Tan0008084 (gene) Snake gourd v1

Overview


Name	Tan0008084
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	photosystem II 5 kDa protein, chloroplastic
Location	LG07: 12130932 .. 12131593 (-)
RNA-Seq Expression	Tan0008084
Synteny	Tan0008084

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGATGTTTCATTGAAGAATCAACATGAACCCCTTGAATGAATTGGGCACAATCCAAAACAATAAACTATATCCTCTTTCCCCTCACCCACTTACTACTGTCAACTATCTCTCCATCTCTTACAAACACACATTCCCTAAAAATGGCATCCATGGCTATGACAGCCTCCTTCCTCCCTGTCACGGCCAAGCACCCCTCCGCCTCCACTCGAAGAGCCCTCGTCGTCGTCAAGGCCTCCGTCGATGGCTCGAATACCAACTTGGATATCAAGAATGTGAAGGTTGAGAGCAGGCAAGGGCGAAGGGAGTTGGTGGCAGCCGCCGTGACAGTGGCAGCGGCGAGCTTGGCAAAGGTTGCAATGGCGGACGAGCCTAAGCCTGGCACCCCTGAAGCCAAGCAGAAGTATGCTGTCATTTGTGTAACAATGCCCACTGCACGTATTTGCCGCAAGTGATTTCTAGAGATGGTCTCTCTCTGTGTTCTGTCTTCTTTCTTTCTCTCCTTCTCTTTAAACTCTTTCGTTTGGTTTCAAAATTCAGAGTTTGATTGTAAAATCTGTAAAAGAAAGCTATGAATCTCTTTTCGTGTCTTTCTCTGATTTTACTTCAGTAATTTTTCACATTTTATCATCATAACACTTAAATAAACACCATATTTGAATAA

mRNA sequence

TGATGTTTCATTGAAGAATCAACATGAACCCCTTGAATGAATTGGGCACAATCCAAAACAATAAACTATATCCTCTTTCCCCTCACCCACTTACTACTGTCAACTATCTCTCCATCTCTTACAAACACACATTCCCTAAAAATGGCATCCATGGCTATGACAGCCTCCTTCCTCCCTGTCACGGCCAAGCACCCCTCCGCCTCCACTCGAAGAGCCCTCGTCGTCGTCAAGGCCTCCGTCGATGGCTCGAATACCAACTTGGATATCAAGAATGTGAAGGTTGAGAGCAGGCAAGGGCGAAGGGAGTTGGTGGCAGCCGCCGTGACAGTGGCAGCGGCGAGCTTGGCAAAGGTTGCAATGGCGGACGAGCCTAAGCCTGGCACCCCTGAAGCCAAGCAGAAGTATGCTGTCATTTGTGTAACAATGCCCACTGCACGTATTTGCCGCAAGTGATTTCTAGAGATGGTCTCTCTCTGTGTTCTGTCTTCTTTCTTTCTCTCCTTCTCTTTAAACTCTTTCGTTTGGTTTCAAAATTCAGAGTTTGATTGTAAAATCTGTAAAAGAAAGCTATGAATCTCTTTTCGTGTCTTTCTCTGATTTTACTTCAGTAATTTTTCACATTTTATCATCATAACACTTAAATAAACACCATATTTGAATAA

Coding sequence (CDS)

ATGAATTGGGCACAATCCAAAACAATAAACTATATCCTCTTTCCCCTCACCCACTTACTACTGTCAACTATCTCTCCATCTCTTACAAACACACATTCCCTAAAAATGGCATCCATGGCTATGACAGCCTCCTTCCTCCCTGTCACGGCCAAGCACCCCTCCGCCTCCACTCGAAGAGCCCTCGTCGTCGTCAAGGCCTCCGTCGATGGCTCGAATACCAACTTGGATATCAAGAATGTGAAGGTTGAGAGCAGGCAAGGGCGAAGGGAGTTGGTGGCAGCCGCCGTGACAGTGGCAGCGGCGAGCTTGGCAAAGGTTGCAATGGCGGACGAGCCTAAGCCTGGCACCCCTGAAGCCAAGCAGAAGTATGCTGTCATTTGTGTAACAATGCCCACTGCACGTATTTGCCGCAAGTGA

Protein sequence

MNWAQSKTINYILFPLTHLLLSTISPSLTNTHSLKMASMAMTASFLPVTAKHPSASTRRALVVVKASVDGSNTNLDIKNVKVESRQGRRELVAAAVTVAAASLAKVAMADEPKPGTPEAKQKYAVICVTMPTARICRK

Homology

[Close]

BLAST of Tan0008084 vs. ExPASy Swiss-Prot
Match: Q39195 (Photosystem II 5 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSBT PE=3 SV=2)

HSP 1 Score: 89.0 bits (219), Expect = 4.7e-17
Identity = 56/104 (53.85%), Postives = 70/104 (67.31%), Query Frame = 0


Query: 36  MASMAMTASFLPVTAKHPSASTRRALVVVKASVDGSNTNLDIKNVKVESRQGRRELVAAA 95
           MASM MTA+F P  AK PSA+  R L VV+AS   +  +L++K  +  S   RR+L+  A
Sbjct: 1   MASMTMTATFFPAVAKVPSATGGRRLSVVRASTSDNTPSLEVK--EQSSTTMRRDLMFTA 60

Query: 96  VTVAAASLAKVAMA--DEPKPGTPEAKQKYAVICVTMPTARICR 138
              A  SLAKVAMA  +EPK GT  AK+KYA +CVTMPTA+ICR
Sbjct: 61  AAAAVCSLAKVAMAEEEEPKRGTEAAKKKYAQVCVTMPTAKICR 102

[Close]

BLAST of Tan0008084 vs. ExPASy Swiss-Prot
Match: B3EWI4 (Photosystem II 5 kDa protein, chloroplastic OS=Petunia hybrida OX=4102 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.3e-15
Identity = 58/107 (54.21%), Postives = 70/107 (65.42%), Query Frame = 0


Query: 36  MASMAMTASFL----PVTAKHPSASTRRALVVVKASVDGSNTNLDIKNVKVESRQGRREL 95
           MAS+ M +SFL       AK PSA+ RR +V+VKA  +G N N+ I   +     GRREL
Sbjct: 1   MASITMMSSFLGGSTVAPAKVPSAN-RRGVVMVKAMHEGEN-NVVISKNEESKNSGRREL 60

Query: 96  VAAAVTVAAASLAKVAMAD-EPKPGTPEAKQKYAVICVTMPTARICR 138
             A    AA S+AK AMAD EPK GTPEAK+KY+ +CVT PTARICR
Sbjct: 61  FFAMAAAAACSVAKTAMADEEPKRGTPEAKKKYSSVCVTNPTARICR 105

[Close]

BLAST of Tan0008084 vs. ExPASy Swiss-Prot
Match: P31336 (Photosystem II 5 kDa protein, chloroplastic OS=Gossypium hirsutum OX=3635 GN=PSBT PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.9e-11
Identity = 50/105 (47.62%), Postives = 62/105 (59.05%), Query Frame = 0


Query: 36  MASMAMTASFLPVT--AKHPSASTRRALVVVKASVDGSNTNLDIKNV-KVESRQGRRELV 95
           MAS+ MT SFL  T   K     T+R LVV  A+      ++ +    K E   GRRE++
Sbjct: 1   MASITMTTSFLSTTNLTKGSPRITQRRLVVANAAKGAQVESVQMSGERKTEGNNGRREMM 60

Query: 96  AAAVTVAAASLAKVAMADEPKPGTPEAKQKYAVICVTMPTARICR 138
            AA   A  S+A VA A EPK G+ EAK+ YA +CVTMPTARICR
Sbjct: 61  FAAAAAAICSVAGVATA-EPKRGSAEAKKAYAPVCVTMPTARICR 104

[Close]

BLAST of Tan0008084 vs. NCBI nr
Match: XP_008449703.1 (PREDICTED: photosystem II 5 kDa protein, chloroplastic [Cucumis melo] >KAA0041421.1 photosystem II 5 kDa protein [Cucumis melo var. makuwa] >TYJ96132.1 photosystem II 5 kDa protein [Cucumis melo var. makuwa])

HSP 1 Score: 155.2 bits (391), Expect = 4.0e-34
Identity = 96/136 (70.59%), Postives = 109/136 (80.15%), Query Frame = 0


Query: 9   INYILF---PLTHLLLSTISPSLTNTHSLKMASMAMTASFLPVTA-KHPSASTRRALVVV 68
           INYILF   P+  L+ +  +P+ +N   L MASMAMTASFLP TA K PSA+ RRAL+V 
Sbjct: 25  INYILFLLHPIPQLINNLSNPNFSN--FLNMASMAMTASFLPTTATKQPSATPRRALIVA 84

Query: 69  KASV--DGSNTNLDIKNVKVESRQGRRELVAAAVTVAAASLAKVAMADEPKPGTPEAKQK 128
           KAS   + SN NL++KNVKVESRQGRRELVAAAVTVAAA+LAK AMADEP  G+PEAKQK
Sbjct: 85  KASTSNETSNVNLEVKNVKVESRQGRRELVAAAVTVAAATLAKAAMADEPARGSPEAKQK 144

Query: 129 YAVICVTMPTARICRK 139
           YA ICVTMPTARICRK
Sbjct: 145 YAPICVTMPTARICRK 158

[Close]

BLAST of Tan0008084 vs. NCBI nr
Match: XP_038901593.1 (photosystem II 5 kDa protein, chloroplastic [Benincasa hispida])

HSP 1 Score: 147.1 bits (370), Expect = 1.1e-31
Identity = 86/106 (81.13%), Postives = 91/106 (85.85%), Query Frame = 0


Query: 36  MASMAMTASFLPVTA-KHPSASTRRALVVVKASV--DGSNTNLDIKNVKVESRQGRRELV 95
           MASMAMTASFLP TA K PS + RRALVV KAS   D SN NL+IKNVKVE+RQGRRELV
Sbjct: 1   MASMAMTASFLPATANKQPSTAARRALVVAKASTSSDASNVNLEIKNVKVENRQGRRELV 60

Query: 96  AAAVTVAAASLAKVAMADEPKPGTPEAKQKYAVICVTMPTARICRK 139
           AAAVTVAAA+LAK AMADEP  G+PEAKQKYA ICVTMPTARICRK
Sbjct: 61  AAAVTVAAATLAKAAMADEPPRGSPEAKQKYAPICVTMPTARICRK 106

[Close]

BLAST of Tan0008084 vs. NCBI nr
Match: XP_004143237.1 (photosystem II 5 kDa protein, chloroplastic [Cucumis sativus])

HSP 1 Score: 142.9 bits (359), Expect = 2.1e-30
Identity = 82/106 (77.36%), Postives = 90/106 (84.91%), Query Frame = 0


Query: 36  MASMAMTASFLPVTA-KHPSASTRRALVVVKASV--DGSNTNLDIKNVKVESRQGRRELV 95
           MASMAMTASFLP TA K PS++ RR L+V KAS     SN N+++KNVKVESRQGRRELV
Sbjct: 1   MASMAMTASFLPTTATKQPSSTARRPLIVAKASTSNQASNVNMEVKNVKVESRQGRRELV 60

Query: 96  AAAVTVAAASLAKVAMADEPKPGTPEAKQKYAVICVTMPTARICRK 139
           AAAVTVAAA+LAK AMADEP  G+PEAKQKYA ICVTMPTARICRK
Sbjct: 61  AAAVTVAAATLAKAAMADEPARGSPEAKQKYAPICVTMPTARICRK 106

[Close]

BLAST of Tan0008084 vs. NCBI nr
Match: XP_022148791.1 (photosystem II 5 kDa protein, chloroplastic [Momordica charantia])

HSP 1 Score: 134.0 bits (336), Expect = 9.6e-28
Identity = 78/106 (73.58%), Postives = 90/106 (84.91%), Query Frame = 0


Query: 36  MASMAMTASFLPVTAKHPSASTRRALVVVKASV---DGSNTNLDI-KNVKVESRQGRREL 95
           MAS A+ ASFLP+TAKHPSA+TRRAL+V KAS    D S  NL++ ++V+VES QGRREL
Sbjct: 1   MASTAIAASFLPLTAKHPSAATRRALIVAKASAAANDASKPNLEMNRSVQVESWQGRREL 60

Query: 96  VAAAVTVAAASLAKVAMADEPKPGTPEAKQKYAVICVTMPTARICR 138
           VAAAVTVAAA+LAK AMADEPK G+ EAKQKYA +CVTMPTARICR
Sbjct: 61  VAAAVTVAAATLAKAAMADEPKRGSAEAKQKYAPVCVTMPTARICR 106

[Close]

BLAST of Tan0008084 vs. NCBI nr
Match: XP_022944588.1 (photosystem II 5 kDa protein, chloroplastic [Cucurbita moschata] >XP_022986667.1 photosystem II 5 kDa protein, chloroplastic [Cucurbita maxima])

HSP 1 Score: 131.7 bits (330), Expect = 4.8e-27
Identity = 80/110 (72.73%), Postives = 86/110 (78.18%), Query Frame = 0


Query: 36  MASMAMTASFLPVTAKHPS-ASTRRALVVVKASV------DGSNTNLDIKNVKVESRQGR 95
           MASM++TASFLP TA  PS A+ RRAL V KAS         SN NL+IKNVKVES QGR
Sbjct: 1   MASMSITASFLPFTATQPSAAAARRALFVTKASTSAAATDSNSNANLEIKNVKVESSQGR 60

Query: 96  RELVAAAVTVAAASLAKVAMADEPKPGTPEAKQKYAVICVTMPTARICRK 139
           RELVAAAVTVAAA+ AK AMADEP  G+ EAKQKYA ICVTMPTARICRK
Sbjct: 61  RELVAAAVTVAAATFAKAAMADEPPRGSAEAKQKYAPICVTMPTARICRK 110

[Close]

BLAST of Tan0008084 vs. ExPASy TrEMBL
Match: A0A5A7TID9 (Photosystem II 5 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00980 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 2.0e-34
Identity = 96/136 (70.59%), Postives = 109/136 (80.15%), Query Frame = 0


Query: 9   INYILF---PLTHLLLSTISPSLTNTHSLKMASMAMTASFLPVTA-KHPSASTRRALVVV 68
           INYILF   P+  L+ +  +P+ +N   L MASMAMTASFLP TA K PSA+ RRAL+V 
Sbjct: 25  INYILFLLHPIPQLINNLSNPNFSN--FLNMASMAMTASFLPTTATKQPSATPRRALIVA 84

Query: 69  KASV--DGSNTNLDIKNVKVESRQGRRELVAAAVTVAAASLAKVAMADEPKPGTPEAKQK 128
           KAS   + SN NL++KNVKVESRQGRRELVAAAVTVAAA+LAK AMADEP  G+PEAKQK
Sbjct: 85  KASTSNETSNVNLEVKNVKVESRQGRRELVAAAVTVAAATLAKAAMADEPARGSPEAKQK 144

Query: 129 YAVICVTMPTARICRK 139
           YA ICVTMPTARICRK
Sbjct: 145 YAPICVTMPTARICRK 158

[Close]

BLAST of Tan0008084 vs. ExPASy TrEMBL
Match: A0A1S3BML8 (photosystem II 5 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491503 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 2.0e-34
Identity = 96/136 (70.59%), Postives = 109/136 (80.15%), Query Frame = 0


Query: 9   INYILF---PLTHLLLSTISPSLTNTHSLKMASMAMTASFLPVTA-KHPSASTRRALVVV 68
           INYILF   P+  L+ +  +P+ +N   L MASMAMTASFLP TA K PSA+ RRAL+V 
Sbjct: 25  INYILFLLHPIPQLINNLSNPNFSN--FLNMASMAMTASFLPTTATKQPSATPRRALIVA 84

Query: 69  KASV--DGSNTNLDIKNVKVESRQGRRELVAAAVTVAAASLAKVAMADEPKPGTPEAKQK 128
           KAS   + SN NL++KNVKVESRQGRRELVAAAVTVAAA+LAK AMADEP  G+PEAKQK
Sbjct: 85  KASTSNETSNVNLEVKNVKVESRQGRRELVAAAVTVAAATLAKAAMADEPARGSPEAKQK 144

Query: 129 YAVICVTMPTARICRK 139
           YA ICVTMPTARICRK
Sbjct: 145 YAPICVTMPTARICRK 158

[Close]

BLAST of Tan0008084 vs. ExPASy TrEMBL
Match: A0A0A0KIB2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G439930 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.0e-30
Identity = 82/106 (77.36%), Postives = 90/106 (84.91%), Query Frame = 0


Query: 36  MASMAMTASFLPVTA-KHPSASTRRALVVVKASV--DGSNTNLDIKNVKVESRQGRRELV 95
           MASMAMTASFLP TA K PS++ RR L+V KAS     SN N+++KNVKVESRQGRRELV
Sbjct: 1   MASMAMTASFLPTTATKQPSSTARRPLIVAKASTSNQASNVNMEVKNVKVESRQGRRELV 60

Query: 96  AAAVTVAAASLAKVAMADEPKPGTPEAKQKYAVICVTMPTARICRK 139
           AAAVTVAAA+LAK AMADEP  G+PEAKQKYA ICVTMPTARICRK
Sbjct: 61  AAAVTVAAATLAKAAMADEPARGSPEAKQKYAPICVTMPTARICRK 106

[Close]

BLAST of Tan0008084 vs. ExPASy TrEMBL
Match: A0A6J1D6G0 (photosystem II 5 kDa protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111017359 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 4.7e-28
Identity = 78/106 (73.58%), Postives = 90/106 (84.91%), Query Frame = 0


Query: 36  MASMAMTASFLPVTAKHPSASTRRALVVVKASV---DGSNTNLDI-KNVKVESRQGRREL 95
           MAS A+ ASFLP+TAKHPSA+TRRAL+V KAS    D S  NL++ ++V+VES QGRREL
Sbjct: 1   MASTAIAASFLPLTAKHPSAATRRALIVAKASAAANDASKPNLEMNRSVQVESWQGRREL 60

Query: 96  VAAAVTVAAASLAKVAMADEPKPGTPEAKQKYAVICVTMPTARICR 138
           VAAAVTVAAA+LAK AMADEPK G+ EAKQKYA +CVTMPTARICR
Sbjct: 61  VAAAVTVAAATLAKAAMADEPKRGSAEAKQKYAPVCVTMPTARICR 106

[Close]

BLAST of Tan0008084 vs. ExPASy TrEMBL
Match: A0A6J1J874 (photosystem II 5 kDa protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111484352 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 2.3e-27
Identity = 80/110 (72.73%), Postives = 86/110 (78.18%), Query Frame = 0


Query: 36  MASMAMTASFLPVTAKHPS-ASTRRALVVVKASV------DGSNTNLDIKNVKVESRQGR 95
           MASM++TASFLP TA  PS A+ RRAL V KAS         SN NL+IKNVKVES QGR
Sbjct: 1   MASMSITASFLPFTATQPSAAAARRALFVTKASTSAAATDSNSNANLEIKNVKVESSQGR 60

Query: 96  RELVAAAVTVAAASLAKVAMADEPKPGTPEAKQKYAVICVTMPTARICRK 139
           RELVAAAVTVAAA+ AK AMADEP  G+ EAKQKYA ICVTMPTARICRK
Sbjct: 61  RELVAAAVTVAAATFAKAAMADEPPRGSAEAKQKYAPICVTMPTARICRK 110

[Close]

BLAST of Tan0008084 vs. TAIR 10
Match: AT1G51400.1 (Photosystem II 5 kD protein )

HSP 1 Score: 90.9 bits (224), Expect = 8.7e-19
Identity = 59/106 (55.66%), Postives = 75/106 (70.75%), Query Frame = 0


Query: 36  MASMAMTASFLPVTAKHP---SASTRRALVVVKASVDGSNTNLDIKNVKVESRQGRRELV 95
           MASM MT+SFLP  +  P   S+++RR+L VVKAS   + T+L+ K  + +S + RR+LV
Sbjct: 1   MASMTMTSSFLPTVSNLPANISSNSRRSLTVVKASGSENTTSLENKK-QEQSMKMRRDLV 60

Query: 96  AAAVTVAAASLAKVAMA-DEPKPGTPEAKQKYAVICVTMPTARICR 138
             A   A  SLAKVAMA DEPK GT  AK+KYA +CVTMPTA+ICR
Sbjct: 61  FTAAAAAVCSLAKVAMADDEPKRGTEAAKKKYAPVCVTMPTAKICR 105

[Close]

BLAST of Tan0008084 vs. TAIR 10
Match: AT3G21055.1 (photosystem II subunit T )

HSP 1 Score: 89.0 bits (219), Expect = 3.3e-18
Identity = 56/104 (53.85%), Postives = 70/104 (67.31%), Query Frame = 0


Query: 36  MASMAMTASFLPVTAKHPSASTRRALVVVKASVDGSNTNLDIKNVKVESRQGRRELVAAA 95
           MASM MTA+F P  AK PSA+  R L VV+AS   +  +L++K  +  S   RR+L+  A
Sbjct: 1   MASMTMTATFFPAVAKVPSATGGRRLSVVRASTSDNTPSLEVK--EQSSTTMRRDLMFTA 60

Query: 96  VTVAAASLAKVAMA--DEPKPGTPEAKQKYAVICVTMPTARICR 138
              A  SLAKVAMA  +EPK GT  AK+KYA +CVTMPTA+ICR
Sbjct: 61  AAAAVCSLAKVAMAEEEEPKRGTEAAKKKYAQVCVTMPTAKICR 102

The following BLAST results are available for this feature:

BLAST of Tan0008084 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39195	4.7e-17	53.85	Photosystem II 5 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=P...	[more]
B3EWI4	3.3e-15	54.21	Photosystem II 5 kDa protein, chloroplastic OS=Petunia hybrida OX=4102 PE=1 SV=1	[more]
P31336	2.9e-11	47.62	Photosystem II 5 kDa protein, chloroplastic OS=Gossypium hirsutum OX=3635 GN=PSB...	[more]

BLAST of Tan0008084 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449703.1	4.0e-34	70.59	PREDICTED: photosystem II 5 kDa protein, chloroplastic [Cucumis melo] >KAA004142...	[more]
XP_038901593.1	1.1e-31	81.13	photosystem II 5 kDa protein, chloroplastic [Benincasa hispida]	[more]
XP_004143237.1	2.1e-30	77.36	photosystem II 5 kDa protein, chloroplastic [Cucumis sativus]	[more]
XP_022148791.1	9.6e-28	73.58	photosystem II 5 kDa protein, chloroplastic [Momordica charantia]	[more]
XP_022944588.1	4.8e-27	72.73	photosystem II 5 kDa protein, chloroplastic [Cucurbita moschata] >XP_022986667.1...	[more]

BLAST of Tan0008084 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TID9	2.0e-34	70.59	Photosystem II 5 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3BML8	2.0e-34	70.59	photosystem II 5 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491...	[more]
A0A0A0KIB2	1.0e-30	77.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G439930 PE=4 SV=1	[more]
A0A6J1D6G0	4.7e-28	73.58	photosystem II 5 kDa protein, chloroplastic OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1J874	2.3e-27	72.73	photosystem II 5 kDa protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of Tan0008084 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G51400.1	8.7e-19	55.66	Photosystem II 5 kD protein	[more]
AT3G21055.1	3.3e-18	53.85	photosystem II subunit T	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040296	Photosystem II 5kDa protein, chloroplastic	PANTHER	PTHR34940	PHOTOSYSTEM II 5 KDA PROTEIN, CHLOROPLASTIC	coord: 36..138
None	No IPR available	PANTHER	PTHR34940:SF4	PHOTOSYSTEM II 5 KDA PROTEIN, CHLOROPLASTIC	coord: 36..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0008084.1	Tan0008084.1	mRNA