Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAATAATCCAGCCGTTTCGATCCGACCAAAATCAAACGGAGCAAACAGCTTCATCATTCACGTGACGGATGATCGAGAGGAGTACAGAGGAGGAAACTCCGTCGTAAGCATCTCTCCGGCGAGGATTCTGAGCCGGATCCGCCGGATTCTGATGCGATTCATATTCTATTTTCCTTCTCGAGGTTCTTCGTCCTCCTCGTCGTCGGCAATAATGGCGTCGAAGCAGAGAAATCTGGAGAAGTTCGAGCCGCCGAAGACTTCCTGTAGTTCGAATTACTCGTCGTACTCGCATTACAACGAAGCTATCGCCGATTGTATCGAGTTCTTCAACAAGTCGTCGCAGGATCAAAACGGCGTCGTCGAAGGCAGAATCTCCGATGAAAATGCGATGGTATGA
mRNA sequence
ATGGAGAATAATCCAGCCGTTTCGATCCGACCAAAATCAAACGGAGCAAACAGCTTCATCATTCACGTGACGGATGATCGAGAGGAGTACAGAGGAGGAAACTCCGTCGTAAGCATCTCTCCGGCGAGGATTCTGAGCCGGATCCGCCGGATTCTGATGCGATTCATATTCTATTTTCCTTCTCGAGGTTCTTCGTCCTCCTCGTCGTCGGCAATAATGGCGTCGAAGCAGAGAAATCTGGAGAAGTTCGAGCCGCCGAAGACTTCCTGTAGTTCGAATTACTCGTCGTACTCGCATTACAACGAAGCTATCGCCGATTGTATCGAGTTCTTCAACAAGTCGTCGCAGGATCAAAACGGCGTCGTCGAAGGCAGAATCTCCGATGAAAATGCGATGGTATGA
Coding sequence (CDS)
ATGGAGAATAATCCAGCCGTTTCGATCCGACCAAAATCAAACGGAGCAAACAGCTTCATCATTCACGTGACGGATGATCGAGAGGAGTACAGAGGAGGAAACTCCGTCGTAAGCATCTCTCCGGCGAGGATTCTGAGCCGGATCCGCCGGATTCTGATGCGATTCATATTCTATTTTCCTTCTCGAGGTTCTTCGTCCTCCTCGTCGTCGGCAATAATGGCGTCGAAGCAGAGAAATCTGGAGAAGTTCGAGCCGCCGAAGACTTCCTGTAGTTCGAATTACTCGTCGTACTCGCATTACAACGAAGCTATCGCCGATTGTATCGAGTTCTTCAACAAGTCGTCGCAGGATCAAAACGGCGTCGTCGAAGGCAGAATCTCCGATGAAAATGCGATGGTATGA
Protein sequence
MENNPAVSIRPKSNGANSFIIHVTDDREEYRGGNSVVSISPARILSRIRRILMRFIFYFPSRGSSSSSSSAIMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQNGVVEGRISDENAMV
Homology
BLAST of Tan0008004 vs. NCBI nr
Match:
XP_022996993.1 (uncharacterized protein LOC111492057 [Cucurbita maxima])
HSP 1 Score: 214.5 bits (545), Expect = 5.4e-52
Identity = 113/133 (84.96%), Postives = 119/133 (89.47%), Query Frame = 0
Query: 1 MENNPAVSIRPKSNGANSFIIHVTDDREEYRGGNSVVSISPARILSRIRRILMRFIFYFP 60
ME NPAVSIRPKSNGANSFII+V DD+E+YRGG+ VSISP R LSRIRRILMRF+FYFP
Sbjct: 1 MEKNPAVSIRPKSNGANSFIINVEDDQEDYRGGSPGVSISPVRFLSRIRRILMRFMFYFP 60
Query: 61 SRGSSSSSSSAIMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQNG 120
SRGSSSS SS+IMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQ G
Sbjct: 61 SRGSSSSPSSSIMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQIG 120
Query: 121 VVEGRISDENAMV 134
ISD NAMV
Sbjct: 121 -----ISDANAMV 128
BLAST of Tan0008004 vs. NCBI nr
Match:
KAG7029433.1 (hypothetical protein SDJN02_07772, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 211.5 bits (537), Expect = 4.6e-51
Identity = 112/133 (84.21%), Postives = 119/133 (89.47%), Query Frame = 0
Query: 1 MENNPAVSIRPKSNGANSFIIHVTDDREEYRGGNSVVSISPARILSRIRRILMRFIFYFP 60
ME NPAVSIR KSNGANSFII+V DD+E+YRGG+ VSISPAR LSRIRRILMRF+FYFP
Sbjct: 1 MEKNPAVSIRQKSNGANSFIINVEDDQEDYRGGSPGVSISPARFLSRIRRILMRFMFYFP 60
Query: 61 SRGSSSSSSSAIMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQNG 120
SRGSS SSSS+IMASK+RNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQ G
Sbjct: 61 SRGSSPSSSSSIMASKRRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQIG 120
Query: 121 VVEGRISDENAMV 134
ISD NAMV
Sbjct: 121 -----ISDANAMV 128
BLAST of Tan0008004 vs. NCBI nr
Match:
KAG6598497.1 (hypothetical protein SDJN03_08275, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 211.5 bits (537), Expect = 4.6e-51
Identity = 112/133 (84.21%), Postives = 119/133 (89.47%), Query Frame = 0
Query: 1 MENNPAVSIRPKSNGANSFIIHVTDDREEYRGGNSVVSISPARILSRIRRILMRFIFYFP 60
ME NPAVSIR KSNGANSFII+V DD+E++RGG+ VSISPAR LSRIRRILMRF+FYFP
Sbjct: 1 MEKNPAVSIRQKSNGANSFIINVEDDQEDFRGGSPGVSISPARFLSRIRRILMRFMFYFP 60
Query: 61 SRGSSSSSSSAIMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQNG 120
SRGSS SSSS+IMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQ G
Sbjct: 61 SRGSSPSSSSSIMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQIG 120
Query: 121 VVEGRISDENAMV 134
ISD NAMV
Sbjct: 121 -----ISDANAMV 128
BLAST of Tan0008004 vs. NCBI nr
Match:
KAA0065168.1 (hypothetical protein E6C27_scaffold82G005050 [Cucumis melo var. makuwa])
HSP 1 Score: 202.2 bits (513), Expect = 2.8e-48
Identity = 102/132 (77.27%), Postives = 117/132 (88.64%), Query Frame = 0
Query: 4 NPAVSIRPKSNGANSFIIHVTDDREEYRGGNSVVSISPARILSRIRRILMRFIFYFPSRG 63
NPAVS RPKSNGAN+F+IHV DD+++YRGG+ ISPARI+SRIRR+LMRFIFY PSRG
Sbjct: 3 NPAVSTRPKSNGANTFVIHVKDDQDDYRGGSPAPRISPARIMSRIRRVLMRFIFYLPSRG 62
Query: 64 SSSSSSSA--IMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQNGV 123
SS+++++A A KQ+NLEKFEPPKTSCSS+YSSYSHYNEAIADCIEFFNKSSQDQ GV
Sbjct: 63 SSAAAAAAGPFTALKQKNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFFNKSSQDQIGV 122
Query: 124 VEGRISDENAMV 134
EGRISD NAMV
Sbjct: 123 DEGRISDANAMV 134
BLAST of Tan0008004 vs. NCBI nr
Match:
KAE8652124.1 (hypothetical protein Csa_022629 [Cucumis sativus])
HSP 1 Score: 198.7 bits (504), Expect = 3.1e-47
Identity = 99/129 (76.74%), Postives = 114/129 (88.37%), Query Frame = 0
Query: 4 NPAVSIRPKSNGANSFIIHVTDDREEYRGGNSVVSISPARILSRIRRILMRFIFYFPSRG 63
NPAVS RPKSNGANSF++HV DD+++YRGG+ ISPARILSRIRR+ MRFIFY PSRG
Sbjct: 3 NPAVSTRPKSNGANSFVVHVKDDQDDYRGGSPAERISPARILSRIRRVFMRFIFYLPSRG 62
Query: 64 SSSSSSSAIMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQNGVVE 123
S++++++A+ KQRNLEKFEPPKTSCSS+YSSYSHYNEAIADCIEF NKSSQDQ GV E
Sbjct: 63 SAAAAAAAL---KQRNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFLNKSSQDQIGVDE 122
Query: 124 GRISDENAM 133
GRISD NAM
Sbjct: 123 GRISDANAM 128
BLAST of Tan0008004 vs. ExPASy TrEMBL
Match:
A0A6J1KCK5 (uncharacterized protein LOC111492057 OS=Cucurbita maxima OX=3661 GN=LOC111492057 PE=4 SV=1)
HSP 1 Score: 214.5 bits (545), Expect = 2.6e-52
Identity = 113/133 (84.96%), Postives = 119/133 (89.47%), Query Frame = 0
Query: 1 MENNPAVSIRPKSNGANSFIIHVTDDREEYRGGNSVVSISPARILSRIRRILMRFIFYFP 60
ME NPAVSIRPKSNGANSFII+V DD+E+YRGG+ VSISP R LSRIRRILMRF+FYFP
Sbjct: 1 MEKNPAVSIRPKSNGANSFIINVEDDQEDYRGGSPGVSISPVRFLSRIRRILMRFMFYFP 60
Query: 61 SRGSSSSSSSAIMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQNG 120
SRGSSSS SS+IMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQ G
Sbjct: 61 SRGSSSSPSSSIMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQIG 120
Query: 121 VVEGRISDENAMV 134
ISD NAMV
Sbjct: 121 -----ISDANAMV 128
BLAST of Tan0008004 vs. ExPASy TrEMBL
Match:
A0A5A7VC16 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005050 PE=4 SV=1)
HSP 1 Score: 202.2 bits (513), Expect = 1.3e-48
Identity = 102/132 (77.27%), Postives = 117/132 (88.64%), Query Frame = 0
Query: 4 NPAVSIRPKSNGANSFIIHVTDDREEYRGGNSVVSISPARILSRIRRILMRFIFYFPSRG 63
NPAVS RPKSNGAN+F+IHV DD+++YRGG+ ISPARI+SRIRR+LMRFIFY PSRG
Sbjct: 3 NPAVSTRPKSNGANTFVIHVKDDQDDYRGGSPAPRISPARIMSRIRRVLMRFIFYLPSRG 62
Query: 64 SSSSSSSA--IMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQNGV 123
SS+++++A A KQ+NLEKFEPPKTSCSS+YSSYSHYNEAIADCIEFFNKSSQDQ GV
Sbjct: 63 SSAAAAAAGPFTALKQKNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFFNKSSQDQIGV 122
Query: 124 VEGRISDENAMV 134
EGRISD NAMV
Sbjct: 123 DEGRISDANAMV 134
BLAST of Tan0008004 vs. ExPASy TrEMBL
Match:
A0A0A0LPF9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368240 PE=4 SV=1)
HSP 1 Score: 200.3 bits (508), Expect = 5.1e-48
Identity = 100/130 (76.92%), Postives = 115/130 (88.46%), Query Frame = 0
Query: 4 NPAVSIRPKSNGANSFIIHVTDDREEYRGGNSVVSISPARILSRIRRILMRFIFYFPSRG 63
NPAVS RPKSNGANSF++HV DD+++YRGG+ ISPARILSRIRR+ MRFIFY PSRG
Sbjct: 3 NPAVSTRPKSNGANSFVVHVKDDQDDYRGGSPAERISPARILSRIRRVFMRFIFYLPSRG 62
Query: 64 SSSSSSSAIMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQNGVVE 123
S++++++A+ KQRNLEKFEPPKTSCSS+YSSYSHYNEAIADCIEF NKSSQDQ GV E
Sbjct: 63 SAAAAAAAL---KQRNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFLNKSSQDQIGVDE 122
Query: 124 GRISDENAMV 134
GRISD NAMV
Sbjct: 123 GRISDANAMV 129
BLAST of Tan0008004 vs. ExPASy TrEMBL
Match:
A0A6J1CRC4 (uncharacterized protein LOC111014042 OS=Momordica charantia OX=3673 GN=LOC111014042 PE=4 SV=1)
HSP 1 Score: 180.6 bits (457), Expect = 4.2e-42
Identity = 98/130 (75.38%), Postives = 108/130 (83.08%), Query Frame = 0
Query: 4 NPAVSIRPKSNGANSFIIHVTDDREEYRGGNSVVSISPARILSRIRRILMRFIFYFPSRG 63
NP V I K NGA+ F+IHV D+E+YRGG+S VS+SPARILSRIRR+ MRFIFYFPSRG
Sbjct: 6 NPTVPISHKPNGADGFVIHVR-DQEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRG 65
Query: 64 SSSSSSSAIMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQNGVVE 123
SSSS IMAS+QRNLEKFEPPKTSCSSNYSSYSHY+EAIADCIEFFNKSS + V
Sbjct: 66 ---SSSSPIMASRQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCIEFFNKSSLQEQIGVG 125
Query: 124 GRISDENAMV 134
GR SD NAMV
Sbjct: 126 GRNSDGNAMV 131
BLAST of Tan0008004 vs. ExPASy TrEMBL
Match:
A0A1R3HYQ3 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_26156 PE=4 SV=1)
HSP 1 Score: 113.2 bits (282), Expect = 8.2e-22
Identity = 65/118 (55.08%), Postives = 85/118 (72.03%), Query Frame = 0
Query: 18 SFIIHVTDDREEYRGGNSV----VSISPARILSRIRRILMRFIFYFPS--RGSSSSSSSA 77
SF+I +++ E + N+V ++S ++ +R R+ILMRFIF PS R S SSSSS
Sbjct: 11 SFVIQISETLEAGQAANTVSPKFTNLSSMKLFNRFRKILMRFIFSIPSPRRSSGSSSSSM 70
Query: 78 IMASKQRN-LEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQNGVVEGRISD 129
SKQ+N +KF+PPKTSCSS YSS SHY+EAIADCIEFFNKSSQ+ G+++GR SD
Sbjct: 71 AAGSKQKNYCDKFDPPKTSCSSYYSSQSHYSEAIADCIEFFNKSSQE--GILDGRKSD 126
BLAST of Tan0008004 vs. TAIR 10
Match:
AT1G75717.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 61.6 bits (148), Expect = 5.4e-10
Identity = 38/74 (51.35%), Postives = 50/74 (67.57%), Query Frame = 0
Query: 43 RILSRIRRILMRFIFYFPSRGSSSSSSSAIMASKQRNLEKFEPPKTSCSSN-YSSYSHYN 102
++ ++ +ILMR I + SSS S+ + E+FEPPK SCSS+ YSS+ HY+
Sbjct: 2 KLFHKLGKILMRLIDF---TLHSSSRRQKKNNSRSGDGERFEPPKISCSSSYYSSHVHYS 61
Query: 103 EAIADCIEFFNKSS 116
EAIADCIEFFNKSS
Sbjct: 62 EAIADCIEFFNKSS 72
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| XP_022996993.1 | 5.4e-52 | 84.96 | uncharacterized protein LOC111492057 [Cucurbita maxima] | [more] |
| KAG7029433.1 | 4.6e-51 | 84.21 | hypothetical protein SDJN02_07772, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| KAG6598497.1 | 4.6e-51 | 84.21 | hypothetical protein SDJN03_08275, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KAA0065168.1 | 2.8e-48 | 77.27 | hypothetical protein E6C27_scaffold82G005050 [Cucumis melo var. makuwa] | [more] |
| KAE8652124.1 | 3.1e-47 | 76.74 | hypothetical protein Csa_022629 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1KCK5 | 2.6e-52 | 84.96 | uncharacterized protein LOC111492057 OS=Cucurbita maxima OX=3661 GN=LOC111492057... | [more] |
| A0A5A7VC16 | 1.3e-48 | 77.27 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A0A0LPF9 | 5.1e-48 | 76.92 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368240 PE=4 SV=1 | [more] |
| A0A6J1CRC4 | 4.2e-42 | 75.38 | uncharacterized protein LOC111014042 OS=Momordica charantia OX=3673 GN=LOC111014... | [more] |
| A0A1R3HYQ3 | 8.2e-22 | 55.08 | Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_26156 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G75717.1 | 5.4e-10 | 51.35 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
