Tan0007787 (gene) Snake gourd v1

Overview


Name	Tan0007787
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	MADS-box transcription factor 6-like
Location	LG05: 81763610 .. 81767201 (+)
RNA-Seq Expression	Tan0007787
Synteny	Tan0007787

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAACCTTAATTCTCCCTTGCATGAACCTCTCACACTTTTTCTATTTTATTCACAACATTCGTTTTTTTTTTTCTTTTGTATCGCCGATTGGAAAAAAAATGGGAAGAGGCAAAGTTGAGCTGAAGAGAATCGAAAATTCGACAAGTCGGCAAGTGACCTTCTCGAAACGTCGGAATGGGCTTTTGAAGAAAGCTTATGAGCTCTCTGTTCTTTGTGATGCCGAAGTTGCCCTCCTCATTTTTTCCCCTTCCGGCAAAGCCTACCAATTCTCTAGCCATGAGTTCGTACTTCTTTTTACTCTCTTTTTTTCATCTTAGATTTAGTCAATTATATGATTTTTTTTTTTGAATTTTAAAATATTTTCTCTAACTTTGGCTTTGATTTCTATCATTATCGGAAGACAATATGTAAAATGTTAGAAGGTAAAATTTGTGTATGCATCTAGAAGAATTTCTAGCTTCCTCCCTTATTTTTTAGAATTGAAAGACTATATATGAAGGTTGGAATCTCTGAAAAATTTTCTGGCTTTGTCCTTGTTTACGAGTTTGGTAATAGCATTTAATTTCAGATTAAGTATATAAAAAATAGGAGGAAAAATCCAGTAATGACGTGTTTTTTTTTTGAAATATGTATGTAAGATTTGTTAATATTTTGATTTTTGTGTGTTTGTTTAATTGGGCGCAGCATGGATGGAACCCTAGCCAGGTACAGGAATGACATGGGGCTACCACAATCGAACCATCCACATTCACGAGCTCTGGTATTTAATTACTTAATTAATTCTATTTATGAATTGGATTCTCTCTCTGTTTTTATTTGAGACACTCAGAATTTCCTCAGTAAGAGTTAATTTAACGAGAGATTGTAGATTGGCGTGATGAACAATGTTGAGGAGAGACTCTGGATTCTGAACCTAAAAAAAAAAAATTATATTGTAGATTCTTGAGGACTTTTATGGAATTGTTTATTAATTTATGGGTTGTAGTTTTGGAAGAGTGAGATGGAGGACATGAAAAGATCAATAAACAGCTTGGAGGCAAGATTAAGGTACATGTGATTTATGATTATTTAAGTCTCCTCTATTAGATCACTTAATTTTTTAAAAATTATTTTTCGTGTTTGAAATTTAACTAAGAATTTAAATATTTCTTAAAATTCATAATGAAAAAATAAATATAATTTTTTTAAAAAAATAAAATAATTATCAAAGGGGCATTAAGGTAAAAGTTTAAAAAAATATATGCATTACGAAAATATGTATGGACTCTCTATACAGGCACTTTGCTGGAGAGGATCTAGGACCGTTGAGCGTGAAGGAGTTAAAACAGTTAGAAAGACAACTGAGTGTGGGAATTGAACGTGTCCGCTCTAAAAAGGTAAATTCTCCTTTCTAATTTTGAGGAAAAAAATGTCAAATTATAAGGGTTTTTTTTTTCTTGCGTTCATAAATTATAAGTATCTAAGTAATAAATTTCATTACTAAAAAACTAATAAATTTTTAAGTATCTCAGTAATGTTTAATAAATCTTTAATCTTGTATCTTTTTAGTACATCAACAATTAGGGGTGGGAGATTCGAACCCACGACGTATTAGTCATGAGTCATACTTCATGCAAGTTAAGTTATACTCTTGTTGGCTTTTAATCTTGTATCTAATATGTCCAAGAACAACTAATTTCATTTTCATGTCTAATATTCTTAATTTATGAGACATTTTTATAAAAGTTTATGGACTTATCCAAAAAAAAATTGAAATTTCACAATTTTATTAGACATTTTTTAAAATTTAAGAACTTATTATATATAACGCATAAAGATTAGTTTGATAACAATTGATGTAATCTTTTTTTTTTTCTGTTAAAAAACTGTTTAAATTATATGTGATTTCTGGGTTTTTTTTTCCTTCAAGTTTAACAATGTCATCATATAAATTTGAACATCTGAACAAATATGTACAACTCGGTGGATTCTAGTATTTCATATTATTATTCCCTTCAAATTCTATGTAGAACATGCTTATTCAAAGTGGAATATAGTATTTGGTCTAAAATTCAATGAATTGCATTATTCAGAGATCTTTAAATATATATATATATATATATAGACAACTATATATATATATATATATATATATATATATATATATATATATATATTGTAATGTACATGCTCAAGCTGTTTTTAAAAATCCTAGTTAAATTTGAAAACTCATCAAGAATTTCAAATTTTTGGTTTCTAACTTCTTGTATATATGTATTTTTCTTTATAACAACAATGAAAATTTGAATGAAAATTAGTGTTGCTAATTATGTCCTGAGCTGTTTGCATTTATTGGAAACCGATATTTACTTTTTAGAAACCAAAAACATCGAAAATGCTTTTAAAACCATGCTTAAAAAGATTAGGGTTCGCGCAATATTTAGCTTTTGGTGGGTCAGTTGCTTTGCTCATCACCCTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATATGATCGACAGAGACGCATCATTTCAGAGCACATAAACCTGTTGAAAAGGAAGGTAACATCGTCAATTCTTAAATACACAATTTCGTATATCCATTACAGTTTCAAACAACAATAAACGAAACACATATTTAAAATTATTAAATGTTGGGTTGTCGTTTTAATTTAAATTTATGGCAGCACAAGGGTCTGCAAGAGGAACACAGCCGTCTGCAAAAAAGAGTAAGAAATTTAATTTCTAAATTGCACTTTAAAAATTCATTTACTGAAATTTTTTTTTTTAAATGTGTCTGTTCTTATTAATTTCAGTTGAATCAGCTTAAGGATGTGGCTGTGACAACTTCAAGAACTTCAGATGCTAATGGCACCTCTGCACTGGAAATGTACGTATTTAATCTTTTTAAATTCTCAATTTTACCTGTTAGAAAATTTTAATTAGGTATTTTCATTAAAAATCTTGTTGATATAAAATTAATTATCTTAGATATAATACTTTGAAAGAATAATTTTTTTACATCGGCGTGTTAGGATTTCATGAGTCTAAATATGTTAATAAGTTAATAATTTAATGATACATTAACCTTTAGTTAGCAAATATTTTATGAAATGAGACTTAATTGAAGATTTTTAAAAATTGGGGACCAAATTGATAACGGACTAAAACATTAGATTGTGTGGTATATTTAATCTATAAATATAAATATAACTGCTTATTTTTTTAGAATGTTTATTAACAAAGCTAGAATTCAATTCAAATGCAAATTTTATGTAGGAATTTACATGCAGGGCTTTTCAGGTGGATGGGGTACTAATTTGAGCAATATGGACAAATTAACCCGTCAACTTTTGGAGTTGAACATGATCGTCAAGCTTTGTTTTTTAAAAAACTTGTGTAATTTTATTTTGATTTTCTGTGATCTCCAACTATTTGACAGCATAAAGGAAAGAAATTCCGTTTACCCGCACAAGAAAAAATCTTTAATTACTTTTGTGGGAATACCATTATGATTAAATTATAAATTTAGTCCCTATGGGTTAAAGAAACTTAAAATTTTAGATTTTATGATTTTTTAAATGTTAAAATTAGTCTTTATGATCCAATAAAA

mRNA sequence

GTAACCTTAATTCTCCCTTGCATGAACCTCTCACACTTTTTCTATTTTATTCACAACATTCGTTTTTTTTTTTCTTTTGTATCGCCGATTGGAAAAAAAATGGGAAGAGGCAAAGTTGAGCTGAAGAGAATCGAAAATTCGACAAGTCGGCAAGTGACCTTCTCGAAACGTCGGAATGGGCTTTTGAAGAAAGCTTATGAGCTCTCTGTTCTTTGTGATGCCGAAGTTGCCCTCCTCATTTTTTCCCCTTCCGGCAAAGCCTACCAATTCTCTAGCCATGACATGGATGGAACCCTAGCCAGGTACAGGAATGACATGGGGCTACCACAATCGAACCATCCACATTCACGAGCTCTGTTTTGGAAGAGTGAGATGGAGGACATGAAAAGATCAATAAACAGCTTGGAGGCAAGATTAAGGCACTTTGCTGGAGAGGATCTAGGACCGTTGAGCGTGAAGGAGTTAAAACAGTTAGAAAGACAACTGAGTGTGGGAATTGAACGTGTCCGCTCTAAAAAGAGACGCATCATTTCAGAGCACATAAACCTGTTGAAAAGGAAGCACAAGGGTCTGCAAGAGGAACACAGCCGTCTGCAAAAAAGATTGAATCAGCTTAAGGATGTGGCTGTGACAACTTCAAGAACTTCAGATGCTAATGGCACCTCTGCACTGGAAATGGCTTTTCAGGTGGATGGGGTACTAATTTGAGCAATATGGACAAATTAACCCGTCAACTTTTGGAGTTGAACATGATCGTCAAGCTTTGTTTTTTAAAAAACTTGTGTAATTTTATTTTGATTTTCTGTGATCTCCAACTATTTGACAGCATAAAGGAAAGAAATTCCGTTTACCCGCACAAGAAAAAATCTTTAATTACTTTTGTGGGAATACCATTATGATTAAATTATAAATTTAGTCCCTATGGGTTAAAGAAACTTAAAATTTTAGATTTTATGATTTTTTAAATGTTAAAATTAGTCTTTATGATCCAATAAAA

Coding sequence (CDS)

ATGAACCTCTCACACTTTTTCTATTTTATTCACAACATTCGTTTTTTTTTTTCTTTTGTATCGCCGATTGGAAAAAAAATGGGAAGAGGCAAAGTTGAGCTGAAGAGAATCGAAAATTCGACAAGTCGGCAAGTGACCTTCTCGAAACGTCGGAATGGGCTTTTGAAGAAAGCTTATGAGCTCTCTGTTCTTTGTGATGCCGAAGTTGCCCTCCTCATTTTTTCCCCTTCCGGCAAAGCCTACCAATTCTCTAGCCATGACATGGATGGAACCCTAGCCAGGTACAGGAATGACATGGGGCTACCACAATCGAACCATCCACATTCACGAGCTCTGTTTTGGAAGAGTGAGATGGAGGACATGAAAAGATCAATAAACAGCTTGGAGGCAAGATTAAGGCACTTTGCTGGAGAGGATCTAGGACCGTTGAGCGTGAAGGAGTTAAAACAGTTAGAAAGACAACTGAGTGTGGGAATTGAACGTGTCCGCTCTAAAAAGAGACGCATCATTTCAGAGCACATAAACCTGTTGAAAAGGAAGCACAAGGGTCTGCAAGAGGAACACAGCCGTCTGCAAAAAAGATTGAATCAGCTTAAGGATGTGGCTGTGACAACTTCAAGAACTTCAGATGCTAATGGCACCTCTGCACTGGAAATGGCTTTTCAGGTGGATGGGGTACTAATTTGA

Protein sequence

MNLSHFFYFIHNIRFFFSFVSPIGKKMGRGKVELKRIENSTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIFSPSGKAYQFSSHDMDGTLARYRNDMGLPQSNHPHSRALFWKSEMEDMKRSINSLEARLRHFAGEDLGPLSVKELKQLERQLSVGIERVRSKKRRIISEHINLLKRKHKGLQEEHSRLQKRLNQLKDVAVTTSRTSDANGTSALEMAFQVDGVLI

Homology

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BLAST of Tan0007787 vs. ExPASy Swiss-Prot
Match: Q6EU39 (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS6 PE=1 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.9e-39
Identity = 90/170 (52.94%), Postives = 116/170 (68.24%), Query Frame = 0


Query: 27  MGRGKVELKRIENSTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIFSPSGKAYQFSSH 86
           MGRG+VELKRIEN  +RQVTFSKRRNGLLKKAYELSVLCDAEVAL+IFS  GK Y+F S 
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 87  DMDGTLARYRN-DMGLPQSNHPHSRALFWKSEMEDMKRSINSLEARLRHFAGEDLGPLSV 146
            +  TL RY++       SN+  S    W  EM  +K    +L+   RH  GEDLGPLSV
Sbjct: 61  GITKTLERYQHCCYNAQDSNNALSETQSWYHEMSKLKAKFEALQRTQRHLLGEDLGPLSV 120

Query: 147 KELKQLERQLSVGIERVRSKKRRIISEHINLLKRKHKGLQEEHSRLQKRL 196
           KEL+QLE+QL   + + R +K +++ E +  L+RK + L E + +L+ +L
Sbjct: 121 KELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHKL 170

[Close]

BLAST of Tan0007787 vs. ExPASy Swiss-Prot
Match: Q8LLR1 (Agamous-like MADS-box protein MADS3 OS=Vitis vinifera OX=29760 GN=MADS3 PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 7.1e-39
Identity = 88/169 (52.07%), Postives = 113/169 (66.86%), Query Frame = 0


Query: 27  MGRGKVELKRIENSTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIFSPSGKAYQFSSH 86
           MGRG+VELKRIEN  +RQVTFSKRRNGLLKKAYELSVLCDAEVAL+IFS  GK Y+F S 
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 87  DMDGTLARYRNDMGLPQSNHPHSRALFWKSEMEDMKRSINSLEARLRHFAGEDLGPLSVK 146
               TL RY+     PQ N+       W  E+  +K    SL+   RH  GEDLGPLSVK
Sbjct: 61  GTTKTLERYQRVCYTPQDNNMECETQSWYQEVSKLKAKYESLQRTQRHLLGEDLGPLSVK 120

Query: 147 ELKQLERQLSVGIERVRSKKRRIISEHINLLKRKHKGLQEEHSRLQKRL 196
           EL+ LE+QL   + + R +K +++ E +  L+RK + L + + +L+ +L
Sbjct: 121 ELQNLEKQLEGALAQARQRKTQMMIEQMEDLRRKERQLGDLNKQLKLKL 169

[Close]

BLAST of Tan0007787 vs. ExPASy Swiss-Prot
Match: Q7XUN2 (MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS17 PE=1 SV=2)

HSP 1 Score: 158.7 bits (400), Expect = 7.9e-38
Identity = 90/188 (47.87%), Postives = 121/188 (64.36%), Query Frame = 0


Query: 27  MGRGKVELKRIENSTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIFSPSGKAYQFSSH 86
           MGRG+VELKRIEN  +RQVTFSKRRNGLLKKAYELSVLCDAEVAL+IFS  GK Y+F S 
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 87  DMDGTLARYRNDMGLPQSNH---PHSRALFWKSEMEDMKRSINSLEARLRHFAGEDLGPL 146
            ++ TL +Y +     Q ++          W  EM  +K  +  L+   RH  GEDLGPL
Sbjct: 61  GINKTLEKYNSCCYNAQGSNSALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGPL 120

Query: 147 SVKELKQLERQLSVGIERVRSKKRRIISEHINLLKRKHKGLQEEHSRLQKRLNQLKDVAV 206
           S+KEL+QLE+QL   + + R +K +I+ E ++ L+RK + L E + +L+ +L    D + 
Sbjct: 121 SIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLKNKLEAEADSSN 180

Query: 207 TTSRTSDA 212
             S   D+
Sbjct: 181 CRSAIQDS 188

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BLAST of Tan0007787 vs. ExPASy Swiss-Prot
Match: P29381 (Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana OX=3702 GN=AGL1 PE=1 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 3.3e-36
Identity = 86/197 (43.65%), Postives = 126/197 (63.96%), Query Frame = 0


Query: 25  KKMGRGKVELKRIENSTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIFSPSGKAYQFS 84
           KK+GRGK+E+KRIEN+T+RQVTF KRRNGLLKKAYELSVLCDAEVAL+IFS  G+ Y+++
Sbjct: 14  KKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYA 73

Query: 85  SHDMDGTLARYR---NDMGLPQSNHPHSRALFWKSEMEDMKRSINSLEARLRHFAGEDLG 144
           ++ + GT+ RY+   +D   P S    +   +++ E   ++R I  ++   RH  GE LG
Sbjct: 74  NNSVRGTIERYKKACSDAVNPPS-VTEANTQYYQQEASKLRRQIRDIQNSNRHIVGESLG 133

Query: 145 PLSVKELKQLERQLSVGIERVRSKKRRIISEHINLLKRKHKGLQEEHSRLQKRLNQLKDV 204
            L+ KELK LE +L  GI RVRSKK  ++   I  ++++   LQ  +  L+ ++ +   +
Sbjct: 134 SLNFKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQKREMELQHNNMYLRAKIAEGARL 193

Query: 205 AVTTSRTSDANGTSALE 219
                 +S   GT+  E
Sbjct: 194 NPDQQESSVIQGTTVYE 209

[Close]

BLAST of Tan0007787 vs. ExPASy Swiss-Prot
Match: Q8LLR0 (Agamous-like MADS-box protein MADS4 OS=Vitis vinifera OX=29760 GN=MADS4 PE=2 SV=2)

HSP 1 Score: 153.3 bits (386), Expect = 3.3e-36
Identity = 91/173 (52.60%), Postives = 119/173 (68.79%), Query Frame = 0


Query: 27  MGRGKVELKRIENSTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIFSPSGKAYQF-SS 86
           MGRG+VELKRIEN  +RQVTF+KRRNGLLKKAYELSVLCDAEVAL+IFS  GK Y+F SS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 87  HDMDGTLARYRN-DMGLPQSNHPHSRALFWKSEME--DMKRSINSLEARLRHFAGEDLGP 146
             M  TL RY+  + G P++N     AL   S+ E   +K    +L+   R+  GEDLGP
Sbjct: 61  SSMLKTLERYQKCNYGAPETNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120

Query: 147 LSVKELKQLERQLSVGIERVRSKKRRIISEHINLLKRKHKGLQEEHSRLQKRL 196
           LS KEL+ LERQL V ++++RS + + + + +  L+RK   L E +  L++RL
Sbjct: 121 LSTKELESLERQLDVSLKQIRSTRTQYMLDQLTDLQRKEHMLNEANKTLKQRL 173

[Close]

BLAST of Tan0007787 vs. NCBI nr
Match: XP_038895204.1 (truncated transcription factor CAULIFLOWER D-like isoform X1 [Benincasa hispida])

HSP 1 Score: 365.2 bits (936), Expect = 4.2e-97
Identity = 190/214 (88.79%), Postives = 202/214 (94.39%), Query Frame = 0


Query: 15  FFFSFVSPIGKKMGRGKVELKRIENSTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIF 74
           FF +  +   KKMGRGKVELKRIEN TSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIF
Sbjct: 4   FFLNKNNNKKKKMGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIF 63

Query: 75  SPSGKAYQFSSHDMDGTLARYRNDMGLPQSNHPHSRALFWKSEMEDMKRSINSLEARLRH 134
           SPSGKAYQFSSHDMDGTLARYR D+GLPQSNHPHSRALFWKSE+EDMKRSI+SLEARLRH
Sbjct: 64  SPSGKAYQFSSHDMDGTLARYRTDVGLPQSNHPHSRALFWKSEIEDMKRSISSLEARLRH 123

Query: 135 FAGEDLGPLSVKELKQLERQLSVGIERVRSKKRRIISEHINLLKRKHKGLQEEHSRLQKR 194
           FAGEDL PLSVKELKQLERQ+SVGIER+RSKKRRII+EHINLLKRK+KGLQEEHSRLQKR
Sbjct: 124 FAGEDLEPLSVKELKQLERQMSVGIERIRSKKRRIIAEHINLLKRKYKGLQEEHSRLQKR 183

Query: 195 LNQLKDVAVTTSRTSDANGTSALEMAFQVDGVLI 229
           LNQLKDVAVTTSR SDANG SAL+M FQVDG++I
Sbjct: 184 LNQLKDVAVTTSRISDANGASALDMEFQVDGLMI 217

[Close]

BLAST of Tan0007787 vs. NCBI nr
Match: XP_022137440.1 (truncated transcription factor CAULIFLOWER D-like [Momordica charantia])

HSP 1 Score: 355.1 bits (910), Expect = 4.4e-94
Identity = 184/203 (90.64%), Postives = 196/203 (96.55%), Query Frame = 0


Query: 27  MGRGKVELKRIENSTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIFSPSGKAYQFSSH 86
           MGRGKVELKRIEN TSRQVTFSKRRNGLLKKAYELSVLCDAEVALL+FSPSGKAYQFSSH
Sbjct: 1   MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLVFSPSGKAYQFSSH 60

Query: 87  DMDGTLARYRNDMGLPQSNHPHSRALFWKSEMEDMKRSINSLEARLRHFAGEDLGPLSVK 146
           DMDGTLARYR+DMGLPQSNHPHSR +FWKSEME+M+RSI+SLE+RLRHFAGEDLGPLSVK
Sbjct: 61  DMDGTLARYRSDMGLPQSNHPHSRVMFWKSEMEEMRRSISSLESRLRHFAGEDLGPLSVK 120

Query: 147 ELKQLERQLSVGIERVRSKKRRIISEHINLLKRKHKGLQEEHSRLQKRLNQLKDVAVTTS 206
           +LKQLERQLSVGIERVRSKKRRIISEHIN+LKRK+K +QEEHSRLQKRLNQLKDV VT S
Sbjct: 121 DLKQLERQLSVGIERVRSKKRRIISEHINMLKRKYKSVQEEHSRLQKRLNQLKDVDVTAS 180

Query: 207 RTS-DANGTSALEMAFQVDGVLI 229
           RTS DAN +SALEMAFQVDGVLI
Sbjct: 181 RTSLDANASSALEMAFQVDGVLI 203

[Close]

BLAST of Tan0007787 vs. NCBI nr
Match: XP_038895205.1 (truncated transcription factor CAULIFLOWER D-like isoform X2 [Benincasa hispida])

HSP 1 Score: 352.4 bits (903), Expect = 2.8e-93
Identity = 184/205 (89.76%), Postives = 194/205 (94.63%), Query Frame = 0


Query: 15  FFFSFVSPIGKKMGRGKVELKRIENSTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIF 74
           FF +  +   KKMGRGKVELKRIEN TSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIF
Sbjct: 4   FFLNKNNNKKKKMGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIF 63

Query: 75  SPSGKAYQFSSHDMDGTLARYRNDMGLPQSNHPHSRALFWKSEMEDMKRSINSLEARLRH 134
           SPSGKAYQFSSHDMDGTLARYR D+GLPQSNHPHSRALFWKSE+EDMKRSI+SLEARLRH
Sbjct: 64  SPSGKAYQFSSHDMDGTLARYRTDVGLPQSNHPHSRALFWKSEIEDMKRSISSLEARLRH 123

Query: 135 FAGEDLGPLSVKELKQLERQLSVGIERVRSKKRRIISEHINLLKRKHKGLQEEHSRLQKR 194
           FAGEDL PLSVKELKQLERQ+SVGIER+RSKKRRII+EHINLLKRK+KGLQEEHSRLQKR
Sbjct: 124 FAGEDLEPLSVKELKQLERQMSVGIERIRSKKRRIIAEHINLLKRKYKGLQEEHSRLQKR 183

Query: 195 LNQLKDVAVTTSRTSDANGTSALEM 220
           LNQLKDVAVTTSR SDANG SAL+M
Sbjct: 184 LNQLKDVAVTTSRISDANGASALDM 208

[Close]

BLAST of Tan0007787 vs. NCBI nr
Match: XP_023001170.1 (MADS-box transcription factor 6-like [Cucurbita maxima])

HSP 1 Score: 347.4 bits (890), Expect = 9.1e-92
Identity = 179/200 (89.50%), Postives = 191/200 (95.50%), Query Frame = 0


Query: 27  MGRGKVELKRIENSTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIFSPSGKAYQFSSH 86
           MGRGKV+LKRIEN TSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIFSPSGKAYQFSSH
Sbjct: 1   MGRGKVQLKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIFSPSGKAYQFSSH 60

Query: 87  DMDGTLARYRNDMGLPQSNHPHSRALFWKSEMEDMKRSINSLEARLRHFAGEDLGPLSVK 146
           DMDGTLARYR+D+GLPQSNHPHSRAL WKSEMEDMKRSI SL+ARLR+FAGEDLGPLS+K
Sbjct: 61  DMDGTLARYRSDVGLPQSNHPHSRALLWKSEMEDMKRSIISLDARLRNFAGEDLGPLSLK 120

Query: 147 ELKQLERQLSVGIERVRSKKRRIISEHINLLKRKHKGLQEEHSRLQKRLNQLKDVAVTTS 206
           ELKQLERQ+S+GIERVRSKKRRI SEH+N LKRK+KGLQEEHSRLQKRLNQLKDVAVTTS
Sbjct: 121 ELKQLERQMSIGIERVRSKKRRITSEHVNQLKRKYKGLQEEHSRLQKRLNQLKDVAVTTS 180

Query: 207 RTSDANGTSALEMAFQVDGV 227
           R SDAN  SA EMAFQV+G+
Sbjct: 181 RISDANAFSAFEMAFQVNGL 200

[Close]

BLAST of Tan0007787 vs. NCBI nr
Match: XP_004145150.1 (truncated transcription factor CAULIFLOWER D [Cucumis sativus] >KAE8652629.1 hypothetical protein Csa_013390 [Cucumis sativus] >BAB21509.1 putative MADS-box protein [Cucumis sativus])

HSP 1 Score: 346.3 bits (887), Expect = 2.0e-91
Identity = 179/203 (88.18%), Postives = 193/203 (95.07%), Query Frame = 0


Query: 27  MGRGKVELKRIENSTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIFSPSGKAYQFSSH 86
           MGRGKVELKRIEN TSRQVTFSKRRNGLLKKAYELSVLCDA+VALLIFSPSGKAYQFSSH
Sbjct: 1   MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAQVALLIFSPSGKAYQFSSH 60

Query: 87  DMDGTLARYRNDMGLPQSNHPHSRALFWKSEMEDMKRSINSLEARLRHFAGEDLGPLSVK 146
           DMDGTLARYR D+GLPQSNHPHSRALFWK+EM+DMKRSI+S+EARLRHF GEDL PL+VK
Sbjct: 61  DMDGTLARYRTDVGLPQSNHPHSRALFWKTEMDDMKRSISSMEARLRHFVGEDLEPLNVK 120

Query: 147 ELKQLERQLSVGIERVRSKKRRIISEHINLLKRKHKGLQEEHSRLQKRLNQLKDVAVT-T 206
           ELKQLERQ+SVGIER+RSKKRRII+EHINLLKRK+KGLQEEHSRLQKRLNQLKDV VT +
Sbjct: 121 ELKQLERQMSVGIERIRSKKRRIIAEHINLLKRKYKGLQEEHSRLQKRLNQLKDVVVTNS 180

Query: 207 SRTSDANGTSALEMAFQVDGVLI 229
           SR SDAN  SALE+ FQVDG+LI
Sbjct: 181 SRNSDANPASALEIEFQVDGLLI 203

[Close]

BLAST of Tan0007787 vs. ExPASy TrEMBL
Match: A0A6J1C6N3 (truncated transcription factor CAULIFLOWER D-like OS=Momordica charantia OX=3673 GN=LOC111008884 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 2.1e-94
Identity = 184/203 (90.64%), Postives = 196/203 (96.55%), Query Frame = 0


Query: 27  MGRGKVELKRIENSTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIFSPSGKAYQFSSH 86
           MGRGKVELKRIEN TSRQVTFSKRRNGLLKKAYELSVLCDAEVALL+FSPSGKAYQFSSH
Sbjct: 1   MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLVFSPSGKAYQFSSH 60

Query: 87  DMDGTLARYRNDMGLPQSNHPHSRALFWKSEMEDMKRSINSLEARLRHFAGEDLGPLSVK 146
           DMDGTLARYR+DMGLPQSNHPHSR +FWKSEME+M+RSI+SLE+RLRHFAGEDLGPLSVK
Sbjct: 61  DMDGTLARYRSDMGLPQSNHPHSRVMFWKSEMEEMRRSISSLESRLRHFAGEDLGPLSVK 120

Query: 147 ELKQLERQLSVGIERVRSKKRRIISEHINLLKRKHKGLQEEHSRLQKRLNQLKDVAVTTS 206
           +LKQLERQLSVGIERVRSKKRRIISEHIN+LKRK+K +QEEHSRLQKRLNQLKDV VT S
Sbjct: 121 DLKQLERQLSVGIERVRSKKRRIISEHINMLKRKYKSVQEEHSRLQKRLNQLKDVDVTAS 180

Query: 207 RTS-DANGTSALEMAFQVDGVLI 229
           RTS DAN +SALEMAFQVDGVLI
Sbjct: 181 RTSLDANASSALEMAFQVDGVLI 203

[Close]

BLAST of Tan0007787 vs. ExPASy TrEMBL
Match: A0A6J1KKG0 (MADS-box transcription factor 6-like OS=Cucurbita maxima OX=3661 GN=LOC111495387 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 4.4e-92
Identity = 179/200 (89.50%), Postives = 191/200 (95.50%), Query Frame = 0


Query: 27  MGRGKVELKRIENSTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIFSPSGKAYQFSSH 86
           MGRGKV+LKRIEN TSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIFSPSGKAYQFSSH
Sbjct: 1   MGRGKVQLKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIFSPSGKAYQFSSH 60

Query: 87  DMDGTLARYRNDMGLPQSNHPHSRALFWKSEMEDMKRSINSLEARLRHFAGEDLGPLSVK 146
           DMDGTLARYR+D+GLPQSNHPHSRAL WKSEMEDMKRSI SL+ARLR+FAGEDLGPLS+K
Sbjct: 61  DMDGTLARYRSDVGLPQSNHPHSRALLWKSEMEDMKRSIISLDARLRNFAGEDLGPLSLK 120

Query: 147 ELKQLERQLSVGIERVRSKKRRIISEHINLLKRKHKGLQEEHSRLQKRLNQLKDVAVTTS 206
           ELKQLERQ+S+GIERVRSKKRRI SEH+N LKRK+KGLQEEHSRLQKRLNQLKDVAVTTS
Sbjct: 121 ELKQLERQMSIGIERVRSKKRRITSEHVNQLKRKYKGLQEEHSRLQKRLNQLKDVAVTTS 180

Query: 207 RTSDANGTSALEMAFQVDGV 227
           R SDAN  SA EMAFQV+G+
Sbjct: 181 RISDANAFSAFEMAFQVNGL 200

[Close]

BLAST of Tan0007787 vs. ExPASy TrEMBL
Match: Q9AYR8 (Putative MADS-box protein OS=Cucumis sativus OX=3659 GN=ERAF17 PE=2 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 9.9e-92
Identity = 179/203 (88.18%), Postives = 193/203 (95.07%), Query Frame = 0


Query: 27  MGRGKVELKRIENSTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIFSPSGKAYQFSSH 86
           MGRGKVELKRIEN TSRQVTFSKRRNGLLKKAYELSVLCDA+VALLIFSPSGKAYQFSSH
Sbjct: 1   MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAQVALLIFSPSGKAYQFSSH 60

Query: 87  DMDGTLARYRNDMGLPQSNHPHSRALFWKSEMEDMKRSINSLEARLRHFAGEDLGPLSVK 146
           DMDGTLARYR D+GLPQSNHPHSRALFWK+EM+DMKRSI+S+EARLRHF GEDL PL+VK
Sbjct: 61  DMDGTLARYRTDVGLPQSNHPHSRALFWKTEMDDMKRSISSMEARLRHFVGEDLEPLNVK 120

Query: 147 ELKQLERQLSVGIERVRSKKRRIISEHINLLKRKHKGLQEEHSRLQKRLNQLKDVAVT-T 206
           ELKQLERQ+SVGIER+RSKKRRII+EHINLLKRK+KGLQEEHSRLQKRLNQLKDV VT +
Sbjct: 121 ELKQLERQMSVGIERIRSKKRRIIAEHINLLKRKYKGLQEEHSRLQKRLNQLKDVVVTNS 180

Query: 207 SRTSDANGTSALEMAFQVDGVLI 229
           SR SDAN  SALE+ FQVDG+LI
Sbjct: 181 SRNSDANPASALEIEFQVDGLLI 203

[Close]

BLAST of Tan0007787 vs. ExPASy TrEMBL
Match: A0A6J1E6Y4 (truncated transcription factor CAULIFLOWER D-like OS=Cucurbita moschata OX=3662 GN=LOC111431347 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.9e-91
Identity = 180/200 (90.00%), Postives = 190/200 (95.00%), Query Frame = 0


Query: 27  MGRGKVELKRIENSTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIFSPSGKAYQFSSH 86
           MGRGKV+LKRIEN TSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIFSPSGKAYQFSSH
Sbjct: 1   MGRGKVQLKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIFSPSGKAYQFSSH 60

Query: 87  DMDGTLARYRNDMGLPQSNHPHSRALFWKSEMEDMKRSINSLEARLRHFAGEDLGPLSVK 146
           DMDGTLARYR+D+GLPQSNHPHSRAL WKSEMEDMKRSI SL+ARLR+FAGEDLG LS+K
Sbjct: 61  DMDGTLARYRSDVGLPQSNHPHSRALVWKSEMEDMKRSIISLDARLRNFAGEDLGLLSLK 120

Query: 147 ELKQLERQLSVGIERVRSKKRRIISEHINLLKRKHKGLQEEHSRLQKRLNQLKDVAVTTS 206
           ELKQLERQ+SVGIERVRSKKRRI SEHIN LKRK+KGLQEEHSRLQKRLNQLKDV VTTS
Sbjct: 121 ELKQLERQMSVGIERVRSKKRRITSEHINQLKRKYKGLQEEHSRLQKRLNQLKDVGVTTS 180

Query: 207 RTSDANGTSALEMAFQVDGV 227
           R SDAN  SAL+MAFQVDG+
Sbjct: 181 RISDANAFSALDMAFQVDGL 200

[Close]

BLAST of Tan0007787 vs. ExPASy TrEMBL
Match: Q9M3U2 (Putative transcription factor (Fragment) OS=Cucumis sativus OX=3659 GN=cus3 PE=2 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 7.1e-90
Identity = 176/200 (88.00%), Postives = 190/200 (95.00%), Query Frame = 0


Query: 30  GKVELKRIENSTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIFSPSGKAYQFSSHDMD 89
           GKVELKRIEN TSRQVTFSKRRNGLLKKAYELSVLCDA+VALLIFSPSGKAYQFSSHDMD
Sbjct: 1   GKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAQVALLIFSPSGKAYQFSSHDMD 60

Query: 90  GTLARYRNDMGLPQSNHPHSRALFWKSEMEDMKRSINSLEARLRHFAGEDLGPLSVKELK 149
           GTLARYR D+GLPQSNHPHSRALFWK+EM+DMKRSI+S+EARLRHF GEDL PL+VKELK
Sbjct: 61  GTLARYRTDVGLPQSNHPHSRALFWKTEMDDMKRSISSMEARLRHFVGEDLEPLNVKELK 120

Query: 150 QLERQLSVGIERVRSKKRRIISEHINLLKRKHKGLQEEHSRLQKRLNQLKDVAVT-TSRT 209
           QLERQ+SVGIER+RSKKRRII+EHINLLKRK+KGLQEEHSRLQKRLNQLKDV VT +SR 
Sbjct: 121 QLERQMSVGIERIRSKKRRIIAEHINLLKRKYKGLQEEHSRLQKRLNQLKDVVVTNSSRN 180

Query: 210 SDANGTSALEMAFQVDGVLI 229
           SDAN  SALE+ FQVDG+LI
Sbjct: 181 SDANPASALEIEFQVDGLLI 200

[Close]

BLAST of Tan0007787 vs. TAIR 10
Match: AT3G58780.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 153.3 bits (386), Expect = 2.4e-37
Identity = 86/197 (43.65%), Postives = 126/197 (63.96%), Query Frame = 0


Query: 25  KKMGRGKVELKRIENSTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIFSPSGKAYQFS 84
           KK+GRGK+E+KRIEN+T+RQVTF KRRNGLLKKAYELSVLCDAEVAL+IFS  G+ Y+++
Sbjct: 14  KKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYA 73

Query: 85  SHDMDGTLARYR---NDMGLPQSNHPHSRALFWKSEMEDMKRSINSLEARLRHFAGEDLG 144
           ++ + GT+ RY+   +D   P S    +   +++ E   ++R I  ++   RH  GE LG
Sbjct: 74  NNSVRGTIERYKKACSDAVNPPS-VTEANTQYYQQEASKLRRQIRDIQNSNRHIVGESLG 133

Query: 145 PLSVKELKQLERQLSVGIERVRSKKRRIISEHINLLKRKHKGLQEEHSRLQKRLNQLKDV 204
            L+ KELK LE +L  GI RVRSKK  ++   I  ++++   LQ  +  L+ ++ +   +
Sbjct: 134 SLNFKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQKREMELQHNNMYLRAKIAEGARL 193

Query: 205 AVTTSRTSDANGTSALE 219
                 +S   GT+  E
Sbjct: 194 NPDQQESSVIQGTTVYE 209

[Close]

BLAST of Tan0007787 vs. TAIR 10
Match: AT1G26310.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 152.5 bits (384), Expect = 4.0e-37
Identity = 86/183 (46.99%), Postives = 122/183 (66.67%), Query Frame = 0


Query: 27  MGRGKVELKRIENSTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIFSPSGKAYQFSSH 86
           MGRG+VELKRIEN  +RQVTFSKRR GLLKKA E+SVLCDAEV+L++FS  GK +++SS 
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSE 60

Query: 87  D-MDGTLARY-RNDMGLPQSNHPHSRA---LFWKSEMEDMKRSINSLEARLRHFAGEDLG 146
             M+  L RY R      Q   P S       W  E   +K  I  LE   RH+ GE+L 
Sbjct: 61  SCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELE 120

Query: 147 PLSVKELKQLERQLSVGIERVRSKKRRIISEHINLLKRKHKGLQEEHSRLQKRLNQLKDV 205
           P+S+K+L+ LE+QL   ++ +RS+K ++++E +N L+RK K +QEE+S L K++ + +++
Sbjct: 121 PMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERENI 180

[Close]

BLAST of Tan0007787 vs. TAIR 10
Match: AT2G42830.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 152.5 bits (384), Expect = 4.0e-37
Identity = 82/181 (45.30%), Postives = 120/181 (66.30%), Query Frame = 0


Query: 20  VSPIGKKMGRGKVELKRIENSTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIFSPSGK 79
           V+   KK+GRGK+E+KRIEN+T+RQVTF KRRNGLLKKAYELSVLCDAEVAL+IFS  G+
Sbjct: 9   VAESSKKIGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGR 68

Query: 80  AYQFSSHDMDGTLARYRNDMGLPQSNHP---HSRALFWKSEMEDMKRSINSLEARLRHFA 139
            Y+++++ + GT+ RY+        N P    +   +++ E   ++R I  ++   RH  
Sbjct: 69  LYEYANNSVRGTIERYKKACS-DAVNPPTITEANTQYYQQEASKLRRQIRDIQNLNRHIL 128

Query: 140 GEDLGPLSVKELKQLERQLSVGIERVRSKKRRIISEHINLLKRKHKGLQEEHSRLQKRLN 198
           GE LG L+ KELK LE +L  GI RVRSKK  ++   I  ++++   LQ ++  L+ ++ 
Sbjct: 129 GESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKREIELQNDNMYLRSKIT 188

[Close]

BLAST of Tan0007787 vs. TAIR 10
Match: AT1G24260.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 151.0 bits (380), Expect = 1.2e-36
Identity = 89/174 (51.15%), Postives = 119/174 (68.39%), Query Frame = 0


Query: 27  MGRGKVELKRIENSTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIFSPSGKAYQF-SS 86
           MGRG+VELKRIEN  +RQVTF+KRRNGLLKKAYELSVLCDAEVAL+IFS  GK Y+F SS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 87  HDMDGTLARYRN-DMGLPQSNHPHSRALFWKSEMED---MKRSINSLEARLRHFAGEDLG 146
             M  TL RY+  + G P+ N P   AL   S  ++   +K   ++L+   R+  GEDLG
Sbjct: 61  SSMLRTLERYQKCNYGAPEPNVPSREALAELSSQQEYLKLKERYDALQRTQRNLLGEDLG 120

Query: 147 PLSVKELKQLERQLSVGIERVRSKKRRIISEHINLLKRKHKGLQEEHSRLQKRL 196
           PLS KEL+ LERQL   ++++R+ + + + + +N L+ K + L E +  L+ RL
Sbjct: 121 PLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRL 174

[Close]

BLAST of Tan0007787 vs. TAIR 10
Match: AT2G42830.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 150.2 bits (378), Expect = 2.0e-36
Identity = 81/178 (45.51%), Postives = 118/178 (66.29%), Query Frame = 0


Query: 20  VSPIGKKMGRGKVELKRIENSTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIFSPSGK 79
           V+   KK+GRGK+E+KRIEN+T+RQVTF KRRNGLLKKAYELSVLCDAEVAL+IFS  G+
Sbjct: 9   VAESSKKIGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGR 68

Query: 80  AYQFSSHDMDGTLARYRNDMGLPQSNHP---HSRALFWKSEMEDMKRSINSLEARLRHFA 139
            Y+++++ + GT+ RY+        N P    +   +++ E   ++R I  ++   RH  
Sbjct: 69  LYEYANNSVRGTIERYKKACS-DAVNPPTITEANTQYYQQEASKLRRQIRDIQNLNRHIL 128

Query: 140 GEDLGPLSVKELKQLERQLSVGIERVRSKKRRIISEHINLLKRKHKGLQEEHSRLQKR 195
           GE LG L+ KELK LE +L  GI RVRSKK  ++   I  ++++ K ++ ++  +  R
Sbjct: 129 GESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKRVKEIELQNDNMYLR 185

The following BLAST results are available for this feature:

BLAST of Tan0007787 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6EU39	1.9e-39	52.94	MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS...	[more]
Q8LLR1	7.1e-39	52.07	Agamous-like MADS-box protein MADS3 OS=Vitis vinifera OX=29760 GN=MADS3 PE=2 SV=...	[more]
Q7XUN2	7.9e-38	47.87	MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD...	[more]
P29381	3.3e-36	43.65	Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana OX=3702 GN=AGL1 PE=1 ...	[more]
Q8LLR0	3.3e-36	52.60	Agamous-like MADS-box protein MADS4 OS=Vitis vinifera OX=29760 GN=MADS4 PE=2 SV=...	[more]

BLAST of Tan0007787 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895204.1	4.2e-97	88.79	truncated transcription factor CAULIFLOWER D-like isoform X1 [Benincasa hispida]	[more]
XP_022137440.1	4.4e-94	90.64	truncated transcription factor CAULIFLOWER D-like [Momordica charantia]	[more]
XP_038895205.1	2.8e-93	89.76	truncated transcription factor CAULIFLOWER D-like isoform X2 [Benincasa hispida]	[more]
XP_023001170.1	9.1e-92	89.50	MADS-box transcription factor 6-like [Cucurbita maxima]	[more]
XP_004145150.1	2.0e-91	88.18	truncated transcription factor CAULIFLOWER D [Cucumis sativus] >KAE8652629.1 hyp...	[more]

BLAST of Tan0007787 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C6N3	2.1e-94	90.64	truncated transcription factor CAULIFLOWER D-like OS=Momordica charantia OX=3673...	[more]
A0A6J1KKG0	4.4e-92	89.50	MADS-box transcription factor 6-like OS=Cucurbita maxima OX=3661 GN=LOC111495387...	[more]
Q9AYR8	9.9e-92	88.18	Putative MADS-box protein OS=Cucumis sativus OX=3659 GN=ERAF17 PE=2 SV=1	[more]
A0A6J1E6Y4	2.9e-91	90.00	truncated transcription factor CAULIFLOWER D-like OS=Cucurbita moschata OX=3662 ...	[more]
Q9M3U2	7.1e-90	88.00	Putative transcription factor (Fragment) OS=Cucumis sativus OX=3659 GN=cus3 PE=2...	[more]

BLAST of Tan0007787 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G58780.1	2.4e-37	43.65	K-box region and MADS-box transcription factor family protein	[more]
AT1G26310.1	4.0e-37	46.99	K-box region and MADS-box transcription factor family protein	[more]
AT2G42830.1	4.0e-37	45.30	K-box region and MADS-box transcription factor family protein	[more]
AT1G24260.1	1.2e-36	51.15	K-box region and MADS-box transcription factor family protein	[more]
AT2G42830.2	2.0e-36	45.51	K-box region and MADS-box transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 174..194
None	No IPR available	COILS	Coil	Coil	coord: 111..138
None	No IPR available	PANTHER	PTHR48019	SERUM RESPONSE FACTOR HOMOLOG	coord: 27..209
None	No IPR available	PANTHER	PTHR48019:SF68	SUBFAMILY NOT NAMED	coord: 27..209
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 49..64 score: 86.34 coord: 29..49 score: 69.09 coord: 64..85 score: 57.09
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 27..86 e-value: 5.6E-42 score: 155.5
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 36..83 e-value: 5.2E-27 score: 93.1
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 27..87 score: 32.814335
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 110..195 e-value: 1.7E-24 score: 85.8
IPR002487	Transcription factor, K-box	PROSITE	PS51297	K_BOX	coord: 111..203 score: 13.874443
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 39..108 e-value: 1.2E-28 score: 100.7
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 28..117
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 28..98 e-value: 4.55359E-42 score: 135.372

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0007787.1	Tan0007787.1	mRNA
Tan0007787.2	Tan0007787.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding