Tan0007995 (gene) Snake gourd v1

Overview


Name	Tan0007995
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	RING-type domain-containing protein
Location	LG02: 91958876 .. 91959382 (+)
RNA-Seq Expression	Tan0007995
Synteny	Tan0007995

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCTCCGCCGCACCTCCTTCCTCCGCCTCCGCCTCCCCCGCCGGCGTCGGTCTCGGCTACGGCATTGCCATCGCCGTCAGCATCCTTGTCTTCATCTCCACCATCATGCTCATCTCCTACGCCTGTATTCGCGTCAAATCCACTCGCCCTCGCCCTCGCCCTAGACCTTCCTCCGCCTCTCAACTCCCTCTCCCTCCTCCCTCCGCCGACAATGTCGTGGTTCTCATGGTCGGATTGGACGGCTCCATCATCGAATCTTACCCTAAGTTGGTCCTTGGAGAGAGCCGCCGTCTTCCCGCCCCTAATCACGGCCCTTGCTCCATTTGCCTCTCCGATTACCAACCCAACGATTCTCTCCGATGCATTCCCGATTGCCGCCACTGTTTCCACTCCGATTGCGTCGATGAATGGCTCCGTATGAGCGCCACTTGCCCGCTCTGTCGAAACTCCCCTGCTCCTACTCCTCTCTCCGAGTTCGCGCCTCTGGCTTCCAATGCCAGGTGA

mRNA sequence

ATGTCCTCCGCCGCACCTCCTTCCTCCGCCTCCGCCTCCCCCGCCGGCGTCGGTCTCGGCTACGGCATTGCCATCGCCGTCAGCATCCTTGTCTTCATCTCCACCATCATGCTCATCTCCTACGCCTGTATTCGCGTCAAATCCACTCGCCCTCGCCCTCGCCCTAGACCTTCCTCCGCCTCTCAACTCCCTCTCCCTCCTCCCTCCGCCGACAATGTCGTGGTTCTCATGGTCGGATTGGACGGCTCCATCATCGAATCTTACCCTAAGTTGGTCCTTGGAGAGAGCCGCCGTCTTCCCGCCCCTAATCACGGCCCTTGCTCCATTTGCCTCTCCGATTACCAACCCAACGATTCTCTCCGATGCATTCCCGATTGCCGCCACTGTTTCCACTCCGATTGCGTCGATGAATGGCTCCGTATGAGCGCCACTTGCCCGCTCTGTCGAAACTCCCCTGCTCCTACTCCTCTCTCCGAGTTCGCGCCTCTGGCTTCCAATGCCAGGTGA

Coding sequence (CDS)

ATGTCCTCCGCCGCACCTCCTTCCTCCGCCTCCGCCTCCCCCGCCGGCGTCGGTCTCGGCTACGGCATTGCCATCGCCGTCAGCATCCTTGTCTTCATCTCCACCATCATGCTCATCTCCTACGCCTGTATTCGCGTCAAATCCACTCGCCCTCGCCCTCGCCCTAGACCTTCCTCCGCCTCTCAACTCCCTCTCCCTCCTCCCTCCGCCGACAATGTCGTGGTTCTCATGGTCGGATTGGACGGCTCCATCATCGAATCTTACCCTAAGTTGGTCCTTGGAGAGAGCCGCCGTCTTCCCGCCCCTAATCACGGCCCTTGCTCCATTTGCCTCTCCGATTACCAACCCAACGATTCTCTCCGATGCATTCCCGATTGCCGCCACTGTTTCCACTCCGATTGCGTCGATGAATGGCTCCGTATGAGCGCCACTTGCCCGCTCTGTCGAAACTCCCCTGCTCCTACTCCTCTCTCCGAGTTCGCGCCTCTGGCTTCCAATGCCAGGTGA

Protein sequence

MSSAAPPSSASASPAGVGLGYGIAIAVSILVFISTIMLISYACIRVKSTRPRPRPRPSSASQLPLPPPSADNVVVLMVGLDGSIIESYPKLVLGESRRLPAPNHGPCSICLSDYQPNDSLRCIPDCRHCFHSDCVDEWLRMSATCPLCRNSPAPTPLSEFAPLASNAR

Homology

[Close]

BLAST of Tan0007995 vs. ExPASy Swiss-Prot
Match: Q9FL42 (Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana OX=3702 GN=ATL69 PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 9.6e-49
Identity = 106/172 (61.63%), Postives = 124/172 (72.09%), Query Frame = 0


Query: 1   MSSAAPPSSASASPAGVGLGYGIAIAVSILVFISTIMLISYACIRVKSTRPRPRPRPSSA 60
           MS  +PP+S      GVGLGYGIAIAVSILV IS IML SY CIR KST    R   +S 
Sbjct: 1   MSPISPPAS------GVGLGYGIAIAVSILVLISFIMLASYICIRSKST---GRDEATSD 60

Query: 61  SQLPLPPPSADNVVVLMVGLDGSIIESYPKLVLGESRRLPAPNHGPCSICLSDYQPNDSL 120
             L LP P+A+    + +GLD  +IESYP++VLG+SRRLP PN+GPCSICL DY+  + +
Sbjct: 61  VVLDLPSPAAE----VKLGLDRPVIESYPRIVLGDSRRLPRPNNGPCSICLCDYEAREPV 120

Query: 121 RCIPDCRHCFHSDCVDEWLRMSATCPLCRNSPAP----TPLSEFAPLASNAR 169
           RCIP+C HCFH+DCVDEWLR SATCPLCRNSPAP    TPLS+  PLA   R
Sbjct: 121 RCIPECNHCFHTDCVDEWLRTSATCPLCRNSPAPSRLATPLSDLVPLAFQIR 159

[Close]

BLAST of Tan0007995 vs. ExPASy Swiss-Prot
Match: P0CH01 (Putative RING-H2 finger protein ATL21A OS=Arabidopsis thaliana OX=3702 GN=ATL21A PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 5.6e-25
Identity = 50/84 (59.52%), Postives = 63/84 (75.00%), Query Frame = 0


Query: 72  NVVVLMVGLDGSIIESYPKLVLGESRRLPAPNHG-PCSICLSDYQPNDSLRCIPDCRHCF 131
           N V++  GLD SIIESY K  LGESRRLP  N    C ICLS+Y   +++RCIP+C HCF
Sbjct: 284 NEVIVTTGLDESIIESYKKTELGESRRLPGNNDDIVCPICLSEYASKETVRCIPECDHCF 343

Query: 132 HSDCVDEWLRMSATCPLCRNSPAP 155
           HS+C+D WL++  +CPLCRNSP+P
Sbjct: 344 HSECIDVWLKIHGSCPLCRNSPSP 367

[Close]

BLAST of Tan0007995 vs. ExPASy Swiss-Prot
Match: Q9FG21 (Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana OX=3702 GN=ATL71 PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.3e-24
Identity = 63/157 (40.13%), Postives = 87/157 (55.41%), Query Frame = 0


Query: 18  GLGYGIAIAVSILVFISTIMLISYACIR-----VKSTRPRPRPR--------PSSASQLP 77
           GL YGI +++ IL+ I+TI L SY C R       +T PR R R        P    +  
Sbjct: 22  GLAYGIGVSIGILMLITTITLTSYYCTRSHISASPTTTPRTRRRQRESNGTLPPGQERFD 81

Query: 78  LPPPSADNVVVLMVGLDGSIIESYPKLVLGESR-----RLPAPNHGPCSICLSDYQPNDS 137
                +D VVV ++GL   +I+ +PKL   E+R     +  +     CSICL+DY+  D 
Sbjct: 82  FEDDESDTVVVEVLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCCSICLADYKKMDM 141

Query: 138 LRCIPDCRHCFHSDCVDEWLRMSATCPLCRNSPAPTP 157
           +R +PDC H FH +CVD WLR+  TCP+CR SP P+P
Sbjct: 142 IRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPSP 178

[Close]

BLAST of Tan0007995 vs. ExPASy Swiss-Prot
Match: Q8RX29 (RING-H2 finger protein ATL70 OS=Arabidopsis thaliana OX=3702 GN=ATL70 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 6.9e-23
Identity = 66/160 (41.25%), Postives = 90/160 (56.25%), Query Frame = 0


Query: 18  GLGYGIAIAVSILVFISTIMLISYACIRVKSTRPRPRPRPSSASQLPLPPPSADNVVVLM 77
           G  YGI +++ +L+ I+TI L SY C     TR +    PS  +Q         + V++ 
Sbjct: 63  GFRYGIGVSIGVLLLITTITLTSYYC-----TRNQLSSSPSQTNQDSTRIHHHHHHVIID 122

Query: 78  V--GLDGSIIESYPKLVLGESRRLPAPNHGP-----CSICLSDYQPNDSLRCIPDCRHCF 137
           V  GLD   I+SYPK++  E++       GP     C+ICL DY+    LR +PDC H F
Sbjct: 123 VVPGLDEDTIQSYPKILYSEAK-------GPTTASCCAICLGDYKGKHLLRQLPDCNHLF 182

Query: 138 HSDCVDEWLRMSATCPLCRNSPAPTPLS----EFAPLASN 167
           H  C+D WLR++ TCP+CR SP PTPLS    E  PLAS+
Sbjct: 183 HLKCIDTWLRLNPTCPVCRTSPLPTPLSTPLAEVVPLASS 210

[Close]

BLAST of Tan0007995 vs. ExPASy Swiss-Prot
Match: Q9C7E9 (RING-H2 finger protein ATL20 OS=Arabidopsis thaliana OX=3702 GN=ATL20 PE=2 SV=2)

HSP 1 Score: 105.9 bits (263), Expect = 4.5e-22
Identity = 53/122 (43.44%), Postives = 72/122 (59.02%), Query Frame = 0


Query: 30  LVFISTIMLISYACIRVKSTRPRPRPRPSSASQLPLPPPSADNVVVLMVGLDGSIIESYP 89
           L  I  I     A IR+ ++      R  +A+            VV+  GLD S IESY 
Sbjct: 176 LCIIGGITATCIAAIRIYNSERFVNQRRQNAAITARNTTQQPRGVVVTTGLDQSTIESYK 235

Query: 90  KLVLGESRRLPAPNHGPCSICLSDYQPNDSLRCIPDCRHCFHSDCVDEWLRMSATCPLCR 149
           K+ LGESRRLP  N   C ICLS+Y   +++RC+P+C HCFH  C+DEWL++ ++CP+CR
Sbjct: 236 KVELGESRRLPGTNGIICPICLSEYASKETVRCMPECDHCFHVQCIDEWLKIHSSCPVCR 295

Query: 150 NS 152
           NS
Sbjct: 296 NS 297

[Close]

BLAST of Tan0007995 vs. NCBI nr
Match: XP_022997272.1 (putative RING-H2 finger protein ATL69 [Cucurbita maxima])

HSP 1 Score: 289.7 bits (740), Expect = 1.7e-74
Identity = 155/182 (85.16%), Postives = 160/182 (87.91%), Query Frame = 0


Query: 1   MSSAAPP--------SSASASP--AGVGLGYGIAIAVSILVFISTIMLISYACIRVKSTR 60
           MSSA PP        SSA+ASP  AGVGLGYGIAIAVSILVFISTIML+SYACIR KSTR
Sbjct: 1   MSSADPPSSSSSSSSSSAAASPAHAGVGLGYGIAIAVSILVFISTIMLVSYACIRAKSTR 60

Query: 61  PRPRPRPSSASQLPLPPPSADNVVVLMVGLDGSIIESYPKLVLGESRRLPAPNHGPCSIC 120
           PRPRPRPS+    PLPPP+ADNVVVLMVGLDGSIIESYPKLVLGESRRLPAPNHGPCSIC
Sbjct: 61  PRPRPRPSA----PLPPPAADNVVVLMVGLDGSIIESYPKLVLGESRRLPAPNHGPCSIC 120

Query: 121 LSDYQPNDSLRCIPDCRHCFHSDCVDEWLRMSATCPLCRNSPAP----TPLSEFAPLASN 169
           LSDYQP DS+RCIPDCRHCFHS CVDEWLRMSATCPLCRNSPAP    TPLSEFAPLASN
Sbjct: 121 LSDYQPYDSVRCIPDCRHCFHSACVDEWLRMSATCPLCRNSPAPTPVATPLSEFAPLASN 178

[Close]

BLAST of Tan0007995 vs. NCBI nr
Match: KAG6598654.1 (putative RING-H2 finger protein ATL69, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 289.7 bits (740), Expect = 1.7e-74
Identity = 155/182 (85.16%), Postives = 160/182 (87.91%), Query Frame = 0


Query: 1   MSSAAPPSS--------ASASP--AGVGLGYGIAIAVSILVFISTIMLISYACIRVKSTR 60
           MSSA PPSS        A+ASP  AGVGLGYGIAIAVSILVFISTIML+SYACIR KSTR
Sbjct: 1   MSSADPPSSSSSSSSAAAAASPAHAGVGLGYGIAIAVSILVFISTIMLVSYACIRAKSTR 60

Query: 61  PRPRPRPSSASQLPLPPPSADNVVVLMVGLDGSIIESYPKLVLGESRRLPAPNHGPCSIC 120
           PRPRPRPS+    PLPPP+ADNVVVLMVGLDGSIIESYPKLVLGESRRLPAPNHGPCSIC
Sbjct: 61  PRPRPRPSA----PLPPPAADNVVVLMVGLDGSIIESYPKLVLGESRRLPAPNHGPCSIC 120

Query: 121 LSDYQPNDSLRCIPDCRHCFHSDCVDEWLRMSATCPLCRNSPAP----TPLSEFAPLASN 169
           LSDYQP DS+RCIPDCRHCFHS CVDEWLRMSATCPLCRNSPAP    TPLSEFAPLASN
Sbjct: 121 LSDYQPYDSVRCIPDCRHCFHSACVDEWLRMSATCPLCRNSPAPTPVATPLSEFAPLASN 178

[Close]

BLAST of Tan0007995 vs. NCBI nr
Match: KAG7029595.1 (putative RING-H2 finger protein ATL69, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 285.4 bits (729), Expect = 3.1e-73
Identity = 148/173 (85.55%), Postives = 158/173 (91.33%), Query Frame = 0


Query: 2   SSAAPPSSASASP--AGVGLGYGIAIAVSILVFISTIMLISYACIRVKSTRPRPRPRPSS 61
           SS++  ++A+ASP  AGVGLGYGIAIAVSILVFISTIML+SYACIR KSTRPRPRPRP  
Sbjct: 10  SSSSSSAAAAASPAHAGVGLGYGIAIAVSILVFISTIMLVSYACIRAKSTRPRPRPRPRP 69

Query: 62  ASQLPLPPPSADNVVVLMVGLDGSIIESYPKLVLGESRRLPAPNHGPCSICLSDYQPNDS 121
           ++  PLPPP+ADNVVVLMVGLDGSIIESYPKLVLGESRRLPAPNHGPCSICLSDYQP DS
Sbjct: 70  SA--PLPPPAADNVVVLMVGLDGSIIESYPKLVLGESRRLPAPNHGPCSICLSDYQPYDS 129

Query: 122 LRCIPDCRHCFHSDCVDEWLRMSATCPLCRNSPAP----TPLSEFAPLASNAR 169
           +RCIPDCRHCFHS CVDEWLRMSATCPLCRNSPAP    TPLSEFAPLASNAR
Sbjct: 130 VRCIPDCRHCFHSACVDEWLRMSATCPLCRNSPAPTPVATPLSEFAPLASNAR 180

[Close]

BLAST of Tan0007995 vs. NCBI nr
Match: XP_022961745.1 (putative RING-H2 finger protein ATL69 [Cucurbita moschata])

HSP 1 Score: 285.4 bits (729), Expect = 3.1e-73
Identity = 148/173 (85.55%), Postives = 158/173 (91.33%), Query Frame = 0


Query: 2   SSAAPPSSASASP--AGVGLGYGIAIAVSILVFISTIMLISYACIRVKSTRPRPRPRPSS 61
           SS++  ++A+ASP  AGVGLGYGIAIAVSILVFISTIML+SYACIR KSTRPRPRPRP  
Sbjct: 11  SSSSSSAAAAASPAHAGVGLGYGIAIAVSILVFISTIMLVSYACIRAKSTRPRPRPRPRP 70

Query: 62  ASQLPLPPPSADNVVVLMVGLDGSIIESYPKLVLGESRRLPAPNHGPCSICLSDYQPNDS 121
           ++  PLPPP+ADNVVVLMVGLDGSIIESYPKLVLGESRRLPAPNHGPCSICLSDYQP DS
Sbjct: 71  SA--PLPPPAADNVVVLMVGLDGSIIESYPKLVLGESRRLPAPNHGPCSICLSDYQPYDS 130

Query: 122 LRCIPDCRHCFHSDCVDEWLRMSATCPLCRNSPAP----TPLSEFAPLASNAR 169
           +RCIPDCRHCFHS CVDEWLRMSATCPLCRNSPAP    TPLSEFAPLASNAR
Sbjct: 131 VRCIPDCRHCFHSACVDEWLRMSATCPLCRNSPAPTPVATPLSEFAPLASNAR 181

[Close]

BLAST of Tan0007995 vs. NCBI nr
Match: XP_023546361.1 (putative RING-H2 finger protein ATL69 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 283.5 bits (724), Expect = 1.2e-72
Identity = 152/180 (84.44%), Postives = 156/180 (86.67%), Query Frame = 0


Query: 1   MSSAAPPSS------ASASP--AGVGLGYGIAIAVSILVFISTIMLISYACIRVKSTRPR 60
           MSSA PPSS      A+ASP  AGVGLGYGIAIAVSILVFISTIML+SYACIR KSTRPR
Sbjct: 1   MSSADPPSSSSSSAAAAASPAHAGVGLGYGIAIAVSILVFISTIMLVSYACIRAKSTRPR 60

Query: 61  PRPRPSSASQLPLPPPSADNVVVLMVGLDGSIIESYPKLVLGESRRLPAPNHGPCSICLS 120
           PRP        PLPPP+ADNVVVLMVGLDGSIIESYPKLVLGESRRLPAPNHGPCSICLS
Sbjct: 61  PRP------SAPLPPPAADNVVVLMVGLDGSIIESYPKLVLGESRRLPAPNHGPCSICLS 120

Query: 121 DYQPNDSLRCIPDCRHCFHSDCVDEWLRMSATCPLCRNSPAP----TPLSEFAPLASNAR 169
           DYQP DS+RCIPDCRHCFHS CVDEWLRMSATCPLCRNSPAP    TPLSEFAPLASNAR
Sbjct: 121 DYQPYDSVRCIPDCRHCFHSACVDEWLRMSATCPLCRNSPAPTPVATPLSEFAPLASNAR 174

[Close]

BLAST of Tan0007995 vs. ExPASy TrEMBL
Match: A0A6J1K4J2 (putative RING-H2 finger protein ATL69 OS=Cucurbita maxima OX=3661 GN=LOC111492227 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 8.1e-75
Identity = 155/182 (85.16%), Postives = 160/182 (87.91%), Query Frame = 0


Query: 1   MSSAAPP--------SSASASP--AGVGLGYGIAIAVSILVFISTIMLISYACIRVKSTR 60
           MSSA PP        SSA+ASP  AGVGLGYGIAIAVSILVFISTIML+SYACIR KSTR
Sbjct: 1   MSSADPPSSSSSSSSSSAAASPAHAGVGLGYGIAIAVSILVFISTIMLVSYACIRAKSTR 60

Query: 61  PRPRPRPSSASQLPLPPPSADNVVVLMVGLDGSIIESYPKLVLGESRRLPAPNHGPCSIC 120
           PRPRPRPS+    PLPPP+ADNVVVLMVGLDGSIIESYPKLVLGESRRLPAPNHGPCSIC
Sbjct: 61  PRPRPRPSA----PLPPPAADNVVVLMVGLDGSIIESYPKLVLGESRRLPAPNHGPCSIC 120

Query: 121 LSDYQPNDSLRCIPDCRHCFHSDCVDEWLRMSATCPLCRNSPAP----TPLSEFAPLASN 169
           LSDYQP DS+RCIPDCRHCFHS CVDEWLRMSATCPLCRNSPAP    TPLSEFAPLASN
Sbjct: 121 LSDYQPYDSVRCIPDCRHCFHSACVDEWLRMSATCPLCRNSPAPTPVATPLSEFAPLASN 178

[Close]

BLAST of Tan0007995 vs. ExPASy TrEMBL
Match: A0A6J1HD62 (putative RING-H2 finger protein ATL69 OS=Cucurbita moschata OX=3662 GN=LOC111462423 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.5e-73
Identity = 148/173 (85.55%), Postives = 158/173 (91.33%), Query Frame = 0


Query: 2   SSAAPPSSASASP--AGVGLGYGIAIAVSILVFISTIMLISYACIRVKSTRPRPRPRPSS 61
           SS++  ++A+ASP  AGVGLGYGIAIAVSILVFISTIML+SYACIR KSTRPRPRPRP  
Sbjct: 11  SSSSSSAAAAASPAHAGVGLGYGIAIAVSILVFISTIMLVSYACIRAKSTRPRPRPRPRP 70

Query: 62  ASQLPLPPPSADNVVVLMVGLDGSIIESYPKLVLGESRRLPAPNHGPCSICLSDYQPNDS 121
           ++  PLPPP+ADNVVVLMVGLDGSIIESYPKLVLGESRRLPAPNHGPCSICLSDYQP DS
Sbjct: 71  SA--PLPPPAADNVVVLMVGLDGSIIESYPKLVLGESRRLPAPNHGPCSICLSDYQPYDS 130

Query: 122 LRCIPDCRHCFHSDCVDEWLRMSATCPLCRNSPAP----TPLSEFAPLASNAR 169
           +RCIPDCRHCFHS CVDEWLRMSATCPLCRNSPAP    TPLSEFAPLASNAR
Sbjct: 131 VRCIPDCRHCFHSACVDEWLRMSATCPLCRNSPAPTPVATPLSEFAPLASNAR 181

[Close]

BLAST of Tan0007995 vs. ExPASy TrEMBL
Match: A0A1S3BCM0 (putative RING-H2 finger protein ATL69 OS=Cucumis melo OX=3656 GN=LOC103488437 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 4.3e-68
Identity = 144/174 (82.76%), Postives = 153/174 (87.93%), Query Frame = 0


Query: 1   MSSAAPPSSASASPAGVGLGYGIAIAVSILVFISTIMLISYACIRVK-STRPRPRPRPSS 60
           MSSA PPSS +    GVGLGYGIAIAVSILVFIST+MLISYACIRVK STRPRPRP   S
Sbjct: 1   MSSAHPPSSPA---TGVGLGYGIAIAVSILVFISTVMLISYACIRVKSSTRPRPRP---S 60

Query: 61  ASQLPLPP-PSADNVVVLMVGLDGSIIESYPKLVLGESRRLPAPNHGPCSICLSDYQPND 120
           A+ LP PP  + DNVVVLMVGLDGSIIESYPKLVLGESRRLP PN+GPCSICLSDY+P+D
Sbjct: 61  ANSLPSPPAATVDNVVVLMVGLDGSIIESYPKLVLGESRRLPPPNNGPCSICLSDYKPHD 120

Query: 121 SLRCIPDCRHCFHSDCVDEWLRMSATCPLCRNSPAP----TPLSEFAPLASNAR 169
           S+RCIPDCRHCFHSDCVDEWLRMSATCPLCRNSPAP    TPLSEF PLAS+AR
Sbjct: 121 SVRCIPDCRHCFHSDCVDEWLRMSATCPLCRNSPAPTPVATPLSEFVPLASHAR 168

[Close]

BLAST of Tan0007995 vs. ExPASy TrEMBL
Match: A0A5A7V8V8 (Putative RING-H2 finger protein ATL69 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00990 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.8e-67
Identity = 142/174 (81.61%), Postives = 152/174 (87.36%), Query Frame = 0


Query: 1   MSSAAPPSSASASPAGVGLGYGIAIAVSILVFISTIMLISYACIRVK-STRPRPRPRPSS 60
           MSSA PPSS +    GVGLGYGIAIAVSILVFIST+MLISYACIRVK STRPRPRP   +
Sbjct: 1   MSSAHPPSSPA---TGVGLGYGIAIAVSILVFISTVMLISYACIRVKSSTRPRPRP---N 60

Query: 61  ASQLPLPP-PSADNVVVLMVGLDGSIIESYPKLVLGESRRLPAPNHGPCSICLSDYQPND 120
           A+ LP PP  + DNVVVLMVGLDGSI ESYPKLVLGESRRLP PN+GPCSICLSDY+P+D
Sbjct: 61  ANSLPSPPAATVDNVVVLMVGLDGSIFESYPKLVLGESRRLPPPNNGPCSICLSDYKPHD 120

Query: 121 SLRCIPDCRHCFHSDCVDEWLRMSATCPLCRNSPAP----TPLSEFAPLASNAR 169
           S+RCIPDCRHCFHSDCVDEWLRMSATCPLCRNSPAP    TPLSEF PLAS+AR
Sbjct: 121 SVRCIPDCRHCFHSDCVDEWLRMSATCPLCRNSPAPTPVATPLSEFVPLASHAR 168

[Close]

BLAST of Tan0007995 vs. ExPASy TrEMBL
Match: A0A0A0KFY2 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G401350 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 8.4e-64
Identity = 133/172 (77.33%), Postives = 144/172 (83.72%), Query Frame = 0


Query: 1   MSSAAPPSSASASPAGVGLGYGIAIAVSILVFISTIMLISYACIRVKSTRPRPRPRPSSA 60
           MSSA PPSS +    G+GLGYGIAIAVSILVFIST+MLISYACIRVKS   RP      +
Sbjct: 1   MSSAHPPSSPA---TGLGLGYGIAIAVSILVFISTVMLISYACIRVKSATTRP------S 60

Query: 61  SQLPLPPPSADNVVVLMVGLDGSIIESYPKLVLGESRRLPAPNHGPCSICLSDYQPNDSL 120
           + LP PP   DNVVVLMVGL GSIIESYPKLVLGESRRLP PN+GPCSICLSDY+P+DS+
Sbjct: 61  ASLPSPPTPVDNVVVLMVGLHGSIIESYPKLVLGESRRLPPPNNGPCSICLSDYKPHDSV 120

Query: 121 RCIPDCRHCFHSDCVDEWLRMSATCPLCRNSPAP----TPLSEFAPLASNAR 169
           RCIPDCRHCFHSDCVD+WLRMSATCPLCRNSPAP    TPLSE  PLAS+AR
Sbjct: 121 RCIPDCRHCFHSDCVDQWLRMSATCPLCRNSPAPTPLATPLSELVPLASHAR 163

[Close]

BLAST of Tan0007995 vs. TAIR 10
Match: AT5G07040.1 (RING/U-box superfamily protein )

HSP 1 Score: 194.5 bits (493), Expect = 6.8e-50
Identity = 106/172 (61.63%), Postives = 124/172 (72.09%), Query Frame = 0


Query: 1   MSSAAPPSSASASPAGVGLGYGIAIAVSILVFISTIMLISYACIRVKSTRPRPRPRPSSA 60
           MS  +PP+S      GVGLGYGIAIAVSILV IS IML SY CIR KST    R   +S 
Sbjct: 1   MSPISPPAS------GVGLGYGIAIAVSILVLISFIMLASYICIRSKST---GRDEATSD 60

Query: 61  SQLPLPPPSADNVVVLMVGLDGSIIESYPKLVLGESRRLPAPNHGPCSICLSDYQPNDSL 120
             L LP P+A+    + +GLD  +IESYP++VLG+SRRLP PN+GPCSICL DY+  + +
Sbjct: 61  VVLDLPSPAAE----VKLGLDRPVIESYPRIVLGDSRRLPRPNNGPCSICLCDYEAREPV 120

Query: 121 RCIPDCRHCFHSDCVDEWLRMSATCPLCRNSPAP----TPLSEFAPLASNAR 169
           RCIP+C HCFH+DCVDEWLR SATCPLCRNSPAP    TPLS+  PLA   R
Sbjct: 121 RCIPECNHCFHTDCVDEWLRTSATCPLCRNSPAPSRLATPLSDLVPLAFQIR 159

[Close]

BLAST of Tan0007995 vs. TAIR 10
Match: AT5G53110.1 (RING/U-box superfamily protein )

HSP 1 Score: 124.4 bits (311), Expect = 8.6e-29
Identity = 59/136 (43.38%), Postives = 87/136 (63.97%), Query Frame = 0


Query: 17  VGLGYGIAIAVSILVFISTIMLISYACIRVKSTRPRPRPRPSSASQLPLPPPSADNVVVL 76
           + +G GI  A+ +      +     +CI+ +   P P    + A  L        +  V+
Sbjct: 248 IAVGAGIPGALIVFGLFCFVYSKISSCIKRRRLVPTPEINNAQAHYL--------HSSVI 307

Query: 77  MVGLDGSIIESYPKLVLGESRRLPAPNHGPCSICLSDYQPNDSLRCIPDCRHCFHSDCVD 136
           ++GLDG  IESYPK+VLGES+RLP  +   C+ICLS+Y+P ++LR IP C+HCFH+DC+D
Sbjct: 308 VMGLDGPTIESYPKIVLGESKRLPKVDDATCAICLSEYEPKETLRTIPQCQHCFHADCID 367

Query: 137 EWLRMSATCPLCRNSP 153
           EWL+++ TCP+CRNSP
Sbjct: 368 EWLKLNGTCPVCRNSP 375

[Close]

BLAST of Tan0007995 vs. TAIR 10
Match: AT2G46495.1 (RING/U-box superfamily protein )

HSP 1 Score: 115.5 bits (288), Expect = 4.0e-26
Identity = 50/84 (59.52%), Postives = 63/84 (75.00%), Query Frame = 0


Query: 72  NVVVLMVGLDGSIIESYPKLVLGESRRLPAPNHG-PCSICLSDYQPNDSLRCIPDCRHCF 131
           N V++  GLD SIIESY K  LGESRRLP  N    C ICLS+Y   +++RCIP+C HCF
Sbjct: 284 NEVIVTTGLDESIIESYKKTELGESRRLPGNNDDIVCPICLSEYASKETVRCIPECDHCF 343

Query: 132 HSDCVDEWLRMSATCPLCRNSPAP 155
           HS+C+D WL++  +CPLCRNSP+P
Sbjct: 344 HSECIDVWLKIHGSCPLCRNSPSP 367

[Close]

BLAST of Tan0007995 vs. TAIR 10
Match: AT5G06490.1 (RING/U-box superfamily protein )

HSP 1 Score: 114.4 bits (285), Expect = 8.9e-26
Identity = 63/157 (40.13%), Postives = 87/157 (55.41%), Query Frame = 0


Query: 18  GLGYGIAIAVSILVFISTIMLISYACIR-----VKSTRPRPRPR--------PSSASQLP 77
           GL YGI +++ IL+ I+TI L SY C R       +T PR R R        P    +  
Sbjct: 22  GLAYGIGVSIGILMLITTITLTSYYCTRSHISASPTTTPRTRRRQRESNGTLPPGQERFD 81

Query: 78  LPPPSADNVVVLMVGLDGSIIESYPKLVLGESR-----RLPAPNHGPCSICLSDYQPNDS 137
                +D VVV ++GL   +I+ +PKL   E+R     +  +     CSICL+DY+  D 
Sbjct: 82  FEDDESDTVVVEVLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCCSICLADYKKMDM 141

Query: 138 LRCIPDCRHCFHSDCVDEWLRMSATCPLCRNSPAPTP 157
           +R +PDC H FH +CVD WLR+  TCP+CR SP P+P
Sbjct: 142 IRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPSP 178

[Close]

BLAST of Tan0007995 vs. TAIR 10
Match: AT2G35910.1 (RING/U-box superfamily protein )

HSP 1 Score: 108.6 bits (270), Expect = 4.9e-24
Identity = 66/160 (41.25%), Postives = 90/160 (56.25%), Query Frame = 0


Query: 18  GLGYGIAIAVSILVFISTIMLISYACIRVKSTRPRPRPRPSSASQLPLPPPSADNVVVLM 77
           G  YGI +++ +L+ I+TI L SY C     TR +    PS  +Q         + V++ 
Sbjct: 63  GFRYGIGVSIGVLLLITTITLTSYYC-----TRNQLSSSPSQTNQDSTRIHHHHHHVIID 122

Query: 78  V--GLDGSIIESYPKLVLGESRRLPAPNHGP-----CSICLSDYQPNDSLRCIPDCRHCF 137
           V  GLD   I+SYPK++  E++       GP     C+ICL DY+    LR +PDC H F
Sbjct: 123 VVPGLDEDTIQSYPKILYSEAK-------GPTTASCCAICLGDYKGKHLLRQLPDCNHLF 182

Query: 138 HSDCVDEWLRMSATCPLCRNSPAPTPLS----EFAPLASN 167
           H  C+D WLR++ TCP+CR SP PTPLS    E  PLAS+
Sbjct: 183 HLKCIDTWLRLNPTCPVCRTSPLPTPLSTPLAEVVPLASS 210

The following BLAST results are available for this feature:

BLAST of Tan0007995 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FL42	9.6e-49	61.63	Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana OX=3702 GN=ATL69 P...	[more]
P0CH01	5.6e-25	59.52	Putative RING-H2 finger protein ATL21A OS=Arabidopsis thaliana OX=3702 GN=ATL21A...	[more]
Q9FG21	1.3e-24	40.13	Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana OX=3702 GN=ATL71 P...	[more]
Q8RX29	6.9e-23	41.25	RING-H2 finger protein ATL70 OS=Arabidopsis thaliana OX=3702 GN=ATL70 PE=2 SV=1	[more]
Q9C7E9	4.5e-22	43.44	RING-H2 finger protein ATL20 OS=Arabidopsis thaliana OX=3702 GN=ATL20 PE=2 SV=2	[more]

BLAST of Tan0007995 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022997272.1	1.7e-74	85.16	putative RING-H2 finger protein ATL69 [Cucurbita maxima]	[more]
KAG6598654.1	1.7e-74	85.16	putative RING-H2 finger protein ATL69, partial [Cucurbita argyrosperma subsp. so...	[more]
KAG7029595.1	3.1e-73	85.55	putative RING-H2 finger protein ATL69, partial [Cucurbita argyrosperma subsp. ar...	[more]
XP_022961745.1	3.1e-73	85.55	putative RING-H2 finger protein ATL69 [Cucurbita moschata]	[more]
XP_023546361.1	1.2e-72	84.44	putative RING-H2 finger protein ATL69 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Tan0007995 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K4J2	8.1e-75	85.16	putative RING-H2 finger protein ATL69 OS=Cucurbita maxima OX=3661 GN=LOC11149222...	[more]
A0A6J1HD62	1.5e-73	85.55	putative RING-H2 finger protein ATL69 OS=Cucurbita moschata OX=3662 GN=LOC111462...	[more]
A0A1S3BCM0	4.3e-68	82.76	putative RING-H2 finger protein ATL69 OS=Cucumis melo OX=3656 GN=LOC103488437 PE...	[more]
A0A5A7V8V8	2.8e-67	81.61	Putative RING-H2 finger protein ATL69 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A0A0KFY2	8.4e-64	77.33	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G401350 P...	[more]

BLAST of Tan0007995 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07040.1	6.8e-50	61.63	RING/U-box superfamily protein	[more]
AT5G53110.1	8.6e-29	43.38	RING/U-box superfamily protein	[more]
AT2G46495.1	4.0e-26	59.52	RING/U-box superfamily protein	[more]
AT5G06490.1	8.9e-26	40.13	RING/U-box superfamily protein	[more]
AT2G35910.1	4.9e-24	41.25	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 107..148 e-value: 5.1E-5 score: 32.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 107..149 e-value: 1.7E-12 score: 47.4
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 107..149 score: 12.430266
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 74..154 e-value: 9.5E-20 score: 72.1
None	No IPR available	PANTHER	PTHR46279	RING/U-BOX SUPERFAMILY PROTEIN	coord: 20..154
None	No IPR available	PANTHER	PTHR46279:SF19	RING-H2 FINGER PROTEIN ATL69-RELATED	coord: 20..154
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 106..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0007995.1	Tan0007995.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane