Tan0008352 (gene) Snake gourd v1

Overview


Name	Tan0008352
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	photosynthetic NDH subunit of subcomplex B 1, chloroplastic
Location	LG06: 3428694 .. 3431904 (+)
RNA-Seq Expression	Tan0008352
Synteny	Tan0008352

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCCAACTAAACGTTATGGAAACTCAATCCAAACCCTGCAAAAAACTAGCTTTGAAGAACCATTCATGGCTACTTCTTCTCTACCCACCAAATCCCTCCCGCCATTTTTGCCGACCTCAAGCTCTCCACCTTCTTCTCCTTCAACCCACTTCGCGAAGCCGCTCTTTCTAGCCTCGCCGGACATTTCTCTCTGCATTTCCTCATCGCCCTCAAAACTTCAAATCGCCAGTTCCAAGAAAAATCCATGGCTCGACCCTTTCGACGACGGCGACGATCCGGACATGGAATACGGCTCTCTCTTCGCCGACGGGAAGCAGGAAGAGGACCCTCGCCCGCCGGACAATCCCAACAATCCCTATGGGTTCTTGAAATTTCCTCAGGGATACATGGTGGAAGTCGCTTCCCTGGGCCTGAAAATCCGGGGAGATGTACGGCGGTGCTGCTGCGTGATCTCCGGCGGTGTTTATGAAAACCTTCTCTTCTTTCCGGCGGTTCAATTGCTCAAGGATCGGTACCCAGGTGTTCAAATTGATGTGTTGGCTTCGGCGAGGGGCAAACAGACTTATGAATTGAACAAGAATGTGAGATGGTCTAATGTCTATGATCCGGATGATTATTTTCCTGAACCAGCGGAGTACACTGACATGGTTGGATTGCTCAAGGTTGGTTCATCTTCTCTGCAACAATTGACCTTGAAATTGAATTGAACAATATGGCTAGTGATTCTACACCATTGGATATATGAAAGAGTTTAAATATTTCCAACCATGGTTGATAGGGATAAACAGAACTTGAACTAGCATCAAATGATTACTAGGACGGCCACATTGAATAATTTTTGGGCTTTAGGGGTTGAGATTTAACTTAGATGTGAGAATTGGAGAGATTGGGACTGATTTGGTTGGTACAACTCACGACCTTACTTACGACTTTACTTGAACAGGATCTGTTCTATAGGTTGTACAGCAGAGTTTTTGAGTTCTAAAAATTTGAGCGGTGCAACTTGTTTCATTGTCTGTTGCAGGGTAGGTATTATGACATGATCTTGTCAACCAAGCTAGCAGGGCTTGGACATGCAGTGTTTTTGTTTATGACAACGGCCAGAGACAGGGTGAGCTACATTTATCCAGATGTGAATGCTGCTGGAGCAGGGCTTTTCTTGTCTGAAACATTTAAACCAGATAGCTCCAATCTTTCTGAAGGAGGATTCAACATGTGAGAATATTTTATGTTTTTTGTTATGAATTTGTACAAAAGACTTCGTATACTGATTCATCTATTAGTTTAAGCTTTTGAGTTGAATAGTAGTTTGACATAATAGTGGAGTGGGAGTGAGGTTATTTGTTCAAGTTCTCAACAATGCCATTTTCCTTTCAATTTATATTGATAGTCACTTTTTGGGTCTCGTGCTTATTTCCTAACCAACAAGGAGAATATCAAGAATGTATATAAAAGATTACATATACCATAATTTATTAGCTTTTACGTTTAGTATATACCATAACTTATCAGATTATGTTTTCGAGTTTACTAGTAGTTTACTGTTTAAAATTTAGAAGAATTTGATCATTTGTCTCATACTTACAATGTCCAATCCTGTATGATCTGGGGAGCAAGTTTTTCCAGTAAATGTGTGAATGGCTTTTATCAGAACAACAAGAAGTAGTTTCTATGTGAAAACTGAAGAACTAAAGAGAAATCACTAGCTCAAACTTCTACTTTTTTGATGCCTCGAAGGCTGATTTTCATGATTTAGGTACCATCAAATGGTCGATTGGTTAGGGAGGCCCTTTCGCAGCGTTCCTAGGCAGCCCATTCCTCCGCTCAAAGTTTCGATTTCAAGAAAATTGAAGGAGGTTGTGAAGGAGAAGTATAAGAAAGCAGGCGCTGAGAAAGGAAAATATATTGTGATTCATGGGATAGAATCAGATTCAAAAGCCTCAATGCAGTCCAACGGTGATACTGATAGCCTGCTGCCCATTCAAGCCTGGGCTGAAATAGCCAATGCTATAAGGTAGATATCATGTCAAATTCTTGCTTTATCAACAATAAAGGCTGAGTAATAGGTTAATACAATTAGATTGAAGGTACTAAAAAGCTACCTGATACTGCTTTCTCTTTCTCTGTTTTCTGATGATAATACTTATTGAATCTAAATACAGGGGATTCAAACCAGTTTTTGTCATCCCACATGAAAAAGAAAGGGAAAATGTCGAGGAAGAGGTTGGAGATGATGCAAGCATCGTATTTATCACGACCCCGGGACAGGTATTTATAACGATCCATGTTTCTCTTGAAGTATCATAAAGTAAAATGTAAAAGGATGAATACAAAAATCACAATCTTAAATAAGAAAGCTAGGAAGAAGGAAGGGAATTTACAGTTAGAAAAGGAGTTTTTTAATTAAAGTGAAGAACCTAAATACTCCATTTTTTTGAGTTCTACAGTGTGGGGAGGTGGGGGATTAGAACCTTTGATCCCTTGTCGAAGGTGTATGCCTTAACTAATTGAGTTGGCTCAGGTTGGTCCTAAATACTTCATTATTTTAACTCTTCATTTTTAACTGCAATCTGCAGCTAGCTGCTCTCATTAATGACTCGGCCGGCCTAATAGCTACCAACACTGCCGCTATCCAACTCGCCATTGCTCGCGAAAAACTGAGGTCTTGATCCGTTGCTCCTTCACATAAACTCAATAGTTTGCCTACTGATCTTAAAATCTTGCATTTGCTTGTAGTATGAAACGAACTGTGCTTGACATGTATCTGTGGTGCCCATGTGTTTGCAGCATTGCATTGTTTTGCTCTGAAGAGAAAGCGAAACTATTCGTTCCCGACGCCGAAGCAAAGAGATGCATCACAGTTTCATCAGCAACGGGACGGCTGATCGATATCGATATCAGCACGGTTAAAAAGGCCATACAGAGTCTTGAAGTGCCTTTGGCTCTTGCTTTTAAGTGACATCATAGATTTTCTTACTCTATTTATGTTTATCATCCTGATATTCTTTCATTTTGTTTCACTTCTGTTACCAATTACCATCAGTTGTATATCAAAGGCAAAGCATTGGCAATGAAGAAGGGACTAAGTAATTGTATATGTTCTGTCTGGTCTAATTGCTTTTTCAAAGTTGATTATCTTTGTTTTCTTTTTGATTGGTTTGTCTTGGGAACTAATATTTTTATGCATTTGAAAATCACACATCTAGTAAAA

mRNA sequence

GCCCAACTAAACGTTATGGAAACTCAATCCAAACCCTGCAAAAAACTAGCTTTGAAGAACCATTCATGGCTACTTCTTCTCTACCCACCAAATCCCTCCCGCCATTTTTGCCGACCTCAAGCTCTCCACCTTCTTCTCCTTCAACCCACTTCGCGAAGCCGCTCTTTCTAGCCTCGCCGGACATTTCTCTCTGCATTTCCTCATCGCCCTCAAAACTTCAAATCGCCAGTTCCAAGAAAAATCCATGGCTCGACCCTTTCGACGACGGCGACGATCCGGACATGGAATACGGCTCTCTCTTCGCCGACGGGAAGCAGGAAGAGGACCCTCGCCCGCCGGACAATCCCAACAATCCCTATGGGTTCTTGAAATTTCCTCAGGGATACATGGTGGAAGTCGCTTCCCTGGGCCTGAAAATCCGGGGAGATGTACGGCGGTGCTGCTGCGTGATCTCCGGCGGTGTTTATGAAAACCTTCTCTTCTTTCCGGCGGTTCAATTGCTCAAGGATCGGTACCCAGGTGTTCAAATTGATGTGTTGGCTTCGGCGAGGGGCAAACAGACTTATGAATTGAACAAGAATGTGAGATGGTCTAATGTCTATGATCCGGATGATTATTTTCCTGAACCAGCGGAGTACACTGACATGGTTGGATTGCTCAAGGGTAGGTATTATGACATGATCTTGTCAACCAAGCTAGCAGGGCTTGGACATGCAGTGTTTTTGTTTATGACAACGGCCAGAGACAGGGTGAGCTACATTTATCCAGATGTGAATGCTGCTGGAGCAGGGCTTTTCTTGTCTGAAACATTTAAACCAGATAGCTCCAATCTTTCTGAAGGAGGATTCAACATGTACCATCAAATGGTCGATTGGTTAGGGAGGCCCTTTCGCAGCGTTCCTAGGCAGCCCATTCCTCCGCTCAAAGTTTCGATTTCAAGAAAATTGAAGGAGGTTGTGAAGGAGAAGTATAAGAAAGCAGGCGCTGAGAAAGGAAAATATATTGTGATTCATGGGATAGAATCAGATTCAAAAGCCTCAATGCAGTCCAACGGTGATACTGATAGCCTGCTGCCCATTCAAGCCTGGGCTGAAATAGCCAATGCTATAAGGGGATTCAAACCAGTTTTTGTCATCCCACATGAAAAAGAAAGGGAAAATGTCGAGGAAGAGGTTGGAGATGATGCAAGCATCGTATTTATCACGACCCCGGGACAGCTAGCTGCTCTCATTAATGACTCGGCCGGCCTAATAGCTACCAACACTGCCGCTATCCAACTCGCCATTGCTCGCGAAAAACTGAGCATTGCATTGTTTTGCTCTGAAGAGAAAGCGAAACTATTCGTTCCCGACGCCGAAGCAAAGAGATGCATCACAGTTTCATCAGCAACGGGACGGCTGATCGATATCGATATCAGCACGGTTAAAAAGGCCATACAGAGTCTTGAAGTGCCTTTGGCTCTTGCTTTTAAGTGACATCATAGATTTTCTTACTCTATTTATGTTTATCATCCTGATATTCTTTCATTTTGTTTCACTTCTGTTACCAATTACCATCAGTTGTATATCAAAGGCAAAGCATTGGCAATGAAGAAGGGACTAAGTAATTGTATATGTTCTGTCTGGTCTAATTGCTTTTTCAAAGTTGATTATCTTTGTTTTCTTTTTGATTGGTTTGTCTTGGGAACTAATATTTTTATGCATTTGAAAATCACACATCTAGTAAAA

Coding sequence (CDS)

ATGGCTACTTCTTCTCTACCCACCAAATCCCTCCCGCCATTTTTGCCGACCTCAAGCTCTCCACCTTCTTCTCCTTCAACCCACTTCGCGAAGCCGCTCTTTCTAGCCTCGCCGGACATTTCTCTCTGCATTTCCTCATCGCCCTCAAAACTTCAAATCGCCAGTTCCAAGAAAAATCCATGGCTCGACCCTTTCGACGACGGCGACGATCCGGACATGGAATACGGCTCTCTCTTCGCCGACGGGAAGCAGGAAGAGGACCCTCGCCCGCCGGACAATCCCAACAATCCCTATGGGTTCTTGAAATTTCCTCAGGGATACATGGTGGAAGTCGCTTCCCTGGGCCTGAAAATCCGGGGAGATGTACGGCGGTGCTGCTGCGTGATCTCCGGCGGTGTTTATGAAAACCTTCTCTTCTTTCCGGCGGTTCAATTGCTCAAGGATCGGTACCCAGGTGTTCAAATTGATGTGTTGGCTTCGGCGAGGGGCAAACAGACTTATGAATTGAACAAGAATGTGAGATGGTCTAATGTCTATGATCCGGATGATTATTTTCCTGAACCAGCGGAGTACACTGACATGGTTGGATTGCTCAAGGGTAGGTATTATGACATGATCTTGTCAACCAAGCTAGCAGGGCTTGGACATGCAGTGTTTTTGTTTATGACAACGGCCAGAGACAGGGTGAGCTACATTTATCCAGATGTGAATGCTGCTGGAGCAGGGCTTTTCTTGTCTGAAACATTTAAACCAGATAGCTCCAATCTTTCTGAAGGAGGATTCAACATGTACCATCAAATGGTCGATTGGTTAGGGAGGCCCTTTCGCAGCGTTCCTAGGCAGCCCATTCCTCCGCTCAAAGTTTCGATTTCAAGAAAATTGAAGGAGGTTGTGAAGGAGAAGTATAAGAAAGCAGGCGCTGAGAAAGGAAAATATATTGTGATTCATGGGATAGAATCAGATTCAAAAGCCTCAATGCAGTCCAACGGTGATACTGATAGCCTGCTGCCCATTCAAGCCTGGGCTGAAATAGCCAATGCTATAAGGGGATTCAAACCAGTTTTTGTCATCCCACATGAAAAAGAAAGGGAAAATGTCGAGGAAGAGGTTGGAGATGATGCAAGCATCGTATTTATCACGACCCCGGGACAGCTAGCTGCTCTCATTAATGACTCGGCCGGCCTAATAGCTACCAACACTGCCGCTATCCAACTCGCCATTGCTCGCGAAAAACTGAGCATTGCATTGTTTTGCTCTGAAGAGAAAGCGAAACTATTCGTTCCCGACGCCGAAGCAAAGAGATGCATCACAGTTTCATCAGCAACGGGACGGCTGATCGATATCGATATCAGCACGGTTAAAAAGGCCATACAGAGTCTTGAAGTGCCTTTGGCTCTTGCTTTTAAGTGA

Protein sequence

MATSSLPTKSLPPFLPTSSSPPSSPSTHFAKPLFLASPDISLCISSSPSKLQIASSKKNPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKIRGDVRRCCCVISGGVYENLLFFPAVQLLKDRYPGVQIDVLASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKGRYYDMILSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPIPPLKVSISRKLKEVVKEKYKKAGAEKGKYIVIHGIESDSKASMQSNGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIATNTAAIQLAIAREKLSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDISTVKKAIQSLEVPLALAFK

Homology

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BLAST of Tan0008352 vs. ExPASy Swiss-Prot
Match: Q9S9N6 (Photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSB1 PE=2 SV=1)

HSP 1 Score: 658.7 bits (1698), Expect = 5.0e-188
Identity = 340/465 (73.12%), Postives = 383/465 (82.37%), Query Frame = 0


Query: 4   SSLPTKSLP-PFLPTSSSPPSSPSTHFAKPLFLASPDISLCISSSPSKLQIASSKKNPWL 63
           SSLP   LP P  P   +PP S S    KPL   +    L   SS   + +   K NPWL
Sbjct: 3   SSLPL--LPKPISPFFKTPPFSTS----KPLVFLNFQTRLTSRSSDVSVNL-KKKNNPWL 62

Query: 64  DPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKIRGDV 123
           DPFD G+DPD EYGSLFADGKQ+EDPRPPDNP+NPYGFLKFP+GY VE+ASL LKIRGDV
Sbjct: 63  DPFDSGEDPDNEYGSLFADGKQDEDPRPPDNPDNPYGFLKFPKGYTVELASLPLKIRGDV 122

Query: 124 RRCCCVISGGVYENLLFFPAVQLLKDRYPGVQIDVLASARGKQTYELNKNVRWSNVYDPD 183
           RRCCCVISGGVYENLLFFP +QL+KDRYPGVQ+D+L + RGKQTYELNKNVRW+NVYDPD
Sbjct: 123 RRCCCVISGGVYENLLFFPTIQLIKDRYPGVQVDILTTERGKQTYELNKNVRWANVYDPD 182

Query: 184 DYFPEPAEYTDMVGLLKGRYYDMILSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAG 243
           D++PEPAEYTDM+GLLKGRYYDM+LSTKLAGLGHA FLFMTTARDRVSYIYP+VN+AGAG
Sbjct: 183 DHWPEPAEYTDMIGLLKGRYYDMVLSTKLAGLGHAAFLFMTTARDRVSYIYPNVNSAGAG 242

Query: 244 LFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPIPPLKVSISRKLKEVVKEKY 303
           L LSETF  +++NLSE G++MY QM DWLGRPFRSVPR P+ PL+VSISRK+KEVV  KY
Sbjct: 243 LMLSETFTAENTNLSELGYSMYTQMEDWLGRPFRSVPRTPLLPLRVSISRKVKEVVAAKY 302

Query: 304 KKAGAEKGKYIVIHGIESDSKASMQSNGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKE 363
           + AGA  GK+IVIHGIESDSKASMQS GD DSLL ++ WA+I   +RGFKPVFVIPHEKE
Sbjct: 303 RNAGAVTGKFIVIHGIESDSKASMQSKGDADSLLSLEKWAKIIKGVRGFKPVFVIPHEKE 362

Query: 364 RENVEEEVGDDASIVFITTPGQLAALINDSAGLIATNTAAIQLAIAREKLSIALFCSEEK 423
           RENVE+ VGDD SIVFITTPGQLAALINDSAG+IATNTAAIQLA AR+K  I LF SEEK
Sbjct: 363 RENVEDFVGDDTSIVFITTPGQLAALINDSAGVIATNTAAIQLANARDKPCIGLFSSEEK 422

Query: 424 AKLFVPDAEAK-RCITVSSATGRLIDIDISTVKKAIQSLEVPLAL 467
            KLFVP AE K  C+ ++S TG+L DIDI TVK A+Q  E  LAL
Sbjct: 423 GKLFVPYAEEKSNCVIIASKTGKLADIDIGTVKNAMQVFEGSLAL 460

[Close]

BLAST of Tan0008352 vs. NCBI nr
Match: XP_038896546.1 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 869.4 bits (2245), Expect = 1.4e-248
Identity = 438/470 (93.19%), Postives = 451/470 (95.96%), Query Frame = 0


Query: 1   MATSSLPTKSLPPFLPTSSSPPSSPSTHFAKPLFLASPDISLCI-SSSPSKLQIASSKKN 60
           MATSSLPTKSLPPF PTSS  PSSPSTHF KPLFLA PDISL   SSS SKL I SSKKN
Sbjct: 1   MATSSLPTKSLPPFSPTSSFSPSSPSTHFTKPLFLAPPDISLSTSSSSSSKLLIPSSKKN 60

Query: 61  PWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKIR 120
            WLDPFDDGDDP+MEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVE+ASLGLK+R
Sbjct: 61  QWLDPFDDGDDPEMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKLR 120

Query: 121 GDVRRCCCVISGGVYENLLFFPAVQLLKDRYPGVQIDVLASARGKQTYELNKNVRWSNVY 180
           GDVRRCCCV+SGGVYENLLFFPA+QLLKDRYPGVQIDV+ASARGKQTYELNKNVRWSNVY
Sbjct: 121 GDVRRCCCVMSGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVY 180

Query: 181 DPDDYFPEPAEYTDMVGLLKGRYYDMILSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAA 240
           DPDDYFPEPAEYTDMVGLLKGRYYDM+LSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAA
Sbjct: 181 DPDDYFPEPAEYTDMVGLLKGRYYDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAA 240

Query: 241 GAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPIPPLKVSISRKLKEVVK 300
           GAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPR P+PPLKVSISRKLKEVV 
Sbjct: 241 GAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVVA 300

Query: 301 EKYKKAGAEKGKYIVIHGIESDSKASMQSNGDTDSLLPIQAWAEIANAIRGFKPVFVIPH 360
           EKYKKAGAEKGKYIVIHGIESDSKASMQS GDTDSLLPIQAWAEIANA+RGFKPVFVIPH
Sbjct: 301 EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAVRGFKPVFVIPH 360

Query: 361 EKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIATNTAAIQLAIAREKLSIALFCS 420
           EKERENVEEEVGDDASIVFITTPGQLAALINDSAG+IATNTAA+QLAIAREK SIALFCS
Sbjct: 361 EKERENVEEEVGDDASIVFITTPGQLAALINDSAGVIATNTAAVQLAIAREKPSIALFCS 420

Query: 421 EEKAKLFVPDAEAKRCITVSSATGRLIDIDISTVKKAIQSLEVPLALAFK 470
           EEKAKLFVPDAEAKRCITVSSATGRL DID+ TVKKAIQS EVPLALAF+
Sbjct: 421 EEKAKLFVPDAEAKRCITVSSATGRLTDIDLGTVKKAIQSFEVPLALAFQ 470

[Close]

BLAST of Tan0008352 vs. NCBI nr
Match: XP_022953552.1 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 862.8 bits (2228), Expect = 1.3e-246
Identity = 434/471 (92.14%), Postives = 451/471 (95.75%), Query Frame = 0


Query: 1   MATSSLPTKSLPPFLPTSSSPPSSPSTHFAKPLFLASPDISLCI-SSSPSKLQIAS-SKK 60
           MATSSLPTKSLPPFLP SS PPSSPSTHF KP FLA PDISL   SSSPSKL I S +KK
Sbjct: 1   MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKK 60

Query: 61  NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKI 120
           NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLK+
Sbjct: 61  NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKL 120

Query: 121 RGDVRRCCCVISGGVYENLLFFPAVQLLKDRYPGVQIDVLASARGKQTYELNKNVRWSNV 180
           RGDVRRCCCVISGGVYENLLFFPA+QLLKDRYPGVQIDV+ASARGKQTYELNKNVRWSNV
Sbjct: 121 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 180

Query: 181 YDPDDYFPEPAEYTDMVGLLKGRYYDMILSTKLAGLGHAVFLFMTTARDRVSYIYPDVNA 240
           YDPDDYFPEPA+YTDMVGLLKGRYYDM+LSTKLAG+GHA FLFMTTARDRVSYIYPDVNA
Sbjct: 181 YDPDDYFPEPADYTDMVGLLKGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNA 240

Query: 241 AGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPIPPLKVSISRKLKEVV 300
           AGAGLFLS+TFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPR P+PPLKVSISRKLKE+V
Sbjct: 241 AGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIV 300

Query: 301 KEKYKKAGAEKGKYIVIHGIESDSKASMQSNGDTDSLLPIQAWAEIANAIRGFKPVFVIP 360
           KEKY +AG EKGKYIVIHGIESDSKASMQS GDTDSLLPIQAWAEIANAIRGFKPVFVIP
Sbjct: 301 KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIP 360

Query: 361 HEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIATNTAAIQLAIAREKLSIALFC 420
           HEKERENVEEEVGD+ASIVFITTPGQLAALINDSAG+IATNTAAIQLAIAREK SIALFC
Sbjct: 361 HEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIATNTAAIQLAIAREKPSIALFC 420

Query: 421 SEEKAKLFVPDAEAKRCITVSSATGRLIDIDISTVKKAIQSLEVPLALAFK 470
           SEEKAKLFVPD+EAKRCI VSSATGRLIDID+ TVK+AIQS EVPLALAF+
Sbjct: 421 SEEKAKLFVPDSEAKRCIAVSSATGRLIDIDMGTVKRAIQSFEVPLALAFQ 471

[Close]

BLAST of Tan0008352 vs. NCBI nr
Match: KAG6575629.1 (Photosynthetic NDH subunit of subcomplex B 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014183.1 Photosynthetic NDH subunit of subcomplex B 1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 862.4 bits (2227), Expect = 1.7e-246
Identity = 434/471 (92.14%), Postives = 450/471 (95.54%), Query Frame = 0


Query: 1   MATSSLPTKSLPPFLPTSSSPPSSPSTHFAKPLFLASPDISLCI-SSSPSKLQIAS-SKK 60
           MATSSLPTKSLPPFLP SS PPSSPSTHF KP FLA PDISL   SSSPSKL I S +KK
Sbjct: 1   MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKK 60

Query: 61  NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKI 120
           NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLK+
Sbjct: 61  NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKL 120

Query: 121 RGDVRRCCCVISGGVYENLLFFPAVQLLKDRYPGVQIDVLASARGKQTYELNKNVRWSNV 180
           RGDVRRCCCVISGGVYENLLFFPA+QLLKDRYPGVQIDV+ASARGKQTYELNKNVRWSNV
Sbjct: 121 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 180

Query: 181 YDPDDYFPEPAEYTDMVGLLKGRYYDMILSTKLAGLGHAVFLFMTTARDRVSYIYPDVNA 240
           YDPDDYFPEPA+YTDMVGLLKGRYYDM+LSTKLAG+GHA FLFMTTARDRVSYIYPDVNA
Sbjct: 181 YDPDDYFPEPADYTDMVGLLKGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNA 240

Query: 241 AGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPIPPLKVSISRKLKEVV 300
           AGAGLFLS+TFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPR P+PPLKVSISRKLKE+V
Sbjct: 241 AGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIV 300

Query: 301 KEKYKKAGAEKGKYIVIHGIESDSKASMQSNGDTDSLLPIQAWAEIANAIRGFKPVFVIP 360
           KEKY +AG EKGKYIVIHGIESDSKASMQS GDTDSLLPIQAWAEIANAIRGFKPVFVIP
Sbjct: 301 KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIP 360

Query: 361 HEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIATNTAAIQLAIAREKLSIALFC 420
           HEKERENVEEEVGD+ASIVFITTPGQLAALINDSAG+IATNTAAIQLAIAREK SIALFC
Sbjct: 361 HEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIATNTAAIQLAIAREKPSIALFC 420

Query: 421 SEEKAKLFVPDAEAKRCITVSSATGRLIDIDISTVKKAIQSLEVPLALAFK 470
           SEEKAKLFVPDAEAKRCI VSS TGRLIDID+ TVK+AIQS EVPLALAF+
Sbjct: 421 SEEKAKLFVPDAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAFQ 471

[Close]

BLAST of Tan0008352 vs. NCBI nr
Match: XP_022992479.1 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 859.0 bits (2218), Expect = 1.9e-245
Identity = 431/471 (91.51%), Postives = 449/471 (95.33%), Query Frame = 0


Query: 1   MATSSLPTKSLPPFLPTSSSPPSSPSTHFAKPLFLASPDISLCI-SSSPSKLQIAS-SKK 60
           MATSSLPTKSLPPFLP SS PPSSPSTHF KP FLA PDISL   SSSPSKL I S +KK
Sbjct: 1   MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKK 60

Query: 61  NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKI 120
           NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVE+ASLGLK+
Sbjct: 61  NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKL 120

Query: 121 RGDVRRCCCVISGGVYENLLFFPAVQLLKDRYPGVQIDVLASARGKQTYELNKNVRWSNV 180
           RGDVRRCCCVISGGVYENLLFFP +QLLKDRYPGVQIDV+ASARGKQTYELNKNVRWSNV
Sbjct: 121 RGDVRRCCCVISGGVYENLLFFPTIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 180

Query: 181 YDPDDYFPEPAEYTDMVGLLKGRYYDMILSTKLAGLGHAVFLFMTTARDRVSYIYPDVNA 240
           YDPDDYFPEPA+YTDMVGLLKGRYYDM+LSTKLAG+GHA FLFMTTARDRVSYIYPDVNA
Sbjct: 181 YDPDDYFPEPADYTDMVGLLKGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNA 240

Query: 241 AGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPIPPLKVSISRKLKEVV 300
           AGAGLFLS+TFKP+SSNLSEGGFNMYHQM DWLGRPFRSVPR P+PPLKVSISRKLKE+V
Sbjct: 241 AGAGLFLSQTFKPESSNLSEGGFNMYHQMADWLGRPFRSVPRHPVPPLKVSISRKLKEIV 300

Query: 301 KEKYKKAGAEKGKYIVIHGIESDSKASMQSNGDTDSLLPIQAWAEIANAIRGFKPVFVIP 360
           KEKY +AG EKGKYIVIHGIESDSKASMQS GDTDSLLPIQAWAEIANAIRGFKPVFVIP
Sbjct: 301 KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIP 360

Query: 361 HEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIATNTAAIQLAIAREKLSIALFC 420
           HEKERENVEEEVGD+ASIVFITTPGQLAALINDSAG+IATNTAAIQLAIAREK SIALFC
Sbjct: 361 HEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIATNTAAIQLAIAREKPSIALFC 420

Query: 421 SEEKAKLFVPDAEAKRCITVSSATGRLIDIDISTVKKAIQSLEVPLALAFK 470
           SEEKAKLFVPDAEAKRCI VSSATGRLIDID+ TVK+AIQS EVPLALAF+
Sbjct: 421 SEEKAKLFVPDAEAKRCIAVSSATGRLIDIDMGTVKRAIQSFEVPLALAFQ 471

[Close]

BLAST of Tan0008352 vs. NCBI nr
Match: XP_022145001.1 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Momordica charantia])

HSP 1 Score: 857.4 bits (2214), Expect = 5.6e-245
Identity = 429/469 (91.47%), Postives = 448/469 (95.52%), Query Frame = 0


Query: 1   MATSSLPTKSLPPFLPTSSSPPSSPSTHFAKPLFLASPDIS-LCISSSPSKLQIASSKKN 60
           MATSSLPTKSLPPFLP+S+SPPSSPSTHF KPLFLA PDIS L  + SP K  I ++KKN
Sbjct: 3   MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPTAKKN 62

Query: 61  PWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKIR 120
           PW DPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVE+ASLGLK+R
Sbjct: 63  PWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKLR 122

Query: 121 GDVRRCCCVISGGVYENLLFFPAVQLLKDRYPGVQIDVLASARGKQTYELNKNVRWSNVY 180
           GDVRRCCCVISGGVYENLLFFPA+QLLKDRYPGVQIDV+ASARGKQTYELNKNVRWSNVY
Sbjct: 123 GDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVY 182

Query: 181 DPDDYFPEPAEYTDMVGLLKGRYYDMILSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAA 240
           DPDDYFPEPAEYTDMVGLLK RYYDM+LSTKLAG+GHAVFLFMTTARDRVSYIYPDVNAA
Sbjct: 183 DPDDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAA 242

Query: 241 GAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPIPPLKVSISRKLKEVVK 300
           GAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPR P+PPLKV ISRKLKEVV+
Sbjct: 243 GAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVVE 302

Query: 301 EKYKKAGAEKGKYIVIHGIESDSKASMQSNGDTDSLLPIQAWAEIANAIRGFKPVFVIPH 360
           EKYKKAGAEKGKYIVIHGIESDSKASMQS GDTDSLLPIQAWAEIA+ IRGFKPVFVIPH
Sbjct: 303 EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPH 362

Query: 361 EKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIATNTAAIQLAIAREKLSIALFCS 420
           EKERENVEEEVGDDA I+FITTPGQLAALINDSAGLIATNTAAIQLAIAREK SIALF S
Sbjct: 363 EKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALFSS 422

Query: 421 EEKAKLFVPDAEAKRCITVSSATGRLIDIDISTVKKAIQSLEVPLALAF 469
           +EKAKLFVPDAE+KRCITVSSATGRLIDID+ TVK+AIQS EVPLALAF
Sbjct: 423 DEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF 471

[Close]

BLAST of Tan0008352 vs. ExPASy TrEMBL
Match: A0A6J1GNJ2 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111456057 PE=4 SV=1)

HSP 1 Score: 862.8 bits (2228), Expect = 6.4e-247
Identity = 434/471 (92.14%), Postives = 451/471 (95.75%), Query Frame = 0


Query: 1   MATSSLPTKSLPPFLPTSSSPPSSPSTHFAKPLFLASPDISLCI-SSSPSKLQIAS-SKK 60
           MATSSLPTKSLPPFLP SS PPSSPSTHF KP FLA PDISL   SSSPSKL I S +KK
Sbjct: 1   MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKK 60

Query: 61  NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKI 120
           NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLK+
Sbjct: 61  NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKL 120

Query: 121 RGDVRRCCCVISGGVYENLLFFPAVQLLKDRYPGVQIDVLASARGKQTYELNKNVRWSNV 180
           RGDVRRCCCVISGGVYENLLFFPA+QLLKDRYPGVQIDV+ASARGKQTYELNKNVRWSNV
Sbjct: 121 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 180

Query: 181 YDPDDYFPEPAEYTDMVGLLKGRYYDMILSTKLAGLGHAVFLFMTTARDRVSYIYPDVNA 240
           YDPDDYFPEPA+YTDMVGLLKGRYYDM+LSTKLAG+GHA FLFMTTARDRVSYIYPDVNA
Sbjct: 181 YDPDDYFPEPADYTDMVGLLKGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNA 240

Query: 241 AGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPIPPLKVSISRKLKEVV 300
           AGAGLFLS+TFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPR P+PPLKVSISRKLKE+V
Sbjct: 241 AGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIV 300

Query: 301 KEKYKKAGAEKGKYIVIHGIESDSKASMQSNGDTDSLLPIQAWAEIANAIRGFKPVFVIP 360
           KEKY +AG EKGKYIVIHGIESDSKASMQS GDTDSLLPIQAWAEIANAIRGFKPVFVIP
Sbjct: 301 KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIP 360

Query: 361 HEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIATNTAAIQLAIAREKLSIALFC 420
           HEKERENVEEEVGD+ASIVFITTPGQLAALINDSAG+IATNTAAIQLAIAREK SIALFC
Sbjct: 361 HEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIATNTAAIQLAIAREKPSIALFC 420

Query: 421 SEEKAKLFVPDAEAKRCITVSSATGRLIDIDISTVKKAIQSLEVPLALAFK 470
           SEEKAKLFVPD+EAKRCI VSSATGRLIDID+ TVK+AIQS EVPLALAF+
Sbjct: 421 SEEKAKLFVPDSEAKRCIAVSSATGRLIDIDMGTVKRAIQSFEVPLALAFQ 471

[Close]

BLAST of Tan0008352 vs. ExPASy TrEMBL
Match: A0A6J1JXN2 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111488799 PE=4 SV=1)

HSP 1 Score: 859.0 bits (2218), Expect = 9.3e-246
Identity = 431/471 (91.51%), Postives = 449/471 (95.33%), Query Frame = 0


Query: 1   MATSSLPTKSLPPFLPTSSSPPSSPSTHFAKPLFLASPDISLCI-SSSPSKLQIAS-SKK 60
           MATSSLPTKSLPPFLP SS PPSSPSTHF KP FLA PDISL   SSSPSKL I S +KK
Sbjct: 1   MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKK 60

Query: 61  NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKI 120
           NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVE+ASLGLK+
Sbjct: 61  NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKL 120

Query: 121 RGDVRRCCCVISGGVYENLLFFPAVQLLKDRYPGVQIDVLASARGKQTYELNKNVRWSNV 180
           RGDVRRCCCVISGGVYENLLFFP +QLLKDRYPGVQIDV+ASARGKQTYELNKNVRWSNV
Sbjct: 121 RGDVRRCCCVISGGVYENLLFFPTIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 180

Query: 181 YDPDDYFPEPAEYTDMVGLLKGRYYDMILSTKLAGLGHAVFLFMTTARDRVSYIYPDVNA 240
           YDPDDYFPEPA+YTDMVGLLKGRYYDM+LSTKLAG+GHA FLFMTTARDRVSYIYPDVNA
Sbjct: 181 YDPDDYFPEPADYTDMVGLLKGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNA 240

Query: 241 AGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPIPPLKVSISRKLKEVV 300
           AGAGLFLS+TFKP+SSNLSEGGFNMYHQM DWLGRPFRSVPR P+PPLKVSISRKLKE+V
Sbjct: 241 AGAGLFLSQTFKPESSNLSEGGFNMYHQMADWLGRPFRSVPRHPVPPLKVSISRKLKEIV 300

Query: 301 KEKYKKAGAEKGKYIVIHGIESDSKASMQSNGDTDSLLPIQAWAEIANAIRGFKPVFVIP 360
           KEKY +AG EKGKYIVIHGIESDSKASMQS GDTDSLLPIQAWAEIANAIRGFKPVFVIP
Sbjct: 301 KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIP 360

Query: 361 HEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIATNTAAIQLAIAREKLSIALFC 420
           HEKERENVEEEVGD+ASIVFITTPGQLAALINDSAG+IATNTAAIQLAIAREK SIALFC
Sbjct: 361 HEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIATNTAAIQLAIAREKPSIALFC 420

Query: 421 SEEKAKLFVPDAEAKRCITVSSATGRLIDIDISTVKKAIQSLEVPLALAFK 470
           SEEKAKLFVPDAEAKRCI VSSATGRLIDID+ TVK+AIQS EVPLALAF+
Sbjct: 421 SEEKAKLFVPDAEAKRCIAVSSATGRLIDIDMGTVKRAIQSFEVPLALAFQ 471

[Close]

BLAST of Tan0008352 vs. ExPASy TrEMBL
Match: A0A6J1CV27 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111014527 PE=4 SV=1)

HSP 1 Score: 857.4 bits (2214), Expect = 2.7e-245
Identity = 429/469 (91.47%), Postives = 448/469 (95.52%), Query Frame = 0


Query: 1   MATSSLPTKSLPPFLPTSSSPPSSPSTHFAKPLFLASPDIS-LCISSSPSKLQIASSKKN 60
           MATSSLPTKSLPPFLP+S+SPPSSPSTHF KPLFLA PDIS L  + SP K  I ++KKN
Sbjct: 3   MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPTAKKN 62

Query: 61  PWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKIR 120
           PW DPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVE+ASLGLK+R
Sbjct: 63  PWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKLR 122

Query: 121 GDVRRCCCVISGGVYENLLFFPAVQLLKDRYPGVQIDVLASARGKQTYELNKNVRWSNVY 180
           GDVRRCCCVISGGVYENLLFFPA+QLLKDRYPGVQIDV+ASARGKQTYELNKNVRWSNVY
Sbjct: 123 GDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVY 182

Query: 181 DPDDYFPEPAEYTDMVGLLKGRYYDMILSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAA 240
           DPDDYFPEPAEYTDMVGLLK RYYDM+LSTKLAG+GHAVFLFMTTARDRVSYIYPDVNAA
Sbjct: 183 DPDDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAA 242

Query: 241 GAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPIPPLKVSISRKLKEVVK 300
           GAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPR P+PPLKV ISRKLKEVV+
Sbjct: 243 GAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVVE 302

Query: 301 EKYKKAGAEKGKYIVIHGIESDSKASMQSNGDTDSLLPIQAWAEIANAIRGFKPVFVIPH 360
           EKYKKAGAEKGKYIVIHGIESDSKASMQS GDTDSLLPIQAWAEIA+ IRGFKPVFVIPH
Sbjct: 303 EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPH 362

Query: 361 EKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIATNTAAIQLAIAREKLSIALFCS 420
           EKERENVEEEVGDDA I+FITTPGQLAALINDSAGLIATNTAAIQLAIAREK SIALF S
Sbjct: 363 EKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALFSS 422

Query: 421 EEKAKLFVPDAEAKRCITVSSATGRLIDIDISTVKKAIQSLEVPLALAF 469
           +EKAKLFVPDAE+KRCITVSSATGRLIDID+ TVK+AIQS EVPLALAF
Sbjct: 423 DEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF 471

[Close]

BLAST of Tan0008352 vs. ExPASy TrEMBL
Match: A0A5A7UYW0 (Photosynthetic NDH subunit of subcomplex B 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001650 PE=4 SV=1)

HSP 1 Score: 850.5 bits (2196), Expect = 3.3e-243
Identity = 424/469 (90.41%), Postives = 448/469 (95.52%), Query Frame = 0


Query: 1   MATSSLPTKSLPPFLPTSSSPPSSPSTHFAKPLFLASPDISLCISSSPSKLQIASSKKNP 60
           MATSSLPTKSLPPFLPTSS PPSSPSTHF KPLFL+   ISL   S+ SKL+I  SKKNP
Sbjct: 1   MATSSLPTKSLPPFLPTSSFPPSSPSTHFTKPLFLSPLLISL---STSSKLRIPCSKKNP 60

Query: 61  WLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKIRG 120
           W DPFDDG+DP+MEYGSLF+DGKQEEDPRPPDNPNNPYGFLKFPQGYMVE+ASLGLK+RG
Sbjct: 61  WFDPFDDGEDPEMEYGSLFSDGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKLRG 120

Query: 121 DVRRCCCVISGGVYENLLFFPAVQLLKDRYPGVQIDVLASARGKQTYELNKNVRWSNVYD 180
           DVRRCCCVISGGVYENLLFFPA+QLLKDRYPGVQIDV+ASARGKQTYELNKNVRWSNVYD
Sbjct: 121 DVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYD 180

Query: 181 PDDYFPEPAEYTDMVGLLKGRYYDMILSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAG 240
           PDDYFPEPAEYTDMVG+LKGRYYDM+LSTKLAG+GHAVFLFMTTARDRVSYIYPDVNAAG
Sbjct: 181 PDDYFPEPAEYTDMVGVLKGRYYDMVLSTKLAGIGHAVFLFMTTARDRVSYIYPDVNAAG 240

Query: 241 AGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPIPPLKVSISRKLKEVVKE 300
           AGLFLSETFKP+SSNLSEGGFNMYHQMVDWLGRPFRSVPR P+PPLKVSI+RKLKEV+ E
Sbjct: 241 AGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIAE 300

Query: 301 KYKKAGAEKGKYIVIHGIESDSKASMQSNGDTDSLLPIQAWAEIANAIRGFKPVFVIPHE 360
           KYKKAG EKGKYIVIHGIESDSKASMQS GDTDSLLPI+AWAEIAN IRGFKPVFVIPHE
Sbjct: 301 KYKKAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIANCIRGFKPVFVIPHE 360

Query: 361 KERENVEEEVGDDASIVFITTPGQLAALINDSAGLIATNTAAIQLAIAREKLSIALFCSE 420
           KERENVEEEVG++ASIVFITTPGQLAALINDSAGLIATNTAA+QLAIAREK SIALFCSE
Sbjct: 361 KERENVEEEVGNNASIVFITTPGQLAALINDSAGLIATNTAAVQLAIAREKPSIALFCSE 420

Query: 421 EKAKLFVPDAEAKRCITVSSATGRLIDIDISTVKKAIQSLEVPLALAFK 470
           EKAKLFVPDAEAKRCITVSS TGRLIDID+ T+KKAIQS EVPLALAF+
Sbjct: 421 EKAKLFVPDAEAKRCITVSSTTGRLIDIDMGTIKKAIQSFEVPLALAFQ 466

[Close]

BLAST of Tan0008352 vs. ExPASy TrEMBL
Match: A0A1S3CEK1 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103499839 PE=4 SV=1)

HSP 1 Score: 847.4 bits (2188), Expect = 2.8e-242
Identity = 423/469 (90.19%), Postives = 447/469 (95.31%), Query Frame = 0


Query: 1   MATSSLPTKSLPPFLPTSSSPPSSPSTHFAKPLFLASPDISLCISSSPSKLQIASSKKNP 60
           MATSSLPTKSLPPFLPTSS PPSSPSTHF KPLFL+   ISL   S+ SKL+I  SKKNP
Sbjct: 1   MATSSLPTKSLPPFLPTSSFPPSSPSTHFTKPLFLSPLLISL---STSSKLRIPCSKKNP 60

Query: 61  WLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKIRG 120
           W DPFDDG+DP+MEYGSLF+DGKQEEDPRPPDNPNNPYGFLKFPQGYMVE+ASLGLK+RG
Sbjct: 61  WFDPFDDGEDPEMEYGSLFSDGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKLRG 120

Query: 121 DVRRCCCVISGGVYENLLFFPAVQLLKDRYPGVQIDVLASARGKQTYELNKNVRWSNVYD 180
           DVRRCCCVISGGVYENLLFFPA+QLLKDRYPGVQIDV+ASARGKQTYELNKNVRWSNVYD
Sbjct: 121 DVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYD 180

Query: 181 PDDYFPEPAEYTDMVGLLKGRYYDMILSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAG 240
           PDDYFPEPAEYTDMVG+LKGRYYDM+LSTKLAG+GHAVFLFMTTARDRVSYIYPDVNAAG
Sbjct: 181 PDDYFPEPAEYTDMVGVLKGRYYDMVLSTKLAGIGHAVFLFMTTARDRVSYIYPDVNAAG 240

Query: 241 AGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPIPPLKVSISRKLKEVVKE 300
           AGLFLSETFKP+SSNLSEGGFNMYHQMVDWLGRPFRSVPR P+PPLKVSI+RKLKEV+ E
Sbjct: 241 AGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIAE 300

Query: 301 KYKKAGAEKGKYIVIHGIESDSKASMQSNGDTDSLLPIQAWAEIANAIRGFKPVFVIPHE 360
           KYKKAG EKGKYIVIHGIESDSKASMQS GDTDSLLPI+AWAEIAN IRGFKPVFVIP E
Sbjct: 301 KYKKAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIANCIRGFKPVFVIPRE 360

Query: 361 KERENVEEEVGDDASIVFITTPGQLAALINDSAGLIATNTAAIQLAIAREKLSIALFCSE 420
           KERENVEEEVG++ASIVFITTPGQLAALINDSAGLIATNTAA+QLAIAREK SIALFCSE
Sbjct: 361 KERENVEEEVGNNASIVFITTPGQLAALINDSAGLIATNTAAVQLAIAREKPSIALFCSE 420

Query: 421 EKAKLFVPDAEAKRCITVSSATGRLIDIDISTVKKAIQSLEVPLALAFK 470
           EKAKLFVPDAEAKRCITVSS TGRLIDID+ T+KKAIQS EVPLALAF+
Sbjct: 421 EKAKLFVPDAEAKRCITVSSTTGRLIDIDMGTIKKAIQSFEVPLALAFQ 466

[Close]

BLAST of Tan0008352 vs. TAIR 10
Match: AT1G15980.1 (NDH-dependent cyclic electron flow 1 )

HSP 1 Score: 658.7 bits (1698), Expect = 3.6e-189
Identity = 340/465 (73.12%), Postives = 383/465 (82.37%), Query Frame = 0


Query: 4   SSLPTKSLP-PFLPTSSSPPSSPSTHFAKPLFLASPDISLCISSSPSKLQIASSKKNPWL 63
           SSLP   LP P  P   +PP S S    KPL   +    L   SS   + +   K NPWL
Sbjct: 3   SSLPL--LPKPISPFFKTPPFSTS----KPLVFLNFQTRLTSRSSDVSVNL-KKKNNPWL 62

Query: 64  DPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKIRGDV 123
           DPFD G+DPD EYGSLFADGKQ+EDPRPPDNP+NPYGFLKFP+GY VE+ASL LKIRGDV
Sbjct: 63  DPFDSGEDPDNEYGSLFADGKQDEDPRPPDNPDNPYGFLKFPKGYTVELASLPLKIRGDV 122

Query: 124 RRCCCVISGGVYENLLFFPAVQLLKDRYPGVQIDVLASARGKQTYELNKNVRWSNVYDPD 183
           RRCCCVISGGVYENLLFFP +QL+KDRYPGVQ+D+L + RGKQTYELNKNVRW+NVYDPD
Sbjct: 123 RRCCCVISGGVYENLLFFPTIQLIKDRYPGVQVDILTTERGKQTYELNKNVRWANVYDPD 182

Query: 184 DYFPEPAEYTDMVGLLKGRYYDMILSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAG 243
           D++PEPAEYTDM+GLLKGRYYDM+LSTKLAGLGHA FLFMTTARDRVSYIYP+VN+AGAG
Sbjct: 183 DHWPEPAEYTDMIGLLKGRYYDMVLSTKLAGLGHAAFLFMTTARDRVSYIYPNVNSAGAG 242

Query: 244 LFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPIPPLKVSISRKLKEVVKEKY 303
           L LSETF  +++NLSE G++MY QM DWLGRPFRSVPR P+ PL+VSISRK+KEVV  KY
Sbjct: 243 LMLSETFTAENTNLSELGYSMYTQMEDWLGRPFRSVPRTPLLPLRVSISRKVKEVVAAKY 302

Query: 304 KKAGAEKGKYIVIHGIESDSKASMQSNGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKE 363
           + AGA  GK+IVIHGIESDSKASMQS GD DSLL ++ WA+I   +RGFKPVFVIPHEKE
Sbjct: 303 RNAGAVTGKFIVIHGIESDSKASMQSKGDADSLLSLEKWAKIIKGVRGFKPVFVIPHEKE 362

Query: 364 RENVEEEVGDDASIVFITTPGQLAALINDSAGLIATNTAAIQLAIAREKLSIALFCSEEK 423
           RENVE+ VGDD SIVFITTPGQLAALINDSAG+IATNTAAIQLA AR+K  I LF SEEK
Sbjct: 363 RENVEDFVGDDTSIVFITTPGQLAALINDSAGVIATNTAAIQLANARDKPCIGLFSSEEK 422

Query: 424 AKLFVPDAEAK-RCITVSSATGRLIDIDISTVKKAIQSLEVPLAL 467
            KLFVP AE K  C+ ++S TG+L DIDI TVK A+Q  E  LAL
Sbjct: 423 GKLFVPYAEEKSNCVIIASKTGKLADIDIGTVKNAMQVFEGSLAL 460

The following BLAST results are available for this feature:

BLAST of Tan0008352 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S9N6	5.0e-188	73.12	Photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Arabidopsis thali...	[more]

BLAST of Tan0008352 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896546.1	1.4e-248	93.19	photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Benincasa hispida]	[more]
XP_022953552.1	1.3e-246	92.14	photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucurbita moschata]	[more]
KAG6575629.1	1.7e-246	92.14	Photosynthetic NDH subunit of subcomplex B 1, chloroplastic, partial [Cucurbita ...	[more]
XP_022992479.1	1.9e-245	91.51	photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucurbita maxima]	[more]
XP_022145001.1	5.6e-245	91.47	photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Momordica charantia...	[more]

BLAST of Tan0008352 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GNJ2	6.4e-247	92.14	photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Cucurbita moschat...	[more]
A0A6J1JXN2	9.3e-246	91.51	photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Cucurbita maxima ...	[more]
A0A6J1CV27	2.7e-245	91.47	photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Momordica charant...	[more]
A0A5A7UYW0	3.3e-243	90.41	Photosynthetic NDH subunit of subcomplex B 1 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A1S3CEK1	2.8e-242	90.19	photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Cucumis melo OX=3...	[more]

BLAST of Tan0008352 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15980.1	3.6e-189	73.12	NDH-dependent cyclic electron flow 1	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.2000	Glycogen Phosphorylase B;	coord: 136..270 e-value: 1.3E-8 score: 37.1
None	No IPR available	GENE3D	3.40.50.2000	Glycogen Phosphorylase B;	coord: 297..462 e-value: 3.9E-10 score: 41.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	SUPERFAMILY	53756	UDP-Glycosyltransferase/glycogen phosphorylase	coord: 136..460
IPR044983	Photosynthetic NDH subunit of subcomplex B 1, chloroplastic	PANTHER	PTHR37698	PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 1, CHLOROPLASTIC	coord: 1..467

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0008352.1	Tan0008352.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009773	photosynthetic electron transport in photosystem I
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0010598	NAD(P)H dehydrogenase complex (plastoquinone)
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0016757	glycosyltransferase activity