Tan0008169 (gene) Snake gourd v1

Overview


Name	Tan0008169
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	BEST Arabidopsis thaliana protein match is: s in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Location	LG08: 10461110 .. 10461688 (+)
RNA-Seq Expression	Tan0008169
Synteny	Tan0008169

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGGAAAATTTCATTGGGATGTGAAGAACAAAGCCATATCAAGAACTTCTTCAGTTGGTTGTTCTTCTCGCAGCATTTATTATTATGGAACAGCTCAAGGAGTTCCTTTCAAATGGGAAACACAACCAGGAACACCCAAAGATCCACCCCCTCAAGAGATCCTTCCTCCCCTCAGCCCTCCGCCCGCCGTTCTCAGCCTCGGGGTATCGAAACCGTGCATCGAACAACCGAAAACCCGACCCCGACTGCGAATGAGGCTTAGGTTTTGGAGGGGAGGCAAAAAGAGTAGGGATAGTGAGAGAGCTTCCCAAGCAACAACTATAGACTATAACAAAGAAGATCCTTTTGGTCATAATGATAAGTTGGAAACTTTTTCATTTTTTAGTTATGATTGTGAGTTCATGGCATCTCCTCAGGGTTCGATGTCATCGTCCTCGTCCTCATCGTCTTCTTCATCGCCATCGCTTTTGCTCGAGTCATTAACCGTACGCAATATGGGGAGGGTGTCATTTCGAAGGCCTCCGAGTTCAAGTGTTTGGCAAATTAATCGAATTCTGTCTTGTTACCATTGCTAG

mRNA sequence

ATGGATGGAAAATTTCATTGGGATGTGAAGAACAAAGCCATATCAAGAACTTCTTCAGTTGGTTGTTCTTCTCGCAGCATTTATTATTATGGAACAGCTCAAGGAGTTCCTTTCAAATGGGAAACACAACCAGGAACACCCAAAGATCCACCCCCTCAAGAGATCCTTCCTCCCCTCAGCCCTCCGCCCGCCGTTCTCAGCCTCGGGGTATCGAAACCGTGCATCGAACAACCGAAAACCCGACCCCGACTGCGAATGAGGCTTAGGTTTTGGAGGGGAGGCAAAAAGAGTAGGGATAGTGAGAGAGCTTCCCAAGCAACAACTATAGACTATAACAAAGAAGATCCTTTTGGTCATAATGATAAGTTGGAAACTTTTTCATTTTTTAGTTATGATTGTGAGTTCATGGCATCTCCTCAGGGTTCGATGTCATCGTCCTCGTCCTCATCGTCTTCTTCATCGCCATCGCTTTTGCTCGAGTCATTAACCGTACGCAATATGGGGAGGGTGTCATTTCGAAGGCCTCCGAGTTCAAGTGTTTGGCAAATTAATCGAATTCTGTCTTGTTACCATTGCTAG

Coding sequence (CDS)

ATGGATGGAAAATTTCATTGGGATGTGAAGAACAAAGCCATATCAAGAACTTCTTCAGTTGGTTGTTCTTCTCGCAGCATTTATTATTATGGAACAGCTCAAGGAGTTCCTTTCAAATGGGAAACACAACCAGGAACACCCAAAGATCCACCCCCTCAAGAGATCCTTCCTCCCCTCAGCCCTCCGCCCGCCGTTCTCAGCCTCGGGGTATCGAAACCGTGCATCGAACAACCGAAAACCCGACCCCGACTGCGAATGAGGCTTAGGTTTTGGAGGGGAGGCAAAAAGAGTAGGGATAGTGAGAGAGCTTCCCAAGCAACAACTATAGACTATAACAAAGAAGATCCTTTTGGTCATAATGATAAGTTGGAAACTTTTTCATTTTTTAGTTATGATTGTGAGTTCATGGCATCTCCTCAGGGTTCGATGTCATCGTCCTCGTCCTCATCGTCTTCTTCATCGCCATCGCTTTTGCTCGAGTCATTAACCGTACGCAATATGGGGAGGGTGTCATTTCGAAGGCCTCCGAGTTCAAGTGTTTGGCAAATTAATCGAATTCTGTCTTGTTACCATTGCTAG

Protein sequence

MDGKFHWDVKNKAISRTSSVGCSSRSIYYYGTAQGVPFKWETQPGTPKDPPPQEILPPLSPPPAVLSLGVSKPCIEQPKTRPRLRMRLRFWRGGKKSRDSERASQATTIDYNKEDPFGHNDKLETFSFFSYDCEFMASPQGSMSSSSSSSSSSSPSLLLESLTVRNMGRVSFRRPPSSSVWQINRILSCYHC

Homology

[Close]

BLAST of Tan0008169 vs. NCBI nr
Match: XP_022997465.1 (uncharacterized protein LOC111492375 [Cucurbita maxima])

HSP 1 Score: 269.6 bits (688), Expect = 2.0e-68
Identity = 141/192 (73.44%), Postives = 160/192 (83.33%), Query Frame = 0


Query: 1   MDGKFHWDVKNKAISRTSSVGCSSRSIYYYGTAQGVPFKWETQPGTPKDPPPQEILPPLS 60
           MDG FHWD+K+K I+RTSS+GCSSRS YY G A+GVPFKWETQPGTPKDPPPQ++LPPLS
Sbjct: 1   MDGNFHWDMKSKVIARTSSIGCSSRSTYYCGAAEGVPFKWETQPGTPKDPPPQDLLPPLS 60

Query: 61  PPPAVLSLGVSKPCIEQPKTRPRLRMRLRFWRGGKKSRDSERASQATTIDYNKEDPFGHN 120
           PPPAVLSLG+  PCIE+PKTRPR  M+LRFWR  KKSRD  RA+QATTIDY+       N
Sbjct: 61  PPPAVLSLGLPLPCIEKPKTRPRPTMKLRFWRRVKKSRDDGRAAQATTIDYS-------N 120

Query: 121 DKLETFSFFSYDCEFMASPQGSMSSSSSSSSSSSPSLLLESLTVRNMGRVSFRRPPS-SS 180
            KLETFSF S DCEFMASP+ SMSSSSSSSSSSSPS L+ESLTVR+MGRVS  RP S  +
Sbjct: 121 GKLETFSFLSSDCEFMASPRDSMSSSSSSSSSSSPSSLIESLTVRHMGRVSLGRPSSCGT 180

Query: 181 VWQINRILSCYH 192
             +I+RIL+CYH
Sbjct: 181 AGKIHRILACYH 185

[Close]

BLAST of Tan0008169 vs. NCBI nr
Match: KAG7029810.1 (hypothetical protein SDJN02_08153, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 263.8 bits (673), Expect = 1.1e-66
Identity = 141/194 (72.68%), Postives = 160/194 (82.47%), Query Frame = 0


Query: 1   MDGKFHWDVKNKAISRTSSVGCSSRSIYYYGTAQGVPFKWETQPGTPKDPPPQEILPPLS 60
           MDG FHWD+K+K I+RTSS+GCSSRS YY G A+GVPFKWETQPGTPKDPPPQ++LPPLS
Sbjct: 1   MDGNFHWDMKSKVIARTSSIGCSSRSTYYCGAAEGVPFKWETQPGTPKDPPPQDLLPPLS 60

Query: 61  PPPAVLSLGVSKPCIEQPKTRPRLR--MRLRFWRGGKKSRDSERASQATTIDYNKEDPFG 120
           PPPAV+SLG+  PCIE+PKTRPR R  M+LRFWR  KKSRD  RA+QATTIDY+      
Sbjct: 61  PPPAVISLGLPLPCIEKPKTRPRPRPTMKLRFWRRVKKSRDGGRAAQATTIDYS------ 120

Query: 121 HNDKLETFSFFSYDCEFMASPQGSMSSSSSSSSSSSPSLLLESLTVRNMGRVSFRRPPS- 180
            NDKLETFSF S DCEFMASP+ SM   SSSSSSSSPS L+ESLTVRNMGRVS  RP S 
Sbjct: 121 -NDKLETFSFLSSDCEFMASPRDSM---SSSSSSSSPSSLIESLTVRNMGRVSLGRPSSC 180

Query: 181 SSVWQINRILSCYH 192
           S+  +I+RIL+CYH
Sbjct: 181 STAGKIHRILACYH 184

[Close]

BLAST of Tan0008169 vs. NCBI nr
Match: XP_022929606.1 (uncharacterized protein LOC111436141 [Cucurbita moschata])

HSP 1 Score: 263.5 bits (672), Expect = 1.5e-66
Identity = 139/192 (72.40%), Postives = 158/192 (82.29%), Query Frame = 0


Query: 1   MDGKFHWDVKNKAISRTSSVGCSSRSIYYYGTAQGVPFKWETQPGTPKDPPPQEILPPLS 60
           MDG FHWD+K+K I+RTSS+GCSSRS YY G A+GVPFKWETQPGTPKDPPPQ++LPPLS
Sbjct: 1   MDGNFHWDMKSKVIARTSSIGCSSRSTYYCGAAEGVPFKWETQPGTPKDPPPQDLLPPLS 60

Query: 61  PPPAVLSLGVSKPCIEQPKTRPRLRMRLRFWRGGKKSRDSERASQATTIDYNKEDPFGHN 120
           PPPAV+SLG+  PCIE+PKTRPR  M+L FWR  KKSRD  RA+QATTIDY+       N
Sbjct: 61  PPPAVISLGLPLPCIEKPKTRPRPTMKLWFWRRVKKSRDGGRAAQATTIDYS-------N 120

Query: 121 DKLETFSFFSYDCEFMASPQGSMSSSSSSSSSSSPSLLLESLTVRNMGRVSFRRPPS-SS 180
           DKLETFSF S DCEFMASP+ SM   SSSSSSSSPS L+ESLTVRNMGRVS  RP S S+
Sbjct: 121 DKLETFSFLSSDCEFMASPRDSM---SSSSSSSSPSSLIESLTVRNMGRVSLGRPSSCST 180

Query: 181 VWQINRILSCYH 192
             +I+RIL+CYH
Sbjct: 181 AGKIHRILACYH 182

[Close]

BLAST of Tan0008169 vs. NCBI nr
Match: XP_022153305.1 (uncharacterized protein LOC111020830 [Momordica charantia])

HSP 1 Score: 260.8 bits (665), Expect = 9.5e-66
Identity = 139/192 (72.40%), Postives = 150/192 (78.12%), Query Frame = 0


Query: 1   MDGKFHWDVKNKAISRTSSVGCSSRSIYYYGTAQGVPFKWETQPGTPKDPPPQEILPPLS 60
           MDGKFHWD K+K ISRTSSVGCSSRSIYY GTA+GVPFKWETQPGTPKDPPPQE+LPPLS
Sbjct: 1   MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPLS 60

Query: 61  PPPAVLSLGVSKPCIEQPKTRPRLRMRLRFWRGGKKSRDSERASQATTIDYNKEDPFGHN 120
           PPPAVLSLG+ KPCIE+P  RPRLRM LRFWR  +K R++              D FGH 
Sbjct: 61  PPPAVLSLGLPKPCIERPNPRPRLRMSLRFWRKSEKKREN-------------GDGFGHP 120

Query: 121 DKLETFSFFSYDCEFMASPQGSMSSSSSSSSSSSPSLLLESLTVRNMGRVSFRRPPSSSV 180
           DKLET SF S D EFMASP+ S+SS SSSSSSS PS LLESL VRNMGRVSF RP     
Sbjct: 121 DKLETSSFMSSDGEFMASPRDSVSSLSSSSSSSLPSSLLESLNVRNMGRVSFGRP----- 174

Query: 181 WQINRILSCYHC 193
           WQINR L+CYHC
Sbjct: 181 WQINRFLACYHC 174

[Close]

BLAST of Tan0008169 vs. NCBI nr
Match: XP_023546389.1 (uncharacterized protein LOC111805512 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 260.8 bits (665), Expect = 9.5e-66
Identity = 137/192 (71.35%), Postives = 157/192 (81.77%), Query Frame = 0


Query: 1   MDGKFHWDVKNKAISRTSSVGCSSRSIYYYGTAQGVPFKWETQPGTPKDPPPQEILPPLS 60
           MDG FHWD+K+K I+RTSS+GCSSRS YY G A+GVPF WETQPGTPKDPPPQ++LPPLS
Sbjct: 1   MDGNFHWDMKSKVIARTSSIGCSSRSTYYCGAAEGVPFVWETQPGTPKDPPPQDLLPPLS 60

Query: 61  PPPAVLSLGVSKPCIEQPKTRPRLRMRLRFWRGGKKSRDSERASQATTIDYNKEDPFGHN 120
           PPPAV+SLG+  PCIE+PKTRPR  M+LRFWR  KKSRD  RA+QATTIDY+       N
Sbjct: 61  PPPAVISLGLPLPCIEKPKTRPRPTMKLRFWRRVKKSRDGGRAAQATTIDYS-------N 120

Query: 121 DKLETFSFFSYDCEFMASPQGSMSSSSSSSSSSSPSLLLESLTVRNMGRVSFRRPPS-SS 180
           DKLETFSF S DCEFMASP+ SM   SSSSSSSSPS L+ESLTV+NMGR S  RP S S+
Sbjct: 121 DKLETFSFLSSDCEFMASPRDSM---SSSSSSSSPSSLIESLTVQNMGRASLGRPSSCST 180

Query: 181 VWQINRILSCYH 192
             +I+RIL+CYH
Sbjct: 181 AGKIHRILACYH 182

[Close]

BLAST of Tan0008169 vs. ExPASy TrEMBL
Match: A0A6J1K9Q8 (uncharacterized protein LOC111492375 OS=Cucurbita maxima OX=3661 GN=LOC111492375 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 9.9e-69
Identity = 141/192 (73.44%), Postives = 160/192 (83.33%), Query Frame = 0


Query: 1   MDGKFHWDVKNKAISRTSSVGCSSRSIYYYGTAQGVPFKWETQPGTPKDPPPQEILPPLS 60
           MDG FHWD+K+K I+RTSS+GCSSRS YY G A+GVPFKWETQPGTPKDPPPQ++LPPLS
Sbjct: 1   MDGNFHWDMKSKVIARTSSIGCSSRSTYYCGAAEGVPFKWETQPGTPKDPPPQDLLPPLS 60

Query: 61  PPPAVLSLGVSKPCIEQPKTRPRLRMRLRFWRGGKKSRDSERASQATTIDYNKEDPFGHN 120
           PPPAVLSLG+  PCIE+PKTRPR  M+LRFWR  KKSRD  RA+QATTIDY+       N
Sbjct: 61  PPPAVLSLGLPLPCIEKPKTRPRPTMKLRFWRRVKKSRDDGRAAQATTIDYS-------N 120

Query: 121 DKLETFSFFSYDCEFMASPQGSMSSSSSSSSSSSPSLLLESLTVRNMGRVSFRRPPS-SS 180
            KLETFSF S DCEFMASP+ SMSSSSSSSSSSSPS L+ESLTVR+MGRVS  RP S  +
Sbjct: 121 GKLETFSFLSSDCEFMASPRDSMSSSSSSSSSSSPSSLIESLTVRHMGRVSLGRPSSCGT 180

Query: 181 VWQINRILSCYH 192
             +I+RIL+CYH
Sbjct: 181 AGKIHRILACYH 185

[Close]

BLAST of Tan0008169 vs. ExPASy TrEMBL
Match: A0A6J1ENL5 (uncharacterized protein LOC111436141 OS=Cucurbita moschata OX=3662 GN=LOC111436141 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 7.1e-67
Identity = 139/192 (72.40%), Postives = 158/192 (82.29%), Query Frame = 0


Query: 1   MDGKFHWDVKNKAISRTSSVGCSSRSIYYYGTAQGVPFKWETQPGTPKDPPPQEILPPLS 60
           MDG FHWD+K+K I+RTSS+GCSSRS YY G A+GVPFKWETQPGTPKDPPPQ++LPPLS
Sbjct: 1   MDGNFHWDMKSKVIARTSSIGCSSRSTYYCGAAEGVPFKWETQPGTPKDPPPQDLLPPLS 60

Query: 61  PPPAVLSLGVSKPCIEQPKTRPRLRMRLRFWRGGKKSRDSERASQATTIDYNKEDPFGHN 120
           PPPAV+SLG+  PCIE+PKTRPR  M+L FWR  KKSRD  RA+QATTIDY+       N
Sbjct: 61  PPPAVISLGLPLPCIEKPKTRPRPTMKLWFWRRVKKSRDGGRAAQATTIDYS-------N 120

Query: 121 DKLETFSFFSYDCEFMASPQGSMSSSSSSSSSSSPSLLLESLTVRNMGRVSFRRPPS-SS 180
           DKLETFSF S DCEFMASP+ SM   SSSSSSSSPS L+ESLTVRNMGRVS  RP S S+
Sbjct: 121 DKLETFSFLSSDCEFMASPRDSM---SSSSSSSSPSSLIESLTVRNMGRVSLGRPSSCST 180

Query: 181 VWQINRILSCYH 192
             +I+RIL+CYH
Sbjct: 181 AGKIHRILACYH 182

[Close]

BLAST of Tan0008169 vs. ExPASy TrEMBL
Match: A0A6J1DGF8 (uncharacterized protein LOC111020830 OS=Momordica charantia OX=3673 GN=LOC111020830 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 4.6e-66
Identity = 139/192 (72.40%), Postives = 150/192 (78.12%), Query Frame = 0


Query: 1   MDGKFHWDVKNKAISRTSSVGCSSRSIYYYGTAQGVPFKWETQPGTPKDPPPQEILPPLS 60
           MDGKFHWD K+K ISRTSSVGCSSRSIYY GTA+GVPFKWETQPGTPKDPPPQE+LPPLS
Sbjct: 1   MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPLS 60

Query: 61  PPPAVLSLGVSKPCIEQPKTRPRLRMRLRFWRGGKKSRDSERASQATTIDYNKEDPFGHN 120
           PPPAVLSLG+ KPCIE+P  RPRLRM LRFWR  +K R++              D FGH 
Sbjct: 61  PPPAVLSLGLPKPCIERPNPRPRLRMSLRFWRKSEKKREN-------------GDGFGHP 120

Query: 121 DKLETFSFFSYDCEFMASPQGSMSSSSSSSSSSSPSLLLESLTVRNMGRVSFRRPPSSSV 180
           DKLET SF S D EFMASP+ S+SS SSSSSSS PS LLESL VRNMGRVSF RP     
Sbjct: 121 DKLETSSFMSSDGEFMASPRDSVSSLSSSSSSSLPSSLLESLNVRNMGRVSFGRP----- 174

Query: 181 WQINRILSCYHC 193
           WQINR L+CYHC
Sbjct: 181 WQINRFLACYHC 174

[Close]

BLAST of Tan0008169 vs. ExPASy TrEMBL
Match: A0A5D3BQA0 (Putative OSBP(Oxysterol binding protein)-related protein 4B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00410 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 2.0e-61
Identity = 137/197 (69.54%), Postives = 157/197 (79.70%), Query Frame = 0


Query: 1   MDGK-FHWDVKNKAISRTSSVGCSSRSIYYYGTA-QGVPFKWETQPGTPKDPPPQEILPP 60
           M+G+ FHWD+KNK ISRTSS+GCSS SIYY GTA QGVPFKWETQPGTPKDPPPQ++LPP
Sbjct: 1   MEGQLFHWDMKNKVISRTSSIGCSSHSIYYSGTANQGVPFKWETQPGTPKDPPPQDLLPP 60

Query: 61  LSPPPAVLSLGVSKP-CIEQPKTRPRLRMRLRFWRGGKKSRDSERASQATTIDYNKEDPF 120
           LSPPPAVLSLGV KP CI+QPK+R   RMRLRFW+   KSRD  RA+Q T ID+      
Sbjct: 61  LSPPPAVLSLGVPKPACIDQPKSRSLPRMRLRFWKKIMKSRDGGRAAQTTPIDH------ 120

Query: 121 GHNDKLETFSFFSYDCEFMA--SPQGSMSSSSSSSSSSSPSLLLESLTVRNMGRVSFRRP 180
            +NDKLETFSF S DCEFMA  SP+ SMSSSS+SSSSSSPS  ++SL V N  +VSF RP
Sbjct: 121 -YNDKLETFSFLSSDCEFMASPSPRDSMSSSSTSSSSSSPSSFIDSLNVGNTQKVSFGRP 180

Query: 181 PS-SSVWQINRILSCYH 192
            S ++ WQINR+L CYH
Sbjct: 181 SSWNNAWQINRMLVCYH 190

[Close]

BLAST of Tan0008169 vs. ExPASy TrEMBL
Match: A0A5A7UK88 (Putative OSBP(Oxysterol binding protein)-related protein 4B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold222G00410 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 7.6e-61
Identity = 136/197 (69.04%), Postives = 156/197 (79.19%), Query Frame = 0


Query: 1   MDGK-FHWDVKNKAISRTSSVGCSSRSIYYYGTA-QGVPFKWETQPGTPKDPPPQEILPP 60
           M+G+ FHWD+KNK ISRTSS+GCSS SIYY GTA QGVPFKWETQPGTPKDPPPQ++LPP
Sbjct: 1   MEGQLFHWDMKNKVISRTSSIGCSSHSIYYSGTANQGVPFKWETQPGTPKDPPPQDLLPP 60

Query: 61  LSPPPAVLSLGVSKP-CIEQPKTRPRLRMRLRFWRGGKKSRDSERASQATTIDYNKEDPF 120
           LSPPPAVLSLGV KP CI+QPK+R   RMRLRFW+   KSRD  RA+Q T ID+      
Sbjct: 61  LSPPPAVLSLGVPKPACIDQPKSRSLPRMRLRFWKKIMKSRDGGRAAQTTPIDH------ 120

Query: 121 GHNDKLETFSFFSYDCEFMA--SPQGSMSSSSSSSSSSSPSLLLESLTVRNMGRVSFRRP 180
            +NDKLETFSF S DCEFMA  SP+  MSSSS+SSSSSSPS  ++SL V N  +VSF RP
Sbjct: 121 -YNDKLETFSFLSSDCEFMASPSPRDPMSSSSTSSSSSSPSSFIDSLNVGNTQKVSFGRP 180

Query: 181 PS-SSVWQINRILSCYH 192
            S ++ WQINR+L CYH
Sbjct: 181 SSWNNAWQINRMLVCYH 190

[Close]

BLAST of Tan0008169 vs. TAIR 10
Match: AT4G25845.1 (BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4B (TAIR:AT4G25850.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 71.6 bits (174), Expect = 7.6e-13
Identity = 42/86 (48.84%), Postives = 57/86 (66.28%), Query Frame = 0


Query: 10 KNKAISRTSSVGCSSRSIYYYGTAQGVPFKWETQPGTPKDPPPQEILPPLSPPPAVLSLG 69
          +  +ISR SSVG      Y     +GVPF+WE QPGTP +  P+E++PPLSPPPA+LSLG
Sbjct: 8  EGSSISRNSSVG-----YYDERMPEGVPFEWEMQPGTPINTQPREVVPPLSPPPAMLSLG 67

Query: 70 VSKP--CIEQPKTRP-RLRMRLRFWR 93
          + KP   IE+PK      +++LR W+
Sbjct: 68 LPKPSISIEEPKNFVFPTKLKLRNWK 88

[Close]

BLAST of Tan0008169 vs. TAIR 10
Match: AT4G25850.2 (OSBP(oxysterol binding protein)-related protein 4B )

HSP 1 Score: 71.6 bits (174), Expect = 7.6e-13
Identity = 42/86 (48.84%), Postives = 57/86 (66.28%), Query Frame = 0


Query: 10 KNKAISRTSSVGCSSRSIYYYGTAQGVPFKWETQPGTPKDPPPQEILPPLSPPPAVLSLG 69
          +  +ISR SSVG      Y     +GVPF+WE QPGTP +  P+E++PPLSPPPA+LSLG
Sbjct: 8  EGSSISRNSSVG-----YYDERMPEGVPFEWEMQPGTPINTQPREVVPPLSPPPAMLSLG 67

Query: 70 VSKP--CIEQPKTRP-RLRMRLRFWR 93
          + KP   IE+PK      +++LR W+
Sbjct: 68 LPKPSISIEEPKNFVFPTKLKLRNWK 88

[Close]

BLAST of Tan0008169 vs. TAIR 10
Match: AT2G40475.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56260.2); Has 477 Blast hits to 219 proteins in 41 species: Archae - 0; Bacteria - 4; Metazoa - 91; Fungi - 61; Plants - 144; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). )

HSP 1 Score: 50.8 bits (120), Expect = 1.4e-06
Identity = 32/61 (52.46%), Postives = 38/61 (62.30%), Query Frame = 0


Query: 9  VKNKAISRTSSVGCSSRSIYYYGTAQGVPFKWETQPGTPKDPPPQEI--LPPLSPPPAVL 68
          + +K I + SS   SS  IYYYG A  VPF WET+PGTPK     E   LPPL+PPP+  
Sbjct: 13 ISSKIIVKESSQVNSSSRIYYYGGA-SVPFLWETRPGTPKHALFSESLRLPPLTPPPSYY 72

[Close]

BLAST of Tan0008169 vs. TAIR 10
Match: AT5G01790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.8 bits (112), Expect = 1.2e-05
Identity = 45/142 (31.69%), Postives = 64/142 (45.07%), Query Frame = 0


Query: 19  SVGCSSRSIYYY-GTAQGVPFKWETQPGTPKDPPPQ-EILPPLSPPPAVLSLGVSKPCIE 78
           S  C S  IYYY G A  VPF+WE+ PGTPK P  +   LPPL+PPP+  S    +    
Sbjct: 57  SAACPSFRIYYYDGAAGAVPFEWESHPGTPKHPSSELPTLPPLTPPPSHFSFSGDQIRRR 116

Query: 79  QPKTRPRLRMRL---RFWRGGKKSRDSER--------ASQATTIDYNKEDPFGHNDKLET 138
             K+  ++   +    FW  G  +  +++         S+   ID N+ D F    +   
Sbjct: 117 SKKSTKKILALIPTRLFWLSGDHNGKAKKLSASSPPSLSERVLIDENEYDLFKFQTERNV 176

Query: 139 F-SFFSYDCEFMASPQGSMSSS 147
              F S+D       Q S S+S
Sbjct: 177 MRRFSSFDSSADYPIQRSQSTS 198

The following BLAST results are available for this feature:

BLAST of Tan0008169 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0008169 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022997465.1	2.0e-68	73.44	uncharacterized protein LOC111492375 [Cucurbita maxima]	[more]
KAG7029810.1	1.1e-66	72.68	hypothetical protein SDJN02_08153, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022929606.1	1.5e-66	72.40	uncharacterized protein LOC111436141 [Cucurbita moschata]	[more]
XP_022153305.1	9.5e-66	72.40	uncharacterized protein LOC111020830 [Momordica charantia]	[more]
XP_023546389.1	9.5e-66	71.35	uncharacterized protein LOC111805512 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Tan0008169 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K9Q8	9.9e-69	73.44	uncharacterized protein LOC111492375 OS=Cucurbita maxima OX=3661 GN=LOC111492375...	[more]
A0A6J1ENL5	7.1e-67	72.40	uncharacterized protein LOC111436141 OS=Cucurbita moschata OX=3662 GN=LOC1114361...	[more]
A0A6J1DGF8	4.6e-66	72.40	uncharacterized protein LOC111020830 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A5D3BQA0	2.0e-61	69.54	Putative OSBP(Oxysterol binding protein)-related protein 4B OS=Cucumis melo var....	[more]
A0A5A7UK88	7.6e-61	69.04	Putative OSBP(Oxysterol binding protein)-related protein 4B OS=Cucumis melo var....	[more]

BLAST of Tan0008169 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25845.1	7.6e-13	48.84	BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-rela...	[more]
AT4G25850.2	7.6e-13	48.84	OSBP(oxysterol binding protein)-related protein 4B	[more]
AT2G40475.1	1.4e-06	52.46	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G01790.1	1.2e-05	31.69	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..61
None	No IPR available	PANTHER	PTHR33257	OS05G0165500 PROTEIN	coord: 10..169
None	No IPR available	PANTHER	PTHR33257:SF6	OXYSTEROL-BINDING 4B-LIKE PROTEIN-RELATED	coord: 10..169

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0008169.1	Tan0008169.1	mRNA