYYSSGILSTPRTQSKVRSKLS 77

Query: 102 IFPWFTPRKSRTPSSFSFSSGSSSSSSSLASWSSSSSSPSPFVRPKFLKRRRCSFDSPSL 161
            F  F+       S    + GS  ++SS  SWSS+SSS S    P    ++R S D  S 
Sbjct: 78  KFLSFSMFSDLRRS----NHGSKKTASSSFSWSSTSSSSSFSSSPPHSLKKRMSHDKKSP 137

Query: 162 PFEYNFDGDEPVGTSDSPTSTLCFGGSSSGRASFFGGCYQLVSVKNALLS 209
               N++ DE      SPTSTLC   S+ GR    G    + SV  AL S
Sbjct: 138 LLYANYEEDE---LRSSPTSTLCC--SNGGR---LGCSSSMGSVTRALFS 173

BLAST of Tan0008546 vs. TAIR 10
Match: AT5G01790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.2 bits (139), Expect = 1.0e-08
Identity = 61/159 (38.36%), Postives = 77/159 (48.43%), Query Frame = 0

Query: 33  SVANSSFRV-YYGGAAGAIPFRWESRPGTPKHTFSD-TSIPPLTPPPSYYSSS----HST 92
           S A  SFR+ YY GAAGA+PF WES PGTPKH  S+  ++PPLTPPPS++S S       
Sbjct: 57  SAACPSFRIYYYDGAAGAVPFEWESHPGTPKHPSSELPTLPPLTPPPSHFSFSGDQIRRR 116

Query: 93  SKASSKP--TLLSSIFPWFTPRKSRTPSSFSFSSGSSSSSSSLASWSSSSSSPSPFVRPK 152
           SK S+K    L+ +   W +   +      S SS  S S   L     +      F   +
Sbjct: 117 SKKSTKKILALIPTRLFWLSGDHNGKAKKLSASSPPSLSERVLI--DENEYDLFKFQTER 176

Query: 153 FLKRRRCSFDSPSLPFEYNFDGDEPVGTSDSPTSTLCFG 184
            + RR  SFDS           D P+  S    ST CFG
Sbjct: 177 NVMRRFSSFDS---------SADYPIQRSQ---STSCFG 201

BLAST of Tan0008546 vs. TAIR 10
Match: AT1G06930.1 (unknown protein; Has 4478 Blast hits to 355 proteins in 82 species: Archae - 0; Bacteria - 29; Metazoa - 379; Fungi - 125; Plants - 120; Viruses - 25; Other Eukaryotes - 3800 (source: NCBI BLink). )

HSP 1 Score: 54.3 bits (129), Expect = 1.4e-07
Identity = 54/133 (40.60%), Postives = 72/133 (54.14%), Query Frame = 0

Query: 42  YYGGAAGAIPFRWESRPGTPK-----------HTFSDTSIP---PLTPPPSYYSSSHSTS 101
           YYGG++ A+PF+WES+PGTP+           ++ SD + P   PLTPPPSY+ +S S++
Sbjct: 24  YYGGSSAAVPFKWESQPGTPRRLSKRSSSSGFNSDSDFNFPVSAPLTPPPSYFYASPSST 83

Query: 102 KASSKPTLLSSIFPWFTPRKSRTPSSFSFSSGSSSSSSSLASWSSSSSS-PSPFVRPKFL 158
           K  S             P+K+ T  S   S   S  SS  +S SSSSSS PS  +R   L
Sbjct: 84  KHVS-------------PKKTNTLFSSLLSKNRSVPSSPASSSSSSSSSVPSSPLRTSDL 143

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_016901982.16.6e-8782.33PREDICTED: putative uncharacterized protein DDB_G0277255 [Cucumis melo] >KAA0052... [more]
XP_011656432.13.3e-8681.39putative protein TPRXL [Cucumis sativus][more]
KAE8646577.11.4e-8481.14hypothetical protein Csa_005771 [Cucumis sativus][more]
XP_038885974.11.8e-8481.82putative protein TPRXL [Benincasa hispida][more]
XP_022134140.13.4e-7574.67putative protein TPRXL [Momordica charantia][more]
Match NameE-valueIdentityDescription
A0A5A7UC513.2e-8782.33Putative serine-rich protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... [more]
A0A1S4E1783.2e-8782.33Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103496610 PE=4 SV=1[more]
A0A0A0K7T81.6e-8681.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014460 PE=4 SV=1[more]
A0A6J1BX951.6e-7574.67Uncharacterized protein OS=Momordica charantia OX=3673 GN=LOC111006479 PE=4 SV=1[more]
A0A6J1K0223.2e-7173.09uncharacterized serine-rich protein C215.13-like OS=Cucurbita maxima OX=3661 GN=... [more]
Match NameE-valueIdentityDescription
AT2G40475.11.8e-1844.44unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G56260.22.7e-1445.29unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G01790.11.0e-0838.36unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G06930.11.4e-0740.60unknown protein; Has 4478 Blast hits to 355 proteins in 82 species: Archae - 0; ... [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..141
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..140
NoneNo IPR availablePANTHERPTHR33257OS05G0165500 PROTEINcoord: 5..198
NoneNo IPR availablePANTHERPTHR33257:SF24EXPRESSED PROTEINcoord: 5..198

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0008546.1Tan0008546.1mRNA