![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Tan0007978 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCGATTGACAGTGAAGGCATTCAACATAATTACTTTCAGTTCAACTGATTCGACCTTCTGTAAAACGTGCAGACGATCCAGATTCTTCGAAAAGTATAATTCTCTGAAACCCCGACTTCAAGTTCAATCATCATACATACACAATCGGATCTTAGATCCATCTCGTAGAATTTTCGCAGTGTCCAGTGCTCGATTTTGTTGTTCATTCTTCCAACCCATTTCTTCTTCCTCTAACCTTGCTCCGGTCTAAAATGGCGGCGACGGCGTCTCAGTTTTCGTGCTTATCCGCCTTCAACCGCGGCTTTCGCCTGCAACAGCGCCGTTCATTCTCACTCCCTCGCCCCTCTCTTTCCTTGCCTAAGGTTTCTGTTTCCTTTCGGTATTCTCGTTTCTTATTTCTTTTGGCAGCTCTTTGAATCGGAGATTTGAAGAAAGTTTTGTGAATTTCGATGAATTGAGAGCCTTTCTCGCTTTATGAATCAAATATGAAAACCCTTTTTCTGTTAGCTGGGGATTTGATTTGTTTTGGTTTCTCGGTAGGATAGTTAAATCTTAAATTTGATTTTTTTGCCCCTTCGTTTGAATGTATTAATTCGGATATAGCTTTTTTTGTTCACGTTTCAATTACCTGGTTTAATACTAGTAAGGTCTTGCTGCGGGTTGAATTTTATGGTTCTCTGCTTGAATGTGGTTTTAGCTTTGTTTACTTGTTAGAGATTCCATGGATACTTCATCTGTACCCTTTTTAGTGGTGATTTCTTGAAAGTGCTTGATTCTTGTGCTGTGTTTAAGTAATGCGGTAAGTTAATAGTGCTAAATACAACGAGTGGCATAATCGATTGAGCTGAAGCTTGAATTTTCCTTCTCTAGTTCTCAATTGTTATGAGCCTTGAGGGTTCTGCTTCAAATACTGCTGATTCCCAGACTAAGACAACTTTAAACTACGCTGCTGATGCATCAGAATCTCAAGTTGCCACAAACTCATACCAGGGTGTCGAAAAGTCGTCTGATGTTGGAAATTCGGAGAATGAAAAGCTGCAGGAACCTGCTGATGTTGGCACTGTGCCCATACGAGCAGCAAAAATCCATGATTTCTGTTTTGGCATTCCTTTTGGTGAGTTTCCCATTCTTCCTTTAATGATAGGCTTGTAAGCTGCTTGTAGCAGTTAGAATGCTATATTACAGAAGAAGTGCATCCTCCCTTGCTAATAGTGTTTCTCACAATTGGGCCTCAAATGCATTACATTGAGTAATGATTTATTATGTTAGACATAGCTATTAAGCATACTCTAACCAGATTAAATCCTTACTTCTTTGCGACTGCTTATGATATAAGAAAGGATTAGTACATAAAAAAAATGTTCATTCCGTCTGAAATGTGAATGGTTGATTAGATCGCCAAGACCGAGATGGCATGAGTCATGTGATCCATGAGGATCATAAATAGTATGGACAAGAGAACCTCGCTGGTTGAGGATAATTCTTGTAAGGTATTCTGGTAAAACAGTAATCTTTAAGGAACCCTTTTATGCAACAAAAACAAGAAACATGGACAAAATAGAGAGGTTGTAATTTTTATTCTTCAGTGCCCATTTCCTGTTTTCTTATTCAGAATGAATTTTAGAAAAAAAAAAACTTCTTCCTCAATGGTATTGGAAGAAATTTGACTCAATATGCCTTAGTCTTTCTGGTATGCATAGGCCTTGAAGGAGGAAACTAAATGCCATTTGCTGAACTGTCAATTCGATATGTTCTCCACTTAACAGCCTTAAGGAAACTGTATCGGTTTTTTTTTTTCTTTTCACTGTGCTATGAAGCTGCTGAGTGCCATTGAACTTGTTGGCCTATGACTGTGCTTCAAAGTGAAAGTTTACTAGAGGGAGGGTAGAAATGGAAATGTAACCTTTGAGAGTTAGTTTGGACTGCACATATTTTGTGAGAGTTTGTGTTGAGACGAGAAGCTAGCCGTCTCGAATTGCCCTACCTAGTTCTTGGTCTTGTCTGGTGCTTTGGTCATTTTTTGCTTATTGAATTTTTTTTTACCAGTATTGATATGTAACAGATTGCCTTGTAAAATCTCTTTAAGACACTGGATGGTTTGCTAGTTCCTTTTTTATATATTTGTTTTAACTTTAAAAGACTAGATGTTGTGCTGTCCTGTTTCGATGAAATGTGTAGAGAAATGTGAACGACTTAAATTTTGTTCTCTCTTCTTTTATCTATGGGATGATATTGAATTAAAGGGTTTTACATAAGGAAAGATGGATGAAAGTATCGGACAGATTCATCTTTTATTAATATGATAATAAACTGATAGATCGGGATGTTAATCTTTGTACCTTTTCTAAAGTTCAGAATCTTTTCTTGCAATGTAATAAATCATACCTTTAACTTTGAAAGAGTACAACCTAGTGGTGCCATGTTCTTTTTCGCCCTAAAGCTTGACTATGAACCGGTAACAGGTGGAATTGTTCTAAGTGGTGGCCTTATTAGCTTCATTTTCTCAAGAAACCCGTCTTCATTGAGCAGTTTGATTTCTGGAGGAGCTTTGCTGGCACTGAGCACCTTAAGTTTGAAAATCTGGAGGCAGGGAAAGTCCAGTTTGCCATTCATTCTAGGACAAGCAGGTAATTGATTTTGTTTCCTGTTTAAGTCAGAGTAGTCTCCCCTCAAATATACTTTAGACATGCGATATTAACATATTTCAATTGCTTGAAACTCGAAAGATATGAATATGACTAATTTCTCAGTTTGAATGTGCTTACCTTCTTTGCAGTATTTACCGCCTCGTTTTTCTGGAATAATATTCAGACATACTCATTGGTATGCACCTCCATCTATAAATACTGACCTGAATCATTAGATATCCATCCCATAATGTAGTGATTATATGATTTTCATGATTGTAGACCAAGAACTTGCTTCCAACTGCCTTGTACGCTGCCCTCAGGTAAATTTCTGATAGTTTTGACTGCCATATCTTCCATTGCTCACAATGCTTCAGATTAATCAAATCCTCCAACACACACTTGTTTTTGGGTTTTTGTTTTCCTCACAGTGCTGCAATGCTCTGCTTCTACTTATATGTGGTAATTTCTGGGGGAAACCCGCCACCGAAAAAATTGAAGCCTTCTCCATCTGCTGCATAATGAATTTTAGTCCTACAAAGTCTGTCTGATTACATTTAGAAAAAATTTACTCTGTGATGTAGCATTTTGAGTTAAGTTAGGAGGGATAAGAGCCTTATTTGCTTTTGTTGGGATTAGTAAAATACGAAATGAAGCTTAGGAGGTGGAAAAAATGTACTTCATCGTCTGTTGTGAGAAGAGGAGTTATGCGTCGAGTCCATGATGATGAAGTAGGCATAGAGTCCATGAAGAGTATGTTACTCAAAAGCAACGGCTGCTTGGTTTTTGCTTTTGAACACAATGGCTTTGAGCTTTGTATTTATGCAATTGGTAGAAATAAATTGTTAGTAGTTGAATGTTTTC TCGATTGACAGTGAAGGCATTCAACATAATTACTTTCAGTTCAACTGATTCGACCTTCTGTAAAACGTGCAGACGATCCAGATTCTTCGAAAAGTATAATTCTCTGAAACCCCGACTTCAAGTTCAATCATCATACATACACAATCGGATCTTAGATCCATCTCGTAGAATTTTCGCAGTGTCCAGTGCTCGATTTTGTTGTTCATTCTTCCAACCCATTTCTTCTTCCTCTAACCTTGCTCCGGTCTAAAATGGCGGCGACGGCGTCTCAGTTTTCGTGCTTATCCGCCTTCAACCGCGGCTTTCGCCTGCAACAGCGCCGTTCATTCTCACTCCCTCGCCCCTCTCTTTCCTTGCCTAAGTTCTCAATTGTTATGAGCCTTGAGGGTTCTGCTTCAAATACTGCTGATTCCCAGACTAAGACAACTTTAAACTACGCTGCTGATGCATCAGAATCTCAAGTTGCCACAAACTCATACCAGGGTGTCGAAAAGTCGTCTGATGTTGGAAATTCGGAGAATGAAAAGCTGCAGGAACCTGCTGATGTTGGCACTGTGCCCATACGAGCAGCAAAAATCCATGATTTCTGTTTTGGCATTCCTTTTGGTGGAATTGTTCTAAGTGGTGGCCTTATTAGCTTCATTTTCTCAAGAAACCCGTCTTCATTGAGCAGTTTGATTTCTGGAGGAGCTTTGCTGGCACTGAGCACCTTAAGTTTGAAAATCTGGAGGCAGGGAAAGTCCAGTTTGCCATTCATTCTAGGACAAGCAGTATTTACCGCCTCGTTTTTCTGGAATAATATTCAGACATACTCATTGACCAAGAACTTGCTTCCAACTGCCTTGTACGCTGCCCTCAGTGCTGCAATGCTCTGCTTCTACTTATATGTGGTAATTTCTGGGGGAAACCCGCCACCGAAAAAATTGAAGCCTTCTCCATCTGCTGCATAATGAATTTTAGTCCTACAAAGTCTGTCTGATTACATTTAGAAAAAATTTACTCTGTGATGTAGCATTTTGAGTTAAGTTAGGAGGGATAAGAGCCTTATTTGCTTTTGTTGGGATTAGTAAAATACGAAATGAAGCTTAGGAGGTGGAAAAAATGTACTTCATCGTCTGTTGTGAGAAGAGGAGTTATGCGTCGAGTCCATGATGATGAAGTAGGCATAGAGTCCATGAAGAGTATGTTACTCAAAAGCAACGGCTGCTTGGTTTTTGCTTTTGAACACAATGGCTTTGAGCTTTGTATTTATGCAATTGGTAGAAATAAATTGTTAGTAGTTGAATGTTTTC ATGGCGGCGACGGCGTCTCAGTTTTCGTGCTTATCCGCCTTCAACCGCGGCTTTCGCCTGCAACAGCGCCGTTCATTCTCACTCCCTCGCCCCTCTCTTTCCTTGCCTAAGTTCTCAATTGTTATGAGCCTTGAGGGTTCTGCTTCAAATACTGCTGATTCCCAGACTAAGACAACTTTAAACTACGCTGCTGATGCATCAGAATCTCAAGTTGCCACAAACTCATACCAGGGTGTCGAAAAGTCGTCTGATGTTGGAAATTCGGAGAATGAAAAGCTGCAGGAACCTGCTGATGTTGGCACTGTGCCCATACGAGCAGCAAAAATCCATGATTTCTGTTTTGGCATTCCTTTTGGTGGAATTGTTCTAAGTGGTGGCCTTATTAGCTTCATTTTCTCAAGAAACCCGTCTTCATTGAGCAGTTTGATTTCTGGAGGAGCTTTGCTGGCACTGAGCACCTTAAGTTTGAAAATCTGGAGGCAGGGAAAGTCCAGTTTGCCATTCATTCTAGGACAAGCAGTATTTACCGCCTCGTTTTTCTGGAATAATATTCAGACATACTCATTGACCAAGAACTTGCTTCCAACTGCCTTGTACGCTGCCCTCAGTGCTGCAATGCTCTGCTTCTACTTATATGTGGTAATTTCTGGGGGAAACCCGCCACCGAAAAAATTGAAGCCTTCTCCATCTGCTGCATAA MAATASQFSCLSAFNRGFRLQQRRSFSLPRPSLSLPKFSIVMSLEGSASNTADSQTKTTLNYAADASESQVATNSYQGVEKSSDVGNSENEKLQEPADVGTVPIRAAKIHDFCFGIPFGGIVLSGGLISFIFSRNPSSLSSLISGGALLALSTLSLKIWRQGKSSLPFILGQAVFTASFFWNNIQTYSLTKNLLPTALYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA Homology
BLAST of Tan0007978 vs. ExPASy Swiss-Prot
Match: Q93V66 (Protein FATTY ACID EXPORT 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FAX1 PE=1 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 7.2e-55 Identity = 124/234 (52.99%), Postives = 163/234 (69.66%), Query Frame = 0
BLAST of Tan0007978 vs. ExPASy Swiss-Prot
Match: Q9C6T7 (Protein FATTY ACID EXPORT 5 OS=Arabidopsis thaliana OX=3702 GN=FAX5 PE=3 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 3.4e-12 Identity = 43/117 (36.75%), Postives = 70/117 (59.83%), Query Frame = 0
BLAST of Tan0007978 vs. ExPASy Swiss-Prot
Match: Q9LJU6 (Protein FATTY ACID EXPORT 6 OS=Arabidopsis thaliana OX=3702 GN=FAX6 PE=3 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 7.6e-12 Identity = 43/117 (36.75%), Postives = 67/117 (57.26%), Query Frame = 0
BLAST of Tan0007978 vs. ExPASy Swiss-Prot
Match: Q9ZVH7 (Protein FATTY ACID EXPORT 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FAX3 PE=2 SV=2) HSP 1 Score: 57.0 bits (136), Expect = 3.3e-07 Identity = 54/182 (29.67%), Postives = 92/182 (50.55%), Query Frame = 0
BLAST of Tan0007978 vs. NCBI nr
Match: XP_038883061.1 (protein FATTY ACID EXPORT 1, chloroplastic [Benincasa hispida]) HSP 1 Score: 389.8 bits (1000), Expect = 1.6e-104 Identity = 205/232 (88.36%), Postives = 213/232 (91.81%), Query Frame = 0
BLAST of Tan0007978 vs. NCBI nr
Match: XP_022153929.1 (protein FATTY ACID EXPORT 1, chloroplastic [Momordica charantia]) HSP 1 Score: 387.5 bits (994), Expect = 8.1e-104 Identity = 205/234 (87.61%), Postives = 217/234 (92.74%), Query Frame = 0
BLAST of Tan0007978 vs. NCBI nr
Match: XP_008464592.1 (PREDICTED: protein FATTY ACID EXPORT 1, chloroplastic [Cucumis melo]) HSP 1 Score: 378.6 bits (971), Expect = 3.8e-101 Identity = 199/232 (85.78%), Postives = 206/232 (88.79%), Query Frame = 0
BLAST of Tan0007978 vs. NCBI nr
Match: XP_011653763.1 (protein FATTY ACID EXPORT 1, chloroplastic [Cucumis sativus]) HSP 1 Score: 373.6 bits (958), Expect = 1.2e-99 Identity = 196/232 (84.48%), Postives = 205/232 (88.36%), Query Frame = 0
BLAST of Tan0007978 vs. NCBI nr
Match: KAG7033497.1 (Protein FATTY ACID EXPORT 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 360.9 bits (925), Expect = 8.1e-96 Identity = 197/234 (84.19%), Postives = 208/234 (88.89%), Query Frame = 0
BLAST of Tan0007978 vs. ExPASy TrEMBL
Match: A0A6J1DKJ1 (protein FATTY ACID EXPORT 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111021328 PE=3 SV=1) HSP 1 Score: 387.5 bits (994), Expect = 3.9e-104 Identity = 205/234 (87.61%), Postives = 217/234 (92.74%), Query Frame = 0
BLAST of Tan0007978 vs. ExPASy TrEMBL
Match: A0A1S3CM01 (protein FATTY ACID EXPORT 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502437 PE=3 SV=1) HSP 1 Score: 378.6 bits (971), Expect = 1.8e-101 Identity = 199/232 (85.78%), Postives = 206/232 (88.79%), Query Frame = 0
BLAST of Tan0007978 vs. ExPASy TrEMBL
Match: A0A6J1EPM7 (protein FATTY ACID EXPORT 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111435489 PE=3 SV=1) HSP 1 Score: 357.5 bits (916), Expect = 4.4e-95 Identity = 195/234 (83.33%), Postives = 208/234 (88.89%), Query Frame = 0
BLAST of Tan0007978 vs. ExPASy TrEMBL
Match: A0A6J1HS27 (protein FATTY ACID EXPORT 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467271 PE=3 SV=1) HSP 1 Score: 356.3 bits (913), Expect = 9.7e-95 Identity = 195/234 (83.33%), Postives = 206/234 (88.03%), Query Frame = 0
BLAST of Tan0007978 vs. ExPASy TrEMBL
Match: A0A5N6RGW4 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_016767 PE=3 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 1.0e-59 Identity = 136/233 (58.37%), Postives = 164/233 (70.39%), Query Frame = 0
BLAST of Tan0007978 vs. TAIR 10
Match: AT3G57280.1 (Transmembrane proteins 14C ) HSP 1 Score: 215.3 bits (547), Expect = 5.1e-56 Identity = 124/234 (52.99%), Postives = 163/234 (69.66%), Query Frame = 0
BLAST of Tan0007978 vs. TAIR 10
Match: AT1G50740.1 (Transmembrane proteins 14C ) HSP 1 Score: 73.6 bits (179), Expect = 2.4e-13 Identity = 43/117 (36.75%), Postives = 70/117 (59.83%), Query Frame = 0
BLAST of Tan0007978 vs. TAIR 10
Match: AT3G20510.1 (Transmembrane proteins 14C ) HSP 1 Score: 72.4 bits (176), Expect = 5.4e-13 Identity = 43/117 (36.75%), Postives = 67/117 (57.26%), Query Frame = 0
BLAST of Tan0007978 vs. TAIR 10
Match: AT2G38550.1 (Transmembrane proteins 14C ) HSP 1 Score: 57.0 bits (136), Expect = 2.3e-08 Identity = 54/182 (29.67%), Postives = 92/182 (50.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|