Tan0008341 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGGTCTGCAGAGATCTGTGGTGTCCTTCCGGCGGCAGGGATCTTCCGGTCTCGTTTGGGACGATAAATTCATATCGGAGGAGCTCAATAAGGCGCCGCAAAACGACGGAGAATCCAGCGCCGCGGCGGCAGAGGTGAAGACAGGAAGAAATATTCCGCCAATCAAGACGATTGACCGGAGCCGATCAAACCGCGTCGGAGGACGGGGATTCCGAAGTAAAGATACGGCGGCGCCGGCAGTGGAGCCGCCGTCGCCCAGAGTCTCTGCTTGTGGGCTCTGCAGTGGTTTCGGGAAATCGGGTGGCAAGAAACAGAGAGGGACGGCGGCTGGTAATCGCCGATCACGGTAGGTTTGGGGAATTGAAAGGGAATTATGTTTTAATTTGAATACGTTATACTTATAATTATAGAAAAGGGTTTCTTAGTATCGAAAATTTGGAAGAAACTGATGTAAATAGGTTTGATCTTTTTTGAGACTTTAGAATTTTTTTTTAATGTTTTTTCCTTTTTTTTAGTTCAAGAATGTGTGGAGTGAAAATATTTTTGAACATGTTAATAATGTCTCAATTAATTAAATTATGTTGAATCAACGGTTTGGATTAGGAATTAGGCTTCGTAGTATTGTCAAATTTTGGTATATGAATGGTTATAATAATGAGATGTTTCTTTCTTTTTCGAGTATGGAAATAAATTGTAAACGAGTTATAATAAGAAATGTAAAGAACTCGCAGGAGGCTTGTAGTGTTTTTTGTGCTAATTTGTGGTGTTTATGAATTAAAACAACTCCTATAATCTCTTAATTAATTGAATAATTTATAGAGAATCATATTCTACTAGTAGTCTCATGTTTTTGTTGGTTATGGATTCCAACCCTTTGATGATGGCAAGAGACCACAATAGGTCAATTCATACATATATAAATTGGCGTCCAACACTAATCAGTTTTTGATCCAATCGTGCACTATTCACCCTAGACTATTGGGTTTTGTTTTCAGGAACCATGAAGCATCAGTGCACAGACTCCATTAGTGAATCATTGTAATGTTAATCATCTTGCTCCACTCAATACCTCCAATAATTTGCACTGTTACGTTCTTGCACATTCATACTTTCCACAAAATAATCTTAAAAACTTTAATTTCATCGTTTGTTCCATTTGTAAGGATCCATCCAAAATAGTCTGTAGCAG ATGGCTGGTCTGCAGAGATCTGTGGTGTCCTTCCGGCGGCAGGGATCTTCCGGTCTCGTTTGGGACGATAAATTCATATCGGAGGAGCTCAATAAGGCGCCGCAAAACGACGGAGAATCCAGCGCCGCGGCGGCAGAGGTGAAGACAGGAAGAAATATTCCGCCAATCAAGACGATTGACCGGAGCCGATCAAACCGCGTCGGAGGACGGGGATTCCGAAGTAAAGATACGGCGGCGCCGGCAGTGGAGCCGCCGTCGCCCAGAGTCTCTGCTTGTGGGCTCTGCAGTGGTTTCGGGAAATCGGGTGGCAAGAAACAGAGAGGGACGGCGGCTGGTAATCGCCGATCACGGAACCATGAAGCATCAGTGCACAGACTCCATTAGTGAATCATTGTAATGTTAATCATCTTGCTCCACTCAATACCTCCAATAATTTGCACTGTTACGTTCTTGCACATTCATACTTTCCACAAAATAATCTTAAAAACTTTAATTTCATCGTTTGTTCCATTTGTAAGGATCCATCCAAAATAGTCTGTAGCAG ATGGCTGGTCTGCAGAGATCTGTGGTGTCCTTCCGGCGGCAGGGATCTTCCGGTCTCGTTTGGGACGATAAATTCATATCGGAGGAGCTCAATAAGGCGCCGCAAAACGACGGAGAATCCAGCGCCGCGGCGGCAGAGGTGAAGACAGGAAGAAATATTCCGCCAATCAAGACGATTGACCGGAGCCGATCAAACCGCGTCGGAGGACGGGGATTCCGAAGTAAAGATACGGCGGCGCCGGCAGTGGAGCCGCCGTCGCCCAGAGTCTCTGCTTGTGGGCTCTGCAGTGGTTTCGGGAAATCGGGTGGCAAGAAACAGAGAGGGACGGCGGCTGGTAATCGCCGATCACGGAACCATGAAGCATCAGTGCACAGACTCCATTAG MAGLQRSVVSFRRQGSSGLVWDDKFISEELNKAPQNDGESSAAAAEVKTGRNIPPIKTIDRSRSNRVGGRGFRSKDTAAPAVEPPSPRVSACGLCSGFGKSGGKKQRGTAAGNRRSRNHEASVHRLH Homology
BLAST of Tan0008341 vs. ExPASy Swiss-Prot
Match: Q9SSC1 (MAPK kinase substrate protein At1g80180 OS=Arabidopsis thaliana OX=3702 GN=At1g80180 PE=1 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 3.3e-17 Identity = 61/138 (44.20%), Postives = 79/138 (57.25%), Query Frame = 0
BLAST of Tan0008341 vs. ExPASy Swiss-Prot
Match: Q9XI29 (Uncharacterized protein At1g15400 OS=Arabidopsis thaliana OX=3702 GN=At1g15400 PE=1 SV=2) HSP 1 Score: 87.0 bits (214), Expect = 1.6e-16 Identity = 62/141 (43.97%), Postives = 78/141 (55.32%), Query Frame = 0
BLAST of Tan0008341 vs. NCBI nr
Match: XP_022991595.1 (MAPK kinase substrate protein At1g80180-like [Cucurbita maxima]) HSP 1 Score: 194.1 bits (492), Expect = 7.2e-46 Identity = 102/117 (87.18%), Postives = 105/117 (89.74%), Query Frame = 0
BLAST of Tan0008341 vs. NCBI nr
Match: XP_023000641.1 (MAPK kinase substrate protein At1g80180-like [Cucurbita maxima]) HSP 1 Score: 192.2 bits (487), Expect = 2.7e-45 Identity = 98/118 (83.05%), Postives = 104/118 (88.14%), Query Frame = 0
BLAST of Tan0008341 vs. NCBI nr
Match: XP_023549291.1 (MAPK kinase substrate protein At1g80180-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 191.4 bits (485), Expect = 4.7e-45 Identity = 103/118 (87.29%), Postives = 105/118 (88.98%), Query Frame = 0
BLAST of Tan0008341 vs. NCBI nr
Match: KAG6575586.1 (MAPK kinase substrate protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 188.0 bits (476), Expect = 5.2e-44 Identity = 101/118 (85.59%), Postives = 105/118 (88.98%), Query Frame = 0
BLAST of Tan0008341 vs. NCBI nr
Match: KAG7014127.1 (MAPK kinase substrate protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 187.6 bits (475), Expect = 6.7e-44 Identity = 101/119 (84.87%), Postives = 105/119 (88.24%), Query Frame = 0
BLAST of Tan0008341 vs. ExPASy TrEMBL
Match: A0A6J1JTD9 (MAPK kinase substrate protein At1g80180-like OS=Cucurbita maxima OX=3661 GN=LOC111488162 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 3.5e-46 Identity = 102/117 (87.18%), Postives = 105/117 (89.74%), Query Frame = 0
BLAST of Tan0008341 vs. ExPASy TrEMBL
Match: A0A6J1KGD4 (MAPK kinase substrate protein At1g80180-like OS=Cucurbita maxima OX=3661 GN=LOC111494889 PE=4 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.3e-45 Identity = 98/118 (83.05%), Postives = 104/118 (88.14%), Query Frame = 0
BLAST of Tan0008341 vs. ExPASy TrEMBL
Match: A0A6J1HM35 (MAPK kinase substrate protein At1g80180-like OS=Cucurbita moschata OX=3662 GN=LOC111464222 PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 1.8e-42 Identity = 95/120 (79.17%), Postives = 102/120 (85.00%), Query Frame = 0
BLAST of Tan0008341 vs. ExPASy TrEMBL
Match: A0A5D3CFK2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002140 PE=4 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 4.4e-41 Identity = 91/117 (77.78%), Postives = 102/117 (87.18%), Query Frame = 0
BLAST of Tan0008341 vs. ExPASy TrEMBL
Match: A0A1S3CEE2 (uncharacterized protein At1g15400-like OS=Cucumis melo OX=3656 GN=LOC103499785 PE=4 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 4.4e-41 Identity = 91/117 (77.78%), Postives = 102/117 (87.18%), Query Frame = 0
BLAST of Tan0008341 vs. TAIR 10
Match: AT1G80180.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15400.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 89.4 bits (220), Expect = 2.3e-18 Identity = 61/138 (44.20%), Postives = 79/138 (57.25%), Query Frame = 0
BLAST of Tan0008341 vs. TAIR 10
Match: AT1G15400.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast hits to 82 proteins in 16 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). ) HSP 1 Score: 87.0 bits (214), Expect = 1.2e-17 Identity = 62/141 (43.97%), Postives = 78/141 (55.32%), Query Frame = 0
BLAST of Tan0008341 vs. TAIR 10
Match: AT1G15400.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast hits to 82 proteins in 16 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). ) HSP 1 Score: 87.0 bits (214), Expect = 1.2e-17 Identity = 62/141 (43.97%), Postives = 78/141 (55.32%), Query Frame = 0
BLAST of Tan0008341 vs. TAIR 10
Match: AT1G15400.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 84 Blast hits to 84 proteins in 17 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). ) HSP 1 Score: 87.0 bits (214), Expect = 1.2e-17 Identity = 62/141 (43.97%), Postives = 78/141 (55.32%), Query Frame = 0
BLAST of Tan0008341 vs. TAIR 10
Match: AT5G20100.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 76.6 bits (187), Expect = 1.6e-14 Identity = 45/107 (42.06%), Postives = 64/107 (59.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|