Tan0007789 (gene) Snake gourd v1

Overview
NameTan0007789
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionzinc-regulated protein 8-like
LocationLG05: 9769638 .. 9770427 (-)
RNA-Seq ExpressionTan0007789
SyntenyTan0007789
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGTTCCACGCCCCAAAACTCCATCAAAATCCCCTTCACTCCTTACAACGAAACTTCTCTCCTCCATTCTGCAACCATAAACATAACAACCAAAACCCACTCTTAAAATCCCCACTCTCTCTCTCTCTCCAAATCTTCAGATTCTTTCAATCCCAACTGATTTCAATTCCTCTCTCAGCCATGGAAGAATCTTCTCCACTCATCAGCTCCCACTCTCCCACTTTCCTCTCTCCCAATCGCCTCCTCATCAGCTCGCCGGAACTCCAAATCTCCGACATCGAAATGACCCCTCTTCAATCCTACACCAGCCTCAAGGACCTCCTCTCCGACACCTCCTCGCCGCCGCCCTCCGCCGCCTCCCCTCTCCACTGCTCCGCTTGGAACGAACTCCCCATCAAAAACCCACTCGTCAAACACGCCGCCTTGGCCTACCTGCAGCCCATGCTCACCCCGCCCCCCACCGCCGACGCCGGCTTCCTGCGCAAGCTCAAAAAGCACGGCTTCGGATGCATCGACTGGCTCGTCGCCCTCGTCCTTGCCCTCGCCGGAGATCTCTCCGGCCGTGGAGTCCGGCCATGGGACTGATCGGAGATTCGAAATGCCGGCACTGCAGTGCAACTTCCATGAAGCTTCTAGTTGACTGGCGGATAGGAACAGAAAACTTTAACCAATTTTTTTTTTTTCATATAAAAAATATTTGTGTAATTGTCCCTTTATTTTCAGTGGGGTGACGTGTAATTAAAAATGAGATTTGTTCGTAATGTTATATAATGTGATGATTTGTGGATGC

mRNA sequence

GGGTTCCACGCCCCAAAACTCCATCAAAATCCCCTTCACTCCTTACAACGAAACTTCTCTCCTCCATTCTGCAACCATAAACATAACAACCAAAACCCACTCTTAAAATCCCCACTCTCTCTCTCTCTCCAAATCTTCAGATTCTTTCAATCCCAACTGATTTCAATTCCTCTCTCAGCCATGGAAGAATCTTCTCCACTCATCAGCTCCCACTCTCCCACTTTCCTCTCTCCCAATCGCCTCCTCATCAGCTCGCCGGAACTCCAAATCTCCGACATCGAAATGACCCCTCTTCAATCCTACACCAGCCTCAAGGACCTCCTCTCCGACACCTCCTCGCCGCCGCCCTCCGCCGCCTCCCCTCTCCACTGCTCCGCTTGGAACGAACTCCCCATCAAAAACCCACTCGTCAAACACGCCGCCTTGGCCTACCTGCAGCCCATGCTCACCCCGCCCCCCACCGCCGACGCCGGCTTCCTGCGCAAGCTCAAAAAGCACGGCTTCGGATGCATCGACTGGCTCGTCGCCCTCGTCCTTGCCCTCGCCGGAGATCTCTCCGGCCGTGGAGTCCGGCCATGGGACTGATCGGAGATTCGAAATGCCGGCACTGCAGTGCAACTTCCATGAAGCTTCTAGTTGACTGGCGGATAGGAACAGAAAACTTTAACCAATTTTTTTTTTTTCATATAAAAAATATTTGTGTAATTGTCCCTTTATTTTCAGTGGGGTGACGTGTAATTAAAAATGAGATTTGTTCGTAATGTTATATAATGTGATGATTTGTGGATGC

Coding sequence (CDS)

ATGGAAGAATCTTCTCCACTCATCAGCTCCCACTCTCCCACTTTCCTCTCTCCCAATCGCCTCCTCATCAGCTCGCCGGAACTCCAAATCTCCGACATCGAAATGACCCCTCTTCAATCCTACACCAGCCTCAAGGACCTCCTCTCCGACACCTCCTCGCCGCCGCCCTCCGCCGCCTCCCCTCTCCACTGCTCCGCTTGGAACGAACTCCCCATCAAAAACCCACTCGTCAAACACGCCGCCTTGGCCTACCTGCAGCCCATGCTCACCCCGCCCCCCACCGCCGACGCCGGCTTCCTGCGCAAGCTCAAAAAGCACGGCTTCGGATGCATCGACTGGCTCGTCGCCCTCGTCCTTGCCCTCGCCGGAGATCTCTCCGGCCGTGGAGTCCGGCCATGGGACTGA

Protein sequence

MEESSPLISSHSPTFLSPNRLLISSPELQISDIEMTPLQSYTSLKDLLSDTSSPPPSAASPLHCSAWNELPIKNPLVKHAALAYLQPMLTPPPTADAGFLRKLKKHGFGCIDWLVALVLALAGDLSGRGVRPWD
Homology
BLAST of Tan0007789 vs. NCBI nr
Match: KAG6571006.1 (hypothetical protein SDJN03_29921, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010836.1 hypothetical protein SDJN02_27632, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 180.6 bits (457), Expect = 8.7e-42
Identity = 97/133 (72.93%), Postives = 106/133 (79.70%), Query Frame = 0

Query: 1   MEESSPLISSHSPTFLSPNRLLISSPELQISDIEMTPLQSYTSLKDLLSDTSSPPPSAAS 60
           MEES       SPTFLS +RLL SS EL+ SDIEMTPLQSYTSLKDLL DT SPPPSAA 
Sbjct: 1   MEES-------SPTFLSSDRLL-SSSELEFSDIEMTPLQSYTSLKDLLPDTPSPPPSAAY 60

Query: 61  PLHCSAWNELPIKNPLVKHAALAYLQPMLTPPPTADAGFLRKLKKHGFGCIDWLVALVLA 120
           PL C AW+ELPIKNPLVKHAALAYLQPMLTPP   D  F+R+LKKHGFGCI+WLVA++  
Sbjct: 61  PLQCPAWDELPIKNPLVKHAALAYLQPMLTPPAAGDRSFMRRLKKHGFGCIEWLVAVI-- 120

Query: 121 LAGDLSGRGVRPW 134
             G+LSG GVR W
Sbjct: 121 --GELSG-GVRRW 120

BLAST of Tan0007789 vs. NCBI nr
Match: PQQ14465.1 (uncharacterized protein Pyn_20094 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 115.9 bits (289), Expect = 2.6e-22
Identity = 67/127 (52.76%), Postives = 83/127 (65.35%), Query Frame = 0

Query: 10  SHSPTFLSPNRLLISSPELQISDIEMTPLQ--SYTSLKDLLSDTSSPPPSAASPLHCSAW 69
           SHSP+FL PN       E++ISDIEM  +Q  +YTSLKDLL    + PP+  SP H S+W
Sbjct: 19  SHSPSFLLPN----GFGEIEISDIEMITIQTVTYTSLKDLL---PASPPTIMSPTHNSSW 78

Query: 70  NELPIKNPLVKHAALAYLQPMLTPPPTADAGFLRKLKK-------HGFGCIDWLVALVLA 128
           +E+PIKNPLVKHAALAYLQPM TPP   D G LR L++       +G GC  WL  +VL+
Sbjct: 79  HEIPIKNPLVKHAALAYLQPMSTPPEVGDKGLLRMLREKCVCGGANGLGCFAWLGDVVLS 138

BLAST of Tan0007789 vs. NCBI nr
Match: XP_021810412.1 (uncharacterized protein LOC110753763 [Prunus avium])

HSP 1 Score: 115.5 bits (288), Expect = 3.4e-22
Identity = 67/127 (52.76%), Postives = 83/127 (65.35%), Query Frame = 0

Query: 10  SHSPTFLSPNRLLISSPELQISDIEMTPLQ--SYTSLKDLLSDTSSPPPSAASPLHCSAW 69
           SHSP+FL PN       E++ISDIEM  +Q  +YTSLKDLL    + PP+  SP H S+W
Sbjct: 19  SHSPSFLLPN----GFGEIEISDIEMITIQTVTYTSLKDLL---PASPPTIMSPTHNSSW 78

Query: 70  NELPIKNPLVKHAALAYLQPMLTPPPTADAGFLRKLKK-------HGFGCIDWLVALVLA 128
           +E+PIKNPLVKHAALAYLQPM TPP   D G LR L++       +G GC  WL  +VL+
Sbjct: 79  HEIPIKNPLVKHAALAYLQPMSTPPEVGDKGLLRMLREKCVCGGANGLGCFAWLGDVVLS 138

BLAST of Tan0007789 vs. NCBI nr
Match: PQQ02572.1 (uncharacterized protein Pyn_10650 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 115.2 bits (287), Expect = 4.5e-22
Identity = 67/127 (52.76%), Postives = 83/127 (65.35%), Query Frame = 0

Query: 10  SHSPTFLSPNRLLISSPELQISDIEMTPLQ--SYTSLKDLLSDTSSPPPSAASPLHCSAW 69
           SHSP+FL PN       E++ISDIEM  +Q  +YTSLKDLL  +   PP+  SP H S+W
Sbjct: 17  SHSPSFLLPN----GFGEIEISDIEMITIQTVTYTSLKDLLPVS---PPTIMSPTHNSSW 76

Query: 70  NELPIKNPLVKHAALAYLQPMLTPPPTADAGFLRKLKK-------HGFGCIDWLVALVLA 128
           +E+PIKNPLVKHAALAYLQPM TPP   D G LR L++       +G GC  WL  +VL+
Sbjct: 77  HEIPIKNPLVKHAALAYLQPMSTPPEVGDKGLLRMLREKCVCGGANGLGCFAWLGDVVLS 136

BLAST of Tan0007789 vs. NCBI nr
Match: KAB2636267.1 (hypothetical protein D8674_026801 [Pyrus ussuriensis x Pyrus communis])

HSP 1 Score: 115.2 bits (287), Expect = 4.5e-22
Identity = 71/128 (55.47%), Postives = 85/128 (66.41%), Query Frame = 0

Query: 6   PLISSHSPTFLSPNRLLISSPELQISDIEMTPLQ--SYTSLKDLLSDTSSPPPSAASPLH 65
           P ++SHSPTFL  N       E++ISDIEM  +Q  SYTSLKDLL   +SPP S  SP+H
Sbjct: 57  PTLNSHSPTFLLHNGF---GDEIEISDIEMVTIQTVSYTSLKDLL--PASPPLSVMSPIH 116

Query: 66  CSAW-NELPIKNPLVKHAALAYLQPMLTPPPTADAGFLRKL--KKH-GFGCIDWLVALVL 125
            S+W +E+PIKNPLVKHAALAYLQPM TPP   D G LR L  K H   GC+ W+  +VL
Sbjct: 117 NSSWHDEIPIKNPLVKHAALAYLQPMSTPPEVGDKGLLRMLGEKCHCELGCLAWVGDVVL 176

Query: 126 ALAGDLSG 128
               D+ G
Sbjct: 177 KTVRDVFG 179

BLAST of Tan0007789 vs. ExPASy TrEMBL
Match: A0A0A0LPR9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G271440 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 8.0e-33
Identity = 86/120 (71.67%), Postives = 95/120 (79.17%), Query Frame = 0

Query: 1   MEESSPLISSHSPT-FLSPNRLLISSPELQIS-DIEMTPLQSYTSLKDLLSDTSSPPPSA 60
           ME+S     S SPT FLSPN  L SSPEL+ S DIEMTPLQSYTSLKDLL D+ SPPPSA
Sbjct: 1   MEDSPSPSPSPSPTSFLSPNHPL-SSPELEFSDDIEMTPLQSYTSLKDLLPDSPSPPPSA 60

Query: 61  ASPLHCSAWNELPIKNPLVKHAALAYLQPMLTPPPTADAGFLRKLKKHGFGCIDWLVALV 119
            SP    A+++LPIKNPLVKHAALAYLQPMLTPP T+   FLR LKKHGFGCI+WL A+V
Sbjct: 61  TSP----AFDQLPIKNPLVKHAALAYLQPMLTPPTTSHPTFLRILKKHGFGCIEWLAAVV 115

BLAST of Tan0007789 vs. ExPASy TrEMBL
Match: A0A314Z2H1 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_20094 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.3e-22
Identity = 67/127 (52.76%), Postives = 83/127 (65.35%), Query Frame = 0

Query: 10  SHSPTFLSPNRLLISSPELQISDIEMTPLQ--SYTSLKDLLSDTSSPPPSAASPLHCSAW 69
           SHSP+FL PN       E++ISDIEM  +Q  +YTSLKDLL    + PP+  SP H S+W
Sbjct: 19  SHSPSFLLPN----GFGEIEISDIEMITIQTVTYTSLKDLL---PASPPTIMSPTHNSSW 78

Query: 70  NELPIKNPLVKHAALAYLQPMLTPPPTADAGFLRKLKK-------HGFGCIDWLVALVLA 128
           +E+PIKNPLVKHAALAYLQPM TPP   D G LR L++       +G GC  WL  +VL+
Sbjct: 79  HEIPIKNPLVKHAALAYLQPMSTPPEVGDKGLLRMLREKCVCGGANGLGCFAWLGDVVLS 138

BLAST of Tan0007789 vs. ExPASy TrEMBL
Match: A0A6P5S7A4 (uncharacterized protein LOC110753763 OS=Prunus avium OX=42229 GN=LOC110753763 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.7e-22
Identity = 67/127 (52.76%), Postives = 83/127 (65.35%), Query Frame = 0

Query: 10  SHSPTFLSPNRLLISSPELQISDIEMTPLQ--SYTSLKDLLSDTSSPPPSAASPLHCSAW 69
           SHSP+FL PN       E++ISDIEM  +Q  +YTSLKDLL    + PP+  SP H S+W
Sbjct: 19  SHSPSFLLPN----GFGEIEISDIEMITIQTVTYTSLKDLL---PASPPTIMSPTHNSSW 78

Query: 70  NELPIKNPLVKHAALAYLQPMLTPPPTADAGFLRKLKK-------HGFGCIDWLVALVLA 128
           +E+PIKNPLVKHAALAYLQPM TPP   D G LR L++       +G GC  WL  +VL+
Sbjct: 79  HEIPIKNPLVKHAALAYLQPMSTPPEVGDKGLLRMLREKCVCGGANGLGCFAWLGDVVLS 138

BLAST of Tan0007789 vs. ExPASy TrEMBL
Match: A0A314Y647 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_10650 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 2.2e-22
Identity = 67/127 (52.76%), Postives = 83/127 (65.35%), Query Frame = 0

Query: 10  SHSPTFLSPNRLLISSPELQISDIEMTPLQ--SYTSLKDLLSDTSSPPPSAASPLHCSAW 69
           SHSP+FL PN       E++ISDIEM  +Q  +YTSLKDLL  +   PP+  SP H S+W
Sbjct: 17  SHSPSFLLPN----GFGEIEISDIEMITIQTVTYTSLKDLLPVS---PPTIMSPTHNSSW 76

Query: 70  NELPIKNPLVKHAALAYLQPMLTPPPTADAGFLRKLKK-------HGFGCIDWLVALVLA 128
           +E+PIKNPLVKHAALAYLQPM TPP   D G LR L++       +G GC  WL  +VL+
Sbjct: 77  HEIPIKNPLVKHAALAYLQPMSTPPEVGDKGLLRMLREKCVCGGANGLGCFAWLGDVVLS 136

BLAST of Tan0007789 vs. ExPASy TrEMBL
Match: A0A5N5IAH8 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_026801 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 2.2e-22
Identity = 71/128 (55.47%), Postives = 85/128 (66.41%), Query Frame = 0

Query: 6   PLISSHSPTFLSPNRLLISSPELQISDIEMTPLQ--SYTSLKDLLSDTSSPPPSAASPLH 65
           P ++SHSPTFL  N       E++ISDIEM  +Q  SYTSLKDLL   +SPP S  SP+H
Sbjct: 57  PTLNSHSPTFLLHNGF---GDEIEISDIEMVTIQTVSYTSLKDLL--PASPPLSVMSPIH 116

Query: 66  CSAW-NELPIKNPLVKHAALAYLQPMLTPPPTADAGFLRKL--KKH-GFGCIDWLVALVL 125
            S+W +E+PIKNPLVKHAALAYLQPM TPP   D G LR L  K H   GC+ W+  +VL
Sbjct: 117 NSSWHDEIPIKNPLVKHAALAYLQPMSTPPEVGDKGLLRMLGEKCHCELGCLAWVGDVVL 176

Query: 126 ALAGDLSG 128
               D+ G
Sbjct: 177 KTVRDVFG 179

BLAST of Tan0007789 vs. TAIR 10
Match: AT3G52520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06280.3); Has 24 Blast hits to 24 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 4.1e-05
Identity = 30/70 (42.86%), Postives = 42/70 (60.00%), Query Frame = 0

Query: 37  PLQSYTSLKDLLSDTSSPPPSAASPLHCSAWNELP---IKNPLVKHAALAYLQPMLTPPP 96
           PL  YTSLKD+L  +S+   S A     ++    P   I+N LVK AA +YLQP  TP P
Sbjct: 37  PLPCYTSLKDILPSSSTTVDSPAISFAVASAVSGPTITIRNRLVKQAACSYLQPS-TPTP 96

Query: 97  TADAGFLRKL 104
           +++  FLR++
Sbjct: 97  SSNPSFLRRV 105

BLAST of Tan0007789 vs. TAIR 10
Match: AT5G06280.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 42.7 bits (99), Expect = 2.6e-04
Identity = 31/91 (34.07%), Postives = 53/91 (58.24%), Query Frame = 0

Query: 24  SSPELQISDIEMTPLQSYTSLKDLLS---DTSSPPPS---AASPLHCSAWNELPIKNPLV 83
           SS + ++  ++ +   +YTSL+D++S   ++S   PS   + SP+  +A  ++ I+N LV
Sbjct: 40  SSFDYELISVKPSSFVAYTSLRDIISSPINSSLNLPSINGSCSPVISTAAGDISIRNRLV 99

Query: 84  KHAALAYLQPMLTPPPTADAG--FLRKLKKH 107
           K AAL+YLQP +       AG  F R++  H
Sbjct: 100 KQAALSYLQPTVLTSSDDSAGSQFFRRVWLH 130

BLAST of Tan0007789 vs. TAIR 10
Match: AT5G06280.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 42.7 bits (99), Expect = 2.6e-04
Identity = 31/91 (34.07%), Postives = 53/91 (58.24%), Query Frame = 0

Query: 24  SSPELQISDIEMTPLQSYTSLKDLLS---DTSSPPPS---AASPLHCSAWNELPIKNPLV 83
           SS + ++  ++ +   +YTSL+D++S   ++S   PS   + SP+  +A  ++ I+N LV
Sbjct: 40  SSFDYELISVKPSSFVAYTSLRDIISSPINSSLNLPSINGSCSPVISTAAGDISIRNRLV 99

Query: 84  KHAALAYLQPMLTPPPTADAG--FLRKLKKH 107
           K AAL+YLQP +       AG  F R++  H
Sbjct: 100 KQAALSYLQPTVLTSSDDSAGSQFFRRVWLH 130

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6571006.18.7e-4272.93hypothetical protein SDJN03_29921, partial [Cucurbita argyrosperma subsp. sorori... [more]
PQQ14465.12.6e-2252.76uncharacterized protein Pyn_20094 [Prunus yedoensis var. nudiflora][more]
XP_021810412.13.4e-2252.76uncharacterized protein LOC110753763 [Prunus avium][more]
PQQ02572.14.5e-2252.76uncharacterized protein Pyn_10650 [Prunus yedoensis var. nudiflora][more]
KAB2636267.14.5e-2255.47hypothetical protein D8674_026801 [Pyrus ussuriensis x Pyrus communis][more]
Match NameE-valueIdentityDescription
A0A0A0LPR98.0e-3371.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G271440 PE=4 SV=1[more]
A0A314Z2H11.3e-2252.76Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_200... [more]
A0A6P5S7A41.7e-2252.76uncharacterized protein LOC110753763 OS=Prunus avium OX=42229 GN=LOC110753763 PE... [more]
A0A314Y6472.2e-2252.76Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_106... [more]
A0A5N5IAH82.2e-2255.47Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D867... [more]
Match NameE-valueIdentityDescription
AT3G52520.14.1e-0542.86unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G06280.12.6e-0434.07unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G06280.32.6e-0434.07unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34569:SF12SUBFAMILY NOT NAMEDcoord: 27..120
NoneNo IPR availablePANTHERPTHR34569EXPRESSED PROTEINcoord: 27..120

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0007789.1Tan0007789.1mRNA