Tan0008077 (gene) Snake gourd v1

Overview
NameTan0008077
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCACTA en-spm transposon protein
LocationLG09: 31117476 .. 31118519 (+)
RNA-Seq ExpressionTan0008077
SyntenyTan0008077
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTCAAACGATGAGGGTGAACCTGTAGAAATGAATGAAGCGGCATCCTCTAATAGTAGTCAGGTTCGTGGTGTTTCACGTGGACTTGGTCTTGCTAGGATTATTGAGGCCACGGGGGATAGAATAAATGTTACATGGAGTCAAGAACAAGGCAAACCAGTTGGAAGTGTCGCTAGTCTCTTTAACAACGAAATTGGAATTCTCACGAGGTCGTTCGTCCCCTTAAAATATGCAACTAAATATGACATTTCAAATGAAGTTTTTGTCAACATCATAGAGCGATTCCTGGTAAGTTAGATAATTTGCTAACAAGTTTATTATTGAATTACAATTAAATACTAACGAGTGATATTTCTTTTATTGGTTAGAATAAATTTGATGTAGACATCTCGAAGGACTATATTAGGAAATATATTTGTTACGAGATTAGAAATCGATATAAGGATTACAGATCGAGGTTGCATCAATACTACAAAAAACAGGGGGACCCACACGGGGAAGCTCGTGAGCGCCACACACAAAGATGTTTCACCTAAAGATTGGAAAAATTATGTGATGGATGGGAGACACAACAATGGAAGGTAAACTTGTGGGCTAAATTTTAAAGAATACATGAGTCTCTTTTATTATCATACATTATAATGCAGGACAAGTCGACAAAGAACAAAGAGAGTAGAAGAAAGCTCCCTTTCAACCATTGTGCTGGAACAAAATCATTTCTTACTCATAGAGAAGAAAAGGTATGTTATATACTTTATATCTAGAAAGGAGAAGATGGTACATACTTGAGTCTCATTGAAATCTTCCATCAAACTCATTGGTGCATTTGCAAAGGGATGGGTGATATTGCGACAAGTGAAGCACATGTAAGTATCTTTTAGATGTTTTGTTAGATAATGTTATGTTTTTGAAGATCAATATCATTTATATATTGTTCTTGATGTATATAGGCAAAAAATGGTGGCCCTAGCAGAAGAGCAAGTCAATTCTAGTACACCGATGACTAACGAAGAAGTTGTAGCTACCGTTCTTGGAACATGA

mRNA sequence

ATGAGTTCAAACGATGAGGGTGAACCTGTAGAAATGAATGAAGCGGCATCCTCTAATAGTAGTCAGGTTCGTGGTGTTTCACGTGGACTTGGTCTTGCTAGGATTATTGAGGCCACGGGGGATAGAATAAATGTTACATGGAGTCAAGAACAAGGCAAACCAGTTGGAAGTGTCGCTAGTCTCTTTAACAACGAAATTGGAATTCTCACGAGGTCGTTCGTCCCCTTAAAATATGCAACTAAATATGACATTTCAAATGAAGTTTTTGTCAACATCATAGAGCGATTCCTGGACAAGTCGACAAAGAACAAAGAGAGTAGAAGAAAGCTCCCTTTCAACCATTGTGCTGGAACAAAATCATTTCTTACTCATAGAGAAGAAAAGGTATATCAATATCATTTATATATTGTTCTTGATGTATATAGGCAAAAAATGGTGGCCCTAGCAGAAGAGCAAGTCAATTCTAGTACACCGATGACTAACGAAGAAGTTGTAGCTACCGTTCTTGGAACATGA

Coding sequence (CDS)

ATGAGTTCAAACGATGAGGGTGAACCTGTAGAAATGAATGAAGCGGCATCCTCTAATAGTAGTCAGGTTCGTGGTGTTTCACGTGGACTTGGTCTTGCTAGGATTATTGAGGCCACGGGGGATAGAATAAATGTTACATGGAGTCAAGAACAAGGCAAACCAGTTGGAAGTGTCGCTAGTCTCTTTAACAACGAAATTGGAATTCTCACGAGGTCGTTCGTCCCCTTAAAATATGCAACTAAATATGACATTTCAAATGAAGTTTTTGTCAACATCATAGAGCGATTCCTGGACAAGTCGACAAAGAACAAAGAGAGTAGAAGAAAGCTCCCTTTCAACCATTGTGCTGGAACAAAATCATTTCTTACTCATAGAGAAGAAAAGGTATATCAATATCATTTATATATTGTTCTTGATGTATATAGGCAAAAAATGGTGGCCCTAGCAGAAGAGCAAGTCAATTCTAGTACACCGATGACTAACGAAGAAGTTGTAGCTACCGTTCTTGGAACATGA

Protein sequence

MSSNDEGEPVEMNEAASSNSSQVRGVSRGLGLARIIEATGDRINVTWSQEQGKPVGSVASLFNNEIGILTRSFVPLKYATKYDISNEVFVNIIERFLDKSTKNKESRRKLPFNHCAGTKSFLTHREEKVYQYHLYIVLDVYRQKMVALAEEQVNSSTPMTNEEVVATVLGT
Homology
BLAST of Tan0008077 vs. NCBI nr
Match: XP_038895321.1 (uncharacterized protein LOC120083572 isoform X3 [Benincasa hispida])

HSP 1 Score: 88.6 bits (218), Expect = 5.7e-14
Identity = 61/187 (32.62%), Postives = 81/187 (43.32%), Query Frame = 0

Query: 22  QVRGVSRGLGLARIIEATGDRINVTWSQEQGKPVGSVASLFNNEIGILTRSFVPLKYATK 81
           +VRG SRG+ L +   AT  RI VTW+  QGKP+G +ASLFN EIG+L R F+PLKY  +
Sbjct: 136 RVRGASRGVRLNK-TTATMGRIKVTWTPTQGKPIGDMASLFNGEIGVLVRKFIPLKYEKQ 195

Query: 82  YDISNEVFVNIIERFL-------------------------------------------- 139
            DI NE++  + E+ L                                            
Sbjct: 196 KDIPNELYDILTEQLLNQFDVDISQPHIKRYIYYEIGNRFKDYRWTLYKHYQKYADPVEA 255

BLAST of Tan0008077 vs. NCBI nr
Match: XP_038895320.1 (uncharacterized protein LOC120083572 isoform X2 [Benincasa hispida])

HSP 1 Score: 88.6 bits (218), Expect = 5.7e-14
Identity = 61/187 (32.62%), Postives = 81/187 (43.32%), Query Frame = 0

Query: 22  QVRGVSRGLGLARIIEATGDRINVTWSQEQGKPVGSVASLFNNEIGILTRSFVPLKYATK 81
           +VRG SRG+ L +   AT  RI VTW+  QGKP+G +ASLFN EIG+L R F+PLKY  +
Sbjct: 136 RVRGASRGVRLNK-TTATMGRIKVTWTPTQGKPIGDMASLFNGEIGVLVRKFIPLKYEKQ 195

Query: 82  YDISNEVFVNIIERFL-------------------------------------------- 139
            DI NE++  + E+ L                                            
Sbjct: 196 KDIPNELYDILTEQLLNQFDVDISQPHIKRYIYYEIGNRFKDYRWTLYKHYQKYADPVEA 255

BLAST of Tan0008077 vs. NCBI nr
Match: XP_015383029.1 (uncharacterized protein LOC112495473 isoform X2 [Citrus sinensis])

HSP 1 Score: 88.6 bits (218), Expect = 5.7e-14
Identity = 45/115 (39.13%), Postives = 77/115 (66.96%), Query Frame = 0

Query: 14  EAASSNSSQVRGVSRGLGLARIIEATGDRINVTWSQEQGKPVGSVASLFNNEIGILTRSF 73
           E   +   + RG SRG+GL R+++A G+RI++++ +E+ +P+ + AS F NEIG+  R F
Sbjct: 32  EVGLTTKRKGRGPSRGVGLDRLLQA-GERIHISFIEEEWRPICNHASRFANEIGVAVRLF 91

Query: 74  VPLKYATKYDISNEVFVNIIERFLDKSTKNKESRRKLPFNHCAGTKSFLTHREEK 129
            P++Y +   I ++    + ER L+++ KN  +R+KL +NH  G+ SFL+HRE+K
Sbjct: 92  YPIQYESWGAIPDKEKKVVFERLLERARKNVGNRKKLKYNHRGGSLSFLSHREKK 145

BLAST of Tan0008077 vs. NCBI nr
Match: XP_024951273.1 (uncharacterized protein LOC112495473 isoform X3 [Citrus sinensis])

HSP 1 Score: 88.6 bits (218), Expect = 5.7e-14
Identity = 45/115 (39.13%), Postives = 77/115 (66.96%), Query Frame = 0

Query: 14  EAASSNSSQVRGVSRGLGLARIIEATGDRINVTWSQEQGKPVGSVASLFNNEIGILTRSF 73
           E   +   + RG SRG+GL R+++A G+RI++++ +E+ +P+ + AS F NEIG+  R F
Sbjct: 32  EVGLTTKRKGRGPSRGVGLDRLLQA-GERIHISFIEEEWRPICNHASRFANEIGVAVRLF 91

Query: 74  VPLKYATKYDISNEVFVNIIERFLDKSTKNKESRRKLPFNHCAGTKSFLTHREEK 129
            P++Y +   I ++    + ER L+++ KN  +R+KL +NH  G+ SFL+HRE+K
Sbjct: 92  YPIQYESWGAIPDKEKKVVFERLLERARKNVGNRKKLKYNHRGGSLSFLSHREKK 145

BLAST of Tan0008077 vs. NCBI nr
Match: XP_038895319.1 (uncharacterized protein LOC120083572 isoform X1 [Benincasa hispida])

HSP 1 Score: 88.2 bits (217), Expect = 7.5e-14
Identity = 68/235 (28.94%), Postives = 101/235 (42.98%), Query Frame = 0

Query: 22  QVRGVSRGLGLARIIEATGDRINVTWSQEQGKPVGSVASLFNNEIGILTRSFVPLKYATK 81
           +VRG SRG+ L +   AT  RI VTW+  QGKP+G +ASLFN EIG+L R F+PLKY  +
Sbjct: 136 RVRGASRGVRLNK-TTATMGRIKVTWTPTQGKPIGDMASLFNGEIGVLVRKFIPLKYEKQ 195

Query: 82  YDISNEVFVNIIERFL-------------------------------------------- 141
            DI NE++  + E+ L                                            
Sbjct: 196 KDIPNELYDILTEQLLNQFDVDISQPHIKRYIYYEIGNRFKDYRWTLYKHYQKYADPVEA 255

Query: 142 --------------------------DKSTKNKESRRKLPFNHCAGTKSFLTHREEKVYQ 171
                                     +KS +NK SR K+ FNHC G+KSFL+ R +K  +
Sbjct: 256 RRNPYKYTTTDDWNILCDRWESSSWKEKSARNKVSRSKIRFNHCGGSKSFLSRRVDKGKE 315

BLAST of Tan0008077 vs. ExPASy TrEMBL
Match: A0A5P1F7M3 (Peroxidase OS=Asparagus officinalis OX=4686 GN=A4U43_C04F21770 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 1.5e-07
Identity = 47/148 (31.76%), Postives = 68/148 (45.95%), Query Frame = 0

Query: 23  VRGVSRGLGLARIIEATGDRINVTWSQEQGKPVGSVASLFNNEIGILTRSFVPLKYATKY 82
           VRG +RG G  R++   G  I+V      G P G  A+   NEIG   R+  P++     
Sbjct: 115 VRGATRGKGTERLVRQLGHAISVPIPSSSGAPEGEHATSLANEIGKEIRTSAPVRNCGWD 174

Query: 83  DISNEVFVNIIERFLDKSTKNKESRRKLPFNHCAGTKSFLTHREEKVYQYHLYIVLDVYR 142
           +I   +   II R   KS K K SR KLP+NH +G++SF               +L + R
Sbjct: 175 NIDAGIREAIITRVRTKSDKAKVSRSKLPYNHISGSRSFAA------------AMLLIER 234

Query: 143 QKMVALAEEQVNSSTPMTNEEVVATVLG 171
                + + Q   ++PM   E+   VLG
Sbjct: 235 LVNKTIEQSQPEVTSPMNEFEISIEVLG 250

BLAST of Tan0008077 vs. ExPASy TrEMBL
Match: A0A5P1ECU8 (Uncharacterized protein OS=Asparagus officinalis OX=4686 GN=A4U43_C07F16860 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 7.3e-07
Identity = 39/104 (37.50%), Postives = 53/104 (50.96%), Query Frame = 0

Query: 18  SNSSQVRGVSRGLGLARIIEATGDRINVTWSQEQGKPVGSVASLFNNEIGILTRSFVPLK 77
           S S  VR  +RG G+ R++   G  I+V      G P G  A+   NEIG   R+  P+ 
Sbjct: 140 STSRNVRCATRGKGIERLVRQLGHAISVPIPSSSGAPEGEHATSLANEIGKEIRTSAPVS 199

Query: 78  YATKYDISNEVFVNIIERFLDKSTKNKESRRKLPFNHCAGTKSF 122
                +I   +   II R   KS K K SR KLP+NH +G++SF
Sbjct: 200 NCGWDNIDAGIREAIIMRVRTKSDKAKVSRSKLPYNHISGSRSF 243

BLAST of Tan0008077 vs. ExPASy TrEMBL
Match: A0A6V7NJ46 (Uncharacterized protein OS=Ananas comosus var. bracteatus OX=296719 GN=CB5_LOCUS1832 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 4.8e-06
Identity = 41/128 (32.03%), Postives = 69/128 (53.91%), Query Frame = 0

Query: 51  QGKPVGSVASLFNNEIGILTRSFVPLKYATKYDISNEVFVNIIERFLDKSTKNKESRRKL 110
           + +PVG  +   + EIGI+ R F P+K +  ++I++   + + ER + +ST N  +R KL
Sbjct: 141 ENRPVGDDSCKLSREIGIVVRQFAPIKISGWHEIADVDKLALYERIVRRSTANSSNRGKL 200

Query: 111 PFNHCAGTKSFLTHREEKVYQYH--LYIVLDVYRQKMVALAEEQV-----NSSTPMTNEE 170
           P+ H AGT++F+  R  K+  YH       D  +++   +   Q       +  PMT +E
Sbjct: 201 PYIHRAGTRTFVATR-HKLGCYHNGKGWANDGAKKRYETMVNMQSQPPSDENEVPMTEQE 260

Query: 171 VVATVLGT 172
           + A VLGT
Sbjct: 261 ICAQVLGT 267

BLAST of Tan0008077 vs. ExPASy TrEMBL
Match: A0A444Y2U8 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B08g091903 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 3.1e-05
Identity = 35/106 (33.02%), Postives = 56/106 (52.83%), Query Frame = 0

Query: 24  RGVSRGLGLARIIEA-TGDRINVTWSQEQGKPVGSVASLFNNEIGILTRSFVPLKYATKY 83
           RG SRG+ + R+I+  T  ++ +  S E   P G  A+LF +E+GI+TR   PL      
Sbjct: 117 RGPSRGIAINRVIKTKTNGKLELPISLENLAPNGIHANLFASEVGIVTRQNAPLDVEKWS 176

Query: 84  DISNEVFVNIIERFLDKSTKNKESRRKLPFNHCAGTKSFLTHREEK 129
            + +EV   I +  L KS +NK +R+     H  G ++F   R ++
Sbjct: 177 QVGDEVKQKICDLVLKKSLRNKNNRKHHVVPHIVGRRTFQVVRRDR 222

BLAST of Tan0008077 vs. ExPASy TrEMBL
Match: A0A7J6H984 (Transpos_assoc domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_011475 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 3.1e-05
Identity = 31/114 (27.19%), Postives = 61/114 (53.51%), Query Frame = 0

Query: 14  EAASSNSSQVRGVSRGLGLARIIEATGDRINVTWSQEQGKPVGSVASLFNNEIGILTRSF 73
           ++ +    +  G +R  G ++++  T +++ VT  + +  PVG  AS   +EIG + ++ 
Sbjct: 148 DSTTPTKKRTHGQNRSKGTSKLVADTKNKLPVTVKKGELHPVGVNASQLASEIGFILKNH 207

Query: 74  VPLKYATKYDISNEVFVNIIERFLDKSTKNKESRRKLPFNHCAGTKSFLTHREE 128
            PLKY    ++  E    I  R   +S    +++ K+P+NH  G+KSF+  ++E
Sbjct: 208 APLKYKGWKNVPPEDKALIHTRIKKRSVAAAKNKAKVPYNHRGGSKSFILEQKE 261

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_038895321.15.7e-1432.62uncharacterized protein LOC120083572 isoform X3 [Benincasa hispida][more]
XP_038895320.15.7e-1432.62uncharacterized protein LOC120083572 isoform X2 [Benincasa hispida][more]
XP_015383029.15.7e-1439.13uncharacterized protein LOC112495473 isoform X2 [Citrus sinensis][more]
XP_024951273.15.7e-1439.13uncharacterized protein LOC112495473 isoform X3 [Citrus sinensis][more]
XP_038895319.17.5e-1428.94uncharacterized protein LOC120083572 isoform X1 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
A0A5P1F7M31.5e-0731.76Peroxidase OS=Asparagus officinalis OX=4686 GN=A4U43_C04F21770 PE=3 SV=1[more]
A0A5P1ECU87.3e-0737.50Uncharacterized protein OS=Asparagus officinalis OX=4686 GN=A4U43_C07F16860 PE=4... [more]
A0A6V7NJ464.8e-0632.03Uncharacterized protein OS=Ananas comosus var. bracteatus OX=296719 GN=CB5_LOCUS... [more]
A0A444Y2U83.1e-0533.02Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B08g091903 PE=4 SV=1[more]
A0A7J6H9843.1e-0527.19Transpos_assoc domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_011... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0008077.1Tan0008077.1mRNA