Tan0008207 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGAAAAAACCCATTCCATGACTTTAGACATTAATGTCGTTTCAGCCAAAGGCCTCACTGGAGTTGACGCCACTTCCAAGACGAATCTATACGTCGTCGTTTCAATCACCGGCGCCGCCCAGAACGAGCAGAAGGCTCAGACCCACGTGGACAAAAACAGCGGAGGAAATCCTACGTGGAACTTTCCGGTGAAATTCGCCGTCGACGTGGACGGATTAAAACAAGATCTCAAAACTCGTCTTGTTTTTGCTCTTAAATGCGAGGATGGGAAAGGAGATGGAGATTTAGGCGAAGTCCACGTGTCGATTGCTGAGCTTTTGCAGTCCGCTGGAGATGGAAACTCCATGCAGTACGTCGTCGTTTCATATCCGGTTAAAAAACCGTCAGGACAGACGGCGGGCGTGCTGAATTTTGAATACAAATTTGGCGGTTCTCCGACGAGTGATACTCCGGCCGCTGGTTTTGCCCCCAGGTATGAAACTAGAAATGAATTAGGACGTATTTGATAAGTAATCTAAAAATAGAAATTTGAAAATCAGAACAAGTATTTCATATTTTAAAATATGTGTTTAGTAACAAAATTTTATTTTAAACACTTTTTTTAAAGTGGGTTCTATAATATTTTTATAAATCATGAAATTAGTTATAGTTGCAAAACTAAATATTAGCTTCAATATAAGTCATTATTAATTAATATATGAACATGTTTTTTTTTTATAAATTTTGTATAAATATTATCTTATATAATTTATTATGTATTATATTATGTTTTATATTGAACCTAATATAATTTATAATGTATTATATTATGCCTATTTTAATTTAACAAAATTAAATTGAGTTTATAATCTAAAATATTATATGTATTAATACTTTTATCTTTGTTTAATATAATTCAACATTTTAAAATTTTAAATCTAGAATTTGAATACAATTAAAACATAAAAAAATGTTGTTTTCAGACTTTCTACTATTTGGATTACAGGATTTAAAAACAATTTTTAAAAACACATCTGTCAAACACATATTCACTGAATTCATGAATAAAAAATATAAAATAGAATTCGGATTGCCTACCAAAACAAACCCTTAATAAATGGTAATTGTTCCAACTTTTAATTTTGTATTGTCATATTTGATATTTTTAAAAATTAACAAATTTATTAAACATAAAATTGAATTTTATGTCTATGTCTAACATAATGTTAAACTTTTAATTTTGTATATAATAAATCTATGAATTTAAAAAAAAAGTCGAATAAGTCAAGAATTTATTAGACACAAAATTAAAAGTTCAAAGGTTGATAACTAAGTAAAAGTTCAAACACCTATTAAATATGTTTTAAAATTTAAAGAGCTGATACACTTAAACTTTAGTTTAGAGACTAAATTTAACATTTAAACCATTAACCAAAATTCAGAAAATAACAACAGAAACCTATTCAAATGAAAAAATAATAAACATAAATTTCATCTCATCACAAAAAGTAAATAAATTCTTGATATTATCTGAAATAATTAAATTGTAATTATTAAGTTAAAAACGGTTTAATAAACTTAACTTAAAAAAGTGTTTAATAGATTTCTCAATTTTAGTATAATTTCTAATAGATTATTAACTTTTTGATTTTATGTATAATAATTAAGTCTATGATTTATTTAACATTTTAAATAGTTATGGATCTATTAGACATAAAATTGATTTTTTTTCTAATGAGTTTATAAGTTCTAAAAGTTGTGTGAATAAATTTATAAATCTAAGATATACAAAATTAAAACTTTTGAGATTTATTATATATTTTATAGTTTTAGAGACTTACTTAAATTTTGAGTCATTTTCAATCACATATTTTTTCTATTTCTTATTAAAAACATTTTTTTTCATGGTTTGAAAACTGGAATATGGGTTAAATTTCTTTAACATGTGGGCTTGAAAATCAATAATAATTAATTGAAGAGAAAACAATTTATAATTTTATAGAAAAGTTCGAACTCATGACTTTTGCTCTGATATGATGATAAATCACTAAATCTAATTATATTAACATACTCTACGTAACCTTATTTTTAACTACAAATTTTTTCTATTTAGAATAAAATCATCTTTTTTTCATGCGTTGAAAATTGGGAATGCATGGGGAGTTGCAGCCAAGTATTTTATTACATTATTTCAAATGATTTTTTAGATTTCAATTAATCATATTTCTTTATCCCAATCGGACGGTTAATAACTTTCTTTTTCAGCACTACCAGGAAAGTCAGTGGATATCCACCACAAGGATACTATTATCATCCGCCACCACCGGCGGGGGCAGGATACGGCGGCTACCCACCATCACCACAGCCGTACGGTCCATATCCACCACCGTCACCTTCTCACTACATGCCGCCGCCACCATACCCACCATACAACGTCGGACCATCAGCAGCGCCGCCGTATATTGCATATCCATATCCACCACATCCAAGTCACGTGCAGGCACGTGGACCTCCGGTTGTGCAACGGTCGCCGCCGAAGAAGAAATCGGGTTGGGGATCAGCACTGGGTGTGGTCGGTGCCCTTGCAATCGGAGCTCTCTCCGGCGGATCGGTGCCGGATGTCTCCGACTTGACCTCCGGATATTAA ATGGCTGAAAAAACCCATTCCATGACTTTAGACATTAATGTCGTTTCAGCCAAAGGCCTCACTGGAGTTGACGCCACTTCCAAGACGAATCTATACGTCGTCGTTTCAATCACCGGCGCCGCCCAGAACGAGCAGAAGGCTCAGACCCACGTGGACAAAAACAGCGGAGGAAATCCTACGTGGAACTTTCCGGTGAAATTCGCCGTCGACGTGGACGGATTAAAACAAGATCTCAAAACTCGTCTTGTTTTTGCTCTTAAATGCGAGGATGGGAAAGGAGATGGAGATTTAGGCGAAGTCCACGTGTCGATTGCTGAGCTTTTGCAGTCCGCTGGAGATGGAAACTCCATGCACACTACCAGGAAAGTCAGTGGATATCCACCACAAGGATACTATTATCATCCGCCACCACCGGCGGGGGCAGGATACGGCGGCTACCCACCATCACCACAGCCGTACGGTCCATATCCACCACCGTCACCTTCTCACTACATGCCGCCGCCACCATACCCACCATACAACGTCGGACCATCAGCAGCGCCGCCGTATATTGCATATCCATATCCACCACATCCAAGTCACGTGCAGGCACGTGGACCTCCGGTTGTGCAACGGTCGCCGCCGAAGAAGAAATCGGGTTGGGGATCAGCACTGGGTGTGGTCGGTGCCCTTGCAATCGGAGCTCTCTCCGGCGGATCGGTGCCGGATGTCTCCGACTTGACCTCCGGATATTAA ATGGCTGAAAAAACCCATTCCATGACTTTAGACATTAATGTCGTTTCAGCCAAAGGCCTCACTGGAGTTGACGCCACTTCCAAGACGAATCTATACGTCGTCGTTTCAATCACCGGCGCCGCCCAGAACGAGCAGAAGGCTCAGACCCACGTGGACAAAAACAGCGGAGGAAATCCTACGTGGAACTTTCCGGTGAAATTCGCCGTCGACGTGGACGGATTAAAACAAGATCTCAAAACTCGTCTTGTTTTTGCTCTTAAATGCGAGGATGGGAAAGGAGATGGAGATTTAGGCGAAGTCCACGTGTCGATTGCTGAGCTTTTGCAGTCCGCTGGAGATGGAAACTCCATGCACACTACCAGGAAAGTCAGTGGATATCCACCACAAGGATACTATTATCATCCGCCACCACCGGCGGGGGCAGGATACGGCGGCTACCCACCATCACCACAGCCGTACGGTCCATATCCACCACCGTCACCTTCTCACTACATGCCGCCGCCACCATACCCACCATACAACGTCGGACCATCAGCAGCGCCGCCGTATATTGCATATCCATATCCACCACATCCAAGTCACGTGCAGGCACGTGGACCTCCGGTTGTGCAACGGTCGCCGCCGAAGAAGAAATCGGGTTGGGGATCAGCACTGGGTGTGGTCGGTGCCCTTGCAATCGGAGCTCTCTCCGGCGGATCGGTGCCGGATGTCTCCGACTTGACCTCCGGATATTAA MAEKTHSMTLDINVVSAKGLTGVDATSKTNLYVVVSITGAAQNEQKAQTHVDKNSGGNPTWNFPVKFAVDVDGLKQDLKTRLVFALKCEDGKGDGDLGEVHVSIAELLQSAGDGNSMHTTRKVSGYPPQGYYYHPPPPAGAGYGGYPPSPQPYGPYPPPSPSHYMPPPPYPPYNVGPSAAPPYIAYPYPPHPSHVQARGPPVVQRSPPKKKSGWGSALGVVGALAIGALSGGSVPDVSDLTSGY Homology
BLAST of Tan0008207 vs. ExPASy Swiss-Prot
Match: O04133 (Protein SRC2 OS=Glycine max OX=3847 GN=SRC2 PE=2 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 6.7e-19 Identity = 96/275 (34.91%), Postives = 132/275 (48.00%), Query Frame = 0
BLAST of Tan0008207 vs. ExPASy Swiss-Prot
Match: O04023 (Protein SRC2 homolog OS=Arabidopsis thaliana OX=3702 GN=SRC2 PE=1 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 5.0e-06 Identity = 65/193 (33.68%), Postives = 88/193 (45.60%), Query Frame = 0
BLAST of Tan0008207 vs. NCBI nr
Match: XP_022930477.1 (protein SRC2-like [Cucurbita moschata]) HSP 1 Score: 265.4 bits (677), Expect = 4.9e-67 Identity = 174/334 (52.10%), Postives = 195/334 (58.38%), Query Frame = 0
BLAST of Tan0008207 vs. NCBI nr
Match: KAG6593964.1 (Protein SRC2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026305.1 Protein SRC2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 263.1 bits (671), Expect = 2.4e-66 Identity = 172/334 (51.50%), Postives = 193/334 (57.78%), Query Frame = 0
BLAST of Tan0008207 vs. NCBI nr
Match: XP_023000192.1 (protein SRC2-like [Cucurbita maxima]) HSP 1 Score: 261.5 bits (667), Expect = 7.1e-66 Identity = 173/327 (52.91%), Postives = 195/327 (59.63%), Query Frame = 0
BLAST of Tan0008207 vs. NCBI nr
Match: XP_023514436.1 (protein SRC2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 256.9 bits (655), Expect = 1.7e-64 Identity = 168/327 (51.38%), Postives = 190/327 (58.10%), Query Frame = 0
BLAST of Tan0008207 vs. NCBI nr
Match: XP_038875073.1 (protein SRC2-like [Benincasa hispida]) HSP 1 Score: 229.6 bits (584), Expect = 3.0e-56 Identity = 167/358 (46.65%), Postives = 189/358 (52.79%), Query Frame = 0
BLAST of Tan0008207 vs. ExPASy TrEMBL
Match: A0A6J1EQL9 (protein SRC2-like OS=Cucurbita moschata OX=3662 GN=LOC111436917 PE=4 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 2.4e-67 Identity = 174/334 (52.10%), Postives = 195/334 (58.38%), Query Frame = 0
BLAST of Tan0008207 vs. ExPASy TrEMBL
Match: A0A6J1KCY8 (protein SRC2-like OS=Cucurbita maxima OX=3661 GN=LOC111494483 PE=4 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 3.4e-66 Identity = 173/327 (52.91%), Postives = 195/327 (59.63%), Query Frame = 0
BLAST of Tan0008207 vs. ExPASy TrEMBL
Match: A0A6J1CDH2 (protein SRC2-like OS=Momordica charantia OX=3673 GN=LOC111009729 PE=4 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 4.6e-55 Identity = 162/311 (52.09%), Postives = 181/311 (58.20%), Query Frame = 0
BLAST of Tan0008207 vs. ExPASy TrEMBL
Match: A0A1S3C7E6 (protein SRC2-like OS=Cucumis melo OX=3656 GN=LOC103497863 PE=4 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 1.5e-45 Identity = 156/341 (45.75%), Postives = 177/341 (51.91%), Query Frame = 0
BLAST of Tan0008207 vs. ExPASy TrEMBL
Match: A0A6N2K885 (C2 domain-containing protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS19890 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 1.6e-26 Identity = 113/308 (36.69%), Postives = 143/308 (46.43%), Query Frame = 0
BLAST of Tan0008207 vs. TAIR 10
Match: AT3G16510.1 (Calcium-dependent lipid-binding (CaLB domain) family protein ) HSP 1 Score: 65.9 bits (159), Expect = 5.3e-11 Identity = 87/267 (32.58%), Postives = 113/267 (42.32%), Query Frame = 0
BLAST of Tan0008207 vs. TAIR 10
Match: AT4G15740.1 (Calcium-dependent lipid-binding (CaLB domain) family protein ) HSP 1 Score: 65.5 bits (158), Expect = 6.9e-11 Identity = 59/159 (37.11%), Postives = 80/159 (50.31%), Query Frame = 0
BLAST of Tan0008207 vs. TAIR 10
Match: AT1G09070.1 (soybean gene regulated by cold-2 ) HSP 1 Score: 53.1 bits (126), Expect = 3.6e-07 Identity = 65/193 (33.68%), Postives = 88/193 (45.60%), Query Frame = 0
BLAST of Tan0008207 vs. TAIR 10
Match: AT4G15755.1 (Calcium-dependent lipid-binding (CaLB domain) family protein ) HSP 1 Score: 51.2 bits (121), Expect = 1.3e-06 Identity = 55/186 (29.57%), Postives = 88/186 (47.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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