Tan0008042 (gene) Snake gourd v1

Overview


Name	Tan0008042
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	non-specific lipid-transfer protein 2-like
Location	LG09: 69990212 .. 69991028 (+)
RNA-Seq Expression	Tan0008042
Synteny	Tan0008042

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCCCTTTTTCTAGAGATGATCATCTCCATTCAAATATTAACAATTAAAACACATTATTATTTCTCAAAGTCTCTCTCCAACTTTTCCCCCCTATAAATTGAGATCCAAAAACCAAATTTAATTAACCCCAAAATCATACATCCATCCATATATCTCTCTCTTTTTTTCAACTAAAATGAAGGCATCATTATCAATATCATGGGTAGGCAAATTGGCAATAATAATAGCTGTTATTTTGGTGATGAGAGAAGCAATGGTGGAAGCAGCAGTGACATGCAACCCATTGCAAATGAGCCCTTGTGTGAGCGCCATAATATCATCAACTCCCCCCTCAAAGCTGTGCTGTGCCAAGATCAAGGAGCAGAAGCCATGTCTCTGTGATTACCTCAAAAACCCTTCTCTCAGGAACTTTGTGGACTCTCCAAATGCCAGGAAAGTCGCCAATGACTGTGGAACTCCTTTTCCCACTTGCTCAACAAATCACTTTTAATTTAACTGCTTCTTCTTCTTCTTCTTCTTCTTCCTTTCTGTGTATTCATATCATATATATGTGATTGTGAGATCTTCTGTCCTCTTTGTGTTCGTTGCAGTCGTTTTTCATATCTGTCTATGCTATGCCTACGTTTTGTAACTCTCATCTGTGTTTGTTTTCTTTTCTGTTGTCTTTTGCTTTCTTCAATAATGAATGGAAACTTGGAGTTGGGTATTATATATTATATCAGTGATTCTGTTCAAGATCTCGCGTCGCGTCGAAAAGATGAAAAGACCTCACAATGATCTTTATAAGATATATATAAGTTACTTAGCTTCTATCA

mRNA sequence

TTCCCCTTTTTCTAGAGATGATCATCTCCATTCAAATATTAACAATTAAAACACATTATTATTTCTCAAAGTCTCTCTCCAACTTTTCCCCCCTATAAATTGAGATCCAAAAACCAAATTTAATTAACCCCAAAATCATACATCCATCCATATATCTCTCTCTTTTTTTCAACTAAAATGAAGGCATCATTATCAATATCATGGGTAGGCAAATTGGCAATAATAATAGCTGTTATTTTGGTGATGAGAGAAGCAATGGTGGAAGCAGCAGTGACATGCAACCCATTGCAAATGAGCCCTTGTGTGAGCGCCATAATATCATCAACTCCCCCCTCAAAGCTGTGCTGTGCCAAGATCAAGGAGCAGAAGCCATGTCTCTGTGATTACCTCAAAAACCCTTCTCTCAGGAACTTTGTGGACTCTCCAAATGCCAGGAAAGTCGCCAATGACTGTGGAACTCCTTTTCCCACTTGCTCAACAAATCACTTTTAATTTAACTGCTTCTTCTTCTTCTTCTTCTTCTTCCTTTCTGTGTATTCATATCATATATATGTGATTGTGAGATCTTCTGTCCTCTTTGTGTTCGTTGCAGTCGTTTTTCATATCTGTCTATGCTATGCCTACGTTTTGTAACTCTCATCTGTGTTTGTTTTCTTTTCTGTTGTCTTTTGCTTTCTTCAATAATGAATGGAAACTTGGAGTTGGGTATTATATATTATATCAGTGATTCTGTTCAAGATCTCGCGTCGCGTCGAAAAGATGAAAAGACCTCACAATGATCTTTATAAGATATATATAAGTTACTTAGCTTCTATCA

Coding sequence (CDS)

ATGAAGGCATCATTATCAATATCATGGGTAGGCAAATTGGCAATAATAATAGCTGTTATTTTGGTGATGAGAGAAGCAATGGTGGAAGCAGCAGTGACATGCAACCCATTGCAAATGAGCCCTTGTGTGAGCGCCATAATATCATCAACTCCCCCCTCAAAGCTGTGCTGTGCCAAGATCAAGGAGCAGAAGCCATGTCTCTGTGATTACCTCAAAAACCCTTCTCTCAGGAACTTTGTGGACTCTCCAAATGCCAGGAAAGTCGCCAATGACTGTGGAACTCCTTTTCCCACTTGCTCAACAAATCACTTTTAA

Protein sequence

MKASLSISWVGKLAIIIAVILVMREAMVEAAVTCNPLQMSPCVSAIISSTPPSKLCCAKIKEQKPCLCDYLKNPSLRNFVDSPNARKVANDCGTPFPTCSTNHF

Homology

[Close]

BLAST of Tan0008042 vs. ExPASy Swiss-Prot
Match: P82353 (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 2.0e-20
Identity = 41/68 (60.29%), Postives = 53/68 (77.94%), Query Frame = 0


Query: 32  VTCNPLQMSPCVSAIISSTPPSKLCCAKIKEQKPCLCDYLKNPSLRNFVDSPNARKVAND 91
           VTC+P+Q+SPC+  I S  P    CC K++EQ+PCLC YLKNPSLR +V+SPNARK+A++
Sbjct: 1   VTCSPVQLSPCLGPINSGAPSPTTCCQKLREQRPCLCGYLKNPSLRQYVNSPNARKLASN 60

Query: 92  CGTPFPTC 100
           CG P P C
Sbjct: 61  CGVPVPQC 68

[Close]

BLAST of Tan0008042 vs. ExPASy Swiss-Prot
Match: Q43681 (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.9e-19
Identity = 44/99 (44.44%), Postives = 67/99 (67.68%), Query Frame = 0


Query: 1   MKASLSISWVGKLAIIIAVILVMREAMVEAAVTCNPLQMSPCVSAIISSTPPSKLCCAKI 60
           MK  + +S V   A+++  + ++    V  AVTCNP ++S CV AI   + PS  CC+K+
Sbjct: 3   MKMKMKMSVV--CAVVVVALFLIDVGPVAEAVTCNPTELSSCVPAITGGSKPSSTCCSKL 62

Query: 61  KEQKPCLCDYLKNPSLRNFVDSPNARKVANDCGTPFPTC 100
           K Q+PCLC+Y+KNPSL+ +V+SP A+KV ++CG  +P C
Sbjct: 63  KVQEPCLCNYIKNPSLKQYVNSPGAKKVLSNCGVTYPNC 99

[Close]

BLAST of Tan0008042 vs. ExPASy Swiss-Prot
Match: P86809 (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=278110 PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.9e-18
Identity = 38/61 (62.30%), Postives = 51/61 (83.61%), Query Frame = 0


Query: 33 TCNPLQMSPCVSAIISSTPPSKLCCAKIKEQKPCLCDYLKNPSLRNFVDSPNARKVANDC 92
          TC+ +Q+SPC++AI  +TPPS  CC K+KEQKPCLC YLK+P+L+N+V+SP ARK A+ C
Sbjct: 2  TCSAVQLSPCLAAITKNTPPSAACCNKLKEQKPCLCGYLKDPNLKNYVNSPGARKTASSC 61

Query: 93 G 94
          G
Sbjct: 62 G 62

[Close]

BLAST of Tan0008042 vs. ExPASy Swiss-Prot
Match: P20145 (Probable non-specific lipid-transfer protein OS=Hordeum vulgare OX=4513 GN=LTP2 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.0e-12
Identity = 33/85 (38.82%), Postives = 50/85 (58.82%), Query Frame = 0


Query: 15  IIIAVILVMREAMVEAAVTCNPLQMSPCVSAIISSTPPSKLCCAKIKEQKPCLCDYLKNP 74
           +++ V+ +   A   A   C P Q++ C SAI+  T PS  CC  ++ Q+ CLC Y+K+P
Sbjct: 18  MMVMVVTLAAGADAGAGAACEPAQLAVCASAILGGTKPSGECCGNLRAQQGCLCQYVKDP 77

Query: 75  SLRNFVDSPNARKVANDCGTPFPTC 100
           +  ++V SP+AR   N CG P P C
Sbjct: 78  NYGHYVSSPHARDTLNLCGIPVPHC 102

[Close]

BLAST of Tan0008042 vs. ExPASy Swiss-Prot
Match: A2XBN5 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=LTP-2 PE=3 SV=2)

HSP 1 Score: 67.0 bits (162), Expect = 1.4e-10
Identity = 32/89 (35.96%), Postives = 47/89 (52.81%), Query Frame = 0


Query: 20  ILVMREAMVE---------AAVTCNPLQMSPCVSAIISSTPPSKLCCAKIKEQKPCLCDY 79
           +LV+  AMV          A  +CN  Q++ C  AI     P+  CC+ ++ Q+ C C +
Sbjct: 7   VLVLAVAMVAACGGGVVGVAGASCNAGQLTVCAGAIAGGARPTAACCSSLRAQQGCFCQF 66

Query: 80  LKNPSLRNFVDSPNARKVANDCGTPFPTC 100
            K+P    +V+SPNARK  + CG   PTC
Sbjct: 67  AKDPRYGRYVNSPNARKAVSSCGIALPTC 95

[Close]

BLAST of Tan0008042 vs. NCBI nr
Match: XP_022933706.1 (non-specific lipid-transfer protein 2-like [Cucurbita moschata] >XP_023001764.1 non-specific lipid-transfer protein 2 [Cucurbita maxima] >KAG7021625.1 hypothetical protein SDJN02_15351, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 154.8 bits (390), Expect = 4.0e-34
Identity = 81/98 (82.65%), Postives = 85/98 (86.73%), Query Frame = 0


Query: 5   LSISWVGKLAIIIAVILVMRE---AMVEAAVTCNPLQMSPCVSAIISSTPPSKLCCAKIK 64
           +  SWV  L  IIAVIL+      AMVE AVTCNP+QMSPC+SAIISSTPPSKLCCAKIK
Sbjct: 1   MKASWVAILT-IIAVILMSESNEMAMVE-AVTCNPMQMSPCISAIISSTPPSKLCCAKIK 60

Query: 65  EQKPCLCDYLKNPSLRNFVDSPNARKVANDCGTPFPTC 100
           EQKPCLCDYLKNPSLRNFVDSPNARKVANDCGTPFPTC
Sbjct: 61  EQKPCLCDYLKNPSLRNFVDSPNARKVANDCGTPFPTC 96

[Close]

BLAST of Tan0008042 vs. NCBI nr
Match: XP_023530164.1 (non-specific lipid-transfer protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 153.7 bits (387), Expect = 8.8e-34
Identity = 75/96 (78.12%), Postives = 81/96 (84.38%), Query Frame = 0


Query: 5   LSISWVGKLAIIIAVILVMREAMVEA-AVTCNPLQMSPCVSAIISSTPPSKLCCAKIKEQ 64
           +  SWV  L II  +++     MV   AVTCNP+QMSPC+SAIISSTPPSKLCCAKIKEQ
Sbjct: 1   MKASWVAILTIIAVILMSESNEMVMVEAVTCNPMQMSPCISAIISSTPPSKLCCAKIKEQ 60

Query: 65  KPCLCDYLKNPSLRNFVDSPNARKVANDCGTPFPTC 100
           KPCLCDYLKNPSLRNFVDSPNARKVANDCGTPFPTC
Sbjct: 61  KPCLCDYLKNPSLRNFVDSPNARKVANDCGTPFPTC 96

[Close]

BLAST of Tan0008042 vs. NCBI nr
Match: KAG6587662.1 (L-Ala-D/L-amino acid epimerase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 151.0 bits (380), Expect = 5.7e-33
Identity = 71/74 (95.95%), Postives = 73/74 (98.65%), Query Frame = 0


Query: 26  AMVEAAVTCNPLQMSPCVSAIISSTPPSKLCCAKIKEQKPCLCDYLKNPSLRNFVDSPNA 85
           AMVE AVTCNP+QMSPC+SAIISSTPPSKLCCAKIKEQKPCLCDYLKNPSLRNFVDSPNA
Sbjct: 482 AMVE-AVTCNPMQMSPCISAIISSTPPSKLCCAKIKEQKPCLCDYLKNPSLRNFVDSPNA 541

Query: 86  RKVANDCGTPFPTC 100
           RKVANDCGTPFPTC
Sbjct: 542 RKVANDCGTPFPTC 554

[Close]

BLAST of Tan0008042 vs. NCBI nr
Match: XP_022135324.1 (non-specific lipid-transfer protein 2 [Momordica charantia])

HSP 1 Score: 134.4 bits (337), Expect = 5.5e-28
Identity = 66/87 (75.86%), Postives = 76/87 (87.36%), Query Frame = 0


Query: 13  LAIIIAVILVMREAMVEAAVTCNPLQMSPCVSAIISSTPPSKLCCAKIKEQKPCLCDYLK 72
           LAI++AV+ V     V  AVTC+P+QMSPCV AIISS+PPS LCC+KIKEQKPCLC YLK
Sbjct: 8   LAILVAVV-VAGVVEVGWAVTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLK 67

Query: 73  NPSLRNFVDSPNARKVANDCGTPFPTC 100
           NPSLR+FVDSPNAR+VA+DCGTPFPTC
Sbjct: 68  NPSLRSFVDSPNARRVASDCGTPFPTC 93

[Close]

BLAST of Tan0008042 vs. NCBI nr
Match: XP_014507024.1 (non-specific lipid-transfer protein 2 [Vigna radiata var. radiata])

HSP 1 Score: 130.6 bits (327), Expect = 8.0e-27
Identity = 60/87 (68.97%), Postives = 73/87 (83.91%), Query Frame = 0


Query: 13  LAIIIAVILVMREAMVEAAVTCNPLQMSPCVSAIISSTPPSKLCCAKIKEQKPCLCDYLK 72
           +A+   V+L++ E  V  AVTC+P+Q+S CVSAI SSTPPSKLCC+KIKEQKPCLC Y+K
Sbjct: 6   IALCTLVVLLVAEVQVSMAVTCSPVQLSSCVSAITSSTPPSKLCCSKIKEQKPCLCQYVK 65

Query: 73  NPSLRNFVDSPNARKVANDCGTPFPTC 100
           NP+L+ FVDSPNARKVA+ CGTPFP C
Sbjct: 66  NPNLKKFVDSPNARKVASTCGTPFPRC 92

[Close]

BLAST of Tan0008042 vs. ExPASy TrEMBL
Match: A0A6J1KNL1 (non-specific lipid-transfer protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111495805 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.9e-34
Identity = 81/98 (82.65%), Postives = 85/98 (86.73%), Query Frame = 0


Query: 5   LSISWVGKLAIIIAVILVMRE---AMVEAAVTCNPLQMSPCVSAIISSTPPSKLCCAKIK 64
           +  SWV  L  IIAVIL+      AMVE AVTCNP+QMSPC+SAIISSTPPSKLCCAKIK
Sbjct: 1   MKASWVAILT-IIAVILMSESNEMAMVE-AVTCNPMQMSPCISAIISSTPPSKLCCAKIK 60

Query: 65  EQKPCLCDYLKNPSLRNFVDSPNARKVANDCGTPFPTC 100
           EQKPCLCDYLKNPSLRNFVDSPNARKVANDCGTPFPTC
Sbjct: 61  EQKPCLCDYLKNPSLRNFVDSPNARKVANDCGTPFPTC 96

[Close]

BLAST of Tan0008042 vs. ExPASy TrEMBL
Match: A0A6J1EZT8 (non-specific lipid-transfer protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111441043 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.9e-34
Identity = 81/98 (82.65%), Postives = 85/98 (86.73%), Query Frame = 0


Query: 5   LSISWVGKLAIIIAVILVMRE---AMVEAAVTCNPLQMSPCVSAIISSTPPSKLCCAKIK 64
           +  SWV  L  IIAVIL+      AMVE AVTCNP+QMSPC+SAIISSTPPSKLCCAKIK
Sbjct: 1   MKASWVAILT-IIAVILMSESNEMAMVE-AVTCNPMQMSPCISAIISSTPPSKLCCAKIK 60

Query: 65  EQKPCLCDYLKNPSLRNFVDSPNARKVANDCGTPFPTC 100
           EQKPCLCDYLKNPSLRNFVDSPNARKVANDCGTPFPTC
Sbjct: 61  EQKPCLCDYLKNPSLRNFVDSPNARKVANDCGTPFPTC 96

[Close]

BLAST of Tan0008042 vs. ExPASy TrEMBL
Match: A0A6J1C151 (non-specific lipid-transfer protein 2 OS=Momordica charantia OX=3673 GN=LOC111007315 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.7e-28
Identity = 66/87 (75.86%), Postives = 76/87 (87.36%), Query Frame = 0


Query: 13  LAIIIAVILVMREAMVEAAVTCNPLQMSPCVSAIISSTPPSKLCCAKIKEQKPCLCDYLK 72
           LAI++AV+ V     V  AVTC+P+QMSPCV AIISS+PPS LCC+KIKEQKPCLC YLK
Sbjct: 8   LAILVAVV-VAGVVEVGWAVTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLK 67

Query: 73  NPSLRNFVDSPNARKVANDCGTPFPTC 100
           NPSLR+FVDSPNAR+VA+DCGTPFPTC
Sbjct: 68  NPSLRSFVDSPNARRVASDCGTPFPTC 93

[Close]

BLAST of Tan0008042 vs. ExPASy TrEMBL
Match: A0A1S3UM47 (non-specific lipid-transfer protein 2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106766780 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.9e-27
Identity = 60/87 (68.97%), Postives = 73/87 (83.91%), Query Frame = 0


Query: 13  LAIIIAVILVMREAMVEAAVTCNPLQMSPCVSAIISSTPPSKLCCAKIKEQKPCLCDYLK 72
           +A+   V+L++ E  V  AVTC+P+Q+S CVSAI SSTPPSKLCC+KIKEQKPCLC Y+K
Sbjct: 6   IALCTLVVLLVAEVQVSMAVTCSPVQLSSCVSAITSSTPPSKLCCSKIKEQKPCLCQYVK 65

Query: 73  NPSLRNFVDSPNARKVANDCGTPFPTC 100
           NP+L+ FVDSPNARKVA+ CGTPFP C
Sbjct: 66  NPNLKKFVDSPNARKVASTCGTPFPRC 92

[Close]

BLAST of Tan0008042 vs. ExPASy TrEMBL
Match: I1KJ10 (AAI domain-containing protein OS=Glycine max OX=3847 GN=GLYMA_07G096700 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 6.6e-27
Identity = 59/83 (71.08%), Postives = 69/83 (83.13%), Query Frame = 0


Query: 17  IAVILVMREAMVEAAVTCNPLQMSPCVSAIISSTPPSKLCCAKIKEQKPCLCDYLKNPSL 76
           + V+L + E  V  AVTC+P+Q+S CVSAI SSTPPS LCC+KIKEQKPCLC YLKNP+L
Sbjct: 11  LVVLLFVAEVQVSKAVTCSPVQLSACVSAITSSTPPSNLCCSKIKEQKPCLCQYLKNPNL 70

Query: 77  RNFVDSPNARKVANDCGTPFPTC 100
           + FVDSPNAR+VAN CGTPFP C
Sbjct: 71  KKFVDSPNARRVANTCGTPFPRC 93

[Close]

BLAST of Tan0008042 vs. TAIR 10
Match: AT3G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 112.5 bits (280), Expect = 2.1e-25
Identity = 50/83 (60.24%), Postives = 64/83 (77.11%), Query Frame = 0


Query: 17  IAVILVMREAMVEAAVTCNPLQMSPCVSAIISSTPPSKLCCAKIKEQKPCLCDYLKNPSL 76
           +A +L+M  A    AVTC+P+Q+SPC +AI SS+PPS LCCAK+KEQ+PCLC Y++NPSL
Sbjct: 14  LAAVLLMILAPAAEAVTCSPMQLSPCATAITSSSPPSALCCAKLKEQRPCLCGYMRNPSL 73

Query: 77  RNFVDSPNARKVANDCGTPFPTC 100
           R FV +PNARKV+  C  P P C
Sbjct: 74  RRFVSTPNARKVSKSCKLPIPRC 96

[Close]

BLAST of Tan0008042 vs. TAIR 10
Match: AT1G48750.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 104.4 bits (259), Expect = 5.7e-23
Identity = 46/95 (48.42%), Postives = 69/95 (72.63%), Query Frame = 0


Query: 5   LSISWVGKLAIIIAVILVMREAMVEAAVTCNPLQMSPCVSAIISSTPPSKLCCAKIKEQK 64
           + + WV  LA+  A++L+     V   VTC+P+Q++ C +A+ SS+PPS+ CC K++EQ+
Sbjct: 2   VKVMWVSVLALAAAILLL--TVPVAEGVTCSPMQLASCAAAMTSSSPPSEACCTKLREQQ 61

Query: 65  PCLCDYLKNPSLRNFVDSPNARKVANDCGTPFPTC 100
           PCLC Y++NP+LR +V SPNARKV+N C  P P+C
Sbjct: 62  PCLCGYMRNPTLRQYVSSPNARKVSNSCKIPSPSC 94

[Close]

BLAST of Tan0008042 vs. TAIR 10
Match: AT1G73780.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 97.8 bits (242), Expect = 5.4e-21
Identity = 40/84 (47.62%), Postives = 61/84 (72.62%), Query Frame = 0


Query: 16  IIAVILVMREAMVEAAVTCNPLQMSPCVSAIISSTPPSKLCCAKIKEQKPCLCDYLKNPS 75
           I+ +++V +E  V A   CNP Q+SPC+  I+  + PS LCC+K+KEQ+ C+C YLKNP+
Sbjct: 15  ILLILIVAQENRVAAVDPCNPAQLSPCLETIMKGSEPSDLCCSKVKEQQHCICQYLKNPN 74

Query: 76  LRNFVDSPNARKVANDCGTPFPTC 100
            ++F++SPNA+ +A DC  P+P C
Sbjct: 75  FKSFLNSPNAKIIATDCHCPYPKC 98

[Close]

BLAST of Tan0008042 vs. TAIR 10
Match: AT5G38170.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 85.5 bits (210), Expect = 2.8e-17
Identity = 34/71 (47.89%), Postives = 48/71 (67.61%), Query Frame = 0


Query: 29  EAAVTCNPLQMSPCVSAIISSTPPSKLCCAKIKEQKPCLCDYLKNPSLRNFVDSPNARKV 88
           EA VTC+ +Q+S C + +++  PPS  CC K+KEQ+PC C Y+K+P    +V S NA+K 
Sbjct: 33  EADVTCDAVQLSSCATPMLTGVPPSTECCGKLKEQQPCFCTYIKDPRYSQYVGSANAKKT 92

Query: 89  ANDCGTPFPTC 100
              CG P+PTC
Sbjct: 93  LATCGVPYPTC 103

[Close]

BLAST of Tan0008042 vs. TAIR 10
Match: AT5G38160.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 79.7 bits (195), Expect = 1.5e-15
Identity = 35/78 (44.87%), Postives = 50/78 (64.10%), Query Frame = 0


Query: 22  VMREAMVEAAVTCNPLQMSPCVSAIISSTPPSKLCCAKIKEQKPCLCDYLKNPSLRNFVD 81
           V++ +  E  VTC+  Q+S CV+A+ +  PPS  CC K+KE + CLC Y++NP   ++V 
Sbjct: 26  VVKGSGEEVNVTCDATQLSSCVTAVSTGAPPSTDCCGKLKEHETCLCTYIQNPLYSSYVT 85

Query: 82  SPNARKVANDCGTPFPTC 100
           SPNARK    C   +PTC
Sbjct: 86  SPNARKTLAACDVAYPTC 103

The following BLAST results are available for this feature:

BLAST of Tan0008042 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P82353	2.0e-20	60.29	Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1	[more]
Q43681	2.9e-19	44.44	Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 ...	[more]
P86809	1.9e-18	62.30	Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=27811...	[more]
P20145	2.0e-12	38.82	Probable non-specific lipid-transfer protein OS=Hordeum vulgare OX=4513 GN=LTP2 ...	[more]
A2XBN5	1.4e-10	35.96	Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]

BLAST of Tan0008042 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933706.1	4.0e-34	82.65	non-specific lipid-transfer protein 2-like [Cucurbita moschata] >XP_023001764.1 ...	[more]
XP_023530164.1	8.8e-34	78.13	non-specific lipid-transfer protein 2-like [Cucurbita pepo subsp. pepo]	[more]
KAG6587662.1	5.7e-33	95.95	L-Ala-D/L-amino acid epimerase, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022135324.1	5.5e-28	75.86	non-specific lipid-transfer protein 2 [Momordica charantia]	[more]
XP_014507024.1	8.0e-27	68.97	non-specific lipid-transfer protein 2 [Vigna radiata var. radiata]	[more]

BLAST of Tan0008042 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KNL1	1.9e-34	82.65	non-specific lipid-transfer protein 2 OS=Cucurbita maxima OX=3661 GN=LOC11149580...	[more]
A0A6J1EZT8	1.9e-34	82.65	non-specific lipid-transfer protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1C151	2.7e-28	75.86	non-specific lipid-transfer protein 2 OS=Momordica charantia OX=3673 GN=LOC11100...	[more]
A0A1S3UM47	3.9e-27	68.97	non-specific lipid-transfer protein 2 OS=Vigna radiata var. radiata OX=3916 GN=L...	[more]
I1KJ10	6.6e-27	71.08	AAI domain-containing protein OS=Glycine max OX=3847 GN=GLYMA_07G096700 PE=4 SV=...	[more]

BLAST of Tan0008042 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18280.1	2.1e-25	60.24	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G48750.1	5.7e-23	48.42	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G73780.1	5.4e-21	47.62	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G38170.1	2.8e-17	47.89	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G38160.1	1.5e-15	44.87	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 27..96 e-value: 2.5E-7 score: 30.8
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 32..100 e-value: 3.1E-24 score: 87.0
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 33..99
None	No IPR available	PANTHER	PTHR33214:SF30	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 14..99
IPR033872	Non-specific lipid-transfer protein type 2	PANTHER	PTHR33214	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 14..99
IPR033872	Non-specific lipid-transfer protein type 2	CDD	cd01959	nsLTP2	coord: 34..99 e-value: 1.55308E-29 score: 98.925

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0008042.1	Tan0008042.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport