Tan0008077 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTCAAACGATGAGGGTGAACCTGTAGAAATGAATGAAGCGGCATCCTCTAATAGTAGTCAGGTTCGTGGTGTTTCACGTGGACTTGGTCTTGCTAGGATTATTGAGGCCACGGGGGATAGAATAAATGTTACATGGAGTCAAGAACAAGGCAAACCAGTTGGAAGTGTCGCTAGTCTCTTTAACAACGAAATTGGAATTCTCACGAGGTCGTTCGTCCCCTTAAAATATGCAACTAAATATGACATTTCAAATGAAGTTTTTGTCAACATCATAGAGCGATTCCTGGTAAGTTAGATAATTTGCTAACAAGTTTATTATTGAATTACAATTAAATACTAACGAGTGATATTTCTTTTATTGGTTAGAATAAATTTGATGTAGACATCTCGAAGGACTATATTAGGAAATATATTTGTTACGAGATTAGAAATCGATATAAGGATTACAGATCGAGGTTGCATCAATACTACAAAAAACAGGGGGACCCACACGGGGAAGCTCGTGAGCGCCACACACAAAGATGTTTCACCTAAAGATTGGAAAAATTATGTGATGGATGGGAGACACAACAATGGAAGGTAAACTTGTGGGCTAAATTTTAAAGAATACATGAGTCTCTTTTATTATCATACATTATAATGCAGGACAAGTCGACAAAGAACAAAGAGAGTAGAAGAAAGCTCCCTTTCAACCATTGTGCTGGAACAAAATCATTTCTTACTCATAGAGAAGAAAAGGTATGTTATATACTTTATATCTAGAAAGGAGAAGATGGTACATACTTGAGTCTCATTGAAATCTTCCATCAAACTCATTGGTGCATTTGCAAAGGGATGGGTGATATTGCGACAAGTGAAGCACATGTAAGTATCTTTTAGATGTTTTGTTAGATAATGTTATGTTTTTGAAGATCAATATCATTTATATATTGTTCTTGATGTATATAGGCAAAAAATGGTGGCCCTAGCAGAAGAGCAAGTCAATTCTAGTACACCGATGACTAACGAAGAAGTTGTAGCTACCGTTCTTGGAACATGA ATGAGTTCAAACGATGAGGGTGAACCTGTAGAAATGAATGAAGCGGCATCCTCTAATAGTAGTCAGGTTCGTGGTGTTTCACGTGGACTTGGTCTTGCTAGGATTATTGAGGCCACGGGGGATAGAATAAATGTTACATGGAGTCAAGAACAAGGCAAACCAGTTGGAAGTGTCGCTAGTCTCTTTAACAACGAAATTGGAATTCTCACGAGGTCGTTCGTCCCCTTAAAATATGCAACTAAATATGACATTTCAAATGAAGTTTTTGTCAACATCATAGAGCGATTCCTGGACAAGTCGACAAAGAACAAAGAGAGTAGAAGAAAGCTCCCTTTCAACCATTGTGCTGGAACAAAATCATTTCTTACTCATAGAGAAGAAAAGGTATATCAATATCATTTATATATTGTTCTTGATGTATATAGGCAAAAAATGGTGGCCCTAGCAGAAGAGCAAGTCAATTCTAGTACACCGATGACTAACGAAGAAGTTGTAGCTACCGTTCTTGGAACATGA ATGAGTTCAAACGATGAGGGTGAACCTGTAGAAATGAATGAAGCGGCATCCTCTAATAGTAGTCAGGTTCGTGGTGTTTCACGTGGACTTGGTCTTGCTAGGATTATTGAGGCCACGGGGGATAGAATAAATGTTACATGGAGTCAAGAACAAGGCAAACCAGTTGGAAGTGTCGCTAGTCTCTTTAACAACGAAATTGGAATTCTCACGAGGTCGTTCGTCCCCTTAAAATATGCAACTAAATATGACATTTCAAATGAAGTTTTTGTCAACATCATAGAGCGATTCCTGGACAAGTCGACAAAGAACAAAGAGAGTAGAAGAAAGCTCCCTTTCAACCATTGTGCTGGAACAAAATCATTTCTTACTCATAGAGAAGAAAAGGTATATCAATATCATTTATATATTGTTCTTGATGTATATAGGCAAAAAATGGTGGCCCTAGCAGAAGAGCAAGTCAATTCTAGTACACCGATGACTAACGAAGAAGTTGTAGCTACCGTTCTTGGAACATGA MSSNDEGEPVEMNEAASSNSSQVRGVSRGLGLARIIEATGDRINVTWSQEQGKPVGSVASLFNNEIGILTRSFVPLKYATKYDISNEVFVNIIERFLDKSTKNKESRRKLPFNHCAGTKSFLTHREEKVYQYHLYIVLDVYRQKMVALAEEQVNSSTPMTNEEVVATVLGT Homology
BLAST of Tan0008077 vs. NCBI nr
Match: XP_038895321.1 (uncharacterized protein LOC120083572 isoform X3 [Benincasa hispida]) HSP 1 Score: 88.6 bits (218), Expect = 5.7e-14 Identity = 61/187 (32.62%), Postives = 81/187 (43.32%), Query Frame = 0
BLAST of Tan0008077 vs. NCBI nr
Match: XP_038895320.1 (uncharacterized protein LOC120083572 isoform X2 [Benincasa hispida]) HSP 1 Score: 88.6 bits (218), Expect = 5.7e-14 Identity = 61/187 (32.62%), Postives = 81/187 (43.32%), Query Frame = 0
BLAST of Tan0008077 vs. NCBI nr
Match: XP_015383029.1 (uncharacterized protein LOC112495473 isoform X2 [Citrus sinensis]) HSP 1 Score: 88.6 bits (218), Expect = 5.7e-14 Identity = 45/115 (39.13%), Postives = 77/115 (66.96%), Query Frame = 0
BLAST of Tan0008077 vs. NCBI nr
Match: XP_024951273.1 (uncharacterized protein LOC112495473 isoform X3 [Citrus sinensis]) HSP 1 Score: 88.6 bits (218), Expect = 5.7e-14 Identity = 45/115 (39.13%), Postives = 77/115 (66.96%), Query Frame = 0
BLAST of Tan0008077 vs. NCBI nr
Match: XP_038895319.1 (uncharacterized protein LOC120083572 isoform X1 [Benincasa hispida]) HSP 1 Score: 88.2 bits (217), Expect = 7.5e-14 Identity = 68/235 (28.94%), Postives = 101/235 (42.98%), Query Frame = 0
BLAST of Tan0008077 vs. ExPASy TrEMBL
Match: A0A5P1F7M3 (Peroxidase OS=Asparagus officinalis OX=4686 GN=A4U43_C04F21770 PE=3 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 1.5e-07 Identity = 47/148 (31.76%), Postives = 68/148 (45.95%), Query Frame = 0
BLAST of Tan0008077 vs. ExPASy TrEMBL
Match: A0A5P1ECU8 (Uncharacterized protein OS=Asparagus officinalis OX=4686 GN=A4U43_C07F16860 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 7.3e-07 Identity = 39/104 (37.50%), Postives = 53/104 (50.96%), Query Frame = 0
BLAST of Tan0008077 vs. ExPASy TrEMBL
Match: A0A6V7NJ46 (Uncharacterized protein OS=Ananas comosus var. bracteatus OX=296719 GN=CB5_LOCUS1832 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 4.8e-06 Identity = 41/128 (32.03%), Postives = 69/128 (53.91%), Query Frame = 0
BLAST of Tan0008077 vs. ExPASy TrEMBL
Match: A0A444Y2U8 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B08g091903 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 3.1e-05 Identity = 35/106 (33.02%), Postives = 56/106 (52.83%), Query Frame = 0
BLAST of Tan0008077 vs. ExPASy TrEMBL
Match: A0A7J6H984 (Transpos_assoc domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_011475 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 3.1e-05 Identity = 31/114 (27.19%), Postives = 61/114 (53.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|