Tan0008097 (gene) Snake gourd v1

Overview


Name	Tan0008097
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	RNA polymerase sigma factor
Location	LG06: 72191828 .. 72197659 (-)
RNA-Seq Expression	Tan0008097
Synteny	Tan0008097

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTATGTAAAAATTCCGTTTTGAAAAGAGCTCTCTCTCTCTCACATAAATAAGTTGGGGTGAGGCAAGGCAAAGTGGCAACCTCTTATCCATTGTTTTATCAACAAAGCCTCCAAATGCCAATTTACCAACACAAGTTTTCCTCTCCACTCCTCTCTCAGTCCTCCATTCTCCATTGCTTCTTCTTCTCCACCACCCAGTTCTTCAATTCCCCATCTCTGAAATCCTTCCTCAATCTTCTCTTTTCCATTTCCCAATGAAACCCTTTTCATATTCCTCACATTTTCCCTTCTGGGTCACCTCCCGAGTTCAATTTTGAATGATTTCTTCTTTAATGTCCGCCATAGTTGCAGAGTAGCAGAACCCAGTTGGAGTGCAGAGTAGCAGAACCCAGTTGGAGAACGAAGAAGAAGAAGAACAAGGCGATGTCGTGTTTACTTCCCCAATTCAAGTGCCATCCTGAAACATTCTCAATCCAATTTAAGACCACCGCCATCACGATTACAACTACGGCTAACTATTCTCACCATCATAGCTTTCTTCCCACTGCCAATTCCACTTACAGTGAGTGTTTTACTCTGGCATTCTCTCTTTTTTCGACCTTTTGTTTTGTTATCTTCAAATGGGGTTTTGCTGTTTTGCGTTGCTTCATTGTCAAGCTTGGCTAAAATGGCTCGTGACTAGTTGGTTAGTTCAGCCTTATGTTCAAGTTTTTGAGTTGGATTGCTTGAAATGTTGTTCTGAGATTCTTTGTTTTAGGTGGCCATCATGTTGTGTGCAAGGATTTACAAATGTGGTTGTTTAAGCCGTGTTTGATAATTTTTTGTTTTTGGTTTTTGAATATTAAACATATAAATAATATTACTTCCACCTCTGAATTTCCATATTTTCTTATGTATTTTTTACCTATGTTTTGAAAAACCAAACCGAGTTTTTAAAACTAAAAAAGTAGTTTTCAAAAACTTATTTTTGATTTTGGAATTTGGCTAGAAACTCAAATGTTTGAGAGGTGAAAACCATTATAGGAAAGATGAAAAGTACACTAGATAAATTGTGAGAAAATAAGCCCAATTTTTTAAAACCAAAAGCTAAAAAGCAAATGGATATCAAATAGCACCTTCGTGTCTAAGTTCTGGTTTGTATTAAAGCATTTCCCAAATGGTGCTGATTTTGATGTTGCTATTGTATCTGATAAAGATTGAGACTTAAATTTCCCTTTTCAAGTAATATCGTGCAAGTTTGAAGAGGTTGAATGTTCCTCGTGTTATTGAAATACTAAGTTGTGTTATCTGCCATAGATATGGTTTATTAGTCTAGGCTGGGCCATTTTGGCTATGTGGTGCTCAATGAAGTGATGGGAAAATATGTCCAATCCATTTTAGAGAACAAATTCTAGTTAAAACAAGATGCCTCCAAGGCAAAATAATGATGGATGTAGTTTTTGAGACCATTCATTCAATTTGTCTACTATTTACCCAGATTATCTTTAATGATGTATGTAACCAGTAGTTGGATAGAATGTTAGCTTGGTGTAGCTTTGTTGGTTAGAGATAAAATATAGTTGCACACAACGTATCCAACAATCAATTTTCTCTCTTTAAACATTTAGGCCCCATTTGATAACTATTTCCACATCACATACCTAGGATTAATTCCTACGTGTTTCCTTTTCAACCAAATGTAGTAAGTTCAGGCGATTGTCTGGTGAGAATGTAGAGGTGCGCACAAGCTGACCTACTCATCGATATCAAAAAAAAAAAAAAAGAAACACTATTTCTACCCATGAGTTTCTTTGCTTTGTTATCTACTTTTTACAAATGTTTTCAAAATCCAAGTCAAGTTTTGAGATCTAAAAAGTAGTTTTGACCCCGTTTGATAACCATTTGGTTTTTGAAAATTATGCTTGTTTTTTCACAATTTCTCTCCATCTTCTCTACAATGATGCCCATTTTTCTTAAGGTACCACTTAAGTTTCTAGCCAAATTTCAAAAACAAAAACAAGTTTTTAAAAACTACTTTTTTTAGTTTTCAAAACTTAGCTTGGTTTTTTAAAACATAGGTACAAAGTAGATAAGAAAATATAGAAACTCATTGGTAGAAGTTGTTATTTTAGGCTTAATTTTCAAAAACCAGAAACAAAAAACAAAATGGTTATCAAACGGGGTCTTTGTTTTTTAGATTTGGTCAAGATTTCAAATCTTTCCTTAAGTAAGATGAAAATCATTCTAAAGAAATTGGAAGAAAACAAGCACGATTTTTAAAAACAGAAAACGAAAAATGAAGGCCATATTTGATAACTATTTGGTTTTTGAAAATTGTTCTGGTTTTCTGGTAACTTCTCTATAATGGTTTTCATATTCTCTACAATGATTTTCATCTTTCTTTAGGAAACATAGCCAAATTCCAAAAAACAAAAACAAAGTTTTTGAAAACTTGACTTAGTTTCTGTAAACATATGGAAAAAGTAGATAAGAAAACATGGAAACTCATAGGTAGATGTAGTATTTATAGGCTTTATTTTCAAAAACCAAAAATAAAAAACCAAATGGTTACCAAACAGGATCGAAATCGTTATCAAACAAAGACCTTAGTTACTATCAGTATTGAGTTGGTCTTGTTTAGCTATTGGGGGTGATTGCTTACTTATTGTTTAAGTAGAATGGAGAAGCAAAGTCCCAAGCATATGAAATTTTTGCACCAGAGGGTCCTAGAGCAAGAAGCAAAGTTTTCTGTGTCGATTTCTACTCTTATGTGAAACACTCTTAAAACAGCTGATTTCCCATTAGAATTTTCGTCTAAATGAAACATGATTAAAAGTTTTGATAGATGAAAGTATATTGATGATCCATCTATAACTAAGAAGTTCATTTAATTGAATGTTAGTGCCAGCAATGCCGATAGATTTTATTGAAATATTTTCTTGTAAAATTTTGAATCATGCAGCTAAAGTCAGAGATCCTCATAGTTTACGGACACAATGTATCTTGTCCGCAGCATCACCACCAACATCGACCGGAACAACTACAACATTCAATGTGGATCGACTTAAATTGCCTCCTTTTGATACGAACACCGACTCAGTCTCTGCAGAAAGACTAAGATCATATTTAGGTGCAGTTGAATCGAGCCTAGCCTCAACACTTCTTACCAGTGAGGAGGCTACAATTGCAGCTGCCGCAGCTGAAGCAGTTACTCTTGCAAAAGCAGCCGTCAAGGTTGCAAAGGATGCAGCTCTTCTGGTTAATAATAGCAACTCTTCCAGAACAGGAACAAAATCTCAATCGTCTCTGAAAACTGATACTTTACATTTCAAATGGGCTCAGTTTATGGAATCCGAAAGGGCTGATATAATAGGAGAGTCAATAGGAGTTAATAATCGCCCTGTGGATGGTGATGCTTTGGAACACAGTACCGCAGAATCTGATTATATGGAGCCAACGTCTGAAGAACTTGAACTTTTACAGGATGAACTCTCTAAGAATATAGCCGTAAGATCAAATCGTCAAACAGAACGAAAGGCCAGAAGAACTAGAGCAGCAGAGAAGACTGCTTCTAGTGTGGTGTCATTGAAGTCCGGTTCTAGCAGCAGGAAGAAGCGTAATTCCTTACAAGAAGTTGACTACTCTGACCCATTGCGTTATTTGAGAGCAACTACAAGCACTTCTAGACTTCTTACTGCAACTGAAGAACTTGAACTGTCAGAAGGAATTCAGGTTTGATTTTCAGCCATTTTAACTGTTTTCTAAAATCATGTCTTTCTACTGGATCAAAGACCACATTGCACTTGAGAAAGTTAACATGGATCTGCAAGTGAAAATGAAATAAAATCAACTCATCCATGCCTTCATGAAATTCAGCTTCAGAACTCAACTTTACAGTCATTACTAAATCTGGACTTGTTTGTTCGTAACCAAGAAACACCGTGTCAAATAACTTTTGTGATTCATCTCAATCGGATAGAATTTTCAAAATTAATTGGGAATGGAAAAGGTGAAGCAAATGAAGTGGATATACACAAACCAAGGAAAATGTTTGGGTTGATCCTATTTTCTTTAAAACCTAGCAGTATTCTTCAATTTCGAAGAATCGATACTATTGCAGTCAAACCTTGGTGAAAGGGCCGTAGCACTACTAGTTTAAAATTACTGATAGCTCTGTTATGTTCGTTAAAACTTCCAATAAGTAGTCTAATGCAGCTTCTAAATAGAATTAGTTTCCTGCCTTGAATTTGATTCTTGAATGGAATGCATAGAATTATGCTATATCACCATGATGGCTCTTTAGATGGCGTTTTTGGGTTAATATCCAAGTTTATTCGTTATGTTCCACGTGCTCCTTTTGATTACTGACATTTGTTCCAACTATTTCCTGAACCAGGACTTGCTGAAACTGGAAAGACTCCAGGAGGAGCTTGCAGAACGTTATGGGAATGAGCCAACCTTTGCACAATGGGCTGCTGCTGCTGGAGTCAATCAGAGGACGCTGAGAAAGCGTCTAAACCATGGTACTTTTTGTAAAGACAAAATGATAAAAAGCAACATTCGTCTTGTCATATCGATTGCAAAAAATTATCAGGGAGCGGGGATGAATCTCCAAGATCTAGTTCAGGTACTTTTTCATTATTGCACGCCAGCCAAAATGCAAAATTATGAATGCCTTGTTTTAATTTTGAATGACTCATTGCTTGTGTTGTGAGACGCAGGAAGGATGTCGAGGCCTTGTACGAGGTGCGGAGAAGTTTGATGCTTCAAAAGGCTTCAAGTTTTCAACCTATGCTCATTGGTGGATTAAGCAGGCGGTTCGAAAGTCTCTTTCTGATCAGTCCAGGACTATTCGCTTGCCAGTATGTTCTTTTCGCCCGAATTTGTTCCAGCAAAAAAAATATTAAATTGCTTTGTCAAATTCATTATAGAACAATACAGGGGAGAAAAAAATATAACCTATGAAAATGGCAATGAACTTACTTATTATTCACACTTTCCCAACAATCAATGATTGGGCAGTTTCACATGGTGGAAGCAACTTATAGGGTGAAGGAGGCTAGAAAGCAATTATATAGTGAAAATGGAAGACATCCTGACGATGAAGAAATCGCCGAAGCAGCGGGGCTGTCGATGAAGAGGCTTGCTGCAGTATTAATGACTCCAAAAGCACCCCGGTCCTTGGAGCAGAAAATCGGGATCAACCAAAATCTCAAACCTTCGGTCCGTCTTATTGCTACTTGGACTTTTCTTTCTCTCCAATTGCAATATCAACATCTTTTAACTAATTGATTCTCGTGATCTTTTCCAGGAAGTCATTTCCGACCCGGAAGCAGAAACTGCAGAAGATCTGTTGATAAAACAGTTCATGAAGCAGGATCTCGAAAAGGTACTCGACTCCCTTAATCCGAGAGAGAGACAAGTAATTAGATGGAGGTTTGGCATGGAAGATGGGAGGATGAAAACATTGCAAGAAATAGGAGAAATAATGGGTGTAAGTAGGGAAAGAATTAGACAAATTGAGTCATGTGCATTCAGAAAACTCAAAAACAAGAAGAGAACTAAACATTTGCAGCAGTATCTGATGTCATGATGAGTCTCCCTCAGATTCAAGAGTTAGATTCCTCCAAAAGTATCTATTATTATCTGATATGAGGCTCAAACAAGGCTTGTTCTTTTTTCCCTTTTCTTTTTCTTTTTTCTTTTTCCTGTAACATATATTATTATGCATCTTCTTTCTCATTTTGAGGATAGAGTAGTAGTATCCTGATTGTTTACAGAATAATAGGTATTTTCTGTTCATACATATTCATTTTTAATCAAGAAATTTCTCTTAATCCATGATTGTGGCC

mRNA sequence

ATTATGTAAAAATTCCGTTTTGAAAAGAGCTCTCTCTCTCTCACATAAATAAGTTGGGGTGAGGCAAGGCAAAGTGGCAACCTCTTATCCATTGTTTTATCAACAAAGCCTCCAAATGCCAATTTACCAACACAAGTTTTCCTCTCCACTCCTCTCTCAGTCCTCCATTCTCCATTGCTTCTTCTTCTCCACCACCCAGTTCTTCAATTCCCCATCTCTGAAATCCTTCCTCAATCTTCTCTTTTCCATTTCCCAATGAAACCCTTTTCATATTCCTCACATTTTCCCTTCTGGGTCACCTCCCGAGTTCAATTTTGAATGATTTCTTCTTTAATGTCCGCCATAGTTGCAGAGTAGCAGAACCCAGTTGGAGTGCAGAGTAGCAGAACCCAGTTGGAGAACGAAGAAGAAGAAGAACAAGGCGATGTCGTGTTTACTTCCCCAATTCAAGTGCCATCCTGAAACATTCTCAATCCAATTTAAGACCACCGCCATCACGATTACAACTACGGCTAACTATTCTCACCATCATAGCTTTCTTCCCACTGCCAATTCCACTTACACTAAAGTCAGAGATCCTCATAGTTTACGGACACAATGTATCTTGTCCGCAGCATCACCACCAACATCGACCGGAACAACTACAACATTCAATGTGGATCGACTTAAATTGCCTCCTTTTGATACGAACACCGACTCAGTCTCTGCAGAAAGACTAAGATCATATTTAGGTGCAGTTGAATCGAGCCTAGCCTCAACACTTCTTACCAGTGAGGAGGCTACAATTGCAGCTGCCGCAGCTGAAGCAGTTACTCTTGCAAAAGCAGCCGTCAAGGTTGCAAAGGATGCAGCTCTTCTGGTTAATAATAGCAACTCTTCCAGAACAGGAACAAAATCTCAATCGTCTCTGAAAACTGATACTTTACATTTCAAATGGGCTCAGTTTATGGAATCCGAAAGGGCTGATATAATAGGAGAGTCAATAGGAGTTAATAATCGCCCTGTGGATGGTGATGCTTTGGAACACAGTACCGCAGAATCTGATTATATGGAGCCAACGTCTGAAGAACTTGAACTTTTACAGGATGAACTCTCTAAGAATATAGCCGTAAGATCAAATCGTCAAACAGAACGAAAGGCCAGAAGAACTAGAGCAGCAGAGAAGACTGCTTCTAGTGTGGTGTCATTGAAGTCCGGTTCTAGCAGCAGGAAGAAGCGTAATTCCTTACAAGAAGTTGACTACTCTGACCCATTGCGTTATTTGAGAGCAACTACAAGCACTTCTAGACTTCTTACTGCAACTGAAGAACTTGAACTGTCAGAAGGAATTCAGGACTTGCTGAAACTGGAAAGACTCCAGGAGGAGCTTGCAGAACGTTATGGGAATGAGCCAACCTTTGCACAATGGGCTGCTGCTGCTGGAGTCAATCAGAGGACGCTGAGAAAGCGTCTAAACCATGGTACTTTTTGTAAAGACAAAATGATAAAAAGCAACATTCGTCTTGTCATATCGATTGCAAAAAATTATCAGGGAGCGGGGATGAATCTCCAAGATCTAGTTCAGGAAGGATGTCGAGGCCTTGTACGAGGTGCGGAGAAGTTTGATGCTTCAAAAGGCTTCAAGTTTTCAACCTATGCTCATTGGTGGATTAAGCAGGCGGTTCGAAAGTCTCTTTCTGATCAGTCCAGGACTATTCGCTTGCCATTTCACATGGTGGAAGCAACTTATAGGGTGAAGGAGGCTAGAAAGCAATTATATAGTGAAAATGGAAGACATCCTGACGATGAAGAAATCGCCGAAGCAGCGGGGCTGTCGATGAAGAGGCTTGCTGCAGTATTAATGACTCCAAAAGCACCCCGGTCCTTGGAGCAGAAAATCGGGATCAACCAAAATCTCAAACCTTCGGAAGTCATTTCCGACCCGGAAGCAGAAACTGCAGAAGATCTGTTGATAAAACAGTTCATGAAGCAGGATCTCGAAAAGGTACTCGACTCCCTTAATCCGAGAGAGAGACAAGTAATTAGATGGAGGTTTGGCATGGAAGATGGGAGGATGAAAACATTGCAAGAAATAGGAGAAATAATGGGTGTAAGTAGGGAAAGAATTAGACAAATTGAGTCATGTGCATTCAGAAAACTCAAAAACAAGAAGAGAACTAAACATTTGCAGCAGTATCTGATGTCATGATGAGTCTCCCTCAGATTCAAGAGTTAGATTCCTCCAAAAGTATCTATTATTATCTGATATGAGGCTCAAACAAGGCTTGTTCTTTTTTCCCTTTTCTTTTTCTTTTTTCTTTTTCCTGTAACATATATTATTATGCATCTTCTTTCTCATTTTGAGGATAGAGTAGTAGTATCCTGATTGTTTACAGAATAATAGGTATTTTCTGTTCATACATATTCATTTTTAATCAAGAAATTTCTCTTAATCCATGATTGTGGCC

Coding sequence (CDS)

ATGTCGTGTTTACTTCCCCAATTCAAGTGCCATCCTGAAACATTCTCAATCCAATTTAAGACCACCGCCATCACGATTACAACTACGGCTAACTATTCTCACCATCATAGCTTTCTTCCCACTGCCAATTCCACTTACACTAAAGTCAGAGATCCTCATAGTTTACGGACACAATGTATCTTGTCCGCAGCATCACCACCAACATCGACCGGAACAACTACAACATTCAATGTGGATCGACTTAAATTGCCTCCTTTTGATACGAACACCGACTCAGTCTCTGCAGAAAGACTAAGATCATATTTAGGTGCAGTTGAATCGAGCCTAGCCTCAACACTTCTTACCAGTGAGGAGGCTACAATTGCAGCTGCCGCAGCTGAAGCAGTTACTCTTGCAAAAGCAGCCGTCAAGGTTGCAAAGGATGCAGCTCTTCTGGTTAATAATAGCAACTCTTCCAGAACAGGAACAAAATCTCAATCGTCTCTGAAAACTGATACTTTACATTTCAAATGGGCTCAGTTTATGGAATCCGAAAGGGCTGATATAATAGGAGAGTCAATAGGAGTTAATAATCGCCCTGTGGATGGTGATGCTTTGGAACACAGTACCGCAGAATCTGATTATATGGAGCCAACGTCTGAAGAACTTGAACTTTTACAGGATGAACTCTCTAAGAATATAGCCGTAAGATCAAATCGTCAAACAGAACGAAAGGCCAGAAGAACTAGAGCAGCAGAGAAGACTGCTTCTAGTGTGGTGTCATTGAAGTCCGGTTCTAGCAGCAGGAAGAAGCGTAATTCCTTACAAGAAGTTGACTACTCTGACCCATTGCGTTATTTGAGAGCAACTACAAGCACTTCTAGACTTCTTACTGCAACTGAAGAACTTGAACTGTCAGAAGGAATTCAGGACTTGCTGAAACTGGAAAGACTCCAGGAGGAGCTTGCAGAACGTTATGGGAATGAGCCAACCTTTGCACAATGGGCTGCTGCTGCTGGAGTCAATCAGAGGACGCTGAGAAAGCGTCTAAACCATGGTACTTTTTGTAAAGACAAAATGATAAAAAGCAACATTCGTCTTGTCATATCGATTGCAAAAAATTATCAGGGAGCGGGGATGAATCTCCAAGATCTAGTTCAGGAAGGATGTCGAGGCCTTGTACGAGGTGCGGAGAAGTTTGATGCTTCAAAAGGCTTCAAGTTTTCAACCTATGCTCATTGGTGGATTAAGCAGGCGGTTCGAAAGTCTCTTTCTGATCAGTCCAGGACTATTCGCTTGCCATTTCACATGGTGGAAGCAACTTATAGGGTGAAGGAGGCTAGAAAGCAATTATATAGTGAAAATGGAAGACATCCTGACGATGAAGAAATCGCCGAAGCAGCGGGGCTGTCGATGAAGAGGCTTGCTGCAGTATTAATGACTCCAAAAGCACCCCGGTCCTTGGAGCAGAAAATCGGGATCAACCAAAATCTCAAACCTTCGGAAGTCATTTCCGACCCGGAAGCAGAAACTGCAGAAGATCTGTTGATAAAACAGTTCATGAAGCAGGATCTCGAAAAGGTACTCGACTCCCTTAATCCGAGAGAGAGACAAGTAATTAGATGGAGGTTTGGCATGGAAGATGGGAGGATGAAAACATTGCAAGAAATAGGAGAAATAATGGGTGTAAGTAGGGAAAGAATTAGACAAATTGAGTCATGTGCATTCAGAAAACTCAAAAACAAGAAGAGAACTAAACATTTGCAGCAGTATCTGATGTCATGA

Protein sequence

MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHHSFLPTANSTYTKVRDPHSLRTQCILSAASPPTSTGTTTTFNVDRLKLPPFDTNTDSVSAERLRSYLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSLKTDTLHFKWAQFMESERADIIGESIGVNNRPVDGDALEHSTAESDYMEPTSEELELLQDELSKNIAVRSNRQTERKARRTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS

Homology

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BLAST of Tan0008097 vs. ExPASy Swiss-Prot
Match: O22056 (RNA polymerase sigma factor sigB OS=Arabidopsis thaliana OX=3702 GN=SIGB PE=2 SV=2)

HSP 1 Score: 661.4 bits (1705), Expect = 9.7e-189
Identity = 380/599 (63.44%), Postives = 456/599 (76.13%), Query Frame = 0


Query: 2   SCLLPQFKCHPETFSIQFKTTAITITTTANYSHHHSFLPTANSTYTKVRDPHSLRTQCIL 61
           SCLLPQFKC P++FSI F+T               SF    ++  +    P     QC +
Sbjct: 3   SCLLPQFKCPPDSFSIHFRT---------------SFCAPKHNKGSVFFQP-----QCAV 62

Query: 62  SAASPPTSTGTTTTFNVDRLKLPPFDTNTDSVSAERLRSYLGA---------VESSLAST 121
           S  SP      T+  +V +L+LP FDT++DS+ ++R  +Y            +E+  + T
Sbjct: 63  S-TSPAL---LTSMLDVAKLRLPSFDTDSDSLISDRQWTYTRPDGPSTEAKYLEALASET 122

Query: 122 LLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSLKTDTLHFKWA 181
           LLTS+EA + AAAAEAV LA+AAVKVAKDA L   NSN++   T S +  ++     KW 
Sbjct: 123 LLTSDEAVVVAAAAEAVALARAAVKVAKDATLF-KNSNNTNLLTSSTADKRS-----KWD 182

Query: 182 QFMESERADIIGESIGVNNRPVDGDALEHSTAE----SDYMEPTSEELELLQDELSKNIA 241
           QF E ERA I+G  + V++  +  D +  S +      D      EE+ELL+++ S ++A
Sbjct: 183 QFTEKERAGILGH-LAVSDNGIVSDKITASASNKESIGDLESEKQEEVELLEEQPSVSLA 242

Query: 242 VRSNRQTERKARRTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSR 301
           VRS RQTERKARR +  EKTAS + S+K+GSS +KKR   QEVD++DPLRYLR TTS+S+
Sbjct: 243 VRSTRQTERKARRAKGLEKTASGIPSVKTGSSPKKKRLVAQEVDHNDPLRYLRMTTSSSK 302

Query: 302 LLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTF 361
           LLT  EE ELS GIQDLLKLERLQ EL ER G +PTFAQWA+AAGV+Q++LR+R++HGT 
Sbjct: 303 LLTVREEHELSAGIQDLLKLERLQTELTERSGRQPTFAQWASAAGVDQKSLRQRIHHGTL 362

Query: 362 CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWW 421
           CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWW
Sbjct: 363 CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWW 422

Query: 422 IKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRL 481
           IKQAVRKSLSDQSR IRLPFHMVEATYRVKEARKQLYSE G+HP +EEIAEA GLSMKRL
Sbjct: 423 IKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYSETGKHPKNEEIAEATGLSMKRL 482

Query: 482 AAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAEDLLIKQFMKQDLEKVLDSLNPR 541
            AVL++PK PRSL+QKIG+NQNLKPSEVI+DPEA T+ED+LIK+FM+QDL+KVLDSL  R
Sbjct: 483 MAVLLSPKPPRSLDQKIGMNQNLKPSEVIADPEAVTSEDILIKEFMRQDLDKVLDSLGTR 542

Query: 542 ERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS 588
           E+QVIRWRFGMEDGRMKTLQEIGE+MGVSRER+RQIES AFRKLKNKKR  HLQQYL++
Sbjct: 543 EKQVIRWRFGMEDGRMKTLQEIGEMMGVSRERVRQIESSAFRKLKNKKRNNHLQQYLVA 570

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BLAST of Tan0008097 vs. ExPASy Swiss-Prot
Match: P26683 (RNA polymerase sigma factor SigA OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=sigA PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.7e-76
Identity = 154/332 (46.39%), Postives = 225/332 (67.77%), Query Frame = 0


Query: 256 KSGSSSRKKRNSLQEVDY--SDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQE 315
           KSG +++ +R +  +  +   D +R         RLL A EE+EL+  I DLL+LER++E
Sbjct: 59  KSGKAAKSRRRTQSKKKHYTEDSIRLYLQEIGRIRLLRADEEIELARKIADLLELERVRE 118

Query: 316 ELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGM 375
            L+E+   +P  ++WA A  +     R RL+ G   KDKM++SN+RLV+SIAK Y   G+
Sbjct: 119 RLSEKLERDPRDSEWAEAVQLPLPAFRYRLHIGRRAKDKMVQSNLRLVVSIAKKYMNRGL 178

Query: 376 NLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEA 435
           + QDL+QEG  GL+R AEKFD  KG+KFSTYA WWI+QA+ ++++DQSRTIRLP H+ E 
Sbjct: 179 SFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYET 238

Query: 436 TYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKP 495
             R+K+  K L  E GR P +EEIA    +++++L  +  + + P SLE  IG  ++ + 
Sbjct: 239 ISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRL 298

Query: 496 SEVISDPEAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEI 555
            + I + + ET ED + K  +++DLEKVLDSL+PRER V+R R+G++DGRMKTL+EIG+I
Sbjct: 299 GDFI-ESDGETPEDQVSKNLLREDLEKVLDSLSPRERDVLRLRYGLDDGRMKTLEEIGQI 358

Query: 556 MGVSRERIRQIESCAFRKLKNKKRTKHLQQYL 586
             V+RERIRQIE+ A RKL++  R   L++Y+
Sbjct: 359 FNVTRERIRQIEAKALRKLRHPNRNSVLKEYI 389

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BLAST of Tan0008097 vs. ExPASy Swiss-Prot
Match: P38023 (RNA polymerase sigma factor SigA1 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=sigA1 PE=3 SV=2)

HSP 1 Score: 280.4 bits (716), Expect = 4.6e-74
Identity = 149/326 (45.71%), Postives = 218/326 (66.87%), Query Frame = 0


Query: 260 SSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERY 319
           ++ K +  +++    D +R         RLL A EE+EL+  I DLL LER+++EL E+ 
Sbjct: 74  AAAKAKAKVRKTYTEDSIRLYLQEIGRIRLLRADEEIELARQIADLLALERIRDELLEQL 133

Query: 320 GNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLV 379
              P+ A+WAAA        R+RL  G   KDKM++SN+RLV+SIAK Y   G++ QDL+
Sbjct: 134 DRLPSDAEWAAAVDSPLDEFRRRLFRGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLI 193

Query: 380 QEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKE 439
           QEG  GL+R AEKFD  KG+KFSTYA WWI+QA+ ++++DQSRTIRLP H+ E   R+K+
Sbjct: 194 QEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKK 253

Query: 440 ARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISD 499
             K L  E GR P +EEIA    +++++L  +  + + P SLE  IG  ++ +  + I +
Sbjct: 254 TTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFI-E 313

Query: 500 PEAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRE 559
            + ET ED + K  +++DLE VL +L+PRER V+R R+G++DGRMKTL+EIG++  V+RE
Sbjct: 314 ADGETPEDEVAKNLLREDLEGVLSTLSPRERDVLRLRYGLDDGRMKTLEEIGQLFNVTRE 373

Query: 560 RIRQIESCAFRKLKNKKRTKHLQQYL 586
           RIRQIE+ A RKL++  R   L++Y+
Sbjct: 374 RIRQIEAKALRKLRHPNRNSILKEYI 398

[Close]

BLAST of Tan0008097 vs. ExPASy Swiss-Prot
Match: P52322 (RNA polymerase sigma factor SigA OS=Microcystis aeruginosa OX=1126 GN=sigA PE=3 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 3.8e-68
Identity = 149/366 (40.71%), Postives = 223/366 (60.93%), Query Frame = 0


Query: 260 SSRKKRNSLQEVDYS-DPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEE---- 319
           +S ++R++ ++  Y+ D +R         RLL A EE+EL+  I DLLKLER++E+    
Sbjct: 51  ASARRRDAARKKPYTEDSIRIYLQEIGRIRLLRAEEEIELARKIADLLKLERIREDFCLY 110

Query: 320 ------------------LAERYGNEPTFA-----------------QWAAAAGVNQRTL 379
                             + E+   EP  +                 +W A +       
Sbjct: 111 SDAEWGKQVFLFERIEKIIVEKSEKEPKLSDIKAYLGKTELTAPLLEEWLAKSKEYLSAF 170

Query: 380 RKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGF 439
           ++RL HG   K+KM++SN+RLV+SIAK Y   G++ QDL+QEG  GL+R AEKFD  KG+
Sbjct: 171 KRRLYHGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGY 230

Query: 440 KFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAE 499
           KFSTYA WWI+QA+ ++++DQSRTIRLP H+ E   R+K+  K L  E  R P +EEIA 
Sbjct: 231 KFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKILSQEMRRKPTEEEIAT 290

Query: 500 AAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAEDLLIKQFMKQDLE 559
              +++++L  +  + + P SLE  IG  ++ +  + I + + ET ED + K  +++DLE
Sbjct: 291 KMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFI-EADGETPEDEVSKNLLREDLE 350

Query: 560 KVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTK 586
            VLD+L+PRER V+R R+G++DGRMKTL+EIG+I  V+RERIRQIE+ A RKL++  R  
Sbjct: 351 NVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRHPNRNS 410

[Close]

BLAST of Tan0008097 vs. ExPASy Swiss-Prot
Match: P74565 (RNA polymerase sigma factor SigA OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=sigA PE=3 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 6.7e-65
Identity = 144/367 (39.24%), Postives = 217/367 (59.13%), Query Frame = 0


Query: 264 KRNSLQEVDYS-DPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNE 323
           +++++++  Y+ D +R         RLL A EE+EL+  I DLL+LE +++ L  +   +
Sbjct: 59  RKDAVKKKPYTEDSIRIYLQEIGRIRLLRAEEEIELARQIADLLELELIRDNLTLQLERQ 118

Query: 324 PTFA--------------------------------------------QWAAAAGVNQRT 383
           P+                                              +W+     N   
Sbjct: 119 PSELEWGKQVWKLETAKQRLVGDKKKEPKKKDIDSYLANPDNELSLENEWSQQPNKNFAA 178

Query: 384 LRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKG 443
            R+RL      KDKM++SN+RLV+SIAK Y   G++ QDL+QEG  GL+R AEKFD  KG
Sbjct: 179 FRRRLFLDRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKG 238

Query: 444 FKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIA 503
           +KFSTYA WWI+QA+ ++++DQSRTIRLP H+ E   R+K+  K L  E  R P +EEIA
Sbjct: 239 YKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMRRKPTEEEIA 298

Query: 504 EAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAEDLLIKQFMKQDL 563
           E   +++++L  +  + + P SLE  IG  ++ +  + I + + ET ED + K  +++DL
Sbjct: 299 EKMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFI-EADGETPEDEVSKNLLREDL 358

Query: 564 EKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRT 586
           E VLD+L+PRER V+R R+G++DGRMKTL+EIG+I  V+RERIRQIE+ A RKL++  R 
Sbjct: 359 ENVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRHPNRN 418

[Close]

BLAST of Tan0008097 vs. NCBI nr
Match: XP_022155781.1 (RNA polymerase sigma factor sigB [Momordica charantia])

HSP 1 Score: 1028.9 bits (2659), Expect = 1.8e-296
Identity = 546/587 (93.02%), Postives = 565/587 (96.25%), Query Frame = 0


Query: 1   MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHHSFLPTANSTYTKVRDPHSLRTQCI 60
           MSCLLPQFKCHPETFSIQFKTTAIT+TTTANYSHHH+FLPTANS+ TKVRDPHSLRTQCI
Sbjct: 1   MSCLLPQFKCHPETFSIQFKTTAITVTTTANYSHHHNFLPTANSSCTKVRDPHSLRTQCI 60

Query: 61  LSAASPPTSTGTTTTFNVDRLKLPPFDTNTDSVSAERLRSYLGAVESSLASTLLTSEEAT 120
           LSAASP TSTGT TTFNV+RLKLPP D NTDS+SAERLRSYL AVESS ASTLLTSEEAT
Sbjct: 61  LSAASPSTSTGTATTFNVERLKLPPLDANTDSISAERLRSYLSAVESSFASTLLTSEEAT 120

Query: 121 IAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSLKTDTLHFKWAQFMESERA 180
           IAAAAAEAVTLAKAAVKVAKDAALLVNNSNSS+TG KSQSS K+D LHFKW QFMESERA
Sbjct: 121 IAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSKTGKKSQSSSKSDALHFKWDQFMESERA 180

Query: 181 DIIGESIGVNNRPVDGDALEHSTAESDYMEPTSEELELLQDELSKNIAVRSNRQTERKAR 240
           DIIG  +GVNNRP +GDAL+H TAESDY +PT+EELELLQDELS NIAVRS RQTER+A+
Sbjct: 181 DIIGVPVGVNNRPAEGDALQHDTAESDYTDPTTEELELLQDELS-NIAVRSRRQTERRAK 240

Query: 241 RTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE 300
           RTRAAEK A+SVVS+KSGSSSRKKRNS+QEVDYSDPLRYLRATTS SRLLTATEELELSE
Sbjct: 241 RTRAAEKIATSVVSVKSGSSSRKKRNSVQEVDYSDPLRYLRATTSNSRLLTATEELELSE 300

Query: 301 GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRL 360
           GIQDLLKLERLQEEL ERYG EPTFAQWAAAAGVNQRTLRKRLN+GTFCKDKMIKSNIRL
Sbjct: 301 GIQDLLKLERLQEELRERYGKEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRL 360

Query: 361 VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQ 420
           VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQ
Sbjct: 361 VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQ 420

Query: 421 SRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRS 480
           SRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRS
Sbjct: 421 SRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRS 480

Query: 481 LEQKIGINQNLKPSEVISDPEAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGME 540
           LEQKIGINQNLKPSEVISDPEAET+EDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGME
Sbjct: 481 LEQKIGINQNLKPSEVISDPEAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGME 540

Query: 541 DGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS 588
           DGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
Sbjct: 541 DGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS 586

[Close]

BLAST of Tan0008097 vs. NCBI nr
Match: XP_038875580.1 (RNA polymerase sigma factor sigB isoform X1 [Benincasa hispida])

HSP 1 Score: 1009.6 bits (2609), Expect = 1.1e-290
Identity = 541/588 (92.01%), Postives = 559/588 (95.07%), Query Frame = 0


Query: 1   MSCLLPQFKCHPETFSIQFKTTAITITTTANYS-HHHSFLPTANSTYTKVRDPHSLRTQC 60
           MSCLLPQFKCHPETFSIQFK       T ANY+ HHH+FLPTANS+YTKVRDPHSLRTQC
Sbjct: 1   MSCLLPQFKCHPETFSIQFK-------TAANYAPHHHTFLPTANSSYTKVRDPHSLRTQC 60

Query: 61  ILSAASPPTSTGTTTTFNVDRLKLPPFDTNTDSVSAERLRSYLGAVESSLASTLLTSEEA 120
           ILSAASPPTSTGT TT NVDRL LPPFDTNTDSVS ERLRSYLGAVESSLASTLLTSEEA
Sbjct: 61  ILSAASPPTSTGTATTLNVDRLMLPPFDTNTDSVSVERLRSYLGAVESSLASTLLTSEEA 120

Query: 121 TIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSLKTDTLHFKWAQFMESER 180
           TIAAAAAEAV LAKAAVKVA+DAALL NNSNSSR G KS+SS + D LHFKWAQFMESER
Sbjct: 121 TIAAAAAEAVALAKAAVKVARDAALLANNSNSSRAGEKSRSSPRPDALHFKWAQFMESER 180

Query: 181 ADIIGESIGVNNRPVDGDALEHSTAESDYMEPTSEELELLQDELSKNIAVRSNRQTERKA 240
           ADIIGE +GVNNRP++ DAL+ ST +SD MEPTSEELELLQDELS++I VRS RQTERKA
Sbjct: 181 ADIIGEPVGVNNRPMETDALQPSTTKSDDMEPTSEELELLQDELSESITVRSKRQTERKA 240

Query: 241 RRTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELS 300
           RRTRAAEKTA+SVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTA EELELS
Sbjct: 241 RRTRAAEKTATSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTAAEELELS 300

Query: 301 EGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIR 360
           EGIQDLLKLERLQEELA+RYGNEPTFAQWAAAAGVNQRTLRKRLN+GT CKDKMIKSNIR
Sbjct: 301 EGIQDLLKLERLQEELADRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIR 360

Query: 361 LVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSD 420
           LVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSD
Sbjct: 361 LVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSD 420

Query: 421 QSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPR 480
           QSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPR
Sbjct: 421 QSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPR 480

Query: 481 SLEQKIGINQNLKPSEVISDPEAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGM 540
           SLEQKIGINQNLKPSEVISDPEAETAED+LIKQFMKQDLEKVLDSLNPRERQVIRWRFGM
Sbjct: 481 SLEQKIGINQNLKPSEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGM 540

Query: 541 EDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS 588
           EDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYL+S
Sbjct: 541 EDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLIS 581

[Close]

BLAST of Tan0008097 vs. NCBI nr
Match: XP_008460092.1 (PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Cucumis melo])

HSP 1 Score: 1003.8 bits (2594), Expect = 6.0e-289
Identity = 537/587 (91.48%), Postives = 554/587 (94.38%), Query Frame = 0


Query: 1   MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHHSFLPTANSTYTKVRDPHSLRTQCI 60
           MSCLLPQFKCHPETFSIQFK       T AN SHHHSF+PTA S+YTKVRDPHSLRTQCI
Sbjct: 1   MSCLLPQFKCHPETFSIQFK-------TAANNSHHHSFIPTAYSSYTKVRDPHSLRTQCI 60

Query: 61  LSAASPPTSTGTTTTFNVDRLKLPPFDTNTDSVSAERLRSYLGAVESSLASTLLTSEEAT 120
           LSAASPPTSTGT TT NVDRLKLPPFDTNTDSVS ERLRSYLGAVESSLASTLLTSEEAT
Sbjct: 61  LSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSVERLRSYLGAVESSLASTLLTSEEAT 120

Query: 121 IAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSLKTDTLHFKWAQFMESERA 180
           IAAAAAEAVTLAKAAVKVA+DAALL NN NSSR GTKSQ S K D LHFKWAQFMESERA
Sbjct: 121 IAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQPSPKPDALHFKWAQFMESERA 180

Query: 181 DIIGESIGVNNRPVDGDALEHSTAESDYMEPTSEELELLQDELSKNIAVRSNRQTERKAR 240
           DIIGE +GVN RP++GDALE ST ESD +EPTS+ELELLQDELS++I V+S RQTERKAR
Sbjct: 181 DIIGEPVGVNKRPIEGDALEPSTTESDDVEPTSKELELLQDELSESITVKSKRQTERKAR 240

Query: 241 RTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE 300
           RTRAAEKT +SVV  KSGSSSRKKR+SLQEVDYSDPLRYLRATTSTSRLLTATEELELSE
Sbjct: 241 RTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE 300

Query: 301 GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRL 360
           GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLN+GT CKDKMIKSNIRL
Sbjct: 301 GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRL 360

Query: 361 VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQ 420
           VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRK LSDQ
Sbjct: 361 VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQ 420

Query: 421 SRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRS 480
           SRTIRLPFHMVEATYRVKEARKQL SENGRHPDD+EIAEAAGLSMKRLAAVLMTPKAPRS
Sbjct: 421 SRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRS 480

Query: 481 LEQKIGINQNLKPSEVISDPEAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGME 540
           LEQKIGINQNLKPSEVISDPEAETAED+LIKQFMKQDLEKVLDSLNPRE+QVIRWRFGME
Sbjct: 481 LEQKIGINQNLKPSEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGME 540

Query: 541 DGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS 588
           DGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
Sbjct: 541 DGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS 580

[Close]

BLAST of Tan0008097 vs. NCBI nr
Match: XP_004154029.1 (RNA polymerase sigma factor sigB [Cucumis sativus] >KGN46260.1 hypothetical protein Csa_004860 [Cucumis sativus])

HSP 1 Score: 1003.0 bits (2592), Expect = 1.0e-288
Identity = 535/587 (91.14%), Postives = 554/587 (94.38%), Query Frame = 0


Query: 1   MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHHSFLPTANSTYTKVRDPHSLRTQCI 60
           MSCLLPQFKCHPETFSIQFK       T ANYSHHHSFLPTA S+YTKVRDPHSLRTQCI
Sbjct: 1   MSCLLPQFKCHPETFSIQFK-------TAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCI 60

Query: 61  LSAASPPTSTGTTTTFNVDRLKLPPFDTNTDSVSAERLRSYLGAVESSLASTLLTSEEAT 120
           LSAASPPTSTGT TT +VDRLKLPPFDTNTDSVS ERLRSYLGAVESSLASTLLTSEEA+
Sbjct: 61  LSAASPPTSTGTATTLDVDRLKLPPFDTNTDSVSVERLRSYLGAVESSLASTLLTSEEAS 120

Query: 121 IAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSLKTDTLHFKWAQFMESERA 180
           IAAAAAEAVTLAKAAVKVA+DAALL NN NSSR GTKSQSS K D LHFKWAQFMESERA
Sbjct: 121 IAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQSSPKPDALHFKWAQFMESERA 180

Query: 181 DIIGESIGVNNRPVDGDALEHSTAESDYMEPTSEELELLQDELSKNIAVRSNRQTERKAR 240
           DIIGE +GVN RP++GDALE ST ESD MEPTSEELELLQDELS++I V+S RQTERKAR
Sbjct: 181 DIIGEPVGVNKRPMEGDALEPSTTESDDMEPTSEELELLQDELSESITVKSKRQTERKAR 240

Query: 241 RTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE 300
           RTRAAEKT +SV+S KSGSSSRKKRNS+QEVDYSDPLRYLRATT+TSRLLTATEELELSE
Sbjct: 241 RTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSE 300

Query: 301 GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRL 360
           GIQDLLKLERLQEEL ERYGNEPTFAQWAAAAGVNQRTLRKRLN+GT CKDKMIKSNIRL
Sbjct: 301 GIQDLLKLERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRL 360

Query: 361 VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQ 420
           VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRK LSDQ
Sbjct: 361 VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQ 420

Query: 421 SRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRS 480
           SRTIRLPFHMVEATYRVKEARKQL  ENGRHPDD+EIAEAAGLSMKRLAAVLMTPKAPRS
Sbjct: 421 SRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRS 480

Query: 481 LEQKIGINQNLKPSEVISDPEAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGME 540
           LEQKIGINQNLKPSEVISDPEAET ED+LIKQFMKQDLEKVLDSLNPRE+QVIRWRFGME
Sbjct: 481 LEQKIGINQNLKPSEVISDPEAETCEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGME 540

Query: 541 DGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS 588
           DGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY+MS
Sbjct: 541 DGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMS 580

[Close]

BLAST of Tan0008097 vs. NCBI nr
Match: XP_022964550.1 (RNA polymerase sigma factor sigB [Cucurbita moschata])

HSP 1 Score: 988.0 bits (2553), Expect = 3.4e-284
Identity = 528/586 (90.10%), Postives = 552/586 (94.20%), Query Frame = 0


Query: 1   MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHHSFLPTANSTYTKVRDPHSLRTQCI 60
           MSCLLPQFKCHPETFSIQFKT A TIT T   SHHH+FLPTANSTY K RDPHSLRTQCI
Sbjct: 98  MSCLLPQFKCHPETFSIQFKTPASTITPTPTSSHHHTFLPTANSTYFKFRDPHSLRTQCI 157

Query: 61  LSAASPPTSTGTTTTFNVDRLKLPPFDTNTDSVSAERLRSYLGAVESSLASTLLTSEEAT 120
           LSAASPPT TGT TTFNVDRLKLPPFDTNTDSVSAERLRSYLGAVESSLASTLLTSEEAT
Sbjct: 158 LSAASPPTLTGTATTFNVDRLKLPPFDTNTDSVSAERLRSYLGAVESSLASTLLTSEEAT 217

Query: 121 IAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSLKTDTLHFKWAQFMESERA 180
           IAAAAAEAV LAKAAVK A DAALLVNNSNSSR+ TKSQSS +++ LHFKW QFMESERA
Sbjct: 218 IAAAAAEAVALAKAAVKAANDAALLVNNSNSSRSVTKSQSSSRSNALHFKWDQFMESERA 277

Query: 181 DIIGESIGVNNRPVDGDALEHSTAESDYMEPTSEELELLQDELSKNIAVRSNRQTERKAR 240
           DIIGE +GVNNRPV+GDALE STAESD MEPTSEELELL+DE SK+IAVRS RQTERKAR
Sbjct: 278 DIIGEPVGVNNRPVEGDALEPSTAESDDMEPTSEELELLEDEFSKSIAVRSIRQTERKAR 337

Query: 241 RTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE 300
           RTRA+EK A+SVVSLKSGSSSRKKRNS QEVDY+DPLRYLRATTS S+LLTA++ELELSE
Sbjct: 338 RTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASKLLTASDELELSE 397

Query: 301 GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRL 360
           GIQDLLKLERL+EELA RYGNEPTFAQWAAAAGVNQRTLRKRLN+GTFCKDKMIKSNIRL
Sbjct: 398 GIQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRL 457

Query: 361 VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQ 420
           VISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQ
Sbjct: 458 VISIAKNYQGGGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQ 517

Query: 421 SRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRS 480
           SRTIRLPFHMVEATY+VKEARKQLY+ NGR P+DEEIA AAGLSMKRLA VLMTPKAPRS
Sbjct: 518 SRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTPKAPRS 577

Query: 481 LEQKIGINQNLKPSEVISDPEAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGME 540
           LEQK GINQNLKPSEVISDPEA TAEDLLIKQFMKQ+LEKVLDSLNPRERQ+IRWR+GME
Sbjct: 578 LEQKFGINQNLKPSEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGME 637

Query: 541 DGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLM 587
           DGRMKTLQEIGE+MGVSRERIRQIE CAFRKLKNKKRTKHLQQYLM
Sbjct: 638 DGRMKTLQEIGEMMGVSRERIRQIELCAFRKLKNKKRTKHLQQYLM 683

[Close]

BLAST of Tan0008097 vs. ExPASy TrEMBL
Match: A0A6J1DSR7 (RNA polymerase sigma factor OS=Momordica charantia OX=3673 GN=LOC111022820 PE=3 SV=1)

HSP 1 Score: 1028.9 bits (2659), Expect = 8.5e-297
Identity = 546/587 (93.02%), Postives = 565/587 (96.25%), Query Frame = 0


Query: 1   MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHHSFLPTANSTYTKVRDPHSLRTQCI 60
           MSCLLPQFKCHPETFSIQFKTTAIT+TTTANYSHHH+FLPTANS+ TKVRDPHSLRTQCI
Sbjct: 1   MSCLLPQFKCHPETFSIQFKTTAITVTTTANYSHHHNFLPTANSSCTKVRDPHSLRTQCI 60

Query: 61  LSAASPPTSTGTTTTFNVDRLKLPPFDTNTDSVSAERLRSYLGAVESSLASTLLTSEEAT 120
           LSAASP TSTGT TTFNV+RLKLPP D NTDS+SAERLRSYL AVESS ASTLLTSEEAT
Sbjct: 61  LSAASPSTSTGTATTFNVERLKLPPLDANTDSISAERLRSYLSAVESSFASTLLTSEEAT 120

Query: 121 IAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSLKTDTLHFKWAQFMESERA 180
           IAAAAAEAVTLAKAAVKVAKDAALLVNNSNSS+TG KSQSS K+D LHFKW QFMESERA
Sbjct: 121 IAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSKTGKKSQSSSKSDALHFKWDQFMESERA 180

Query: 181 DIIGESIGVNNRPVDGDALEHSTAESDYMEPTSEELELLQDELSKNIAVRSNRQTERKAR 240
           DIIG  +GVNNRP +GDAL+H TAESDY +PT+EELELLQDELS NIAVRS RQTER+A+
Sbjct: 181 DIIGVPVGVNNRPAEGDALQHDTAESDYTDPTTEELELLQDELS-NIAVRSRRQTERRAK 240

Query: 241 RTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE 300
           RTRAAEK A+SVVS+KSGSSSRKKRNS+QEVDYSDPLRYLRATTS SRLLTATEELELSE
Sbjct: 241 RTRAAEKIATSVVSVKSGSSSRKKRNSVQEVDYSDPLRYLRATTSNSRLLTATEELELSE 300

Query: 301 GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRL 360
           GIQDLLKLERLQEEL ERYG EPTFAQWAAAAGVNQRTLRKRLN+GTFCKDKMIKSNIRL
Sbjct: 301 GIQDLLKLERLQEELRERYGKEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRL 360

Query: 361 VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQ 420
           VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQ
Sbjct: 361 VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQ 420

Query: 421 SRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRS 480
           SRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRS
Sbjct: 421 SRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRS 480

Query: 481 LEQKIGINQNLKPSEVISDPEAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGME 540
           LEQKIGINQNLKPSEVISDPEAET+EDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGME
Sbjct: 481 LEQKIGINQNLKPSEVISDPEAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGME 540

Query: 541 DGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS 588
           DGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
Sbjct: 541 DGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS 586

[Close]

BLAST of Tan0008097 vs. ExPASy TrEMBL
Match: A0A1S3CD00 (RNA polymerase sigma factor OS=Cucumis melo OX=3656 GN=LOC103499006 PE=3 SV=1)

HSP 1 Score: 1003.8 bits (2594), Expect = 2.9e-289
Identity = 537/587 (91.48%), Postives = 554/587 (94.38%), Query Frame = 0


Query: 1   MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHHSFLPTANSTYTKVRDPHSLRTQCI 60
           MSCLLPQFKCHPETFSIQFK       T AN SHHHSF+PTA S+YTKVRDPHSLRTQCI
Sbjct: 1   MSCLLPQFKCHPETFSIQFK-------TAANNSHHHSFIPTAYSSYTKVRDPHSLRTQCI 60

Query: 61  LSAASPPTSTGTTTTFNVDRLKLPPFDTNTDSVSAERLRSYLGAVESSLASTLLTSEEAT 120
           LSAASPPTSTGT TT NVDRLKLPPFDTNTDSVS ERLRSYLGAVESSLASTLLTSEEAT
Sbjct: 61  LSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSVERLRSYLGAVESSLASTLLTSEEAT 120

Query: 121 IAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSLKTDTLHFKWAQFMESERA 180
           IAAAAAEAVTLAKAAVKVA+DAALL NN NSSR GTKSQ S K D LHFKWAQFMESERA
Sbjct: 121 IAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQPSPKPDALHFKWAQFMESERA 180

Query: 181 DIIGESIGVNNRPVDGDALEHSTAESDYMEPTSEELELLQDELSKNIAVRSNRQTERKAR 240
           DIIGE +GVN RP++GDALE ST ESD +EPTS+ELELLQDELS++I V+S RQTERKAR
Sbjct: 181 DIIGEPVGVNKRPIEGDALEPSTTESDDVEPTSKELELLQDELSESITVKSKRQTERKAR 240

Query: 241 RTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE 300
           RTRAAEKT +SVV  KSGSSSRKKR+SLQEVDYSDPLRYLRATTSTSRLLTATEELELSE
Sbjct: 241 RTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE 300

Query: 301 GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRL 360
           GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLN+GT CKDKMIKSNIRL
Sbjct: 301 GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRL 360

Query: 361 VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQ 420
           VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRK LSDQ
Sbjct: 361 VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQ 420

Query: 421 SRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRS 480
           SRTIRLPFHMVEATYRVKEARKQL SENGRHPDD+EIAEAAGLSMKRLAAVLMTPKAPRS
Sbjct: 421 SRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRS 480

Query: 481 LEQKIGINQNLKPSEVISDPEAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGME 540
           LEQKIGINQNLKPSEVISDPEAETAED+LIKQFMKQDLEKVLDSLNPRE+QVIRWRFGME
Sbjct: 481 LEQKIGINQNLKPSEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGME 540

Query: 541 DGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS 588
           DGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
Sbjct: 541 DGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS 580

[Close]

BLAST of Tan0008097 vs. ExPASy TrEMBL
Match: A0A0A0K917 (RNA polymerase sigma factor OS=Cucumis sativus OX=3659 GN=Csa_6G078550 PE=3 SV=1)

HSP 1 Score: 1003.0 bits (2592), Expect = 5.0e-289
Identity = 535/587 (91.14%), Postives = 554/587 (94.38%), Query Frame = 0


Query: 1   MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHHSFLPTANSTYTKVRDPHSLRTQCI 60
           MSCLLPQFKCHPETFSIQFK       T ANYSHHHSFLPTA S+YTKVRDPHSLRTQCI
Sbjct: 1   MSCLLPQFKCHPETFSIQFK-------TAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCI 60

Query: 61  LSAASPPTSTGTTTTFNVDRLKLPPFDTNTDSVSAERLRSYLGAVESSLASTLLTSEEAT 120
           LSAASPPTSTGT TT +VDRLKLPPFDTNTDSVS ERLRSYLGAVESSLASTLLTSEEA+
Sbjct: 61  LSAASPPTSTGTATTLDVDRLKLPPFDTNTDSVSVERLRSYLGAVESSLASTLLTSEEAS 120

Query: 121 IAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSLKTDTLHFKWAQFMESERA 180
           IAAAAAEAVTLAKAAVKVA+DAALL NN NSSR GTKSQSS K D LHFKWAQFMESERA
Sbjct: 121 IAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQSSPKPDALHFKWAQFMESERA 180

Query: 181 DIIGESIGVNNRPVDGDALEHSTAESDYMEPTSEELELLQDELSKNIAVRSNRQTERKAR 240
           DIIGE +GVN RP++GDALE ST ESD MEPTSEELELLQDELS++I V+S RQTERKAR
Sbjct: 181 DIIGEPVGVNKRPMEGDALEPSTTESDDMEPTSEELELLQDELSESITVKSKRQTERKAR 240

Query: 241 RTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE 300
           RTRAAEKT +SV+S KSGSSSRKKRNS+QEVDYSDPLRYLRATT+TSRLLTATEELELSE
Sbjct: 241 RTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSE 300

Query: 301 GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRL 360
           GIQDLLKLERLQEEL ERYGNEPTFAQWAAAAGVNQRTLRKRLN+GT CKDKMIKSNIRL
Sbjct: 301 GIQDLLKLERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRL 360

Query: 361 VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQ 420
           VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRK LSDQ
Sbjct: 361 VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQ 420

Query: 421 SRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRS 480
           SRTIRLPFHMVEATYRVKEARKQL  ENGRHPDD+EIAEAAGLSMKRLAAVLMTPKAPRS
Sbjct: 421 SRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRS 480

Query: 481 LEQKIGINQNLKPSEVISDPEAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGME 540
           LEQKIGINQNLKPSEVISDPEAET ED+LIKQFMKQDLEKVLDSLNPRE+QVIRWRFGME
Sbjct: 481 LEQKIGINQNLKPSEVISDPEAETCEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGME 540

Query: 541 DGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS 588
           DGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY+MS
Sbjct: 541 DGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMS 580

[Close]

BLAST of Tan0008097 vs. ExPASy TrEMBL
Match: A0A6J1HL45 (RNA polymerase sigma factor sigB OS=Cucurbita moschata OX=3662 GN=LOC111464542 PE=3 SV=1)

HSP 1 Score: 988.0 bits (2553), Expect = 1.7e-284
Identity = 528/586 (90.10%), Postives = 552/586 (94.20%), Query Frame = 0


Query: 1   MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHHSFLPTANSTYTKVRDPHSLRTQCI 60
           MSCLLPQFKCHPETFSIQFKT A TIT T   SHHH+FLPTANSTY K RDPHSLRTQCI
Sbjct: 98  MSCLLPQFKCHPETFSIQFKTPASTITPTPTSSHHHTFLPTANSTYFKFRDPHSLRTQCI 157

Query: 61  LSAASPPTSTGTTTTFNVDRLKLPPFDTNTDSVSAERLRSYLGAVESSLASTLLTSEEAT 120
           LSAASPPT TGT TTFNVDRLKLPPFDTNTDSVSAERLRSYLGAVESSLASTLLTSEEAT
Sbjct: 158 LSAASPPTLTGTATTFNVDRLKLPPFDTNTDSVSAERLRSYLGAVESSLASTLLTSEEAT 217

Query: 121 IAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSLKTDTLHFKWAQFMESERA 180
           IAAAAAEAV LAKAAVK A DAALLVNNSNSSR+ TKSQSS +++ LHFKW QFMESERA
Sbjct: 218 IAAAAAEAVALAKAAVKAANDAALLVNNSNSSRSVTKSQSSSRSNALHFKWDQFMESERA 277

Query: 181 DIIGESIGVNNRPVDGDALEHSTAESDYMEPTSEELELLQDELSKNIAVRSNRQTERKAR 240
           DIIGE +GVNNRPV+GDALE STAESD MEPTSEELELL+DE SK+IAVRS RQTERKAR
Sbjct: 278 DIIGEPVGVNNRPVEGDALEPSTAESDDMEPTSEELELLEDEFSKSIAVRSIRQTERKAR 337

Query: 241 RTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE 300
           RTRA+EK A+SVVSLKSGSSSRKKRNS QEVDY+DPLRYLRATTS S+LLTA++ELELSE
Sbjct: 338 RTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASKLLTASDELELSE 397

Query: 301 GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRL 360
           GIQDLLKLERL+EELA RYGNEPTFAQWAAAAGVNQRTLRKRLN+GTFCKDKMIKSNIRL
Sbjct: 398 GIQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRL 457

Query: 361 VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQ 420
           VISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQ
Sbjct: 458 VISIAKNYQGGGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQ 517

Query: 421 SRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRS 480
           SRTIRLPFHMVEATY+VKEARKQLY+ NGR P+DEEIA AAGLSMKRLA VLMTPKAPRS
Sbjct: 518 SRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTPKAPRS 577

Query: 481 LEQKIGINQNLKPSEVISDPEAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGME 540
           LEQK GINQNLKPSEVISDPEA TAEDLLIKQFMKQ+LEKVLDSLNPRERQ+IRWR+GME
Sbjct: 578 LEQKFGINQNLKPSEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGME 637

Query: 541 DGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLM 587
           DGRMKTLQEIGE+MGVSRERIRQIE CAFRKLKNKKRTKHLQQYLM
Sbjct: 638 DGRMKTLQEIGEMMGVSRERIRQIELCAFRKLKNKKRTKHLQQYLM 683

[Close]

BLAST of Tan0008097 vs. ExPASy TrEMBL
Match: A0A6J1KM29 (RNA polymerase sigma factor OS=Cucurbita maxima OX=3661 GN=LOC111494519 PE=3 SV=1)

HSP 1 Score: 986.1 bits (2548), Expect = 6.3e-284
Identity = 530/586 (90.44%), Postives = 552/586 (94.20%), Query Frame = 0


Query: 1   MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHHSFLPTANSTYTKVRDPHSLRTQCI 60
           MSCLLPQFKCHPETFSIQFKT AITIT T   SHHH+FLPTANSTY KVRDPHSLRTQCI
Sbjct: 1   MSCLLPQFKCHPETFSIQFKTPAITITPTPTSSHHHTFLPTANSTYFKVRDPHSLRTQCI 60

Query: 61  LSAASPPTSTGTTTTFNVDRLKLPPFDTNTDSVSAERLRSYLGAVESSLASTLLTSEEAT 120
           LSAA   TSTGT TTFNVDRLKLPPFDTNTDSVSAERLRSYLGAVESSLASTLLTSEEAT
Sbjct: 61  LSAA---TSTGTATTFNVDRLKLPPFDTNTDSVSAERLRSYLGAVESSLASTLLTSEEAT 120

Query: 121 IAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSLKTDTLHFKWAQFMESERA 180
           IAAAAAEAV LAKAAVK A DAALLVNNSNS+R+ TKSQSS K++ LHFKW QFMESERA
Sbjct: 121 IAAAAAEAVALAKAAVKAANDAALLVNNSNSARSVTKSQSSSKSNALHFKWDQFMESERA 180

Query: 181 DIIGESIGVNNRPVDGDALEHSTAESDYMEPTSEELELLQDELSKNIAVRSNRQTERKAR 240
           DIIGE +GVNNRPV+GDALE STAESD MEPTSEELELLQDE SK+IAVRSNRQTERKAR
Sbjct: 181 DIIGEPVGVNNRPVEGDALEPSTAESDDMEPTSEELELLQDEFSKSIAVRSNRQTERKAR 240

Query: 241 RTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE 300
           RTRA+EK A+SVVSLKSGSSSRKKRNS QEVDY+DPLRYLRATTS S+LLTA++ELELSE
Sbjct: 241 RTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASKLLTASDELELSE 300

Query: 301 GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRL 360
           GIQDLLKLERL+EELA RYGNEPTFAQWAAAAGVNQRTLRKRLN+GTFCKDKMIKSNIRL
Sbjct: 301 GIQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRL 360

Query: 361 VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQ 420
           VISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQ
Sbjct: 361 VISIAKNYQGGGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQ 420

Query: 421 SRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRS 480
           SRTIRLPFHMVEATY+VKEARKQLY+ NGR P DEEIA AAGLSMKRLA VLMTPKAPRS
Sbjct: 421 SRTIRLPFHMVEATYKVKEARKQLYTANGRLPADEEIAVAAGLSMKRLATVLMTPKAPRS 480

Query: 481 LEQKIGINQNLKPSEVISDPEAETAEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGME 540
           LEQK GINQNLKPSEVISDPEA TAEDLLIKQFMKQ+LEKVLDSLNPRERQ+IRWR+GME
Sbjct: 481 LEQKFGINQNLKPSEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGME 540

Query: 541 DGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLM 587
           DGRMKTLQEIGE+MGVSRERIRQIE CAFRKLKNKKRTKHLQQYLM
Sbjct: 541 DGRMKTLQEIGEMMGVSRERIRQIELCAFRKLKNKKRTKHLQQYLM 583

[Close]

BLAST of Tan0008097 vs. TAIR 10
Match: AT1G08540.1 (RNApolymerase sigma subunit 2 )

HSP 1 Score: 661.4 bits (1705), Expect = 6.9e-190
Identity = 380/599 (63.44%), Postives = 456/599 (76.13%), Query Frame = 0


Query: 2   SCLLPQFKCHPETFSIQFKTTAITITTTANYSHHHSFLPTANSTYTKVRDPHSLRTQCIL 61
           SCLLPQFKC P++FSI F+T               SF    ++  +    P     QC +
Sbjct: 3   SCLLPQFKCPPDSFSIHFRT---------------SFCAPKHNKGSVFFQP-----QCAV 62

Query: 62  SAASPPTSTGTTTTFNVDRLKLPPFDTNTDSVSAERLRSYLGA---------VESSLAST 121
           S  SP      T+  +V +L+LP FDT++DS+ ++R  +Y            +E+  + T
Sbjct: 63  S-TSPAL---LTSMLDVAKLRLPSFDTDSDSLISDRQWTYTRPDGPSTEAKYLEALASET 122

Query: 122 LLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSLKTDTLHFKWA 181
           LLTS+EA + AAAAEAV LA+AAVKVAKDA L   NSN++   T S +  ++     KW 
Sbjct: 123 LLTSDEAVVVAAAAEAVALARAAVKVAKDATLF-KNSNNTNLLTSSTADKRS-----KWD 182

Query: 182 QFMESERADIIGESIGVNNRPVDGDALEHSTAE----SDYMEPTSEELELLQDELSKNIA 241
           QF E ERA I+G  + V++  +  D +  S +      D      EE+ELL+++ S ++A
Sbjct: 183 QFTEKERAGILGH-LAVSDNGIVSDKITASASNKESIGDLESEKQEEVELLEEQPSVSLA 242

Query: 242 VRSNRQTERKARRTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSR 301
           VRS RQTERKARR +  EKTAS + S+K+GSS +KKR   QEVD++DPLRYLR TTS+S+
Sbjct: 243 VRSTRQTERKARRAKGLEKTASGIPSVKTGSSPKKKRLVAQEVDHNDPLRYLRMTTSSSK 302

Query: 302 LLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTF 361
           LLT  EE ELS GIQDLLKLERLQ EL ER G +PTFAQWA+AAGV+Q++LR+R++HGT 
Sbjct: 303 LLTVREEHELSAGIQDLLKLERLQTELTERSGRQPTFAQWASAAGVDQKSLRQRIHHGTL 362

Query: 362 CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWW 421
           CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWW
Sbjct: 363 CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWW 422

Query: 422 IKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRL 481
           IKQAVRKSLSDQSR IRLPFHMVEATYRVKEARKQLYSE G+HP +EEIAEA GLSMKRL
Sbjct: 423 IKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYSETGKHPKNEEIAEATGLSMKRL 482

Query: 482 AAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAEDLLIKQFMKQDLEKVLDSLNPR 541
            AVL++PK PRSL+QKIG+NQNLKPSEVI+DPEA T+ED+LIK+FM+QDL+KVLDSL  R
Sbjct: 483 MAVLLSPKPPRSLDQKIGMNQNLKPSEVIADPEAVTSEDILIKEFMRQDLDKVLDSLGTR 542

Query: 542 ERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS 588
           E+QVIRWRFGMEDGRMKTLQEIGE+MGVSRER+RQIES AFRKLKNKKR  HLQQYL++
Sbjct: 543 EKQVIRWRFGMEDGRMKTLQEIGEMMGVSRERVRQIESSAFRKLKNKKRNNHLQQYLVA 570

[Close]

BLAST of Tan0008097 vs. TAIR 10
Match: AT2G36990.1 (RNApolymerase sigma-subunit F )

HSP 1 Score: 247.3 bits (630), Expect = 3.1e-65
Identity = 143/360 (39.72%), Postives = 213/360 (59.17%), Query Frame = 0


Query: 225 KNIAVRSNRQTERKARRTRAAEKTASSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATT 284
           K   VRS RQ ER+A+  RA +             +S KK+   Q  D  D L+      
Sbjct: 184 KGNIVRSKRQLERRAKNRRAPKSNDVDDEGYVPQKTSAKKKYK-QGADNDDALQLFLWGP 243

Query: 285 STSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLN 344
            T +LLTA EE EL   IQ LLKLE+++ +L  + G EPT  +WA A G++   L+  ++
Sbjct: 244 ETKQLLTAKEEAELISHIQHLLKLEKVKTKLESQNGCEPTIGEWAEAMGISSPVLKSDIH 303

Query: 345 HGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTY 404
            G   ++K+I +N+RLV+ IAK YQ  G+N QDL+QEG  GL++  EKF    G +F+TY
Sbjct: 304 RGRSSREKLITANLRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFATY 363

Query: 405 AHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLS 464
           A+WWI+Q++RKS+   SRTIRLP ++     +V EARK    E    P  EE+A   G+S
Sbjct: 364 AYWWIRQSIRKSIFQNSRTIRLPENVYMLLGKVSEARKTCVQEGNYRPSKEELAGHVGVS 423

Query: 465 MKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAEDLLIKQFMKQDLEKVLDS 524
            ++L  +L   + P S++Q I  +Q+    E+  D   ET    + KQ M+  +  +L+ 
Sbjct: 424 TEKLDKLLYNTRTPLSMQQPIWSDQDTTFQEITPDSGIETPTMSVGKQLMRNHVRNLLNV 483

Query: 525 LNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY 584
           L+P+ER++I+ RFG++ G+ ++L EIGEI G+S+ER+RQ+ES A  +LK    +  L  Y
Sbjct: 484 LSPKERRIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRALYRLKQNMNSHGLHAY 542

[Close]

BLAST of Tan0008097 vs. TAIR 10
Match: AT3G53920.1 (RNApolymerase sigma-subunit C )

HSP 1 Score: 208.8 bits (530), Expect = 1.2e-53
Identity = 124/374 (33.16%), Postives = 226/374 (60.43%), Query Frame = 0


Query: 213 SEELELLQDELSKNIAVRSNRQTERKARRTRAAEKTASSVVSLKSGSSSRKKRNSLQEVD 272
           S+  EL+    ++ + V S R+ ++KARR+    +      SL  G   R   N++    
Sbjct: 204 SDTTELVDTTPNQQVFVSSRRKVKKKARRSSVTAENGDQ-SSLPIG--LRTTWNNIDVPR 263

Query: 273 YSDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAA 332
              P +Y +     SR      E E+S G++ +  +ER++ +L E  G   + + WAAAA
Sbjct: 264 VRRPPKYRKKRERISR-----NETEMSTGVKIVADMERIRTQLEEESGKVASLSCWAAAA 323

Query: 333 GVNQRTLRKRLNHGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEK 392
           G+N++ L + L++G +C+D+++KS   LV+ +A+NY+G G+  +DL+Q G  G+++GAE+
Sbjct: 324 GMNEKLLMRNLHYGWYCRDELVKSTRSLVLFLARNYRGLGIAHEDLIQAGYVGVLQGAER 383

Query: 393 FDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENG-RH 452
           FD ++G+KFSTY  +WI++++   +S  +R + +P  ++     +++ARK L + +G ++
Sbjct: 384 FDHTRGYKFSTYVQYWIRKSMSTMVSRHARGVHIPSSIIRTINHIQKARKTLKTSHGIKY 443

Query: 453 PDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAEDLLIK 512
             DEEIA+  G S+K++ A     K   S+++K+G     K  E   D   E+ E+ +++
Sbjct: 444 AADEEIAKLTGHSVKKIRAANQCLKVVGSIDKKVGDCFTTKFLEFTPDTTMESPEEAVMR 503

Query: 513 QFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRK 572
           Q  ++D+  +L+ L PRE+QV+  R+G++D R K+L+EIG+++ VS+E IR+IE  A  K
Sbjct: 504 QSARRDIHDLLEGLEPREKQVMVLRYGLQDYRPKSLEEIGKLLKVSKEWIRKIERRAMAK 563

Query: 573 LKNKKRTKHLQQYL 586
           L+++   + L+ YL
Sbjct: 564 LRDQPNAEDLRYYL 569

[Close]

BLAST of Tan0008097 vs. TAIR 10
Match: AT5G13730.1 (sigma factor 4 )

HSP 1 Score: 186.0 bits (471), Expect = 8.4e-47
Identity = 109/303 (35.97%), Postives = 175/303 (57.76%), Query Frame = 0


Query: 285 STSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLN 344
           S S  L+  EE++L   +++  KLE L   + E   NE      A+  G  +R+  + L 
Sbjct: 118 SRSGFLSRLEEVQLCLYLKEGAKLENLGTSVEE---NEMVSVLLASGRGKKKRSANEILC 177

Query: 345 HGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTY 404
                ++K+ +   RLV+SIA  YQG G+NLQDL+QEG  GL+RGAE+FD  +G+K STY
Sbjct: 178 RRKEAREKITRCYRRLVVSIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPDRGYKLSTY 237

Query: 405 AHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLS 464
            +WWIKQA+ ++++ +SR ++LP  M E T +V EA   L  +  R P  EEIAE   L+
Sbjct: 238 VYWWIKQAILRAIAHKSRLVKLPGSMWELTAKVAEASNVLTRKLRRQPSCEEIAEHLNLN 297

Query: 465 MKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAEDLLIKQFMKQDLEKVLDS 524
           +  +   +   ++P SL++    N  +   E++  P+    E+++ ++ MK ++E++L S
Sbjct: 298 VSAVRLAVERSRSPVSLDRVASQNGRMTLQEIVRGPDETRPEEMVKREHMKHEIEQLLGS 357

Query: 525 LNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY 584
           L  RE +V+   FG+      + +EIG+ + +SRER+RQI   A +KL+N      L+ Y
Sbjct: 358 LTARESRVLGLYFGLNGETPMSFEEIGKSLKLSRERVRQINGIALKKLRNVHNVNDLKIY 417

Query: 585 LMS 588
             S
Sbjct: 418 YSS 417

[Close]

BLAST of Tan0008097 vs. TAIR 10
Match: AT1G64860.1 (sigma factor A )

HSP 1 Score: 154.8 bits (390), Expect = 2.1e-37
Identity = 127/415 (30.60%), Postives = 216/415 (52.05%), Query Frame = 0


Query: 195 DGDALEHSTAESDYMEPTSEELELLQD-------ELSKNIAVRSNRQTERKARRTRAAEK 254
           D +  E    + D +  + E + LLQ         LS   AV S    +   R+ +    
Sbjct: 93  DKELEEECYDDDDLISHSVEAILLLQKSMLEKSWNLSFEKAVSSEYPGKGTIRKKKIPVI 152

Query: 255 TASSVVSLKSGSSSRKKRN-----SLQEVDYSDPLR-YLRATTSTSRLLTATEELELSEG 314
           T S + + +    ++KK N     ++ +V     +R Y++   S   +L+  E + LS+ 
Sbjct: 153 TCSGISARQRRIGAKKKTNMTHVKAVSDVSSGKQVRGYVKGVISED-VLSHVEVVRLSKK 212

Query: 315 IQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNHGTFCKDKMIKSNIRLV 374
           I+  L+L+  +  L +R G EP+  Q A +  +++  L+  L      ++K+  SN+RLV
Sbjct: 213 IKSGLRLDDHKSRLKDRLGCEPSDEQLAVSLKISRAELQAWLMECHLAREKLAMSNVRLV 272

Query: 375 ISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQS 434
           +SIA+ Y   G  + DLVQ G  GL+RG EKFD+SKGF+ STY +WWI+Q V ++L D S
Sbjct: 273 MSIAQRYDNLGAEMSDLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVDNS 332

Query: 435 RTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSL 494
           RT+RLP H+ E    ++ A+ +L  E G  P  + IAE+  +S K++           SL
Sbjct: 333 RTLRLPTHLHERLGLIRNAKLRL-QEKGITPSIDRIAESLNMSQKKVRNATEAVSKVFSL 392

Query: 495 EQKIGINQNLKPSEV----ISDPEAET-----AEDLLIKQFMKQDLEKVLD-SLNPRERQ 554
           ++    + N  P E     I+D   E       +DL     +K+++ K++  +L  RE++
Sbjct: 393 DRDAFPSLNGLPGETHHSYIADTRLENNPWHGYDDLA----LKEEVSKLISATLGEREKE 452

Query: 555 VIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLM 587
           +IR  +G+ D    T ++I + +G+SRER+RQ+   A  KLK+  R + ++  ++
Sbjct: 453 IIRLYYGL-DKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKRKMEAMIL 500

The following BLAST results are available for this feature:

BLAST of Tan0008097 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22056	9.7e-189	63.44	RNA polymerase sigma factor sigB OS=Arabidopsis thaliana OX=3702 GN=SIGB PE=2 SV...	[more]
P26683	1.7e-76	46.39	RNA polymerase sigma factor SigA OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UT...	[more]
P38023	4.6e-74	45.71	RNA polymerase sigma factor SigA1 OS=Synechococcus elongatus (strain PCC 7942 / ...	[more]
P52322	3.8e-68	40.71	RNA polymerase sigma factor SigA OS=Microcystis aeruginosa OX=1126 GN=sigA PE=3 ...	[more]
P74565	6.7e-65	39.24	RNA polymerase sigma factor SigA OS=Synechocystis sp. (strain PCC 6803 / Kazusa)...	[more]

BLAST of Tan0008097 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155781.1	1.8e-296	93.02	RNA polymerase sigma factor sigB [Momordica charantia]	[more]
XP_038875580.1	1.1e-290	92.01	RNA polymerase sigma factor sigB isoform X1 [Benincasa hispida]	[more]
XP_008460092.1	6.0e-289	91.48	PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Cucumis melo]	[more]
XP_004154029.1	1.0e-288	91.14	RNA polymerase sigma factor sigB [Cucumis sativus] >KGN46260.1 hypothetical prot...	[more]
XP_022964550.1	3.4e-284	90.10	RNA polymerase sigma factor sigB [Cucurbita moschata]	[more]

BLAST of Tan0008097 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DSR7	8.5e-297	93.02	RNA polymerase sigma factor OS=Momordica charantia OX=3673 GN=LOC111022820 PE=3 ...	[more]
A0A1S3CD00	2.9e-289	91.48	RNA polymerase sigma factor OS=Cucumis melo OX=3656 GN=LOC103499006 PE=3 SV=1	[more]
A0A0A0K917	5.0e-289	91.14	RNA polymerase sigma factor OS=Cucumis sativus OX=3659 GN=Csa_6G078550 PE=3 SV=1	[more]
A0A6J1HL45	1.7e-284	90.10	RNA polymerase sigma factor sigB OS=Cucurbita moschata OX=3662 GN=LOC111464542 P...	[more]
A0A6J1KM29	6.3e-284	90.44	RNA polymerase sigma factor OS=Cucurbita maxima OX=3661 GN=LOC111494519 PE=3 SV=...	[more]

BLAST of Tan0008097 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08540.1	6.9e-190	63.44	RNApolymerase sigma subunit 2	[more]
AT2G36990.1	3.1e-65	39.72	RNApolymerase sigma-subunit F	[more]
AT3G53920.1	1.2e-53	33.16	RNApolymerase sigma-subunit C	[more]
AT5G13730.1	8.4e-47	35.97	sigma factor 4	[more]
AT1G64860.1	2.1e-37	30.60	sigma factor A	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000943	RNA polymerase sigma-70	PRINTS	PR00046	SIGMA70FCT	coord: 561..572 score: 59.57 coord: 546..561 score: 54.92 coord: 401..409 score: 82.44 coord: 377..390 score: 52.4 coord: 525..537 score: 50.02
IPR000943	RNA polymerase sigma-70	PROSITE	PS00716	SIGMA70_2	coord: 546..572
IPR007630	RNA polymerase sigma-70 region 4	PFAM	PF04545	Sigma70_r4	coord: 521..573 e-value: 1.5E-20 score: 72.4
IPR014284	RNA polymerase sigma-70 like domain	TIGRFAM	TIGR02937	TIGR02937	coord: 351..575 e-value: 1.3E-32 score: 110.7
IPR007627	RNA polymerase sigma-70 region 2	PFAM	PF04542	Sigma70_r2	coord: 353..422 e-value: 1.6E-18 score: 66.3
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 426..503 e-value: 1.1E-14 score: 56.6
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 509..587 e-value: 1.9E-28 score: 100.0
None	No IPR available	GENE3D	1.10.601.10	RNA Polymerase Primary Sigma Factor	coord: 107..425 e-value: 1.4E-38 score: 135.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 231..245
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 231..268
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 247..262
None	No IPR available	PANTHER	PTHR30603	RNA POLYMERASE SIGMA FACTOR RPO	coord: 46..586
None	No IPR available	PANTHER	PTHR30603:SF57	RNA POLYMERASE SIGMA FACTOR SIGB	coord: 46..586
None	No IPR available	CDD	cd06171	Sigma70_r4	coord: 515..573 e-value: 1.86178E-14 score: 65.9738
IPR009042	RNA polymerase sigma-70 region 1.2	PFAM	PF00140	Sigma70_r1_2	coord: 275..307 e-value: 7.9E-5 score: 22.6
IPR007624	RNA polymerase sigma-70 region 3	PFAM	PF04539	Sigma70_r3	coord: 432..507 e-value: 7.5E-17 score: 61.2
IPR016262	RNA polymerase sigma factor, SigB/C/D/F, plastid	PIRSF	PIRSF000767	Sigma_factor_SigC	coord: 1..587 e-value: 3.5E-189 score: 628.3
IPR013324	RNA polymerase sigma factor, region 3/4-like	SUPERFAMILY	88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors	coord: 485..584
IPR013324	RNA polymerase sigma factor, region 3/4-like	SUPERFAMILY	88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors	coord: 421..472
IPR013325	RNA polymerase sigma factor, region 2	SUPERFAMILY	88946	Sigma2 domain of RNA polymerase sigma factors	coord: 274..423

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0008097.1	Tan0008097.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006352	DNA-templated transcription, initiation
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0016987	sigma factor activity
molecular_function	GO:0003700	DNA-binding transcription factor activity