Tan0008111 (gene) Snake gourd v1

Overview


Name	Tan0008111
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Retrotran_gag_3 domain-containing protein
Location	LG04: 55590749 .. 55594988 (+)
RNA-Seq Expression	Tan0008111
Synteny	Tan0008111

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTAAAAAAAAAAAGGGAAATTTTTCGTTAAACCTCTCGTTCTCTTTCTCAAACACCCAGGAGCTTCTTTCTTTCGTGTAGAACCATCTTCTTCTTCTCATTCGCCCATCTTCTTCTCCTTCCTTCGCCCATCTTCTTCTTCTCATGCCAACATCGACAGCGACACTGCACATTTCTTACAATAGTCGACCAACAAGTGCATATCATCTGTTTGTTTCGCAGTTCACACGTCTTCTTCAACCTCACGCCAATGTTTCTTGCAACGATGTGGGGGGTGACGTGCGAAGGATCCCTTGCGCTGACCTGTAGCAGCAACGGGTTCAACCTTTGTGCTGGCTGTCAACGTCGTCTCCTGTTCCAGGTGCATAAATGATAAATCCACACAATTTGGAGTCTCGAATAATTTCAATTCAGTGACTCACACTAAGGTTAGTCTTAAATTTGATAGGTGTGTTACTGAACCTTGTTAACTTTTGGAGATTTGACATTTCAGATCAATTTTAGAAACCTGAACTCCTACAAAATTAGGTCATCCATTTCGTTTTTTTGTAGAATAGATTAATTGATTATATCTGATCGTAGGTTTCTTTTGGTCCTAGATCGAATTAAGACATTTCATTTGACTAAATGATAGATTGAATATGTTTGAGAAAACTTCAGAAAATTCATTGAAACGTAGTAAAACAGAGTTTTAATTTTTTTTATTTATCTTTGTTGTTTTTTATTCCTTTTTTGCATTCAAAGTGTGATGTTGTTTATGTTCTGCTTTTTTTTTCTTATGTTTAGTTCTGAACTGTTATATTTAGATTGTTTATTCTTTTACCTTTTGTATTTGTATTTAGTTGTTGAATCTAGTTGCATAGGTGAAATAGAGAGTTGTTATGGTTGTTGGACTGTTTAGGAGCACAAGGTGTAATTTAGGTGCAAGTATTGATTATGTGGTTTAGGTACAACTGCACAAGTATGTAATAGATTGGTTGAAAGCTTTGGTTGAAAGCTTACCATTTAAAAGGTAATGACTGAGTACATCTATGAATTTGGCAGATTGATATGAGTACCTTTTTCTTCTTCTTCAATAGATAACTCTCATGGTTGTTAAGCTCATCAAATTAAGTTGGAGAGAATGTATGAGATAGTTTTTGGTTGGTCTTTGTTGTTTCTTTGATTGTTTTTGTTGGTTATTCTCTTTATTTATTAATAAGGAAATATTGGCTATTCCCTTATTTGTCAATAAATATTTCATTGTATTTGCCATATTGTAGATGCTGGAATTTTATTTCCTTGTATGTAAATATAGGTTTCTTCTATATAAGAAATCTTGTACCTTCATTGTGAAATATAGAAAATATTTCTACTCTCATTATTTTCTACATGGTATCAGAGCAGAAACCCTAAATCTGTTCAAAGAAAAACCCTAATTCCCTTTTTGTTCAAAACCCTAAATCGGCTGCAACACCCATTACCAGTCTCTCACGACCAGCAAACTCACGACATCTTCAACCTTCCTTTCGTTTTCTGGAAAGGAACCCATAAACTTCCTTTCGTTTTCTGGAAAGAACCCACGAGCAACAAACCCACAAAAATACCCACGAACCTGAGAAGACCCAGACCCGACCCGCGAAGCATACCCACGAATCCAGCGGCTTTGTCTGCGACTCTTAACCCGCGAAGCATACCCACGAATCCGCGAAGCATACCCGCGAACTAACCAGGTTGGTCGGCTTTGTCTGCCGTCGGACCCGTAAACTAACCCAGCGGATTTTTCTTGACCCACTACCGTTGGTCTCCGCCGCGAACTAACCGGAGTTTGTCGGTCTCCGCCGCTGGACTCATACGTTTGTTGTTTCTCTACATCTTTACTTATAGTTTTCTTTTTTATCAAAGGGAGTTTCTGTTTTTTGCTTTGTTTGTTGTTACTGTGTGGTGTTCTCCAACAGAATGTCAAACAATAAGTTGTTGCCCATTGTAAAAACCTCAGATAGTCGGATCCACTCCAACAGTCTTGTTGTCCAAATTACAACCATTCGACTTAATGGCGATAACTTCCTTCGTTGGTCGCAAAGTGTTCGAATGTACATCCGAGGACAAGGGAAGATTGGATACCTTACTGGAGAGAAATCCATGCCTGCAGAAGACGATCCTTCGTTCACTGTATGGGATGCTGAAAACTCCATGGTGATGACCTGGTTAGTAAATTCCATGGTAGAAGAAATAAGTTCTAACTATATGTGCTACTCTACTGCTAAGGAATTGTGGGAGAATGTGACTCAGATGTATTCTGACCTGGGAAATCAATCACAAGTGTTTGAACTCAATCTTAAAGCTGGGTGATATACGACGGAAATAATTACTCACACACAAGACTTTCATTTGTTAAAACGAATTTGGCAGGACTTGGATTTATTTGATACGTATGAGTGGAAGTCAACTGATGATCAAAGGCACTACAGGAAAGTTGTGGAAGACGGGCGGATTTATAAATTCCTCGCAGGGCTCAACGTTGAATTCGATGAGGTTAGAGGACGAATACTGGGAAAAACTGTACTCCCAAATATTAATGATGTGTTTTCTGAAGTTCGCAGGGAAGAGAGTCGTAGAAGTGATATGATCGACAAGAAAGTCATTGATTCAGTTGAAAGTTCGGCTCTAGTAGTTAAAGCTACAACACATAAGGCATCAAATCAGGCACCCAAAAATAATGAAAAGCCTCGAGTCTGGTGTGATTACTGCAACAAGCCTCGACATACTCGTGAAACATGCTGGAAACTTCACGGAAACTCCATTAATCGGAAGAGTAATAAGCATGGCCCCACTTCATCTGATGACAGGAGTGTAAATCAACACTCATCTGGTAATCAATCATCATTCTCTGCTAATATTGCTGATTCTAATCCATTTAGCAAGGAGCAAGTCGATCAACTCCTGAAGCTGTTAAAGGTCAATTCATCATCGGGTAATCCCAGTGTTTCCTTGGCACAAACAGGTACTTGTCCTCAAGCCCTTTCTTGTCTTAACTCCTCCCCATGGATCATAGATTCCGGGGCTTCTGATCACATGACCAGTTCCTCAAAATTATTTGAATCATACTCTCCGATGTACTGTAATGAAAAAATTTGAATTGCAGACGGTAGTTTTAATTCCATTGCAGGAAAAGGAACTATTAGACTATCCTAAAAAATTAATCTATATTCTGTATTGCATGTTGCAAAACTAGAATGTAATTTGTTATCTGTCAGTAAAATATCTAAGGATGCTAATTGTCGTGTCACCTTCTGTGATTCCCATTGTGTTTTTCCGGATCAGGGATCGGGGGAGATGATTGGGCGTGCTAGAATGCTTGAAGGTCTCTACTATTTTGAGGAACCCTCGACTAGTCATAAAACAGTTCGAGGCTTGAGTAGTGTTAGTTCTTCCCCTGTTAAAGAAACTATAATGCTTTGGCATCGTAGATTAGAGCATCCCAGTTTTTTCTATTTAAAGTATTTGTTTCCATATTTAAAGGTATTGATTGCTCCATTTTTCAGTGTGAAAGCTGTATTTTTGCAAAAAATCACAGATCAACTTATTCACCCAACTCTTACAAAGCATCTACTCCTTTTTACCTAATTCATAGTGATGTTTGGGGACCTTCAAAAGTTTTAACTCATAGTGAAAAACGGTGGTTTGTTAATTTTATTGATGACCATACTAGGTTAACCTGGATTTATTTGCTTAAAAACAAGTCAGATGTGAAAGATATTTTTATCCAGTTTTATAACATGATTGAAACTCATTCCAAACTAAAATTAGCATTTTGCATTCTGATAATGGAAAAGAGTATTTCAATGAATATTTAAATGAATTCTTTAAAGTCAAAGGTATTTTTCACCAATCGACGTGTCGTGACACTCCCCAACAAAATGGCATTGCTGAAAGGAAAAATAGACACTTACTTGATGTTGCTCGTGCACTTATGTTTTCTATGCATGTTCCTAATTATTTGTGGGGAGAAGCTATTCTTACGGCAGCGTATCTTATTAATCGAATGCCTTCAAAAAATTTGGATTTTAAGACACCCCTAGATCATTTTAAAACTTTTTTTTCCCTCCGTTCGCTTATTTTCTGATTTGCCTATCAAGGTTTTTGGGTGTACAACATATGTTCACCTTCCTAACATTTGTCGGTCTAAACTTGAGCCTAGGGCTTCTAAATGTATTTTAAGTGGATATGTTTCAAACAAGAAAGCATATAAATGTTTTTA

mRNA sequence

GCTAAAAAAAAAAAGGGAAATTTTTCGTTAAACCTCTCGTTCTCTTTCTCAAACACCCAGGAGCTTCTTTCTTTCGTGTAGAACCATCTTCTTCTTCTCATTCGCCCATCTTCTTCTCCTTCCTTCGCCCATCTTCTTCTTCTCATGCCAACATCGACAGCGACACTGCACATTTCTTACAATAGTCGACCAACAAGTGCATATCATCTGTTTGTTTCGCAGTTCACACGTCTTCTTCAACCTCACGCCAATGTTTCTTGCAACGATGTGGGGGGTGACGTGCGAAGGATCCCTTGCGCTGACCTGTAGCAGCAACGGGTTCAACCTTTGTGCTGGCTGTCAACGTCGTCTCCTGTTCCAGGTGCATAAATGATAAATCCACACAATTTGGAGTCTCGAATAATTTCAATTCAGTGACTCACACTAAGGTTAGTCTTAAATTTGATAGGTGTGTTACTGAACCTTGTTAACTTTTGGAGATTTGACATTTCAGATCAATTTTAGAAACCTGAACTCCTACAAAATTAGGTCATCCATTTCGTTTTTTTGTAGAATAGATTAATTGATTATATCTGATCGTAGGTTTCTTTTGGTCCTAGATCGAATTAAGACATTTCATTTGACTAAATGATAGATTGAATATGTTTGAGAAAACTTCAGAAAATTCATTGAAACGTAGTAAAACAGAGTTTTAATTTTTTTTATTTATCTTTGTTGTTTTTTATTCCTTTTTTGCATTCAAAGTGTGATGTTGTTTATGTTCTGCTTTTTTTTTCTTATGTTTAGTTCTGAACTGTTATATTTAGATTGTTTATTCTTTTACCTTTTGTATTTGTATTTAGTTGTTGAATCTAGTTGCATAGGTGAAATAGAGAGTTGTTATGGTTGTTGGACTGTTTAGGAGCACAAGGTGTAATTTAGGTGCAAGTATTGATTATGTGGTTTAGGTACAACTGCACAAGTATGTAATAGATTGGTTGAAAGCTTTGGTTGAAAGCTTACCATTTAAAAGGTAATGACTGAGTACATCTATGAATTTGGCAGATTGATATGAGTACCTTTTTCTTCTTCTTCAATAGATAACTCTCATGGTTGTTAAGCTCATCAAATTAAGTTGGAGAGAATGTATGAGATAGTTTTTGGTTGGTCTTTGTTGTTTCTTTGATTGTTTTTGTTGGTTATTCTCTTTATTTATTAATAAGGAAATATTGGCTATTCCCTTATTTGTCAATAAATATTTCATTGTATTTGCCATATTGTAGATGCTGGAATTTTATTTCCTTGTATGTAAATATAGGTTTCTTCTATATAAGAAATCTTGTACCTTCATTGTGAAATATAGAAAATATTTCTACTCTCATTATTTTCTACATGGTATCAGAGCAGAAACCCTAAATCTGTTCAAAGAAAAACCCTAATTCCCTTTTTGTTCAAAACCCTAAATCGGCTGCAACACCCATTACCAGTCTCTCACGACCAGCAAACTCACGACATCTTCAACCTTCCTTTCGTTTTCTGGAAAGGAACCCATAAACTTCCTTTCGTTTTCTGGAAAGAACCCACGAGCAACAAACCCACAAAAATACCCACGAACCTGAGAAGACCCAGACCCGACCCGCGAAGCATACCCACGAATCCAGCGGCTTTGTCTGCGACTCTTAACCCGCGAAGCATACCCACGAATCCGCGAAGCATACCCGCGAACTAACCAGGTTGGTCGGCTTTGTCTGCCGTCGGACCCGTAAACTAACCCAGCGGATTTTTCTTGACCCACTACCGTTGGTCTCCGCCGCGAACTAACCGGAGTTTGTCGGTCTCCGCCGCTGGACTCATACGTTTGTTGTTTCTCTACATCTTTACTTATAGTTTTCTTTTTTATCAAAGGGAGTTTCTGTTTTTTGCTTTGTTTGTTGTTACTGTGTGGTGTTCTCCAACAGAATGTCAAACAATAAGTTGTTGCCCATTGTAAAAACCTCAGATAGTCGGATCCACTCCAACAGTCTTGTTGTCCAAATTACAACCATTCGACTTAATGGCGATAACTTCCTTCGTTGGTCGCAAAGTGTTCGAATGTACATCCGAGGACAAGGGAAGATTGGATACCTTACTGGAGAGAAATCCATGCCTGCAGAAGACGATCCTTCGTTCACTGTATGGGATGCTGAAAACTCCATGGTGATGACCTGGTTAGTAAATTCCATGGTAGAAGAAATAAGTTCTAACTATATGTGCTACTCTACTGCTAAGGAATTGTGGGAGAATGTGACTCAGATGTATTCTGACCTGGGAAATCAATCACAAGTGTTTGAACTCAATCTTAAAGCTGGGTGATATACGACGGAAATAATTACTCACACACAAGACTTTCATTTGTTAAAACGAATTTGGCAGGACTTGGATTTATTTGATACGTATGAGTGGAAGTCAACTGATGATCAAAGGCACTACAGGAAAGTTGTGGAAGACGGGCGGATTTATAAATTCCTCGCAGGGCTCAACGTTGAATTCGATGAGGTTAGAGGACGAATACTGGGAAAAACTGTACTCCCAAATATTAATGATGTGTTTTCTGAAGTTCGCAGGGAAGAGAGTCGTAGAAGTGATATGATCGACAAGAAAGTCATTGATTCAGTTGAAAGTTCGGCTCTAGTAGTTAAAGCTACAACACATAAGGCATCAAATCAGGCACCCAAAAATAATGAAAAGCCTCGAGTCTGGTGTGATTACTGCAACAAGCCTCGACATACTCGTGAAACATGCTGGAAACTTCACGGAAACTCCATTAATCGGAAGAGTAATAAGCATGGCCCCACTTCATCTGATGACAGGAGTGTAAATCAACACTCATCTGGTAATCAATCATCATTCTCTGCTAATATTGCTGATTCTAATCCATTTAGCAAGGAGCAAGTCGATCAACTCCTGAAGCTGTTAAAGGTCAATTCATCATCGGGTAATCCCAGTGTTTCCTTGGCACAAACAGGTACTTGTCCTCAAGCCCTTTCTTGTCTTAACTCCTCCCCATGGATCATAGATTCCGGGGCTTCTGATCACATGACCAGTTCCTCAAAATTATTTGAATCATACTCTCCGATGTACTGTAATGAAAAAATTTGAATTGCAGACGGTAGTTTTAATTCCATTGCAGGAAAAGGAACTATTAGACTATCCTAAAAAATTAATCTATATTCTGTATTGCATGTTGCAAAACTAGAATGTAATTTGTTATCTGTCAGTAAAATATCTAAGGATGCTAATTGTCGTGTCACCTTCTGTGATTCCCATTGTGTTTTTCCGGATCAGGGATCGGGGGAGATGATTGGGCGTGCTAGAATGCTTGAAGGTCTCTACTATTTTGAGGAACCCTCGACTAGTCATAAAACAGTTCGAGGCTTGAGTAGTGTTAGTTCTTCCCCTGTTAAAGAAACTATAATGCTTTGGCATCGTAGATTAGAGCATCCCAGTTTTTTCTATTTAAAGTATTTGTTTCCATATTTAAAGGTATTGATTGCTCCATTTTTCAGTGTGAAAGCTGTATTTTTGCAAAAAATCACAGATCAACTTATTCACCCAACTCTTACAAAGCATCTACTCCTTTTTACCTAATTCATAGTGATGTTTGGGGACCTTCAAAAGTTTTAACTCATAGTGAAAAACGGTGGTTTGTTAATTTTATTGATGACCATACTAGGTTAACCTGGATTTATTTGCTTAAAAACAAGTCAGATGTGAAAGATATTTTTATCCAGTTTTATAACATGATTGAAACTCATTCCAAACTAAAATTAGCATTTTGCATTCTGATAATGGAAAAGAGTATTTCAATGAATATTTAAATGAATTCTTTAAAGTCAAAGGTATTTTTCACCAATCGACGTGTCGTGACACTCCCCAACAAAATGGCATTGCTGAAAGGAAAAATAGACACTTACTTGATGTTGCTCGTGCACTTATGTTTTCTATGCATGTTCCTAATTATTTGTGGGGAGAAGCTATTCTTACGGCAGCGTATCTTATTAATCGAATGCCTTCAAAAAATTTGGATTTTAAGACACCCCTAGATCATTTTAAAACTTTTTTTTCCCTCCGTTCGCTTATTTTCTGATTTGCCTATCAAGGTTTTTGGGTGTACAACATATGTTCACCTTCCTAACATTTGTCGGTCTAAACTTGAGCCTAGGGCTTCTAAATGTATTTTAAGTGGATATGTTTCAAACAAGAAAGCATATAAATGTTTTTA

Coding sequence (CDS)

ATGATCGACAAGAAAGTCATTGATTCAGTTGAAAGTTCGGCTCTAGTAGTTAAAGCTACAACACATAAGGCATCAAATCAGGCACCCAAAAATAATGAAAAGCCTCGAGTCTGGTGTGATTACTGCAACAAGCCTCGACATACTCGTGAAACATGCTGGAAACTTCACGGAAACTCCATTAATCGGAAGAGTAATAAGCATGGCCCCACTTCATCTGATGACAGGAGTGTAAATCAACACTCATCTGGTAATCAATCATCATTCTCTGCTAATATTGCTGATTCTAATCCATTTAGCAAGGAGCAAGTCGATCAACTCCTGAAGCTGTTAAAGGTCAATTCATCATCGGGTAATCCCAGTGTTTCCTTGGCACAAACAGGTACTTGTCCTCAAGCCCTTTCTTGTCTTAACTCCTCCCCATGGATCATAGATTCCGGGGCTTCTGATCACATGACCAGTTCCTCAAAATTATTTGAATCATACTCTCCGATGTACTGTAATGAAAAAATTTGA

Protein sequence

MIDKKVIDSVESSALVVKATTHKASNQAPKNNEKPRVWCDYCNKPRHTRETCWKLHGNSINRKSNKHGPTSSDDRSVNQHSSGNQSSFSANIADSNPFSKEQVDQLLKLLKVNSSSGNPSVSLAQTGTCPQALSCLNSSPWIIDSGASDHMTSSSKLFESYSPMYCNEKI

Homology

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BLAST of Tan0008111 vs. NCBI nr
Match: KAG6468480.1 (hypothetical protein ZIOFF_073168 [Zingiber officinale])

HSP 1 Score: 151.4 bits (381), Expect = 7.2e-33
Identity = 91/177 (51.41%), Postives = 115/177 (64.97%), Query Frame = 0


Query: 1   MIDKK-VIDSVESSALVVKATTHKASNQAPKNNEKPRVWCDYCNKPRHTRETCWKLHGNS 60
           M++K+   +SVE+SAL          N   + ++KPRVWCD+CNKPRHTRETCWK+HG  
Sbjct: 112 MLEKRSTNESVENSALFTNVV-----NYQRRYDDKPRVWCDFCNKPRHTRETCWKIHGKP 171

Query: 61  INRKSNKHGPTSSDDRSVNQHSSGNQSSFSANIADSNPFSKEQVDQLLKLLKVNSSSGNP 120
            N K++K G               N+   +AN AD+ PF+K+Q+DQLLKL+K N SS  P
Sbjct: 172 ANWKNSKQG-------------EKNRGIPTANEADTGPFNKKQMDQLLKLIKSNFSSRIP 231

Query: 121 SVSLAQTGTCP------QALSCLNSSPWIIDSGASDHMTSSSKLFESYSPMYCNEKI 171
           SVSLAQT + P      +ALSCLNSS WIID GA DHM+S S LF++YSP   NEKI
Sbjct: 232 SVSLAQTCSNPKALHMSKALSCLNSSSWIIDFGAIDHMSSCSHLFDTYSPCSGNEKI 270

[Close]

BLAST of Tan0008111 vs. NCBI nr
Match: RVX14577.1 (hypothetical protein CK203_012112 [Vitis vinifera])

HSP 1 Score: 141.0 bits (354), Expect = 9.7e-30
Identity = 84/164 (51.22%), Postives = 106/164 (64.63%), Query Frame = 0


Query: 9   SVESSALVVKATTH-KASNQAPKNNEKPRVWCDYCNKPRHTRETCWKLHGNSINRKSNKH 68
           ++E SALV     + KA+    K++E+PRVWCD+CNKPRHTRE CWK+HG   N K    
Sbjct: 59  AIEGSALVTTGGGYNKAAAFQRKSDERPRVWCDFCNKPRHTRENCWKIHGKLANWK---- 118

Query: 69  GPTSSDDRSVNQHSSGNQSSFSANIADSNPFSKEQVDQLLKLLKVNSSSGNPSVSLAQTG 128
           G T            G     +AN A+++PF+ EQ++ LL LLK N +SG  SVSLA TG
Sbjct: 119 GKTGD--------KPGRAIIPTANEAETSPFTTEQMEHLLALLKSNLTSGTSSVSLAHTG 178

Query: 129 TCPQALS-CLNSSPWIIDSGASDHMTSSSKLFESYSPMYCNEKI 171
               ALS C  S+PWIIDSGASDHMT+SS +FESYSP   N+K+
Sbjct: 179 NELYALSCCFKSTPWIIDSGASDHMTNSSNMFESYSPCPGNKKV 210

[Close]

BLAST of Tan0008111 vs. NCBI nr
Match: CAN60902.1 (hypothetical protein VITISV_023048 [Vitis vinifera])

HSP 1 Score: 140.2 bits (352), Expect = 1.7e-29
Identity = 81/164 (49.39%), Postives = 105/164 (64.02%), Query Frame = 0


Query: 9   SVESSALVVKATTH-KASNQAPKNNEKPRVWCDYCNKPRHTRETCWKLHGNSINRKSNKH 68
           ++E SALV     + K      K++E+PRVWCD+CNKPRHT E CWK+HG   N K    
Sbjct: 59  AIEGSALVTTGGGYNKVVAFQRKSDERPRVWCDFCNKPRHTHENCWKIHGKPANWKGK-- 118

Query: 69  GPTSSDDRSVNQHSSGNQSSFSANIADSNPFSKEQVDQLLKLLKVNSSSGNPSVSLAQTG 128
            P+    R++           +AN A+++PF+ EQ++ LL LLK N +SG  SVSLA TG
Sbjct: 119 -PSDKPSRAIIP---------TANEAETSPFTTEQMEHLLALLKSNLTSGTSSVSLAHTG 178

Query: 129 TCPQALSC-LNSSPWIIDSGASDHMTSSSKLFESYSPMYCNEKI 171
               ALSC   S+PWIIDSGASDHMT+SS +FESYSP   N+K+
Sbjct: 179 NELYALSCRFKSTPWIIDSGASDHMTNSSNMFESYSPCLGNKKV 210

[Close]

BLAST of Tan0008111 vs. NCBI nr
Match: KAG6510170.1 (hypothetical protein ZIOFF_028179 [Zingiber officinale])

HSP 1 Score: 139.8 bits (351), Expect = 2.2e-29
Identity = 85/165 (51.52%), Postives = 102/165 (61.82%), Query Frame = 0


Query: 21  THKASNQAPKNNEKPR---------VWCDYCNKPRHTRETCWKLHGNSINRKSNKHGPTS 80
           +H      PK+ EK           V CD+CNKPRHTRETCWK++G   N K++K G   
Sbjct: 119 SHPLVKYLPKSEEKKAEGVSCSEKGVPCDFCNKPRHTRETCWKIYGKPANWKNSKQG--- 178

Query: 81  SDDRSVNQHSSGNQSSFSANIADSNPFSKEQVDQLLKLLKVNSSSGNPSVSLAQTGTCP- 140
                       N+    AN ADS  F+KEQ+DQLLKL+K N SS  PSVSLAQ G+ P 
Sbjct: 179 ----------EKNRGIPIANEADSGSFNKEQMDQLLKLIKSNFSSRIPSVSLAQIGSNPK 238

Query: 141 -----QALSCLNSSPWIIDSGASDHMTSSSKLFESYSPMYCNEKI 171
                +ALSCLNSSPWIIDSGA+DHM+S S LF++YSP   NEKI
Sbjct: 239 ALHMSEALSCLNSSPWIIDSGATDHMSSCSHLFDTYSPCSGNEKI 270

[Close]

BLAST of Tan0008111 vs. NCBI nr
Match: RVW50129.1 (Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera])

HSP 1 Score: 139.4 bits (350), Expect = 2.8e-29
Identity = 84/163 (51.53%), Postives = 105/163 (64.42%), Query Frame = 0


Query: 9   SVESSALVVKATTH-KASNQAPKNNEKPRVWCDYCNKPRHTRETCWKLHGNSINRKSNKH 68
           ++E SALV     + KA+    K++E+PRVWCD+CNKPRHTRE CWK+HG   N K    
Sbjct: 59  AIEGSALVTTGGGYNKAAAFQRKSDERPRVWCDFCNKPRHTRENCWKIHGKLANWK---- 118

Query: 69  GPTSSDDRSVNQHSSGNQSSFSANIADSNPFSKEQVDQLLKLLKVNSSSGNPSVSLAQTG 128
           G T            G     +AN A+++PF+ EQ++ LL LLK N +SG  SVSLA TG
Sbjct: 119 GKTGD--------KPGRAIIPTANEAETSPFTTEQMEHLLALLKSNLTSGTSSVSLAHTG 178

Query: 129 TCPQALS-CLNSSPWIIDSGASDHMTSSSKLFESYSPMYCNEK 170
               ALS C  S+PWIIDSGASDHMT+SS +FESYSP   N+K
Sbjct: 179 NELYALSCCFKSTPWIIDSGASDHMTNSSNMFESYSPCPGNKK 209

[Close]

BLAST of Tan0008111 vs. ExPASy TrEMBL
Match: A0A2N9I543 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS47035 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 7.5e-36
Identity = 98/165 (59.39%), Postives = 114/165 (69.09%), Query Frame = 0


Query: 9   SVESSALV-VKATTHKASNQAPKNNEKPRVWCDYCNKPRHTRETCWKLHGNSINRKSNKH 68
           +VESSALV   A + KA     + ++KPRVWCDYCNKPRHTRETCWK+HG   N KS+K 
Sbjct: 241 AVESSALVAADANSSKAITYQRRTDDKPRVWCDYCNKPRHTRETCWKIHGKPANWKSSKP 300

Query: 69  GPTSSDDRSVNQHSSGNQSSFSANIADSNPFSKEQVDQLLKLLKVNSSSGNPSVSLAQTG 128
           G     DRS        ++  +AN A+   F+KEQ++ LL LLK NSSSG PSVS+AQTG
Sbjct: 301 G-----DRS-------GRAFPTANEAEVTSFTKEQMEHLLTLLKSNSSSGIPSVSVAQTG 360

Query: 129 TCPQALS-CLNSS-PWIIDSGASDHMTSSSKLFESYSPMYCNEKI 171
             P ALS CLNSS PWIIDSGASDHMTSS   FESYSP    EK+
Sbjct: 361 NEPNALSCCLNSSTPWIIDSGASDHMTSSHNFFESYSPCSGIEKV 393

[Close]

BLAST of Tan0008111 vs. ExPASy TrEMBL
Match: A0A2N9EE05 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS847 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 2.2e-35
Identity = 98/165 (59.39%), Postives = 113/165 (68.48%), Query Frame = 0


Query: 9   SVESSALV-VKATTHKASNQAPKNNEKPRVWCDYCNKPRHTRETCWKLHGNSINRKSNKH 68
           +VESSALV   A + KA     + ++KPRVWCDYCNKP HTRETCWK+HG   N KS+K 
Sbjct: 487 AVESSALVAADANSSKAITYQRRTDDKPRVWCDYCNKPCHTRETCWKIHGKPANWKSSKP 546

Query: 69  GPTSSDDRSVNQHSSGNQSSFSANIADSNPFSKEQVDQLLKLLKVNSSSGNPSVSLAQTG 128
           G     DRS        Q+  +AN A+   F+KEQ++ LL LLK NSSSG PSVS+AQTG
Sbjct: 547 G-----DRS-------GQAFPTANEAEVTSFTKEQMEHLLTLLKSNSSSGIPSVSVAQTG 606

Query: 129 TCPQALS-CLNSS-PWIIDSGASDHMTSSSKLFESYSPMYCNEKI 171
             P ALS CLNSS PWIIDSGASDHMTSS   FESYSP    EK+
Sbjct: 607 NEPNALSCCLNSSAPWIIDSGASDHMTSSHNFFESYSPCSGIEKV 639

[Close]

BLAST of Tan0008111 vs. ExPASy TrEMBL
Match: A0A2N9GQ49 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29495 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 2.2e-35
Identity = 97/165 (58.79%), Postives = 114/165 (69.09%), Query Frame = 0


Query: 9   SVESSALV-VKATTHKASNQAPKNNEKPRVWCDYCNKPRHTRETCWKLHGNSINRKSNKH 68
           +VESSALV   A + KA     + ++KP+VWCDYCNKPRHTRETCWK+HG   N KS+K 
Sbjct: 241 AVESSALVAADANSSKAITYQRRTDDKPQVWCDYCNKPRHTRETCWKIHGKPANWKSSKP 300

Query: 69  GPTSSDDRSVNQHSSGNQSSFSANIADSNPFSKEQVDQLLKLLKVNSSSGNPSVSLAQTG 128
           G     DRS        ++  +AN A+   F+KEQ++ LL LLK NSSSG PSVS+AQTG
Sbjct: 301 G-----DRS-------GRAFPTANEAEVTSFTKEQMEHLLTLLKSNSSSGIPSVSVAQTG 360

Query: 129 TCPQALS-CLNSS-PWIIDSGASDHMTSSSKLFESYSPMYCNEKI 171
             P ALS CLNSS PWIIDSGASDHMTSS   FESYSP    EK+
Sbjct: 361 NEPNALSCCLNSSAPWIIDSGASDHMTSSHNFFESYSPCSGIEKV 393

[Close]

BLAST of Tan0008111 vs. ExPASy TrEMBL
Match: A0A438K044 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_012112 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 4.7e-30
Identity = 84/164 (51.22%), Postives = 106/164 (64.63%), Query Frame = 0


Query: 9   SVESSALVVKATTH-KASNQAPKNNEKPRVWCDYCNKPRHTRETCWKLHGNSINRKSNKH 68
           ++E SALV     + KA+    K++E+PRVWCD+CNKPRHTRE CWK+HG   N K    
Sbjct: 59  AIEGSALVTTGGGYNKAAAFQRKSDERPRVWCDFCNKPRHTRENCWKIHGKLANWK---- 118

Query: 69  GPTSSDDRSVNQHSSGNQSSFSANIADSNPFSKEQVDQLLKLLKVNSSSGNPSVSLAQTG 128
           G T            G     +AN A+++PF+ EQ++ LL LLK N +SG  SVSLA TG
Sbjct: 119 GKTGD--------KPGRAIIPTANEAETSPFTTEQMEHLLALLKSNLTSGTSSVSLAHTG 178

Query: 129 TCPQALS-CLNSSPWIIDSGASDHMTSSSKLFESYSPMYCNEKI 171
               ALS C  S+PWIIDSGASDHMT+SS +FESYSP   N+K+
Sbjct: 179 NELYALSCCFKSTPWIIDSGASDHMTNSSNMFESYSPCPGNKKV 210

[Close]

BLAST of Tan0008111 vs. ExPASy TrEMBL
Match: A5B3M7 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_023048 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 8.0e-30
Identity = 81/164 (49.39%), Postives = 105/164 (64.02%), Query Frame = 0


Query: 9   SVESSALVVKATTH-KASNQAPKNNEKPRVWCDYCNKPRHTRETCWKLHGNSINRKSNKH 68
           ++E SALV     + K      K++E+PRVWCD+CNKPRHT E CWK+HG   N K    
Sbjct: 59  AIEGSALVTTGGGYNKVVAFQRKSDERPRVWCDFCNKPRHTHENCWKIHGKPANWKGK-- 118

Query: 69  GPTSSDDRSVNQHSSGNQSSFSANIADSNPFSKEQVDQLLKLLKVNSSSGNPSVSLAQTG 128
            P+    R++           +AN A+++PF+ EQ++ LL LLK N +SG  SVSLA TG
Sbjct: 119 -PSDKPSRAIIP---------TANEAETSPFTTEQMEHLLALLKSNLTSGTSSVSLAHTG 178

Query: 129 TCPQALSC-LNSSPWIIDSGASDHMTSSSKLFESYSPMYCNEKI 171
               ALSC   S+PWIIDSGASDHMT+SS +FESYSP   N+K+
Sbjct: 179 NELYALSCRFKSTPWIIDSGASDHMTNSSNMFESYSPCLGNKKV 210

The following BLAST results are available for this feature:

BLAST of Tan0008111 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0008111 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6468480.1	7.2e-33	51.41	hypothetical protein ZIOFF_073168 [Zingiber officinale]	[more]
RVX14577.1	9.7e-30	51.22	hypothetical protein CK203_012112 [Vitis vinifera]	[more]
CAN60902.1	1.7e-29	49.39	hypothetical protein VITISV_023048 [Vitis vinifera]	[more]
KAG6510170.1	2.2e-29	51.52	hypothetical protein ZIOFF_028179 [Zingiber officinale]	[more]
RVW50129.1	2.8e-29	51.53	Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]	[more]

BLAST of Tan0008111 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2N9I543	7.5e-36	59.39	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS47035 PE=4 SV=1	[more]
A0A2N9EE05	2.2e-35	59.39	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS847 PE=4 SV=1	[more]
A0A2N9GQ49	2.2e-35	58.79	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29495 PE=4 SV=1	[more]
A0A438K044	4.7e-30	51.22	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_012112 PE=4 SV=1	[more]
A5B3M7	8.0e-30	49.39	Reverse transcriptase Ty1/copia-type domain-containing protein OS=Vitis vinifera...	[more]

BLAST of Tan0008111 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0008111.1	Tan0008111.1	mRNA