Tan0007789 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGGTTCCACGCCCCAAAACTCCATCAAAATCCCCTTCACTCCTTACAACGAAACTTCTCTCCTCCATTCTGCAACCATAAACATAACAACCAAAACCCACTCTTAAAATCCCCACTCTCTCTCTCTCTCCAAATCTTCAGATTCTTTCAATCCCAACTGATTTCAATTCCTCTCTCAGCCATGGAAGAATCTTCTCCACTCATCAGCTCCCACTCTCCCACTTTCCTCTCTCCCAATCGCCTCCTCATCAGCTCGCCGGAACTCCAAATCTCCGACATCGAAATGACCCCTCTTCAATCCTACACCAGCCTCAAGGACCTCCTCTCCGACACCTCCTCGCCGCCGCCCTCCGCCGCCTCCCCTCTCCACTGCTCCGCTTGGAACGAACTCCCCATCAAAAACCCACTCGTCAAACACGCCGCCTTGGCCTACCTGCAGCCCATGCTCACCCCGCCCCCCACCGCCGACGCCGGCTTCCTGCGCAAGCTCAAAAAGCACGGCTTCGGATGCATCGACTGGCTCGTCGCCCTCGTCCTTGCCCTCGCCGGAGATCTCTCCGGCCGTGGAGTCCGGCCATGGGACTGATCGGAGATTCGAAATGCCGGCACTGCAGTGCAACTTCCATGAAGCTTCTAGTTGACTGGCGGATAGGAACAGAAAACTTTAACCAATTTTTTTTTTTTCATATAAAAAATATTTGTGTAATTGTCCCTTTATTTTCAGTGGGGTGACGTGTAATTAAAAATGAGATTTGTTCGTAATGTTATATAATGTGATGATTTGTGGATGC GGGTTCCACGCCCCAAAACTCCATCAAAATCCCCTTCACTCCTTACAACGAAACTTCTCTCCTCCATTCTGCAACCATAAACATAACAACCAAAACCCACTCTTAAAATCCCCACTCTCTCTCTCTCTCCAAATCTTCAGATTCTTTCAATCCCAACTGATTTCAATTCCTCTCTCAGCCATGGAAGAATCTTCTCCACTCATCAGCTCCCACTCTCCCACTTTCCTCTCTCCCAATCGCCTCCTCATCAGCTCGCCGGAACTCCAAATCTCCGACATCGAAATGACCCCTCTTCAATCCTACACCAGCCTCAAGGACCTCCTCTCCGACACCTCCTCGCCGCCGCCCTCCGCCGCCTCCCCTCTCCACTGCTCCGCTTGGAACGAACTCCCCATCAAAAACCCACTCGTCAAACACGCCGCCTTGGCCTACCTGCAGCCCATGCTCACCCCGCCCCCCACCGCCGACGCCGGCTTCCTGCGCAAGCTCAAAAAGCACGGCTTCGGATGCATCGACTGGCTCGTCGCCCTCGTCCTTGCCCTCGCCGGAGATCTCTCCGGCCGTGGAGTCCGGCCATGGGACTGATCGGAGATTCGAAATGCCGGCACTGCAGTGCAACTTCCATGAAGCTTCTAGTTGACTGGCGGATAGGAACAGAAAACTTTAACCAATTTTTTTTTTTTCATATAAAAAATATTTGTGTAATTGTCCCTTTATTTTCAGTGGGGTGACGTGTAATTAAAAATGAGATTTGTTCGTAATGTTATATAATGTGATGATTTGTGGATGC ATGGAAGAATCTTCTCCACTCATCAGCTCCCACTCTCCCACTTTCCTCTCTCCCAATCGCCTCCTCATCAGCTCGCCGGAACTCCAAATCTCCGACATCGAAATGACCCCTCTTCAATCCTACACCAGCCTCAAGGACCTCCTCTCCGACACCTCCTCGCCGCCGCCCTCCGCCGCCTCCCCTCTCCACTGCTCCGCTTGGAACGAACTCCCCATCAAAAACCCACTCGTCAAACACGCCGCCTTGGCCTACCTGCAGCCCATGCTCACCCCGCCCCCCACCGCCGACGCCGGCTTCCTGCGCAAGCTCAAAAAGCACGGCTTCGGATGCATCGACTGGCTCGTCGCCCTCGTCCTTGCCCTCGCCGGAGATCTCTCCGGCCGTGGAGTCCGGCCATGGGACTGA MEESSPLISSHSPTFLSPNRLLISSPELQISDIEMTPLQSYTSLKDLLSDTSSPPPSAASPLHCSAWNELPIKNPLVKHAALAYLQPMLTPPPTADAGFLRKLKKHGFGCIDWLVALVLALAGDLSGRGVRPWD Homology
BLAST of Tan0007789 vs. NCBI nr
Match: KAG6571006.1 (hypothetical protein SDJN03_29921, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010836.1 hypothetical protein SDJN02_27632, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 180.6 bits (457), Expect = 8.7e-42 Identity = 97/133 (72.93%), Postives = 106/133 (79.70%), Query Frame = 0
BLAST of Tan0007789 vs. NCBI nr
Match: PQQ14465.1 (uncharacterized protein Pyn_20094 [Prunus yedoensis var. nudiflora]) HSP 1 Score: 115.9 bits (289), Expect = 2.6e-22 Identity = 67/127 (52.76%), Postives = 83/127 (65.35%), Query Frame = 0
BLAST of Tan0007789 vs. NCBI nr
Match: XP_021810412.1 (uncharacterized protein LOC110753763 [Prunus avium]) HSP 1 Score: 115.5 bits (288), Expect = 3.4e-22 Identity = 67/127 (52.76%), Postives = 83/127 (65.35%), Query Frame = 0
BLAST of Tan0007789 vs. NCBI nr
Match: PQQ02572.1 (uncharacterized protein Pyn_10650 [Prunus yedoensis var. nudiflora]) HSP 1 Score: 115.2 bits (287), Expect = 4.5e-22 Identity = 67/127 (52.76%), Postives = 83/127 (65.35%), Query Frame = 0
BLAST of Tan0007789 vs. NCBI nr
Match: KAB2636267.1 (hypothetical protein D8674_026801 [Pyrus ussuriensis x Pyrus communis]) HSP 1 Score: 115.2 bits (287), Expect = 4.5e-22 Identity = 71/128 (55.47%), Postives = 85/128 (66.41%), Query Frame = 0
BLAST of Tan0007789 vs. ExPASy TrEMBL
Match: A0A0A0LPR9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G271440 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 8.0e-33 Identity = 86/120 (71.67%), Postives = 95/120 (79.17%), Query Frame = 0
BLAST of Tan0007789 vs. ExPASy TrEMBL
Match: A0A314Z2H1 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_20094 PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 1.3e-22 Identity = 67/127 (52.76%), Postives = 83/127 (65.35%), Query Frame = 0
BLAST of Tan0007789 vs. ExPASy TrEMBL
Match: A0A6P5S7A4 (uncharacterized protein LOC110753763 OS=Prunus avium OX=42229 GN=LOC110753763 PE=4 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 1.7e-22 Identity = 67/127 (52.76%), Postives = 83/127 (65.35%), Query Frame = 0
BLAST of Tan0007789 vs. ExPASy TrEMBL
Match: A0A314Y647 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_10650 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 2.2e-22 Identity = 67/127 (52.76%), Postives = 83/127 (65.35%), Query Frame = 0
BLAST of Tan0007789 vs. ExPASy TrEMBL
Match: A0A5N5IAH8 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_026801 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 2.2e-22 Identity = 71/128 (55.47%), Postives = 85/128 (66.41%), Query Frame = 0
BLAST of Tan0007789 vs. TAIR 10
Match: AT3G52520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06280.3); Has 24 Blast hits to 24 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 45.4 bits (106), Expect = 4.1e-05 Identity = 30/70 (42.86%), Postives = 42/70 (60.00%), Query Frame = 0
BLAST of Tan0007789 vs. TAIR 10
Match: AT5G06280.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 42.7 bits (99), Expect = 2.6e-04 Identity = 31/91 (34.07%), Postives = 53/91 (58.24%), Query Frame = 0
BLAST of Tan0007789 vs. TAIR 10
Match: AT5G06280.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 42.7 bits (99), Expect = 2.6e-04 Identity = 31/91 (34.07%), Postives = 53/91 (58.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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