Tan0008451 (gene) Snake gourd v1

Overview


Name	Tan0008451
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	protein LITTLE ZIPPER 1-like
Location	LG07: 69056974 .. 69057390 (-)
RNA-Seq Expression	Tan0008451
Synteny	Tan0008451

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCATCAGTGCAACAGAGAGCATTCTGTTTCATCAAATCCATACTTCCAAGAACAGGAGACGTTTAAAAAGGTCCAAACTTCAAGTTCAGAGGCTTATCAGGTTGCTTTTTTACAAAACCCCATTTCAACTTTTTGATGTTTTTTGGGGGACTTCATTTCATTTGAAAATGATAGGTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTCTGTTTCTGTTTTAGCAGGAGGAGATCATGTGAAGAGAAGCTGGGGAAGGATATTGAGCTGAAGAATCTGCAGCTGTATTTAGAGAATCAGACTATAATTAAAGAGAATGAGAAGCTGAGAGAGAGAGCCAATATCCTTCATCAAGAAAACTTGGCTTTAATGACCGAGTTTCAGAAAAAATTCCCACATTTGGATCAGAGAAAATGA

mRNA sequence

ATGTGCATCAGTGCAACAGAGAGCATTCTGTTTCATCAAATCCATACTTCCAAGAACAGGAGACGTTTAAAAAGGTCCAAACTTCAAGTTCAGAGGCTTATCAGGAGATCATGTGAAGAGAAGCTGGGGAAGGATATTGAGCTGAAGAATCTGCAGCTGTATTTAGAGAATCAGACTATAATTAAAGAGAATGAGAAGCTGAGAGAGAGAGCCAATATCCTTCATCAAGAAAACTTGGCTTTAATGACCGAGTTTCAGAAAAAATTCCCACATTTGGATCAGAGAAAATGA

Coding sequence (CDS)

ATGTGCATCAGTGCAACAGAGAGCATTCTGTTTCATCAAATCCATACTTCCAAGAACAGGAGACGTTTAAAAAGGTCCAAACTTCAAGTTCAGAGGCTTATCAGGAGATCATGTGAAGAGAAGCTGGGGAAGGATATTGAGCTGAAGAATCTGCAGCTGTATTTAGAGAATCAGACTATAATTAAAGAGAATGAGAAGCTGAGAGAGAGAGCCAATATCCTTCATCAAGAAAACTTGGCTTTAATGACCGAGTTTCAGAAAAAATTCCCACATTTGGATCAGAGAAAATGA

Protein sequence

MCISATESILFHQIHTSKNRRRLKRSKLQVQRLIRRSCEEKLGKDIELKNLQLYLENQTIIKENEKLRERANILHQENLALMTEFQKKFPHLDQRK

Homology

[Close]

BLAST of Tan0008451 vs. ExPASy Swiss-Prot
Match: F4IG60 (Protein LITTLE ZIPPER 1 OS=Arabidopsis thaliana OX=3702 GN=ZPR1 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 8.8e-07
Identity = 36/88 (40.91%), Postives = 55/88 (62.50%), Query Frame = 0


Query: 1   MCISATESILFHQIHTSKNRRRLKRSKLQVQRLIRRSCEEKLGKDIELKNLQLYLENQTI 60
           MC+S++E+  F    T        +S +++ RL RR    +  K +E+ NL+LY+ENQ I
Sbjct: 44  MCLSSSET--FSDTPTRLVLYLKTQSHVRIPRLSRRRRMWREEKKMEMINLKLYVENQNI 103

Query: 61  IKENEKLRERANILHQENLALMTEFQKK 89
           I+ENEKL+++A +LHQEN  L +  Q K
Sbjct: 104 IRENEKLKKKALLLHQENKTLFSLLQTK 129

[Close]

BLAST of Tan0008451 vs. ExPASy Swiss-Prot
Match: Q9LZX5 (Protein LITTLE ZIPPER 2 OS=Arabidopsis thaliana OX=3702 GN=ZPR2 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 5.7e-06
Identity = 32/82 (39.02%), Postives = 51/82 (62.20%), Query Frame = 0


Query: 8  SILFHQIHTSKNRRRLKRSKLQVQRLIRRSCEEKLGKDIELKNLQLYLENQTIIKENEKL 67
          S  +H  H SK      ++ L++  L RR    K  K++E++NL+L++ENQ+II+ENE L
Sbjct: 20 SASYHIKHKSKT-----QTHLRILNLTRRRRLLKEQKEMEMRNLKLFVENQSIIRENEAL 79

Query: 68 RERANILHQENLALMTEFQKKF 90
          +++A +LH EN AL      K+
Sbjct: 80 KKKALLLHHENNALFALLHPKY 96

[Close]

BLAST of Tan0008451 vs. NCBI nr
Match: XP_022922429.1 (protein LITTLE ZIPPER 1-like [Cucurbita moschata])

HSP 1 Score: 163.7 bits (413), Expect = 7.9e-37
Identity = 85/96 (88.54%), Postives = 91/96 (94.79%), Query Frame = 0


Query: 1  MCISATESILFHQIHTSKNRRRLKRSKLQVQRLIRRSCEEKLGKDIELKNLQLYLENQTI 60
          MCISAT+SILFHQI TSKNRRR KRSKLQV RL RR CEEKLGKDIELKNLQLYL+NQTI
Sbjct: 1  MCISATQSILFHQIQTSKNRRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTI 60

Query: 61 IKENEKLRERANILHQENLALMTEFQKKFPHLDQRK 97
          IKEN+KLRE+ANILHQEN+ALMTEFQKKFPHL+QRK
Sbjct: 61 IKENDKLREKANILHQENIALMTEFQKKFPHLNQRK 96

[Close]

BLAST of Tan0008451 vs. NCBI nr
Match: KAG6579456.1 (Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016928.1 Protein LITTLE ZIPPER 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 160.6 bits (405), Expect = 6.7e-36
Identity = 83/96 (86.46%), Postives = 90/96 (93.75%), Query Frame = 0


Query: 1  MCISATESILFHQIHTSKNRRRLKRSKLQVQRLIRRSCEEKLGKDIELKNLQLYLENQTI 60
          MCI AT+SILFHQI TSKN+RR KRSKLQV RL RR CEEKLGKDIELKNLQLYL+NQTI
Sbjct: 1  MCIRATQSILFHQIQTSKNKRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTI 60

Query: 61 IKENEKLRERANILHQENLALMTEFQKKFPHLDQRK 97
          IKEN+KLRE+ANILHQEN+ALMTEFQKKFPHL+QRK
Sbjct: 61 IKENDKLREKANILHQENIALMTEFQKKFPHLNQRK 96

[Close]

BLAST of Tan0008451 vs. NCBI nr
Match: XP_023534553.1 (protein LITTLE ZIPPER 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 159.5 bits (402), Expect = 1.5e-35
Identity = 86/97 (88.66%), Postives = 90/97 (92.78%), Query Frame = 0


Query: 1  MCISATESILFHQIHTSKNRRRLKRSKLQVQRLI-RRSCEEKLGKDIELKNLQLYLENQT 60
          MCI+AT+ ILFHQIHTSKNRRRLKRSKLQVQRL  RRS EEK GKDIELKNLQLYLENQT
Sbjct: 1  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSRRRSFEEKQGKDIELKNLQLYLENQT 60

Query: 61 IIKENEKLRERANILHQENLALMTEFQKKFPHLDQRK 97
          II+ENEKLRE+ANILHQENLALMTEF KKFPH DQRK
Sbjct: 61 IIEENEKLREKANILHQENLALMTEFHKKFPHFDQRK 97

[Close]

BLAST of Tan0008451 vs. NCBI nr
Match: KAG7036101.1 (Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 159.1 bits (401), Expect = 1.9e-35
Identity = 86/98 (87.76%), Postives = 90/98 (91.84%), Query Frame = 0


Query: 1  MCISATESILFHQIHTSKNRRRLKRSKLQVQRLI--RRSCEEKLGKDIELKNLQLYLENQ 60
          MCI+AT+ ILFHQIHTSKNRRRLKRSKLQVQRL   RRS EEK GKDIELKNLQLYLENQ
Sbjct: 1  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSSRRRSFEEKQGKDIELKNLQLYLENQ 60

Query: 61 TIIKENEKLRERANILHQENLALMTEFQKKFPHLDQRK 97
          TII+ENEKLRE+ANILHQENLALMTEF KKFPH DQRK
Sbjct: 61 TIIEENEKLREKANILHQENLALMTEFHKKFPHFDQRK 98

[Close]

BLAST of Tan0008451 vs. NCBI nr
Match: XP_022159679.1 (protein LITTLE ZIPPER 2-like isoform X1 [Momordica charantia])

HSP 1 Score: 156.8 bits (395), Expect = 9.6e-35
Identity = 85/95 (89.47%), Postives = 88/95 (92.63%), Query Frame = 0


Query: 1   MCISATESILFHQIHTSKNRRRLKRSKLQVQRLIRRSC-EEKLGKDIELKNLQLYLENQT 60
           MCISATES  FHQIHTSKNRRRLKRSKLQVQRL RR C EEK+GKDIELKNLQLYLENQT
Sbjct: 17  MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLTRRRCTEEKVGKDIELKNLQLYLENQT 76

Query: 61  IIKENEKLRERANILHQENLALMTEFQKKFPHLDQ 95
           II+ENEKLRERANILHQENLALMTE QKKF HLD+
Sbjct: 77  IIEENEKLRERANILHQENLALMTELQKKFQHLDR 111

[Close]

BLAST of Tan0008451 vs. ExPASy TrEMBL
Match: A0A6J1E3C5 (protein LITTLE ZIPPER 1-like OS=Cucurbita moschata OX=3662 GN=LOC111430426 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 3.8e-37
Identity = 85/96 (88.54%), Postives = 91/96 (94.79%), Query Frame = 0


Query: 1  MCISATESILFHQIHTSKNRRRLKRSKLQVQRLIRRSCEEKLGKDIELKNLQLYLENQTI 60
          MCISAT+SILFHQI TSKNRRR KRSKLQV RL RR CEEKLGKDIELKNLQLYL+NQTI
Sbjct: 1  MCISATQSILFHQIQTSKNRRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTI 60

Query: 61 IKENEKLRERANILHQENLALMTEFQKKFPHLDQRK 97
          IKEN+KLRE+ANILHQEN+ALMTEFQKKFPHL+QRK
Sbjct: 61 IKENDKLREKANILHQENIALMTEFQKKFPHLNQRK 96

[Close]

BLAST of Tan0008451 vs. ExPASy TrEMBL
Match: A0A6J1E319 (protein LITTLE ZIPPER 2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111026023 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 4.7e-35
Identity = 85/95 (89.47%), Postives = 88/95 (92.63%), Query Frame = 0


Query: 1   MCISATESILFHQIHTSKNRRRLKRSKLQVQRLIRRSC-EEKLGKDIELKNLQLYLENQT 60
           MCISATES  FHQIHTSKNRRRLKRSKLQVQRL RR C EEK+GKDIELKNLQLYLENQT
Sbjct: 17  MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLTRRRCTEEKVGKDIELKNLQLYLENQT 76

Query: 61  IIKENEKLRERANILHQENLALMTEFQKKFPHLDQ 95
           II+ENEKLRERANILHQENLALMTE QKKF HLD+
Sbjct: 77  IIEENEKLRERANILHQENLALMTELQKKFQHLDR 111

[Close]

BLAST of Tan0008451 vs. ExPASy TrEMBL
Match: A0A0A0KKF8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G157390 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.3e-34
Identity = 79/96 (82.29%), Postives = 87/96 (90.62%), Query Frame = 0


Query: 1  MCISATESILFHQIHTSKNRRRLKRSKLQVQRLIRRSCEEKLGKDIELKNLQLYLENQTI 60
          MC+SAT+S+LFH I +SKNRR  KRS  QV RL RR CEEKLGKDIELKNLQLYLENQTI
Sbjct: 1  MCVSATQSVLFHTIQSSKNRRSSKRSNFQVLRLTRRRCEEKLGKDIELKNLQLYLENQTI 60

Query: 61 IKENEKLRERANILHQENLALMTEFQKKFPHLDQRK 97
          I+ENEKLRE+ANILHQENLAL+TEFQKKFPHL+QRK
Sbjct: 61 IEENEKLREKANILHQENLALLTEFQKKFPHLEQRK 96

[Close]

BLAST of Tan0008451 vs. ExPASy TrEMBL
Match: A0A6J1DZF5 (protein LITTLE ZIPPER 2-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111026023 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 8.8e-34
Identity = 84/96 (87.50%), Postives = 87/96 (90.62%), Query Frame = 0


Query: 1   MCISATESILFHQIHTSKNRRRLKRSKLQVQRLI--RRSCEEKLGKDIELKNLQLYLENQ 60
           MCISATES  FHQIHTSKNRRRLKRSKLQVQRL   RR  EEK+GKDIELKNLQLYLENQ
Sbjct: 17  MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLTSRRRCTEEKVGKDIELKNLQLYLENQ 76

Query: 61  TIIKENEKLRERANILHQENLALMTEFQKKFPHLDQ 95
           TII+ENEKLRERANILHQENLALMTE QKKF HLD+
Sbjct: 77  TIIEENEKLRERANILHQENLALMTELQKKFQHLDR 112

[Close]

BLAST of Tan0008451 vs. ExPASy TrEMBL
Match: A0A2I4DJA4 (protein LITTLE ZIPPER 1-like isoform X2 OS=Juglans regia OX=51240 GN=LOC108980679 PE=4 SV=2)

HSP 1 Score: 112.5 bits (280), Expect = 1.0e-21
Identity = 56/93 (60.22%), Postives = 76/93 (81.72%), Query Frame = 0


Query: 1  MCISATESILFHQIHTSKNRRRLKRSKLQVQRLIRRSCEEKLGKDIELKNLQLYLENQTI 60
          MC + TE +    +H+S+ ++R KRSK+QV R +R+ CEEK  KD+ELKNL+L+LENQ+I
Sbjct: 1  MCTNNTEKLPSGLVHSSERKQRSKRSKVQVPRRVRKKCEEKADKDMELKNLKLFLENQSI 60

Query: 61 IKENEKLRERANILHQENLALMTEFQKKFPHLD 94
          I+ENEKLR++A++LHQENLALM+EFQ KFP  D
Sbjct: 61 IEENEKLRKKASVLHQENLALMSEFQNKFPDSD 93

[Close]

BLAST of Tan0008451 vs. TAIR 10
Match: AT2G45450.1 (protein binding )

HSP 1 Score: 54.3 bits (129), Expect = 6.3e-08
Identity = 36/88 (40.91%), Postives = 55/88 (62.50%), Query Frame = 0


Query: 1   MCISATESILFHQIHTSKNRRRLKRSKLQVQRLIRRSCEEKLGKDIELKNLQLYLENQTI 60
           MC+S++E+  F    T        +S +++ RL RR    +  K +E+ NL+LY+ENQ I
Sbjct: 44  MCLSSSET--FSDTPTRLVLYLKTQSHVRIPRLSRRRRMWREEKKMEMINLKLYVENQNI 103

Query: 61  IKENEKLRERANILHQENLALMTEFQKK 89
           I+ENEKL+++A +LHQEN  L +  Q K
Sbjct: 104 IRENEKLKKKALLLHQENKTLFSLLQTK 129

[Close]

BLAST of Tan0008451 vs. TAIR 10
Match: AT3G60890.1 (protein binding )

HSP 1 Score: 51.6 bits (122), Expect = 4.1e-07
Identity = 32/82 (39.02%), Postives = 51/82 (62.20%), Query Frame = 0


Query: 8  SILFHQIHTSKNRRRLKRSKLQVQRLIRRSCEEKLGKDIELKNLQLYLENQTIIKENEKL 67
          S  +H  H SK      ++ L++  L RR    K  K++E++NL+L++ENQ+II+ENE L
Sbjct: 20 SASYHIKHKSKT-----QTHLRILNLTRRRRLLKEQKEMEMRNLKLFVENQSIIRENEAL 79

Query: 68 RERANILHQENLALMTEFQKKF 90
          +++A +LH EN AL      K+
Sbjct: 80 KKKALLLHHENNALFALLHPKY 96

[Close]

BLAST of Tan0008451 vs. TAIR 10
Match: AT3G60890.2 (protein binding )

HSP 1 Score: 50.8 bits (120), Expect = 6.9e-07
Identity = 33/82 (40.24%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 8  SILFHQIHTSKNRRRLKRSKLQVQRLIRRSCEEKLGKDIELKNLQLYLENQTIIKENEKL 67
          S  +H  H SK +  L+   L  +R  RR  +E+  K++E++NL+L++ENQ+II+ENE L
Sbjct: 20 SASYHIKHKSKTQTHLRILNLTSRR--RRLLKEQ--KEMEMRNLKLFVENQSIIRENEAL 79

Query: 68 RERANILHQENLALMTEFQKKF 90
          +++A +LH EN AL      K+
Sbjct: 80 KKKALLLHHENNALFALLHPKY 97

The following BLAST results are available for this feature:

BLAST of Tan0008451 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IG60	8.8e-07	40.91	Protein LITTLE ZIPPER 1 OS=Arabidopsis thaliana OX=3702 GN=ZPR1 PE=1 SV=1	[more]
Q9LZX5	5.7e-06	39.02	Protein LITTLE ZIPPER 2 OS=Arabidopsis thaliana OX=3702 GN=ZPR2 PE=1 SV=1	[more]

BLAST of Tan0008451 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022922429.1	7.9e-37	88.54	protein LITTLE ZIPPER 1-like [Cucurbita moschata]	[more]
KAG6579456.1	6.7e-36	86.46	Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG701...	[more]
XP_023534553.1	1.5e-35	88.66	protein LITTLE ZIPPER 2-like [Cucurbita pepo subsp. pepo]	[more]
KAG7036101.1	1.9e-35	87.76	Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022159679.1	9.6e-35	89.47	protein LITTLE ZIPPER 2-like isoform X1 [Momordica charantia]	[more]

BLAST of Tan0008451 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E3C5	3.8e-37	88.54	protein LITTLE ZIPPER 1-like OS=Cucurbita moschata OX=3662 GN=LOC111430426 PE=4 ...	[more]
A0A6J1E319	4.7e-35	89.47	protein LITTLE ZIPPER 2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A0A0KKF8	2.3e-34	82.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G157390 PE=4 SV=1	[more]
A0A6J1DZF5	8.8e-34	87.50	protein LITTLE ZIPPER 2-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A2I4DJA4	1.0e-21	60.22	protein LITTLE ZIPPER 1-like isoform X2 OS=Juglans regia OX=51240 GN=LOC10898067...	[more]

BLAST of Tan0008451 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45450.1	6.3e-08	40.91	protein binding	[more]
AT3G60890.1	4.1e-07	39.02	protein binding	[more]
AT3G60890.2	6.9e-07	40.24	protein binding	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 57..84
None	No IPR available	PANTHER	PTHR33601:SF21	OS09G0520500 PROTEIN	coord: 1..94
IPR039312	Protein LITTLE ZIPPER	PANTHER	PTHR33601	PROTEIN LITTLE ZIPPER 4	coord: 1..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0008451.1	Tan0008451.1	mRNA