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Tan0007672 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCGTGGTGGAAACGGATTCTTGCTGCCTTCCTCCAAAAATCTCTATAAATACTTCCCATACCCGCTCTTAATTCTCTCATAAGAATTCTGAAATTGTTCTCTCTGTTCTTCTTCTTTCTTTTCTTGATCTCTCTACGCGCTTCGGCGTTTCCCCTTCTCGTAAGTCTCTGATTCCTTCAGATTGTGTGTTTGTTCGCCTTTAATTTGTGTTTCTGTTCTTCTCTCTGGATTTTGCCTTCTGGGTTCGTCTTTTTGTTGCTTTGATTTGTGGTTTGTGTTTACTTGGCTTCATGATTTGATGATCGTTTGAAGATTTCAATTGGGTTCTGATTCTGGTATTGGGTTCGTTTAGGGAAGCCATGGATGATCTGGGGTTTTGTTTTCTCTGTGTTTCGTGTTTAGGGTTTATGTCTATTTGGTTAGATGATTCATTGTTTTCTTATATGTTGTGAAGATTCTGGAGCCAGGGATGAATTGGGTATACGTTTTTGCTAATTGGGATTCGTTATCTTGGACCTGAATTCCCGTTTATGGAGATCATGGATGATCTGGGGTTTTGTTTTCTGGGTGTTTCGTTGTTTGATGTTTAGGGTTTTTTGTATTTAGTTAGATGATTCTGTTGTTTCTTATATGTTCTGAAGATTCTGGAGCCATGGATGAATAGGATATACGCTTTTGCTAACTGGGATTCGTTATCTTGGACCTGAATTCCTGTTTTACTCTGAGATTTCTGTTGCTGGCTTCATTGCTAGTGGGAACTTGCATCTAAACATGTATTTCTTTTTTTAATTTTCAGATTCTCGGTTGTTGTTTAGTTTAAACCAAACAAGGTTAATTCATGGTTGAATTAGACTTGGAAATCCCATCTGCTTTCGATCCATTCGCAGACGCCAAGGATTCTGATGCCCCCGGAACTAAAGAGTATGTTCATATCCGCGTGCAGCAAAGGAATGGAAAAAAGTGCTTAACAACAGTGCAGGGTCTGAAGAAAGACTTGAGCTACGAGAAGATCCTCAAAGACTTGAAAAAGGAATTCTGCTGTAATGGTAACGTGGTCCAAGACAAAGAATTGGGGAAGATAATTCAACTTCAAGGCGATCAGCGCAAGAACGTCTCTCAATTCCTTGTTCAGGCTGGTATTGTCAGGAAGGATCGGATCAAGATCCATGGATTTTAAGCTTTTTTTTTTCTTGTTTGCTGTGTCTTTAAGAGTCTCTTGTTTTAATGCTTTGATTTGCTTTTGTGGGGGCTTTAGTATTTAGTTAGTAGAGTCTTTTGTCTTTGTTGTTGGTTTCTTTTCTTTTTTCAATGGATGGTTTGATGGTGCTGTGTGATGGAAACTTTTTGTCAATAAAATGTTTGATTCTGAGTATTTGCTTTGAAACTTTTGTAGTTTAATTTGACTGTTTGGGGGTACAAAGTGCCCTTGACCCCAACCATTCCAAGTCCTTGAGGGGGTCAAAAGAAGAATATTCAGTCTCAAATTATTAAAATATTCATTCCCAAGTCTAAATTATATAAAAAAATATTCTAACTTAACTTCAATGAGTAGGAGAATAATTGATGTGACCCAACATTTTAACTTATTTG TTCGTGGTGGAAACGGATTCTTGCTGCCTTCCTCCAAAAATCTCTATAAATACTTCCCATACCCGCTCTTAATTCTCTCATAAGAATTCTGAAATTGTTCTCTCTGTTCTTCTTCTTTCTTTTCTTGATCTCTCTACGCGCTTCGGCGTTTCCCCTTCTCATTCTCGGTTGTTGTTTAGTTTAAACCAAACAAGGTTAATTCATGGTTGAATTAGACTTGGAAATCCCATCTGCTTTCGATCCATTCGCAGACGCCAAGGATTCTGATGCCCCCGGAACTAAAGAGTATGTTCATATCCGCGTGCAGCAAAGGAATGGAAAAAAGTGCTTAACAACAGTGCAGGGTCTGAAGAAAGACTTGAGCTACGAGAAGATCCTCAAAGACTTGAAAAAGGAATTCTGCTGTAATGGTAACGTGGTCCAAGACAAAGAATTGGGGAAGATAATTCAACTTCAAGGCGATCAGCGCAAGAACGTCTCTCAATTCCTTGTTCAGGCTGGTATTGTCAGGAAGGATCGGATCAAGATCCATGGATTTTAAGCTTTTTTTTTTCTTGTTTGCTGTGTCTTTAAGAGTCTCTTGTTTTAATGCTTTGATTTGCTTTTGTGGGGGCTTTAGTATTTAGTTAGTAGAGTCTTTTGTCTTTGTTGTTGGTTTCTTTTCTTTTTTCAATGGATGGTTTGATGGTGCTGTGTGATGGAAACTTTTTGTCAATAAAATGTTTGATTCTGAGTATTTGCTTTGAAACTTTTGTAGTTTAATTTGACTGTTTGGGGGTACAAAGTGCCCTTGACCCCAACCATTCCAAGTCCTTGAGGGGGTCAAAAGAAGAATATTCAGTCTCAAATTATTAAAATATTCATTCCCAAGTCTAAATTATATAAAAAAATATTCTAACTTAACTTCAATGAGTAGGAGAATAATTGATGTGACCCAACATTTTAACTTATTTG ATGGTTGAATTAGACTTGGAAATCCCATCTGCTTTCGATCCATTCGCAGACGCCAAGGATTCTGATGCCCCCGGAACTAAAGAGTATGTTCATATCCGCGTGCAGCAAAGGAATGGAAAAAAGTGCTTAACAACAGTGCAGGGTCTGAAGAAAGACTTGAGCTACGAGAAGATCCTCAAAGACTTGAAAAAGGAATTCTGCTGTAATGGTAACGTGGTCCAAGACAAAGAATTGGGGAAGATAATTCAACTTCAAGGCGATCAGCGCAAGAACGTCTCTCAATTCCTTGTTCAGGCTGGTATTGTCAGGAAGGATCGGATCAAGATCCATGGATTTTAA MVELDLEIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKDLSYEKILKDLKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVRKDRIKIHGF Homology
BLAST of Tan0007672 vs. ExPASy Swiss-Prot
Match: P41568 (Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At4g27130 PE=1 SV=2) HSP 1 Score: 181.4 bits (459), Expect = 5.6e-45 Identity = 89/113 (78.76%), Postives = 99/113 (87.61%), Query Frame = 0
BLAST of Tan0007672 vs. ExPASy Swiss-Prot
Match: Q94JV4 (Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g54290 PE=3 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 1.2e-44 Identity = 87/113 (76.99%), Postives = 100/113 (88.50%), Query Frame = 0
BLAST of Tan0007672 vs. ExPASy Swiss-Prot
Match: Q9SQF4 (Protein translation factor SUI1 homolog OS=Brassica oleracea OX=3712 PE=3 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 2.8e-44 Identity = 88/113 (77.88%), Postives = 99/113 (87.61%), Query Frame = 0
BLAST of Tan0007672 vs. ExPASy Swiss-Prot
Match: O82569 (Protein translation factor SUI1 homolog OS=Pimpinella brachycarpa OX=45043 PE=3 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 4.7e-44 Identity = 85/113 (75.22%), Postives = 102/113 (90.27%), Query Frame = 0
BLAST of Tan0007672 vs. ExPASy Swiss-Prot
Match: P56330 (Protein translation factor SUI1 homolog OS=Zea mays OX=4577 GN=TIF PE=3 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 8.1e-44 Identity = 85/115 (73.91%), Postives = 100/115 (86.96%), Query Frame = 0
BLAST of Tan0007672 vs. NCBI nr
Match: XP_004139787.1 (protein translation factor SUI1 homolog 1 [Cucumis sativus] >XP_008447738.1 PREDICTED: protein translation factor SUI1 homolog 1-like [Cucumis melo] >XP_038899382.1 protein translation factor SUI1 homolog 1-like [Benincasa hispida] >KGN44162.1 hypothetical protein Csa_015864 [Cucumis sativus]) HSP 1 Score: 216.9 bits (551), Expect = 9.2e-53 Identity = 104/112 (92.86%), Postives = 110/112 (98.21%), Query Frame = 0
BLAST of Tan0007672 vs. NCBI nr
Match: KAA0025154.1 (SUI1 domain-containing protein [Cucumis melo var. makuwa] >TYK23112.1 SUI1 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 216.9 bits (551), Expect = 9.2e-53 Identity = 104/112 (92.86%), Postives = 110/112 (98.21%), Query Frame = 0
BLAST of Tan0007672 vs. NCBI nr
Match: XP_022940170.1 (protein translation factor SUI1 homolog 2-like [Cucurbita moschata] >XP_022981656.1 protein translation factor SUI1 homolog 2-like [Cucurbita maxima] >XP_022981658.1 protein translation factor SUI1 homolog 2-like [Cucurbita maxima] >XP_023525155.1 protein translation factor SUI1 homolog 2-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023525156.1 protein translation factor SUI1 homolog 2-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023525157.1 protein translation factor SUI1 homolog 2-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 214.9 bits (546), Expect = 3.5e-52 Identity = 103/112 (91.96%), Postives = 110/112 (98.21%), Query Frame = 0
BLAST of Tan0007672 vs. NCBI nr
Match: KAF3453464.1 (hypothetical protein FNV43_RR03904 [Rhamnella rubrinervis]) HSP 1 Score: 214.9 bits (546), Expect = 3.5e-52 Identity = 104/112 (92.86%), Postives = 109/112 (97.32%), Query Frame = 0
BLAST of Tan0007672 vs. NCBI nr
Match: KAG7015195.1 (Protein translation factor SUI1-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 214.9 bits (546), Expect = 3.5e-52 Identity = 103/112 (91.96%), Postives = 110/112 (98.21%), Query Frame = 0
BLAST of Tan0007672 vs. ExPASy TrEMBL
Match: A0A5D3DHR8 (SUI1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G001030 PE=3 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 4.4e-53 Identity = 104/112 (92.86%), Postives = 110/112 (98.21%), Query Frame = 0
BLAST of Tan0007672 vs. ExPASy TrEMBL
Match: A0A0A0K771 (SUI1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G209580 PE=3 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 4.4e-53 Identity = 104/112 (92.86%), Postives = 110/112 (98.21%), Query Frame = 0
BLAST of Tan0007672 vs. ExPASy TrEMBL
Match: A0A1S3BI45 (protein translation factor SUI1 homolog 1-like OS=Cucumis melo OX=3656 GN=LOC103490142 PE=3 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 4.4e-53 Identity = 104/112 (92.86%), Postives = 110/112 (98.21%), Query Frame = 0
BLAST of Tan0007672 vs. ExPASy TrEMBL
Match: A0A6J1IX56 (protein translation factor SUI1 homolog 2-like OS=Cucurbita maxima OX=3661 GN=LOC111480714 PE=3 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 1.7e-52 Identity = 103/112 (91.96%), Postives = 110/112 (98.21%), Query Frame = 0
BLAST of Tan0007672 vs. ExPASy TrEMBL
Match: A0A5D3BUS5 (SUI1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00240 PE=3 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 1.7e-52 Identity = 102/112 (91.07%), Postives = 111/112 (99.11%), Query Frame = 0
BLAST of Tan0007672 vs. TAIR 10
Match: AT5G54940.1 (Translation initiation factor SUI1 family protein ) HSP 1 Score: 198.7 bits (504), Expect = 2.4e-51 Identity = 94/112 (83.93%), Postives = 105/112 (93.75%), Query Frame = 0
BLAST of Tan0007672 vs. TAIR 10
Match: AT5G54940.2 (Translation initiation factor SUI1 family protein ) HSP 1 Score: 198.7 bits (504), Expect = 2.4e-51 Identity = 94/112 (83.93%), Postives = 105/112 (93.75%), Query Frame = 0
BLAST of Tan0007672 vs. TAIR 10
Match: AT4G27130.1 (Translation initiation factor SUI1 family protein ) HSP 1 Score: 181.4 bits (459), Expect = 4.0e-46 Identity = 89/113 (78.76%), Postives = 99/113 (87.61%), Query Frame = 0
BLAST of Tan0007672 vs. TAIR 10
Match: AT5G54760.1 (Translation initiation factor SUI1 family protein ) HSP 1 Score: 181.0 bits (458), Expect = 5.2e-46 Identity = 89/113 (78.76%), Postives = 99/113 (87.61%), Query Frame = 0
BLAST of Tan0007672 vs. TAIR 10
Match: AT5G54760.2 (Translation initiation factor SUI1 family protein ) HSP 1 Score: 181.0 bits (458), Expect = 5.2e-46 Identity = 89/113 (78.76%), Postives = 99/113 (87.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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