Tan0008411 (gene) Snake gourd v1

Overview


Name	Tan0008411
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Plastocyanin
Location	LG01: 116137771 .. 116138749 (-)
RNA-Seq Expression	Tan0008411
Synteny	Tan0008411

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCACTCCCAATCTCAAAACCACACAAATTCAATTCAATTCAATTCAATCTCTCTCCCCTTCATTATAAACCACTTTCCCTCTCTTCCCCTTCTTTCATTTCAACCAAATTCCCCACACACTCTAAAACTCTCCTCCCATGGCCGCCGTCACCTCCGCCGCCGTCGCTATCCCCTCCTTCACCGGCCTTAAATCCTCCGCCTCCACCAAACCCGCCGCCGCCGTCCGCGTCTCCTCCCCCGCCGCCCCCAAGCTCACCATCAGAGCCTCTCTCAAGGACCTGGGCTTGGCCGTTGCCGCCACCGCCGCCAGCGCGCTCCTCGCCACCAACGCCTTAGCCATCGAGGTCAAGCTCGGCGGCGACGACGGATCTCTGGTCTTCGACCCCAAAGAATTCTCGGTGGCCTCCGGTGAGGCCATCGTGTTCAAGAACAACGCCGGATTCCCACACAACATCGTGTTCGACGAGGACGAAATCCCGAGCGGAGTGGACGCCAGTAAGATCTCGATGAGCGAGGAAGATCTTCTGAATGCTCCCGGCGAGATCTACGAGGTTAAGCTCACTGAAAAAGGAAGCTACTCCTTCTACTGTTCGCCGCATCAAGGAGCTGGAATGGTCGGAAAAGTCACCGTTAACTGATGATTAAATTCCGTCTTTCATTTTTTCTCTGTAATGTTCTTGAAATTAAGTTCAACGTGTTCGGTTTTTCCGTTCTATTGAGAGACTGTATGCTGTAGAGCTTTCAGAATTCAATTCACCGTATATGAGATTGAGATAAACCACTAATAATAACGTAATGTAATGGATGTGTTCTCTGTTCTCCGTGGGCTTTCTTTTAGGCCCATTTGCGATTTATGGTCCAATTGCAAGTATCCGGTAAATGGGTTTTTTTCTTCTCCAAACTGGCCCAATTGTTAAGTTGGACTACTTACTACTATAAATCATTGTTATATTTGGCTCTGATGCACTTTCATTAATG

mRNA sequence

TCCACTCCCAATCTCAAAACCACACAAATTCAATTCAATTCAATTCAATCTCTCTCCCCTTCATTATAAACCACTTTCCCTCTCTTCCCCTTCTTTCATTTCAACCAAATTCCCCACACACTCTAAAACTCTCCTCCCATGGCCGCCGTCACCTCCGCCGCCGTCGCTATCCCCTCCTTCACCGGCCTTAAATCCTCCGCCTCCACCAAACCCGCCGCCGCCGTCCGCGTCTCCTCCCCCGCCGCCCCCAAGCTCACCATCAGAGCCTCTCTCAAGGACCTGGGCTTGGCCGTTGCCGCCACCGCCGCCAGCGCGCTCCTCGCCACCAACGCCTTAGCCATCGAGGTCAAGCTCGGCGGCGACGACGGATCTCTGGTCTTCGACCCCAAAGAATTCTCGGTGGCCTCCGGTGAGGCCATCGTGTTCAAGAACAACGCCGGATTCCCACACAACATCGTGTTCGACGAGGACGAAATCCCGAGCGGAGTGGACGCCAGTAAGATCTCGATGAGCGAGGAAGATCTTCTGAATGCTCCCGGCGAGATCTACGAGGTTAAGCTCACTGAAAAAGGAAGCTACTCCTTCTACTGTTCGCCGCATCAAGGAGCTGGAATGGTCGGAAAAGTCACCGTTAACTGATGATTAAATTCCGTCTTTCATTTTTTCTCTGTAATGTTCTTGAAATTAAGTTCAACGTGTTCGGTTTTTCCGTTCTATTGAGAGACTGTATGCTGTAGAGCTTTCAGAATTCAATTCACCGTATATGAGATTGAGATAAACCACTAATAATAACGTAATGTAATGGATGTGTTCTCTGTTCTCCGTGGGCTTTCTTTTAGGCCCATTTGCGATTTATGGTCCAATTGCAAGTATCCGGTAAATGGGTTTTTTTCTTCTCCAAACTGGCCCAATTGTTAAGTTGGACTACTTACTACTATAAATCATTGTTATATTTGGCTCTGATGCACTTTCATTAATG

Coding sequence (CDS)

ATGGCCGCCGTCACCTCCGCCGCCGTCGCTATCCCCTCCTTCACCGGCCTTAAATCCTCCGCCTCCACCAAACCCGCCGCCGCCGTCCGCGTCTCCTCCCCCGCCGCCCCCAAGCTCACCATCAGAGCCTCTCTCAAGGACCTGGGCTTGGCCGTTGCCGCCACCGCCGCCAGCGCGCTCCTCGCCACCAACGCCTTAGCCATCGAGGTCAAGCTCGGCGGCGACGACGGATCTCTGGTCTTCGACCCCAAAGAATTCTCGGTGGCCTCCGGTGAGGCCATCGTGTTCAAGAACAACGCCGGATTCCCACACAACATCGTGTTCGACGAGGACGAAATCCCGAGCGGAGTGGACGCCAGTAAGATCTCGATGAGCGAGGAAGATCTTCTGAATGCTCCCGGCGAGATCTACGAGGTTAAGCTCACTGAAAAAGGAAGCTACTCCTTCTACTGTTCGCCGCATCAAGGAGCTGGAATGGTCGGAAAAGTCACCGTTAACTGA

Protein sequence

MAAVTSAAVAIPSFTGLKSSASTKPAAAVRVSSPAAPKLTIRASLKDLGLAVAATAASALLATNALAIEVKLGGDDGSLVFDPKEFSVASGEAIVFKNNAGFPHNIVFDEDEIPSGVDASKISMSEEDLLNAPGEIYEVKLTEKGSYSFYCSPHQGAGMVGKVTVN

Homology

[Close]

BLAST of Tan0008411 vs. ExPASy Swiss-Prot
Match: P00299 (Plastocyanin A, chloroplastic OS=Populus nigra OX=3691 GN=PETE PE=1 SV=2)

HSP 1 Score: 229.6 bits (584), Expect = 2.7e-59
Identity = 122/168 (72.62%), Postives = 144/168 (85.71%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLK--SSASTKPAAAVRVSSPAAPKLTIRASLKDLGLAVAATAAS 60
           MA VTSAAV+IPSFTGLK  S+++ K +A+ +VS+   P+L+I+AS+KD+G AV ATAAS
Sbjct: 1   MATVTSAAVSIPSFTGLKAGSASNAKVSASAKVSASPLPRLSIKASMKDVGAAVVATAAS 60

Query: 61  ALLATNALAIEVKLGGDDGSLVFDPKEFSVASGEAIVFKNNAGFPHNIVFDEDEIPSGVD 120
           A++A+NA+AI+V LG DDGSL F P EFS++ GE IVFKNNAGFPHNIVFDED IPSGVD
Sbjct: 61  AMIASNAMAIDVLLGADDGSLAFVPSEFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVD 120

Query: 121 ASKISMSEEDLLNAPGEIYEVKLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           ASKISMSEEDLLNA GE +EV L+ KG YSFYCSPHQGAGMVGKVTVN
Sbjct: 121 ASKISMSEEDLLNAKGETFEVALSNKGEYSFYCSPHQGAGMVGKVTVN 168

[Close]

BLAST of Tan0008411 vs. ExPASy Swiss-Prot
Match: P00289 (Plastocyanin, chloroplastic OS=Spinacia oleracea OX=3562 GN=PETE PE=1 SV=2)

HSP 1 Score: 229.2 bits (583), Expect = 3.5e-59
Identity = 124/168 (73.81%), Postives = 144/168 (85.71%), Query Frame = 0


Query: 1   MAAV-TSAAVAIPSFTGLKSSASTKPAAA-VRVSSPAAPKLTIRASLKDLGLAVAATAAS 60
           MA V +SAAVA+PSFTGLK+S S KP  A +  ++ A P+L+++ASLK++G AV ATAA+
Sbjct: 1   MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60

Query: 61  ALLATNALAIEVKLGGDDGSLVFDPKEFSVASGEAIVFKNNAGFPHNIVFDEDEIPSGVD 120
            LLA NA+A+EV LGG DGSL F P +FSVASGE IVFKNNAGFPHN+VFDEDEIPSGVD
Sbjct: 61  GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD 120

Query: 121 ASKISMSEEDLLNAPGEIYEVKLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           A+KISMSEEDLLNAPGE Y+V LTEKG+Y FYCSPHQGAGMVGKVTVN
Sbjct: 121 AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 168

[Close]

BLAST of Tan0008411 vs. ExPASy Swiss-Prot
Match: P17340 (Plastocyanin, chloroplastic OS=Solanum lycopersicum OX=4081 GN=PETE PE=2 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 2.9e-58
Identity = 120/170 (70.59%), Postives = 142/170 (83.53%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSAST----KPAAAVRVSSPAAPKLTIRASLKDLGLAVAATA 60
           MA VTSAAVAIPSFTGLK+ AS+       A+ +V++    +LT++ASLKD+G  VAATA
Sbjct: 1   MATVTSAAVAIPSFTGLKAGASSSSRVSTGASAKVAAAPVARLTVKASLKDVGAVVAATA 60

Query: 61  ASALLATNALAIEVKLGGDDGSLVFDPKEFSVASGEAIVFKNNAGFPHNIVFDEDEIPSG 120
            SA+LA+NA+A+EV LGGDDGSL F P  FSV++GE I FKNNAGFPHN+VFDEDEIP+G
Sbjct: 61  VSAMLASNAMALEVLLGGDDGSLAFIPGNFSVSAGEKITFKNNAGFPHNVVFDEDEIPAG 120

Query: 121 VDASKISMSEEDLLNAPGEIYEVKLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           VDASKISMSEEDLLNA GE Y V L+EKG+Y+FYC+PHQGAGMVGKVTVN
Sbjct: 121 VDASKISMSEEDLLNAAGETYSVTLSEKGTYTFYCAPHQGAGMVGKVTVN 170

[Close]

BLAST of Tan0008411 vs. ExPASy Swiss-Prot
Match: P11970 (Plastocyanin B, chloroplastic OS=Populus nigra OX=3691 GN=PETE PE=1 SV=2)

HSP 1 Score: 223.8 bits (569), Expect = 1.5e-57
Identity = 117/168 (69.64%), Postives = 144/168 (85.71%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLK--SSASTKPAAAVRVSSPAAPKLTIRASLKDLGLAVAATAAS 60
           MAAVTSAAV+IPSFTGLK  S+++ K +A+ +VS+   P+L+I+ASLK++G AV ATAAS
Sbjct: 1   MAAVTSAAVSIPSFTGLKAASASNAKVSASAKVSASPLPRLSIKASLKEVGAAVVATAAS 60

Query: 61  ALLATNALAIEVKLGGDDGSLVFDPKEFSVASGEAIVFKNNAGFPHNIVFDEDEIPSGVD 120
           A++A+NA+A++V LG DDGSL F P EFSV +GE IVFKNNAGFPHN++FDED +PSGVD
Sbjct: 61  AMIASNAMAVDVLLGADDGSLAFVPSEFSVPAGEKIVFKNNAGFPHNVLFDEDAVPSGVD 120

Query: 121 ASKISMSEEDLLNAPGEIYEVKLTEKGSYSFYCSPHQGAGMVGKVTVN 167
            SKISMSEEDLLNA GE +EV L++KG Y+FYCSPHQGAGMVGKV VN
Sbjct: 121 VSKISMSEEDLLNAKGETFEVALSDKGEYTFYCSPHQGAGMVGKVIVN 168

[Close]

BLAST of Tan0008411 vs. ExPASy Swiss-Prot
Match: P16002 (Plastocyanin, chloroplastic OS=Pisum sativum OX=3888 GN=PETE PE=3 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 9.4e-57
Identity = 116/168 (69.05%), Postives = 138/168 (82.14%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSASTKPAAAVRV--SSPAAPKLTIRASLKDLGLAVAATAAS 60
           MA VTS  VAIPSF+GLK++A+TK +A  ++  S+  +P+L +RASLKD G+A+ ATAAS
Sbjct: 1   MATVTSTTVAIPSFSGLKTNAATKVSAMAKIPTSTSQSPRLCVRASLKDFGVALVATAAS 60

Query: 61  ALLATNALAIEVKLGGDDGSLVFDPKEFSVASGEAIVFKNNAGFPHNIVFDEDEIPSGVD 120
           A+LA+NALA+EV LG  DG L F P    V++GE IVFKNNAGFPHN+VFDEDEIP+GVD
Sbjct: 61  AVLASNALAVEVLLGASDGGLAFVPSSLEVSAGETIVFKNNAGFPHNVVFDEDEIPAGVD 120

Query: 121 ASKISMSEEDLLNAPGEIYEVKLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           ASKISM EEDLLNAPGE Y VKL  KG+Y FYCSPHQGAGMVG+VTVN
Sbjct: 121 ASKISMPEEDLLNAPGETYSVKLDAKGTYKFYCSPHQGAGMVGQVTVN 168

[Close]

BLAST of Tan0008411 vs. NCBI nr
Match: XP_008466451.1 (PREDICTED: plastocyanin [Cucumis melo] >TYK31457.1 plastocyanin [Cucumis melo var. makuwa])

HSP 1 Score: 268.1 bits (684), Expect = 5.1e-68
Identity = 138/166 (83.13%), Postives = 156/166 (93.98%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSASTKPAAAVRVSSPAAPKLTIRASLKDLGLAVAATAASAL 60
           MAAVTSAAVAIPSFTGLKSS+S+KP +A+R+ SPA+PKL++RASLKD+G+AVAATAASAL
Sbjct: 1   MAAVTSAAVAIPSFTGLKSSSSSKPTSAIRLPSPASPKLSVRASLKDVGVAVAATAASAL 60

Query: 61  LATNALAIEVKLGGDDGSLVFDPKEFSVASGEAIVFKNNAGFPHNIVFDEDEIPSGVDAS 120
           LA+NA+AIE+ LGGDDGSL F P  F+VASGE IVFKNNAGFPHN+VFDEDEIPSGVDA 
Sbjct: 61  LASNAMAIEILLGGDDGSLAFVPNNFTVASGETIVFKNNAGFPHNVVFDEDEIPSGVDAG 120

Query: 121 KISMSEEDLLNAPGEIYEVKLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           KISM EE+LLNAPGE+YEV+LTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]

BLAST of Tan0008411 vs. NCBI nr
Match: KAA0063319.1 (plastocyanin [Cucumis melo var. makuwa])

HSP 1 Score: 267.7 bits (683), Expect = 6.7e-68
Identity = 138/166 (83.13%), Postives = 156/166 (93.98%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSASTKPAAAVRVSSPAAPKLTIRASLKDLGLAVAATAASAL 60
           MAAVTSAAVAIPSFTGLKSS+S+KP +A+R+ SPA+PKL++RASLKD+G+AVAATAASAL
Sbjct: 1   MAAVTSAAVAIPSFTGLKSSSSSKPTSAIRLPSPASPKLSVRASLKDVGVAVAATAASAL 60

Query: 61  LATNALAIEVKLGGDDGSLVFDPKEFSVASGEAIVFKNNAGFPHNIVFDEDEIPSGVDAS 120
           LA+NA+AIE+ LGGDDGSL F P  F+VASGE IVFKNNAGFPHN+VFDEDEIPSGVDA 
Sbjct: 61  LASNAMAIEILLGGDDGSLAFVPNNFTVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDAG 120

Query: 121 KISMSEEDLLNAPGEIYEVKLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           KISM EE+LLNAPGE+YEV+LTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]

BLAST of Tan0008411 vs. NCBI nr
Match: XP_022937324.1 (plastocyanin [Cucurbita moschata])

HSP 1 Score: 266.9 bits (681), Expect = 1.1e-67
Identity = 142/167 (85.03%), Postives = 154/167 (92.22%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSA-STKPAAAVRVSSPAAPKLTIRASLKDLGLAVAATAASA 60
           MA VTSA VAIP+FTGLKS A ++KP AAVRVSSPA PKLT+RASLKD+G+AVAATAASA
Sbjct: 1   MATVTSATVAIPTFTGLKSPATASKPTAAVRVSSPAVPKLTVRASLKDIGVAVAATAASA 60

Query: 61  LLATNALAIEVKLGGDDGSLVFDPKEFSVASGEAIVFKNNAGFPHNIVFDEDEIPSGVDA 120
           LLA+NALAIEV LGGDDGSL F P +FSVA+GE IVFKNNAGFPHN+VFDEDEIPSGVDA
Sbjct: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 SKISMSEEDLLNAPGEIYEVKLTEKGSYSFYCSPHQGAGMVGKVTVN 167
            KISM+EEDLLNAPGE+YEV LTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 167

[Close]

BLAST of Tan0008411 vs. NCBI nr
Match: XP_023534891.1 (plastocyanin [Cucurbita pepo subsp. pepo])

HSP 1 Score: 266.5 bits (680), Expect = 1.5e-67
Identity = 143/167 (85.63%), Postives = 154/167 (92.22%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSA-STKPAAAVRVSSPAAPKLTIRASLKDLGLAVAATAASA 60
           MA VTSA VAIPSFTGLKSSA ++K  AAVRVSSPA PKLT+RASLKD+G+AVAATAASA
Sbjct: 1   MATVTSATVAIPSFTGLKSSATASKSTAAVRVSSPAVPKLTVRASLKDVGVAVAATAASA 60

Query: 61  LLATNALAIEVKLGGDDGSLVFDPKEFSVASGEAIVFKNNAGFPHNIVFDEDEIPSGVDA 120
           LLA+NALAIEV LGGDDGSL F P +FSVA+GE IVFKNNAGFPHN+VFDEDEIPSGVDA
Sbjct: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 SKISMSEEDLLNAPGEIYEVKLTEKGSYSFYCSPHQGAGMVGKVTVN 167
            KISM+EEDLLNAPGE+YEV LTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 167

[Close]

BLAST of Tan0008411 vs. NCBI nr
Match: XP_022976282.1 (plastocyanin [Cucurbita maxima])

HSP 1 Score: 265.4 bits (677), Expect = 3.3e-67
Identity = 142/167 (85.03%), Postives = 154/167 (92.22%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSA-STKPAAAVRVSSPAAPKLTIRASLKDLGLAVAATAASA 60
           MA VTSA VAIPSFTGLK+SA ++K  AAVRVSSP+ PKLT+RASLKDLG+AVAATAASA
Sbjct: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60

Query: 61  LLATNALAIEVKLGGDDGSLVFDPKEFSVASGEAIVFKNNAGFPHNIVFDEDEIPSGVDA 120
           LLA+NALAIEV LGGDDGSL F P +FSVA+GE IVFKNNAGFPHN+VFDEDEIPSGVDA
Sbjct: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 SKISMSEEDLLNAPGEIYEVKLTEKGSYSFYCSPHQGAGMVGKVTVN 167
            KISM+EEDLLNAPGE+YEV LTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 167

[Close]

BLAST of Tan0008411 vs. ExPASy TrEMBL
Match: A0A5D3E5P8 (Plastocyanin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007720 PE=3 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 2.5e-68
Identity = 138/166 (83.13%), Postives = 156/166 (93.98%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSASTKPAAAVRVSSPAAPKLTIRASLKDLGLAVAATAASAL 60
           MAAVTSAAVAIPSFTGLKSS+S+KP +A+R+ SPA+PKL++RASLKD+G+AVAATAASAL
Sbjct: 1   MAAVTSAAVAIPSFTGLKSSSSSKPTSAIRLPSPASPKLSVRASLKDVGVAVAATAASAL 60

Query: 61  LATNALAIEVKLGGDDGSLVFDPKEFSVASGEAIVFKNNAGFPHNIVFDEDEIPSGVDAS 120
           LA+NA+AIE+ LGGDDGSL F P  F+VASGE IVFKNNAGFPHN+VFDEDEIPSGVDA 
Sbjct: 61  LASNAMAIEILLGGDDGSLAFVPNNFTVASGETIVFKNNAGFPHNVVFDEDEIPSGVDAG 120

Query: 121 KISMSEEDLLNAPGEIYEVKLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           KISM EE+LLNAPGE+YEV+LTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]

BLAST of Tan0008411 vs. ExPASy TrEMBL
Match: A0A1S3CRA6 (Plastocyanin OS=Cucumis melo OX=3656 GN=LOC103503851 PE=3 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 2.5e-68
Identity = 138/166 (83.13%), Postives = 156/166 (93.98%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSASTKPAAAVRVSSPAAPKLTIRASLKDLGLAVAATAASAL 60
           MAAVTSAAVAIPSFTGLKSS+S+KP +A+R+ SPA+PKL++RASLKD+G+AVAATAASAL
Sbjct: 1   MAAVTSAAVAIPSFTGLKSSSSSKPTSAIRLPSPASPKLSVRASLKDVGVAVAATAASAL 60

Query: 61  LATNALAIEVKLGGDDGSLVFDPKEFSVASGEAIVFKNNAGFPHNIVFDEDEIPSGVDAS 120
           LA+NA+AIE+ LGGDDGSL F P  F+VASGE IVFKNNAGFPHN+VFDEDEIPSGVDA 
Sbjct: 61  LASNAMAIEILLGGDDGSLAFVPNNFTVASGETIVFKNNAGFPHNVVFDEDEIPSGVDAG 120

Query: 121 KISMSEEDLLNAPGEIYEVKLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           KISM EE+LLNAPGE+YEV+LTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]

BLAST of Tan0008411 vs. ExPASy TrEMBL
Match: A0A5A7VCJ5 (Plastocyanin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G001440 PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.2e-68
Identity = 138/166 (83.13%), Postives = 156/166 (93.98%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSASTKPAAAVRVSSPAAPKLTIRASLKDLGLAVAATAASAL 60
           MAAVTSAAVAIPSFTGLKSS+S+KP +A+R+ SPA+PKL++RASLKD+G+AVAATAASAL
Sbjct: 1   MAAVTSAAVAIPSFTGLKSSSSSKPTSAIRLPSPASPKLSVRASLKDVGVAVAATAASAL 60

Query: 61  LATNALAIEVKLGGDDGSLVFDPKEFSVASGEAIVFKNNAGFPHNIVFDEDEIPSGVDAS 120
           LA+NA+AIE+ LGGDDGSL F P  F+VASGE IVFKNNAGFPHN+VFDEDEIPSGVDA 
Sbjct: 61  LASNAMAIEILLGGDDGSLAFVPNNFTVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDAG 120

Query: 121 KISMSEEDLLNAPGEIYEVKLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           KISM EE+LLNAPGE+YEV+LTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]

BLAST of Tan0008411 vs. ExPASy TrEMBL
Match: A0A6J1FAV0 (Plastocyanin OS=Cucurbita moschata OX=3662 GN=LOC111443648 PE=3 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 5.5e-68
Identity = 142/167 (85.03%), Postives = 154/167 (92.22%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSA-STKPAAAVRVSSPAAPKLTIRASLKDLGLAVAATAASA 60
           MA VTSA VAIP+FTGLKS A ++KP AAVRVSSPA PKLT+RASLKD+G+AVAATAASA
Sbjct: 1   MATVTSATVAIPTFTGLKSPATASKPTAAVRVSSPAVPKLTVRASLKDIGVAVAATAASA 60

Query: 61  LLATNALAIEVKLGGDDGSLVFDPKEFSVASGEAIVFKNNAGFPHNIVFDEDEIPSGVDA 120
           LLA+NALAIEV LGGDDGSL F P +FSVA+GE IVFKNNAGFPHN+VFDEDEIPSGVDA
Sbjct: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 SKISMSEEDLLNAPGEIYEVKLTEKGSYSFYCSPHQGAGMVGKVTVN 167
            KISM+EEDLLNAPGE+YEV LTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 167

[Close]

BLAST of Tan0008411 vs. ExPASy TrEMBL
Match: A0A6J1IFB6 (Plastocyanin OS=Cucurbita maxima OX=3661 GN=LOC111476724 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.6e-67
Identity = 142/167 (85.03%), Postives = 154/167 (92.22%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSA-STKPAAAVRVSSPAAPKLTIRASLKDLGLAVAATAASA 60
           MA VTSA VAIPSFTGLK+SA ++K  AAVRVSSP+ PKLT+RASLKDLG+AVAATAASA
Sbjct: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60

Query: 61  LLATNALAIEVKLGGDDGSLVFDPKEFSVASGEAIVFKNNAGFPHNIVFDEDEIPSGVDA 120
           LLA+NALAIEV LGGDDGSL F P +FSVA+GE IVFKNNAGFPHN+VFDEDEIPSGVDA
Sbjct: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 SKISMSEEDLLNAPGEIYEVKLTEKGSYSFYCSPHQGAGMVGKVTVN 167
            KISM+EEDLLNAPGE+YEV LTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 167

[Close]

BLAST of Tan0008411 vs. TAIR 10
Match: AT1G20340.1 (Cupredoxin superfamily protein )

HSP 1 Score: 218.0 bits (554), Expect = 5.7e-57
Identity = 117/168 (69.64%), Postives = 139/168 (82.74%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSASTKPAAAVRV--SSPAAPKLTIRASLKDLGLAVAATAAS 60
           MA+VTSA VAIPSFTGLK+S + K +A VR+  ++ A+PKLT+++SLK+ G+A  A AAS
Sbjct: 1   MASVTSATVAIPSFTGLKAS-TIKSSATVRIQTAAVASPKLTVKSSLKNFGVAAVAAAAS 60

Query: 61  ALLATNALAIEVKLGGDDGSLVFDPKEFSVASGEAIVFKNNAGFPHNIVFDEDEIPSGVD 120
             LA NA+AIEV LGG DGSL F P +FS+A GE IVFKNNAG+PHN+VFDEDEIPSGVD
Sbjct: 61  IALAGNAMAIEVLLGGGDGSLAFIPNDFSIAKGEKIVFKNNAGYPHNVVFDEDEIPSGVD 120

Query: 121 ASKISMSEEDLLNAPGEIYEVKLTEKGSYSFYCSPHQGAGMVGKVTVN 167
            +KISM E+DLLN  GE YEV LTE G+YSFYC+PHQGAGMVGKVTVN
Sbjct: 121 VAKISMDEQDLLNGAGETYEVALTEPGTYSFYCAPHQGAGMVGKVTVN 167

[Close]

BLAST of Tan0008411 vs. TAIR 10
Match: AT1G76100.1 (plastocyanin 1 )

HSP 1 Score: 211.8 bits (538), Expect = 4.1e-55
Identity = 115/170 (67.65%), Postives = 131/170 (77.06%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSASTKPAAAVRVS-----SPAAPKLTIRASLKDLGLAVAAT 60
           MAA+TSA V IPSFTGLK + S+KP     +S     + A PKL +++SLKD G+   AT
Sbjct: 1   MAAITSATVTIPSFTGLKLAVSSKPKTLSTISRSTSATRAPPKLALKSSLKDFGVIAVAT 60

Query: 61  AASALLATNALAIEVKLGGDDGSLVFDPKEFSVASGEAIVFKNNAGFPHNIVFDEDEIPS 120
           AAS +LA NA+A+EV LG DDGSL F P EF+VA GE IVFKNNAGFPHN+VFDEDEIPS
Sbjct: 61  AASIVLAGNAMAMEVLLGSDDGSLAFVPSEFTVAKGEKIVFKNNAGFPHNVVFDEDEIPS 120

Query: 121 GVDASKISMSEEDLLNAPGEIYEVKLTEKGSYSFYCSPHQGAGMVGKVTV 166
           GVDASKISM E  LLN  GE YEV LTE GSY FYC+PHQGAGMVGK+TV
Sbjct: 121 GVDASKISMDETALLNGAGETYEVTLTEPGSYGFYCAPHQGAGMVGKLTV 170

The following BLAST results are available for this feature:

BLAST of Tan0008411 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P00299	2.7e-59	72.62	Plastocyanin A, chloroplastic OS=Populus nigra OX=3691 GN=PETE PE=1 SV=2	[more]
P00289	3.5e-59	73.81	Plastocyanin, chloroplastic OS=Spinacia oleracea OX=3562 GN=PETE PE=1 SV=2	[more]
P17340	2.9e-58	70.59	Plastocyanin, chloroplastic OS=Solanum lycopersicum OX=4081 GN=PETE PE=2 SV=1	[more]
P11970	1.5e-57	69.64	Plastocyanin B, chloroplastic OS=Populus nigra OX=3691 GN=PETE PE=1 SV=2	[more]
P16002	9.4e-57	69.05	Plastocyanin, chloroplastic OS=Pisum sativum OX=3888 GN=PETE PE=3 SV=1	[more]

BLAST of Tan0008411 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466451.1	5.1e-68	83.13	PREDICTED: plastocyanin [Cucumis melo] >TYK31457.1 plastocyanin [Cucumis melo va...	[more]
KAA0063319.1	6.7e-68	83.13	plastocyanin [Cucumis melo var. makuwa]	[more]
XP_022937324.1	1.1e-67	85.03	plastocyanin [Cucurbita moschata]	[more]
XP_023534891.1	1.5e-67	85.63	plastocyanin [Cucurbita pepo subsp. pepo]	[more]
XP_022976282.1	3.3e-67	85.03	plastocyanin [Cucurbita maxima]	[more]

BLAST of Tan0008411 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E5P8	2.5e-68	83.13	Plastocyanin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007720 ...	[more]
A0A1S3CRA6	2.5e-68	83.13	Plastocyanin OS=Cucumis melo OX=3656 GN=LOC103503851 PE=3 SV=1	[more]
A0A5A7VCJ5	3.2e-68	83.13	Plastocyanin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G001440 ...	[more]
A0A6J1FAV0	5.5e-68	85.03	Plastocyanin OS=Cucurbita moschata OX=3662 GN=LOC111443648 PE=3 SV=1	[more]
A0A6J1IFB6	1.6e-67	85.03	Plastocyanin OS=Cucurbita maxima OX=3661 GN=LOC111476724 PE=3 SV=1	[more]

BLAST of Tan0008411 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G20340.1	5.7e-57	69.64	Cupredoxin superfamily protein	[more]
AT1G76100.1	4.1e-55	67.65	plastocyanin 1	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001235	Blue (type 1) copper protein, plastocyanin-type	PRINTS	PR00156	COPPERBLUE	coord: 102..117 score: 51.92 coord: 143..157 score: 51.99 coord: 87..100 score: 39.15
IPR002387	Plastocyanin	PRINTS	PR00157	PLASTOCYANIN	coord: 73..92 score: 57.68 coord: 145..164 score: 80.37 coord: 96..114 score: 81.77
IPR002387	Plastocyanin	TIGRFAM	TIGR02656	TIGR02656	coord: 68..166 e-value: 3.2E-43 score: 144.1
IPR002387	Plastocyanin	CDD	cd04219	Plastocyanin	coord: 68..166 e-value: 1.70601E-52 score: 160.613
IPR000923	Blue (type 1) copper domain	PFAM	PF00127	Copper-bind	coord: 69..166 e-value: 2.4E-35 score: 120.9
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 68..166 e-value: 4.4E-29 score: 103.1
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 66..166
None	No IPR available	PANTHER	PTHR34192:SF11	PLASTOCYANIN	coord: 1..166
None	No IPR available	PANTHER	PTHR34192	PLASTOCYANIN MAJOR ISOFORM, CHLOROPLASTIC-RELATED	coord: 1..166
IPR028871	Blue (type 1) copper protein, binding site	PROSITE	PS00196	COPPER_BLUE	coord: 145..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0008411.1	Tan0008411.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0009535	chloroplast thylakoid membrane
molecular_function	GO:0005507	copper ion binding
molecular_function	GO:0009055	electron transfer activity