Tan0008150 (gene) Snake gourd v1

Overview
NameTan0008150
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUPF0057 membrane protein
LocationLG09: 67576401 .. 67576738 (+)
RNA-Seq ExpressionTan0008150
SyntenyTan0008150
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCATCTCGCTGCGAAATCTTCTGCGAGATTCTCATCGCCATCTTGATTCCTCCTTTGGGCGTCTGCCTCAGGCACGGCTGTTGTACTGTACGTTTCTGATTCTTTTCCTCTTTTGTGCTGATTTTGCCTTTACTCTCATTAATTTATCATTAATCGAATGGATTCTGATTTTCCGATTGCTTTTTTTTTTTTTGCAGGTTGAGTTTTGCATATGCCTTCTTTTGACGATTCTCGGTTATGTTCCTGGAATTATCTACGCTTTGTATGCCATCGTTTTCATTGATCGCGATGAGTACTTCGATGAATACAGGCGTCCTCTTTATGCGCCGGCCTAG

mRNA sequence

ATGCCATCTCGCTGCGAAATCTTCTGCGAGATTCTCATCGCCATCTTGATTCCTCCTTTGGGCGTCTGCCTCAGGCACGGCTGTTGTACTGTTGAGTTTTGCATATGCCTTCTTTTGACGATTCTCGGTTATGTTCCTGGAATTATCTACGCTTTGTATGCCATCGTTTTCATTGATCGCGATGAGTACTTCGATGAATACAGGCGTCCTCTTTATGCGCCGGCCTAG

Coding sequence (CDS)

ATGCCATCTCGCTGCGAAATCTTCTGCGAGATTCTCATCGCCATCTTGATTCCTCCTTTGGGCGTCTGCCTCAGGCACGGCTGTTGTACTGTTGAGTTTTGCATATGCCTTCTTTTGACGATTCTCGGTTATGTTCCTGGAATTATCTACGCTTTGTATGCCATCGTTTTCATTGATCGCGATGAGTACTTCGATGAATACAGGCGTCCTCTTTATGCGCCGGCCTAG

Protein sequence

MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDRDEYFDEYRRPLYAPA
Homology
BLAST of Tan0008150 vs. ExPASy Swiss-Prot
Match: Q9SUI0 (UPF0057 membrane protein At4g30660 OS=Arabidopsis thaliana OX=3702 GN=At4g30660 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.9e-28
Identity = 58/73 (79.45%), Postives = 65/73 (89.04%), Query Frame = 0

Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60
          MPS CEI CEI+IAIL+PPLGVC R GCCTVEF ICL+LTILGYVPGIIYA+Y IVF  R
Sbjct: 1  MPSNCEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHR 60

Query: 61 DEYFDEYRRPLYA 74
          +EYFDEYRRP+Y+
Sbjct: 61 EEYFDEYRRPIYS 73

BLAST of Tan0008150 vs. ExPASy Swiss-Prot
Match: O82232 (UPF0057 membrane protein At2g24040 OS=Arabidopsis thaliana OX=3702 GN=At2g24040 PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 9.3e-28
Identity = 56/72 (77.78%), Postives = 64/72 (88.89%), Query Frame = 0

Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60
          M S CE+ CEI IAIL+PP+GVCLRHGCCTVEF ICL+LT LGY+PGIIYA+YAI F+ R
Sbjct: 1  MASSCELCCEIFIAILLPPVGVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAICFLHR 60

Query: 61 DEYFDEYRRPLY 73
          DEYFDEYRRP+Y
Sbjct: 61 DEYFDEYRRPIY 72

BLAST of Tan0008150 vs. ExPASy Swiss-Prot
Match: Q9M095 (UPF0057 membrane protein At4g30650 OS=Arabidopsis thaliana OX=3702 GN=At4g30650 PE=3 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.9e-20
Identity = 47/61 (77.05%), Postives = 54/61 (88.52%), Query Frame = 0

Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60
          M S  E+FCEILIAIL+PPLGVCL+ GCCTVEF ICL+LTILGY+PGIIYALY IVF +R
Sbjct: 1  MASNMEVFCEILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVIVFQNR 60

Query: 61 D 62
          +
Sbjct: 61 E 61

BLAST of Tan0008150 vs. ExPASy Swiss-Prot
Match: Q9LRI7 (Hydrophobic protein OSR8 OS=Oryza sativa subsp. japonica OX=39947 GN=OSR8 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 6.0e-19
Identity = 45/64 (70.31%), Postives = 54/64 (84.38%), Query Frame = 0

Query: 4  RCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDRDEY 63
          RC  F EIL+AI++PPLGV LR GCC++EFCICLLLTILGYVPGIIYA+Y +V +D D+Y
Sbjct: 5  RCCTFLEILLAIILPPLGVFLRFGCCSMEFCICLLLTILGYVPGIIYAVYVLVALDSDQY 64

Query: 64 FDEY 68
            EY
Sbjct: 65 QREY 68

BLAST of Tan0008150 vs. ExPASy Swiss-Prot
Match: Q9ZNQ7 (Hydrophobic protein RCI2A OS=Arabidopsis thaliana OX=3702 GN=RCI2A PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 3.9e-10
Identity = 33/48 (68.75%), Postives = 41/48 (85.42%), Query Frame = 0

Query: 8  FCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAI 56
          F +I+IAIL+PPLGV LR G C VEF ICL+LT+LGY+PGIIYA+Y +
Sbjct: 6  FVDIIIAILLPPLGVFLRFG-CGVEFWICLVLTLLGYIPGIIYAIYVL 52

BLAST of Tan0008150 vs. NCBI nr
Match: XP_038879686.1 (UPF0057 membrane protein At4g30660-like [Benincasa hispida])

HSP 1 Score: 157.5 bits (397), Expect = 4.4e-35
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0

Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60
          MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60

Query: 61 DEYFDEYRRPLYAPA 76
          DEYFDEYRRPLYAPA
Sbjct: 61 DEYFDEYRRPLYAPA 75

BLAST of Tan0008150 vs. NCBI nr
Match: XP_008443846.1 (PREDICTED: UPF0057 membrane protein At4g30660 [Cucumis melo])

HSP 1 Score: 156.0 bits (393), Expect = 1.3e-34
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 0

Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60
          MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLT LGYVPGIIYALYAIVFIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60

Query: 61 DEYFDEYRRPLYAPA 76
          DEYFDEYRRPLYAPA
Sbjct: 61 DEYFDEYRRPLYAPA 75

BLAST of Tan0008150 vs. NCBI nr
Match: XP_004146673.1 (UPF0057 membrane protein At4g30660 [Cucumis sativus] >KGN65173.1 hypothetical protein Csa_019763 [Cucumis sativus])

HSP 1 Score: 154.1 bits (388), Expect = 4.9e-34
Identity = 73/75 (97.33%), Postives = 74/75 (98.67%), Query Frame = 0

Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60
          MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLT LGYVPGIIYALYAIVFIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60

Query: 61 DEYFDEYRRPLYAPA 76
          +EYFDEYRRPLYAPA
Sbjct: 61 NEYFDEYRRPLYAPA 75

BLAST of Tan0008150 vs. NCBI nr
Match: XP_018828305.1 (UPF0057 membrane protein At4g30660-like [Juglans regia] >XP_018828306.1 UPF0057 membrane protein At4g30660-like [Juglans regia] >XP_040997633.1 UPF0057 membrane protein At4g30660-like [Juglans microcarpa x Juglans regia] >XP_040997634.1 UPF0057 membrane protein At4g30660-like [Juglans microcarpa x Juglans regia])

HSP 1 Score: 151.8 bits (382), Expect = 2.4e-33
Identity = 69/75 (92.00%), Postives = 74/75 (98.67%), Query Frame = 0

Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60
          MPSRCEIFCEILIAIL+PPLGVC RHGCC+VEFCICLLLTILGY+PGIIYALYAIVF+DR
Sbjct: 1  MPSRCEIFCEILIAILLPPLGVCFRHGCCSVEFCICLLLTILGYIPGIIYALYAIVFVDR 60

Query: 61 DEYFDEYRRPLYAPA 76
          D+YFDEYRRPLYAPA
Sbjct: 61 DQYFDEYRRPLYAPA 75

BLAST of Tan0008150 vs. NCBI nr
Match: XP_008243011.1 (PREDICTED: UPF0057 membrane protein At4g30660-like [Prunus mume] >XP_008243012.1 PREDICTED: UPF0057 membrane protein At4g30660-like [Prunus mume] >CAB4288873.1 unnamed protein product [Prunus armeniaca] >CAB4319235.1 unnamed protein product [Prunus armeniaca])

HSP 1 Score: 151.0 bits (380), Expect = 4.1e-33
Identity = 69/73 (94.52%), Postives = 73/73 (100.00%), Query Frame = 0

Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60
          MPSRCEIFCEILIA+LIPPLGVCLRHGCCT+EFCICLLLT+LGYVPGIIYALYAIVF+DR
Sbjct: 1  MPSRCEIFCEILIAVLIPPLGVCLRHGCCTIEFCICLLLTLLGYVPGIIYALYAIVFVDR 60

Query: 61 DEYFDEYRRPLYA 74
          DEYFDEYRRPLYA
Sbjct: 61 DEYFDEYRRPLYA 73

BLAST of Tan0008150 vs. ExPASy TrEMBL
Match: A0A1S3B9R0 (UPF0057 membrane protein At4g30660 OS=Cucumis melo OX=3656 GN=LOC103487341 PE=3 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 6.2e-35
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 0

Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60
          MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLT LGYVPGIIYALYAIVFIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60

Query: 61 DEYFDEYRRPLYAPA 76
          DEYFDEYRRPLYAPA
Sbjct: 61 DEYFDEYRRPLYAPA 75

BLAST of Tan0008150 vs. ExPASy TrEMBL
Match: A0A0A0LTR2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G257300 PE=3 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.4e-34
Identity = 73/75 (97.33%), Postives = 74/75 (98.67%), Query Frame = 0

Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60
          MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLT LGYVPGIIYALYAIVFIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60

Query: 61 DEYFDEYRRPLYAPA 76
          +EYFDEYRRPLYAPA
Sbjct: 61 NEYFDEYRRPLYAPA 75

BLAST of Tan0008150 vs. ExPASy TrEMBL
Match: A0A2I4F9J0 (UPF0057 membrane protein At4g30660-like OS=Juglans regia OX=51240 GN=LOC108996740 PE=3 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.2e-33
Identity = 69/75 (92.00%), Postives = 74/75 (98.67%), Query Frame = 0

Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60
          MPSRCEIFCEILIAIL+PPLGVC RHGCC+VEFCICLLLTILGY+PGIIYALYAIVF+DR
Sbjct: 1  MPSRCEIFCEILIAILLPPLGVCFRHGCCSVEFCICLLLTILGYIPGIIYALYAIVFVDR 60

Query: 61 DEYFDEYRRPLYAPA 76
          D+YFDEYRRPLYAPA
Sbjct: 61 DQYFDEYRRPLYAPA 75

BLAST of Tan0008150 vs. ExPASy TrEMBL
Match: A0A6J5VL24 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS47110 PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.0e-33
Identity = 69/73 (94.52%), Postives = 73/73 (100.00%), Query Frame = 0

Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60
          MPSRCEIFCEILIA+LIPPLGVCLRHGCCT+EFCICLLLT+LGYVPGIIYALYAIVF+DR
Sbjct: 1  MPSRCEIFCEILIAVLIPPLGVCLRHGCCTIEFCICLLLTLLGYVPGIIYALYAIVFVDR 60

Query: 61 DEYFDEYRRPLYA 74
          DEYFDEYRRPLYA
Sbjct: 61 DEYFDEYRRPLYA 73

BLAST of Tan0008150 vs. ExPASy TrEMBL
Match: A0A6P5SJT5 (UPF0057 membrane protein At4g30660-like OS=Prunus avium OX=42229 GN=LOC110756847 PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.6e-33
Identity = 68/73 (93.15%), Postives = 73/73 (100.00%), Query Frame = 0

Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60
          MPSRCEIFCEILIA+LIPPLGVCLRHGCCT+EFCICLLLT+LGY+PGIIYALYAIVF+DR
Sbjct: 1  MPSRCEIFCEILIAVLIPPLGVCLRHGCCTIEFCICLLLTLLGYIPGIIYALYAIVFVDR 60

Query: 61 DEYFDEYRRPLYA 74
          DEYFDEYRRPLYA
Sbjct: 61 DEYFDEYRRPLYA 73

BLAST of Tan0008150 vs. TAIR 10
Match: AT4G28088.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 127.9 bits (320), Expect = 3.5e-30
Identity = 58/72 (80.56%), Postives = 67/72 (93.06%), Query Frame = 0

Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60
          M + CEI CEI+IAILIPPLGVCLRHGCCT EF ICL+LT+LGYVPGIIYALYAIV++DR
Sbjct: 1  MANGCEICCEIMIAILIPPLGVCLRHGCCTTEFMICLILTLLGYVPGIIYALYAIVYVDR 60

Query: 61 DEYFDEYRRPLY 73
          D++FDEYRRPL+
Sbjct: 61 DQFFDEYRRPLF 72

BLAST of Tan0008150 vs. TAIR 10
Match: AT4G30660.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 125.9 bits (315), Expect = 1.3e-29
Identity = 58/73 (79.45%), Postives = 65/73 (89.04%), Query Frame = 0

Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60
          MPS CEI CEI+IAIL+PPLGVC R GCCTVEF ICL+LTILGYVPGIIYA+Y IVF  R
Sbjct: 1  MPSNCEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHR 60

Query: 61 DEYFDEYRRPLYA 74
          +EYFDEYRRP+Y+
Sbjct: 61 EEYFDEYRRPIYS 73

BLAST of Tan0008150 vs. TAIR 10
Match: AT4G30660.2 (Low temperature and salt responsive protein family )

HSP 1 Score: 125.9 bits (315), Expect = 1.3e-29
Identity = 58/73 (79.45%), Postives = 65/73 (89.04%), Query Frame = 0

Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60
          MPS CEI CEI+IAIL+PPLGVC R GCCTVEF ICL+LTILGYVPGIIYA+Y IVF  R
Sbjct: 1  MPSNCEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHR 60

Query: 61 DEYFDEYRRPLYA 74
          +EYFDEYRRP+Y+
Sbjct: 61 EEYFDEYRRPIYS 73

BLAST of Tan0008150 vs. TAIR 10
Match: AT2G24040.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 123.6 bits (309), Expect = 6.6e-29
Identity = 56/72 (77.78%), Postives = 64/72 (88.89%), Query Frame = 0

Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60
          M S CE+ CEI IAIL+PP+GVCLRHGCCTVEF ICL+LT LGY+PGIIYA+YAI F+ R
Sbjct: 1  MASSCELCCEIFIAILLPPVGVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAICFLHR 60

Query: 61 DEYFDEYRRPLY 73
          DEYFDEYRRP+Y
Sbjct: 61 DEYFDEYRRPIY 72

BLAST of Tan0008150 vs. TAIR 10
Match: AT4G30650.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 99.4 bits (246), Expect = 1.3e-21
Identity = 47/61 (77.05%), Postives = 54/61 (88.52%), Query Frame = 0

Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60
          M S  E+FCEILIAIL+PPLGVCL+ GCCTVEF ICL+LTILGY+PGIIYALY IVF +R
Sbjct: 1  MASNMEVFCEILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVIVFQNR 60

Query: 61 D 62
          +
Sbjct: 61 E 61

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9SUI01.9e-2879.45UPF0057 membrane protein At4g30660 OS=Arabidopsis thaliana OX=3702 GN=At4g30660 ... [more]
O822329.3e-2877.78UPF0057 membrane protein At2g24040 OS=Arabidopsis thaliana OX=3702 GN=At2g24040 ... [more]
Q9M0951.9e-2077.05UPF0057 membrane protein At4g30650 OS=Arabidopsis thaliana OX=3702 GN=At4g30650 ... [more]
Q9LRI76.0e-1970.31Hydrophobic protein OSR8 OS=Oryza sativa subsp. japonica OX=39947 GN=OSR8 PE=3 S... [more]
Q9ZNQ73.9e-1068.75Hydrophobic protein RCI2A OS=Arabidopsis thaliana OX=3702 GN=RCI2A PE=2 SV=1[more]
Match NameE-valueIdentityDescription
XP_038879686.14.4e-35100.00UPF0057 membrane protein At4g30660-like [Benincasa hispida][more]
XP_008443846.11.3e-3498.67PREDICTED: UPF0057 membrane protein At4g30660 [Cucumis melo][more]
XP_004146673.14.9e-3497.33UPF0057 membrane protein At4g30660 [Cucumis sativus] >KGN65173.1 hypothetical pr... [more]
XP_018828305.12.4e-3392.00UPF0057 membrane protein At4g30660-like [Juglans regia] >XP_018828306.1 UPF0057 ... [more]
XP_008243011.14.1e-3394.52PREDICTED: UPF0057 membrane protein At4g30660-like [Prunus mume] >XP_008243012.1... [more]
Match NameE-valueIdentityDescription
A0A1S3B9R06.2e-3598.67UPF0057 membrane protein At4g30660 OS=Cucumis melo OX=3656 GN=LOC103487341 PE=3 ... [more]
A0A0A0LTR22.4e-3497.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G257300 PE=3 SV=1[more]
A0A2I4F9J01.2e-3392.00UPF0057 membrane protein At4g30660-like OS=Juglans regia OX=51240 GN=LOC10899674... [more]
A0A6J5VL242.0e-3394.52Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS47110 PE=3 S... [more]
A0A6P5SJT52.6e-3393.15UPF0057 membrane protein At4g30660-like OS=Prunus avium OX=42229 GN=LOC110756847... [more]
Match NameE-valueIdentityDescription
AT4G28088.13.5e-3080.56Low temperature and salt responsive protein family [more]
AT4G30660.11.3e-2979.45Low temperature and salt responsive protein family [more]
AT4G30660.21.3e-2979.45Low temperature and salt responsive protein family [more]
AT2G24040.16.6e-2977.78Low temperature and salt responsive protein family [more]
AT4G30650.11.3e-2177.05Low temperature and salt responsive protein family [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000612Proteolipid membrane potential modulatorPFAMPF01679Pmp3coord: 9..56
e-value: 6.4E-17
score: 61.5
IPR000612Proteolipid membrane potential modulatorPANTHERPTHR21659HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATEDcoord: 1..73
IPR000612Proteolipid membrane potential modulatorPROSITEPS01309UPF0057coord: 12..27
NoneNo IPR availablePANTHERPTHR21659:SF93BNAA03G50460D PROTEINcoord: 1..73

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0008150.1Tan0008150.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane