Tan0007613 (gene) Snake gourd v1

Overview


Name	Tan0007613
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	CCHC-type domain-containing protein
Location	LG06: 8302549 .. 8303709 (-)
RNA-Seq Expression	Tan0007613
Synteny	Tan0007613

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACCAGGATGATTTGATCGCGGATTGGGGCAAATTGAATCTAACTACAGAAGAGGAAGAGGTCTCTGTTGATGTACGAGTTGGAACCGGACAGACTACGGATTTGCTCTTTGAAGGCTGTATGGTTGGGAAGCTCTTATCCCCGAGGATTGTTTCAGCAGAGGTAATCCGAAAAACTTTTAAAGCAGCTTGGAAGATTGAGAATGGATTAGAAGTTGAAGTGATAGGGAAAAACCAATTCATCTTTCGATTTCCTAGTGAATTAGATCGAATCAGAGTTGTTCGCAATGGCCCCTGGCTGTTTGATAGGTTTTTGCTAGTCTTGGTAAAACCACAACCTTTTGTTAAACCATCTGAGATGCAATTTGATTATGTGGCTTTCTGGGTTCACTTTCTTGACATTCCATTAAACTGTTATAACAAAGAGATGGTCGAGAGTTTGGGCAATGCAATGGGGATGTTTGAGGATTTTGATGATAGGGAAAGAACATTATGCTGCGGAACGAGTATGAGGGTCAAAATTCACATCAACATAAGGAAACCTTTGAGAATAAGGATTAAGTTGAATTTGGAGGGTCCAATGGGTGGTGTTCTTATCCCAATTAAGGATGAACAATTACCTGATTTCTGTTCCCACTGTGGTGTTATTGGTCACCATTTTAAAGACTGTAATTTCTTCTCTAAGAATGCTAGCCCAAATACAAATTTTCACCAATATGGCCAAAGCCTAAGATTTAATGGCAGGTATTCGTCCATTGCTCGATCCCCACCAGATACACATCGAAGTCGCAGGAACAGGCCTCAAAATAATCCAAGGTGTGAAGGGGAGGTGTCGATGGAAGGGGCTTCTACTGAGAATCAGACGCAAATGCAAGTTGATGGGAGTAAAGGGGAAGATGATGTACCTGGTTCGGCCGATAAGGGGGAAGGCGGTGTGTCACCGGAGATTGTTCGTTTCTCGTCTCCGATAAGCATTGATGGTGCAATAAATCCATCAGCTCAGGCTTCAGACTGTTCTATGAAGGAGCAATCTTCGGAATTGAAAGCGCCCGCTATTCTCGGAGTAAATGTCGCTACGGTTGAAGGGCAAAAACGAAACGGTTGCGTGCGGAAGCTCAGTTTTGGGGAAGATGAAGGCTCTCCGATTGATCTGCCCTAA

mRNA sequence

ATGGACCAGGATGATTTGATCGCGGATTGGGGCAAATTGAATCTAACTACAGAAGAGGAAGAGGTCTCTGTTGATGTACGAGTTGGAACCGGACAGACTACGGATTTGCTCTTTGAAGGCTGTATGGTTGGGAAGCTCTTATCCCCGAGGATTGTTTCAGCAGAGGTAATCCGAAAAACTTTTAAAGCAGCTTGGAAGATTGAGAATGGATTAGAAGTTGAAGTGATAGGGAAAAACCAATTCATCTTTCGATTTCCTAGTGAATTAGATCGAATCAGAGTTGTTCGCAATGGCCCCTGGCTGTTTGATAGGTTTTTGCTAGTCTTGGTAAAACCACAACCTTTTGTTAAACCATCTGAGATGCAATTTGATTATGTGGCTTTCTGGGTTCACTTTCTTGACATTCCATTAAACTGTTATAACAAAGAGATGGTCGAGAGTTTGGGCAATGCAATGGGGATGTTTGAGGATTTTGATGATAGGGAAAGAACATTATGCTGCGGAACGAGTATGAGGGTCAAAATTCACATCAACATAAGGAAACCTTTGAGAATAAGGATTAAGTTGAATTTGGAGGGTCCAATGGGTGGTGTTCTTATCCCAATTAAGGATGAACAATTACCTGATTTCTGTTCCCACTGTGGTGTTATTGGTCACCATTTTAAAGACTGTAATTTCTTCTCTAAGAATGCTAGCCCAAATACAAATTTTCACCAATATGGCCAAAGCCTAAGATTTAATGGCAGGTATTCGTCCATTGCTCGATCCCCACCAGATACACATCGAAGTCGCAGGAACAGGCCTCAAAATAATCCAAGGTGTGAAGGGGAGGTGTCGATGGAAGGGGCTTCTACTGAGAATCAGACGCAAATGCAAGTTGATGGGAGTAAAGGGGAAGATGATGTACCTGGTTCGGCCGATAAGGGGGAAGGCGGTGTGTCACCGGAGATTGTTCGTTTCTCGTCTCCGATAAGCATTGATGGTGCAATAAATCCATCAGCTCAGGCTTCAGACTGTTCTATGAAGGAGCAATCTTCGGAATTGAAAGCGCCCGCTATTCTCGGAGTAAATGTCGCTACGGTTGAAGGGCAAAAACGAAACGGTTGCGTGCGGAAGCTCAGTTTTGGGGAAGATGAAGGCTCTCCGATTGATCTGCCCTAA

Coding sequence (CDS)

ATGGACCAGGATGATTTGATCGCGGATTGGGGCAAATTGAATCTAACTACAGAAGAGGAAGAGGTCTCTGTTGATGTACGAGTTGGAACCGGACAGACTACGGATTTGCTCTTTGAAGGCTGTATGGTTGGGAAGCTCTTATCCCCGAGGATTGTTTCAGCAGAGGTAATCCGAAAAACTTTTAAAGCAGCTTGGAAGATTGAGAATGGATTAGAAGTTGAAGTGATAGGGAAAAACCAATTCATCTTTCGATTTCCTAGTGAATTAGATCGAATCAGAGTTGTTCGCAATGGCCCCTGGCTGTTTGATAGGTTTTTGCTAGTCTTGGTAAAACCACAACCTTTTGTTAAACCATCTGAGATGCAATTTGATTATGTGGCTTTCTGGGTTCACTTTCTTGACATTCCATTAAACTGTTATAACAAAGAGATGGTCGAGAGTTTGGGCAATGCAATGGGGATGTTTGAGGATTTTGATGATAGGGAAAGAACATTATGCTGCGGAACGAGTATGAGGGTCAAAATTCACATCAACATAAGGAAACCTTTGAGAATAAGGATTAAGTTGAATTTGGAGGGTCCAATGGGTGGTGTTCTTATCCCAATTAAGGATGAACAATTACCTGATTTCTGTTCCCACTGTGGTGTTATTGGTCACCATTTTAAAGACTGTAATTTCTTCTCTAAGAATGCTAGCCCAAATACAAATTTTCACCAATATGGCCAAAGCCTAAGATTTAATGGCAGGTATTCGTCCATTGCTCGATCCCCACCAGATACACATCGAAGTCGCAGGAACAGGCCTCAAAATAATCCAAGGTGTGAAGGGGAGGTGTCGATGGAAGGGGCTTCTACTGAGAATCAGACGCAAATGCAAGTTGATGGGAGTAAAGGGGAAGATGATGTACCTGGTTCGGCCGATAAGGGGGAAGGCGGTGTGTCACCGGAGATTGTTCGTTTCTCGTCTCCGATAAGCATTGATGGTGCAATAAATCCATCAGCTCAGGCTTCAGACTGTTCTATGAAGGAGCAATCTTCGGAATTGAAAGCGCCCGCTATTCTCGGAGTAAATGTCGCTACGGTTGAAGGGCAAAAACGAAACGGTTGCGTGCGGAAGCTCAGTTTTGGGGAAGATGAAGGCTCTCCGATTGATCTGCCCTAA

Protein sequence

MDQDDLIADWGKLNLTTEEEEVSVDVRVGTGQTTDLLFEGCMVGKLLSPRIVSAEVIRKTFKAAWKIENGLEVEVIGKNQFIFRFPSELDRIRVVRNGPWLFDRFLLVLVKPQPFVKPSEMQFDYVAFWVHFLDIPLNCYNKEMVESLGNAMGMFEDFDDRERTLCCGTSMRVKIHINIRKPLRIRIKLNLEGPMGGVLIPIKDEQLPDFCSHCGVIGHHFKDCNFFSKNASPNTNFHQYGQSLRFNGRYSSIARSPPDTHRSRRNRPQNNPRCEGEVSMEGASTENQTQMQVDGSKGEDDVPGSADKGEGGVSPEIVRFSSPISIDGAINPSAQASDCSMKEQSSELKAPAILGVNVATVEGQKRNGCVRKLSFGEDEGSPIDLP

Homology

[Close]

BLAST of Tan0007613 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 228.8 bits (582), Expect = 8.0e-56
Identity = 132/349 (37.82%), Postives = 196/349 (56.16%), Query Frame = 0


Query: 1   MDQDDLIADWGKLNLTTEEEEVSVDVRVGTGQTTDLLFEGCMVGKLLSPRIVSAEVIRKT 60
           MD ++L+ADW K  LT+EE+E+++DV V   +  +      +VGKLL+ RI+SA+V+ + 
Sbjct: 1   MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60

Query: 61  FKAAWKIENGLEVEVIGKNQFIFRFPSELDRIRVVRNGPWLFDRFLLVLVKPQPFVKPSE 120
              AWK+E+ L VE IGKN F+F F  E D  RV++ GPW FD+ L+VL KP      SE
Sbjct: 61  LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120

Query: 121 MQFDYVAFWVHFLDIPLNCYNKEMVESLGNAMGMFEDFDDRERTLCCGTSMRVKIHINIR 180
           ++F+ VAFW+H  D+P++  NK M   LGNA+G F D D  E+    G S+R+++ I+I 
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180

Query: 181 KPLRIRIKLNLEGPMGGVLIPIKDEQLPDFCSHCGVIGHHFKDCNFFSKNASPNTN-FHQ 240
           KPLR  IK+N++GPMGG  IPI+ E+LPDFC  CGVIGH   DC+     A  ++    +
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSE 240

Query: 241 YGQSLRFNGRYSSIARSPPDTHRSRRNRPQNNPRCEGEVSMEGASTENQTQMQVDGSKGE 300
           YG  LRF G  +   +       +R +   ++     E  +E    +   Q   DG + +
Sbjct: 241 YGPWLRFVGSKAGAQKGRKGKSPAREDSCGSSSMNSKERGVEETKQQLSEQTNQDGFQSQ 300

Query: 301 DDVPGSADKGEGGVSPEIVRFSSPISIDGAINPSAQASDCSMKEQSSEL 349
                + D G    +          S D +IN   ++S  S K+  S++
Sbjct: 301 AAAEQTGDAGGRASATGCALGMESNSWDHSINDFPKSSQGSRKKLMSDV 349

[Close]

BLAST of Tan0007613 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])

HSP 1 Score: 212.6 bits (540), Expect = 5.9e-51
Identity = 107/253 (42.29%), Postives = 152/253 (60.08%), Query Frame = 0


Query: 1   MDQDDLIADWGKLNLTTEEEEVSVDVRVGTGQTTDLLFEGCMVGKLLSPRIVSAEVIRKT 60
           M   +L+ +W    LT+EE++++VD+     + T    E  ++ KLLS R +S  V++ T
Sbjct: 1   MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60

Query: 61  FKAAWKIE-NGLEVEVIGKNQFIFRFPSELDRIRVVRNGPWLFDRFLLVLVKPQPFVKPS 120
            K AWK++     V++IG N F+F F    DR R++R GPW FDR L+++  P    KP 
Sbjct: 61  LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120

Query: 121 EMQFDYVAFWVHFLDIPLNCYNKEMVESLGNAMGMFEDFDDRERTLCCGTSMRVKIHINI 180
           +M F  V+ WVHF D+ L C NK M   LGNA+G+FED +      C G+ +RV++  ++
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180

Query: 181 RKPLRIRIKLNLEGPMGGVLIPIKDEQLPDFCSHCGVIGHHFKDCNFFSKNASPNTNFHQ 240
            KPL   IKLNL+GPMGG  IPI+ E+LPDF  HCG + H  KDC+    + S + N  Q
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVD-SVSKNL-Q 240

Query: 241 YGQSLRFNGRYSS 253
           YG  LRF G  +S
Sbjct: 241 YGPWLRFQGHKNS 251

[Close]

BLAST of Tan0007613 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 208.0 bits (528), Expect = 1.5e-49
Identity = 102/245 (41.63%), Postives = 147/245 (60.00%), Query Frame = 0


Query: 5   DLIADWGKLNLTTEEEEVSVDVRVGTGQTTDLLFEGCMVGKLLSPRIVSAEVIRKTFKAA 64
           DL+ +W    LT+EEEE ++DV      TT    E  +VGKL   R ++  V++ T + A
Sbjct: 5   DLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNTMRTA 64

Query: 65  WKIE-NGLEVEVIGKNQFIFRFPSELDRIRVVRNGPWLFDRFLLVLVKPQPFVKPSEMQF 124
           WK+E N  EV+ +G N F+F F   LDR ++ ++GPW FDR L+++ KP   + PSE+ F
Sbjct: 65  WKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPSELDF 124

Query: 125 DYVAFWVHFLDIPLNCYNKEMVESLGNAMGMFEDFDDRERTLCCGTSMRVKIHINIRKPL 184
             +  WV F D+PL C  ++M   LGNA+G FE+ D  +     G+++RV++ ++I KPL
Sbjct: 125 TKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDISKPL 184

Query: 185 RIRIKLNLEGPMGGVLIPIKDEQLPDFCSHCGVIGHHFKDCNFFSKNASPNTNFHQYGQS 244
           R  IKLNL+GP+GG  IPI+ E+LPDFC HCG+               S +   HQYG  
Sbjct: 185 RRGIKLNLDGPIGGAWIPIQYERLPDFCYHCGL---------------SSSRKKHQYGSW 234

Query: 245 LRFNG 249
           LR+ G
Sbjct: 245 LRYQG 234

[Close]

BLAST of Tan0007613 vs. NCBI nr
Match: XP_028124075.1 (uncharacterized protein LOC114321128 [Camellia sinensis])

HSP 1 Score: 162.5 bits (410), Expect = 7.1e-36
Identity = 104/316 (32.91%), Postives = 170/316 (53.80%), Query Frame = 0


Query: 4   DDLIADWGKLNLTTEEEEVSVDVRVGTGQTTDLLF---EGCMVGKLLSPRIVSAEVIRKT 63
           D L+     L+LT+EE+ V   VR+G G +T L+    + C+VGKLL+ R  + E ++ T
Sbjct: 3   DSLVDLTRTLSLTSEEDAV---VRIG-GDSTSLMMGKSDMCLVGKLLTRRPFNVEAMKNT 62

Query: 64  FKAAWKIENGLEVEVIGKNQFIFRFPSELDRIRVVRNGPWLFDRFLLVLVKPQPFVKPSE 123
             + W+   G++V VIG N F+F F   +D+ RV+ NGPW FD+ LL+L +  P V+PS+
Sbjct: 63  LLSVWQPTKGMQVRVIGDNLFVFVFGHVVDKRRVLSNGPWTFDKHLLMLGEMDPNVQPSD 122

Query: 124 MQFDYVAFWVHFLDIPLNCYNKEMVESLGNAMGMFEDFDDRERTLCCGTSMRVKIHINIR 183
           +Q   V FWVH  ++PL   NK++ + +GNA+G F D D  +  +  G +MR+++ I++R
Sbjct: 123 IQLTGVQFWVHVCNLPLVLMNKQVGQIVGNAVGQFIDMDYEDGGIAWGRTMRIRVAIDVR 182

Query: 184 KPLRIRIKLNLEGPMGGVLIPIKDEQLPDFCSHCGVIGHHFKDC-NFFSKNASPNTNFHQ 243
           KPLR  +KL L      + +  K E+LP +C  CG +GH  ++C +  S       +  Q
Sbjct: 183 KPLRRGMKLALSS-ADPIWVDFKYERLPIYCYFCGRLGHSDRECDDKLSFADGTRVDSLQ 242

Query: 244 YGQSLRFNG-------RYSSIARSPPDTHRSRRNRPQ--NNPRCEGEVSMEGASTENQTQ 303
           YG  LR +        R  SI +    TH   +  P   N+ +   E      ++  +  
Sbjct: 243 YGAWLRMDNIKSKGSRRAGSIDKGVGGTHPGGQGIPMRTNHAQMNQEEGAPLRASPTRAP 302

Query: 304 MQVDGSKGEDDVPGSA 307
           ++ D  +   ++ G +
Sbjct: 303 VEADRRRDRKEISGQS 313

[Close]

BLAST of Tan0007613 vs. NCBI nr
Match: XP_028122006.1 (uncharacterized protein LOC114319195 [Camellia sinensis])

HSP 1 Score: 161.4 bits (407), Expect = 1.6e-35
Identity = 102/308 (33.12%), Postives = 165/308 (53.57%), Query Frame = 0


Query: 4   DDLIADWGKLNLTTEEEEVSVDVRVGTGQTTDLLF---EGCMVGKLLSPRIVSAEVIRKT 63
           D L+     L+LT+EE+ V   VR+G G++T L+    + C+VGKLL+ R  + E ++ T
Sbjct: 3   DSLLDLTRTLSLTSEEDAV---VRIG-GESTSLMMGKSDMCLVGKLLTRRPFNVEAMKNT 62

Query: 64  FKAAWKIENGLEVEVIGKNQFIFRFPSELDRIRVVRNGPWLFDRFLLVLVKPQPFVKPSE 123
             + W+   G++V VIG N F+F F   +D+ RV+ +GPW FD+ LL+L +  P V+PS+
Sbjct: 63  LLSVWQPTKGMQVRVIGDNLFVFVFGHVVDKRRVLSDGPWTFDKHLLMLGEMDPNVQPSD 122

Query: 124 MQFDYVAFWVHFLDIPLNCYNKEMVESLGNAMGMFEDFDDRERTLCCGTSMRVKIHINIR 183
           +Q   V FWVH  ++PL   NK++ E +GNA+G F D D  +  +  G +MR+++ +++R
Sbjct: 123 IQLTRVQFWVHVCNLPLVLMNKKVGEIVGNAVGQFIDMDYEDGGIVWGRTMRIRVALDVR 182

Query: 184 KPLRIRIKLNLEGPMGGVLIPIKDEQLPDFCSHCGVIGHHFKDC-NFFSKNASPNTNFHQ 243
           KPLR  +KL L      + +  K E+LP +C  CG +GH  ++C +  S       +  Q
Sbjct: 183 KPLRRGMKLALSS-AEPIWVDFKYERLPIYCYFCGRLGHSERECDDKLSSADGSRVDSLQ 242

Query: 244 YGQSLRFNG-------RYSSIARSPPDTHRSRRNRPQNNPRCEGEVSMEGASTENQTQMQ 301
           YG  LR +        R  SI +    TH   +  P      +           + T++ 
Sbjct: 243 YGAWLRMDNIKSKGSRRAGSIDKGVGGTHPGGQGIPLRTNHAQVNQEEGAPLRASPTRVP 302

[Close]

BLAST of Tan0007613 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 3.9e-56
Identity = 132/349 (37.82%), Postives = 196/349 (56.16%), Query Frame = 0


Query: 1   MDQDDLIADWGKLNLTTEEEEVSVDVRVGTGQTTDLLFEGCMVGKLLSPRIVSAEVIRKT 60
           MD ++L+ADW K  LT+EE+E+++DV V   +  +      +VGKLL+ RI+SA+V+ + 
Sbjct: 1   MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60

Query: 61  FKAAWKIENGLEVEVIGKNQFIFRFPSELDRIRVVRNGPWLFDRFLLVLVKPQPFVKPSE 120
              AWK+E+ L VE IGKN F+F F  E D  RV++ GPW FD+ L+VL KP      SE
Sbjct: 61  LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120

Query: 121 MQFDYVAFWVHFLDIPLNCYNKEMVESLGNAMGMFEDFDDRERTLCCGTSMRVKIHINIR 180
           ++F+ VAFW+H  D+P++  NK M   LGNA+G F D D  E+    G S+R+++ I+I 
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180

Query: 181 KPLRIRIKLNLEGPMGGVLIPIKDEQLPDFCSHCGVIGHHFKDCNFFSKNASPNTN-FHQ 240
           KPLR  IK+N++GPMGG  IPI+ E+LPDFC  CGVIGH   DC+     A  ++    +
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSE 240

Query: 241 YGQSLRFNGRYSSIARSPPDTHRSRRNRPQNNPRCEGEVSMEGASTENQTQMQVDGSKGE 300
           YG  LRF G  +   +       +R +   ++     E  +E    +   Q   DG + +
Sbjct: 241 YGPWLRFVGSKAGAQKGRKGKSPAREDSCGSSSMNSKERGVEETKQQLSEQTNQDGFQSQ 300

Query: 301 DDVPGSADKGEGGVSPEIVRFSSPISIDGAINPSAQASDCSMKEQSSEL 349
                + D G    +          S D +IN   ++S  S K+  S++
Sbjct: 301 AAAEQTGDAGGRASATGCALGMESNSWDHSINDFPKSSQGSRKKLMSDV 349

[Close]

BLAST of Tan0007613 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 2.9e-51
Identity = 107/253 (42.29%), Postives = 152/253 (60.08%), Query Frame = 0


Query: 1   MDQDDLIADWGKLNLTTEEEEVSVDVRVGTGQTTDLLFEGCMVGKLLSPRIVSAEVIRKT 60
           M   +L+ +W    LT+EE++++VD+     + T    E  ++ KLLS R +S  V++ T
Sbjct: 1   MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60

Query: 61  FKAAWKIE-NGLEVEVIGKNQFIFRFPSELDRIRVVRNGPWLFDRFLLVLVKPQPFVKPS 120
            K AWK++     V++IG N F+F F    DR R++R GPW FDR L+++  P    KP 
Sbjct: 61  LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120

Query: 121 EMQFDYVAFWVHFLDIPLNCYNKEMVESLGNAMGMFEDFDDRERTLCCGTSMRVKIHINI 180
           +M F  V+ WVHF D+ L C NK M   LGNA+G+FED +      C G+ +RV++  ++
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180

Query: 181 RKPLRIRIKLNLEGPMGGVLIPIKDEQLPDFCSHCGVIGHHFKDCNFFSKNASPNTNFHQ 240
            KPL   IKLNL+GPMGG  IPI+ E+LPDF  HCG + H  KDC+    + S + N  Q
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVD-SVSKNL-Q 240

Query: 241 YGQSLRFNGRYSS 253
           YG  LRF G  +S
Sbjct: 241 YGPWLRFQGHKNS 251

[Close]

BLAST of Tan0007613 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 7.1e-50
Identity = 102/245 (41.63%), Postives = 147/245 (60.00%), Query Frame = 0


Query: 5   DLIADWGKLNLTTEEEEVSVDVRVGTGQTTDLLFEGCMVGKLLSPRIVSAEVIRKTFKAA 64
           DL+ +W    LT+EEEE ++DV      TT    E  +VGKL   R ++  V++ T + A
Sbjct: 5   DLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNTMRTA 64

Query: 65  WKIE-NGLEVEVIGKNQFIFRFPSELDRIRVVRNGPWLFDRFLLVLVKPQPFVKPSEMQF 124
           WK+E N  EV+ +G N F+F F   LDR ++ ++GPW FDR L+++ KP   + PSE+ F
Sbjct: 65  WKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPSELDF 124

Query: 125 DYVAFWVHFLDIPLNCYNKEMVESLGNAMGMFEDFDDRERTLCCGTSMRVKIHINIRKPL 184
             +  WV F D+PL C  ++M   LGNA+G FE+ D  +     G+++RV++ ++I KPL
Sbjct: 125 TKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDISKPL 184

Query: 185 RIRIKLNLEGPMGGVLIPIKDEQLPDFCSHCGVIGHHFKDCNFFSKNASPNTNFHQYGQS 244
           R  IKLNL+GP+GG  IPI+ E+LPDFC HCG+               S +   HQYG  
Sbjct: 185 RRGIKLNLDGPIGGAWIPIQYERLPDFCYHCGL---------------SSSRKKHQYGSW 234

Query: 245 LRFNG 249
           LR+ G
Sbjct: 245 LRYQG 234

[Close]

BLAST of Tan0007613 vs. ExPASy TrEMBL
Match: A0A5C7HLA0 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_015394 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 3.5e-33
Identity = 83/234 (35.47%), Postives = 127/234 (54.27%), Query Frame = 0


Query: 13  LNLTTEEEEVSV-DVRVGTGQTTDLLFEGCMVGKLLSPRIVSAEVIRKTFKAAWKIENGL 72
           L+L  +E+E  V  +  G  +   L    C+ GK LSP +V+ E  R      WK+  G+
Sbjct: 13  LSLKDKEKEGPVHTLHGGLKENGALKMALCLAGKFLSPDMVNREAFRSVILRIWKLMEGV 72

Query: 73  EVEVIGKNQFIFRFPSELDRIRVVRNGPWLFDRFLLVLVKPQPFVKPSEMQFDYVAFWVH 132
           EVEV+    F F F  + DR +V+  GPW FD  L+VL +P        ++FD V FWVH
Sbjct: 73  EVEVVTSIVFAFHFQLDEDRRKVLAGGPWSFDDALIVLEEPTGKGAIRGLKFDVVEFWVH 132

Query: 133 FLDIPLNCYNKEMVESLGNAMGMFEDFDDRERTLCCGTSMRVKIHINIRKPLRIRIKLNL 192
             ++PL C  KE+ + LG  +G   + D      C G  +RV++ I+I KPLR  +++++
Sbjct: 133 ISNLPLLCMTKEIAKFLGGIIGEVREIDTGPIGDCLGKFLRVRVAIDIGKPLRRFLRVDV 192

Query: 193 EGPMGGVLIPIKDEQLPDFCSHCGVIGHHFKDCNFFSKNASPNTNFHQYGQSLR 246
            G     ++PI+ E+LP+FC +CG++GH  + C    K  +   +  QYG  LR
Sbjct: 193 LGDGEETVMPIQHERLPNFCFYCGMLGHVVRGCPEICKQENVVVSDFQYGSWLR 246

[Close]

BLAST of Tan0007613 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 7.9e-33
Identity = 85/243 (34.98%), Postives = 131/243 (53.91%), Query Frame = 0


Query: 4   DDLIADWGKLNLTTEEEEVSVDVRVGTGQTTDLLFEGCMVGKLLSPRIVSAEVIRKTFKA 63
           D++   W     T +E E +V +  G    T    + C+V KL + + +SAE IR   K+
Sbjct: 2   DEITDLWEHFKSTNDENE-TVTIDRGKPILTADNVKLCVVAKLHTSKRISAEAIRSVMKS 61

Query: 64  AWKIENGLEVEVIGKNQFIFRFPSELDRIRVVRNGPWLFDRFLLVLVKPQPFVKPSEMQF 123
            W++ N    E +G N ++  F S  ++ RV+ +GPW F++ LLVL  P    +P +M F
Sbjct: 62  VWRVHNSTRFEPLGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLDMNF 121

Query: 124 DYVAFWVHFLDIPLNCYNKEMVESLGNAMGMFEDFDDRERTLCCGTSMRVKIHINIRKPL 183
           ++ AFW+   +IP  C + EM   LG  +G  E+ +        G  +RV++ I++ KPL
Sbjct: 122 NFCAFWIQIHNIPFECISTEMANILGAKLGDVEEIEGDGADGWAGPFIRVRVKIDVSKPL 181

Query: 184 RIRIKL-NLEGPMGGVLIPIKDEQLPDFCSHCGVIGHHFKDCNFFSKNASPNTNFHQYGQ 243
           R  IKL N +G    +  P++ E+LPDFC  CG IGH  ++C   SK  + N+   QYG 
Sbjct: 182 RRGIKLKNSDGK--DIWCPLRYEKLPDFCYECGKIGHSGRECEQRSKVVTTNSP-EQYGD 240

Query: 244 SLR 246
            LR
Sbjct: 242 WLR 240

[Close]

BLAST of Tan0007613 vs. TAIR 10
Match: AT5G36228.1 (nucleic acid binding;zinc ion binding )

HSP 1 Score: 82.4 bits (202), Expect = 8.6e-16
Identity = 51/214 (23.83%), Postives = 96/214 (44.86%), Query Frame = 0


Query: 13  LNLTTEEEEVSVDVRVGTGQTTDLLFEGCMVGKLLSPRIVSAEVIRKTFKAAWKIENGLE 72
           ++L  EE E+ +      G          ++G++L+P+  S E         W +   + 
Sbjct: 12  MDLGREEPELYIPYHAYVGALASNRLS--LLGRILNPQTQSVERAILELPYQWGLGTQVH 71

Query: 73  VEVIGKNQFIFRFPSELDRIRVVRNGPWLFDRFLLVLVKPQPFVKPSEMQFDYVAFWVHF 132
             ++    F  RF SE+D +  +R  PW+F+ + + L + + F  P+E    ++  WVH 
Sbjct: 72  GRILDDRCFQVRFRSEIDLLNGLRRAPWVFNEWFIALQRWEDF--PTEDFLTFIDVWVHI 131

Query: 133 LDIPLNCYNKEMVESLGNAMGMFEDFDDRERTLCCGTSMRVKIHINIRKPLRIRIKLNLE 192
             IPL   ++  VE + + +G     D  E T    T +RVK+ ++  +PLR   ++   
Sbjct: 132 RGIPLPYVSERTVEIIASTLGEVVAMDFNEETTSQITFIRVKVRMDFTEPLRFFRRVRF- 191

Query: 193 GPMGGVLIPIKDEQLPDFCSHCGVIGHHFKDCNF 227
                 +I  + E+L   C++C  + H    C +
Sbjct: 192 ASRERAMIGFEYEKLQRVCTNCCRVNHQVSHCPY 220

[Close]

BLAST of Tan0007613 vs. TAIR 10
Match: AT3G31430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18636.1); Has 295 Blast hits to 291 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 81.6 bits (200), Expect = 1.5e-15
Identity = 49/183 (26.78%), Postives = 82/183 (44.81%), Query Frame = 0


Query: 42  MVGKLLSPRIVSAEVIRKTFKAAWKIENGLEVEVIGKNQFIFRFPSELDRIRVVRNGPWL 101
           + G+ + PR  +   I  +    W     +   ++   QF F F  E     V+R GPW 
Sbjct: 134 LFGRPVMPRRQNLRSIVASMPRIWGQSGLVHGRIMEGRQFHFIFTLEESLETVLRRGPWA 193

Query: 102 FDRFLLVLVKPQPFVKPSEMQFDYVAFWVHFLDIPLNCYNKEMVESLGNAMGMFEDFDDR 161
           F+ ++++L + +P +      F ++ FWV    IP    N+ +VE +G A+G   D D  
Sbjct: 194 FNDWMILLQRWEPQIP----LFPFIPFWVQIRGIPFQFLNRGVVEHIGRALGQVLDTDFN 253

Query: 162 ERTLCCGTSMRVKIHINIRKPLRIRIKLNLEGPMGGVLIPIKDEQLPDFCSHCGVIGHHF 221
              +      RV +H +I  PLR +        +   L+  + E+L  FC  CG++ H F
Sbjct: 254 VEVVARMDFARVLLHWDITHPLRFQRHFQFTAGV-NTLLRFRYERLRGFCEVCGMLTHDF 311

Query: 222 KDC 225
             C
Sbjct: 314 GAC 311

[Close]

BLAST of Tan0007613 vs. TAIR 10
Match: AT2G13450.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02000.1); Has 247 Blast hits to 243 proteins in 13 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 243; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 65.9 bits (159), Expect = 8.4e-11
Identity = 43/183 (23.50%), Postives = 77/183 (42.08%), Query Frame = 0


Query: 42  MVGKLLSPRIVSAEVIRKTFKAAWKIENGLEVEVIGKNQFIFRFPSELDRIRVVRNGPWL 101
           ++ + L+PR  +   +      AW + N +   V+      F F SE+D + V+R  PWL
Sbjct: 39  LIARPLNPRSQNLHAVISALPRAWGLTNRVHGRVLNDTFVQFIFQSEIDLLSVLRREPWL 98

Query: 102 FDRFLLVLVKPQPFVKPSEMQFDYVAFWVHFLDIPLNCYNKEMVESLGNAMGMFEDFDDR 161
           ++ + +   + +  V  +      +  WV    IPL    +E    + + +G     D  
Sbjct: 99  YNNWFVTAQRWE--VNLTFHLLTSIELWVQMRGIPLLYVCEETALEIAHELGEIITLDFH 158

Query: 162 ERTLCCGTSMRVKIHINIRKPLRIRIKLNLEGPMGGVLIPIKDEQLPDFCSHCGVIGHHF 221
           + T      +RV+I   I   LR  +++  +      LI  + E+L   CS C  + HH 
Sbjct: 159 DSTTTQIAYIRVRIRFGITDRLRFFLRIIFDSG-ETALISFQYERLRRICSSCFRMTHHR 218

Query: 222 KDC 225
             C
Sbjct: 219 NSC 218

[Close]

BLAST of Tan0007613 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 54.7 bits (130), Expect = 1.9e-07
Identity = 57/271 (21.03%), Postives = 107/271 (39.48%), Query Frame = 0


Query: 14  NLTTEEEEVSVDVRVGTGQTTDLLFEGCMVGKLLSPRIVSAEVIRKTFKAAW--KIENGL 73
           NL  + +E+++ V+    +  +LL E C             E +RK   A+   +    +
Sbjct: 4   NLQRQMQEIALGVQ---EEAINLLIELC------------DEALRKPNLASLQNRCPKNV 63

Query: 74  EVEVIGK----NQFIFRFPSELDRIRVVRNGPWLFDRFLLVLVKPQPFVK-PSEMQFDYV 133
           + EV+G+    ++  F F SE     ++R GPW F+ ++ V+   Q + K  S+ +F  +
Sbjct: 64  DEEVVGRILEIHKIEFLFQSEESMFSILRRGPWSFNDWMCVI---QRWTKLHSDAEFKRI 123

Query: 134 AFWVHFLDIPLNCYNKEMVESLGNAMGMFEDFDDRERTLCCGTSMRVKIHINIRKPLRIR 193
            FW+    IPL      ++ S+G  MG+F                   +  N+ + + + 
Sbjct: 124 PFWIQIRGIPLRFLTARIITSIGERMGLF-------------------LETNLGRDVSV- 183

Query: 194 IKLNLEGPMGGVLIPIKDEQLPDFCSHCGVIGHHFKDCNFFSKNASPNTNFHQYGQSLRF 253
                        +  + E+L +FC+ CG++ H   +C   S N  P+ +          
Sbjct: 184 -------------LKFQYEKLKNFCTTCGMLSHDASECP-TSGNQGPHADDDDDDDDNDA 222

Query: 254 NGRYSSIARSPPDTHRSRRNRPQNNPRCEGE 278
           N  +  +    PD      N+       E E
Sbjct: 244 NEDHPDVPGDNPDQVHGPMNQQHPEESTEDE 222

The following BLAST results are available for this feature:

BLAST of Tan0007613 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0007613 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156185.1	8.0e-56	37.82	uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha...	[more]
XP_022132681.1	5.9e-51	42.29	uncharacterized protein LOC111005481 [Momordica charantia]	[more]
XP_022158377.1	1.5e-49	41.63	uncharacterized protein LOC111024874 [Momordica charantia]	[more]
XP_028124075.1	7.1e-36	32.91	uncharacterized protein LOC114321128 [Camellia sinensis]	[more]
XP_028122006.1	1.6e-35	33.12	uncharacterized protein LOC114319195 [Camellia sinensis]	[more]

BLAST of Tan0007613 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DU55	3.9e-56	37.82	uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1BSZ1	2.9e-51	42.29	uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A6J1DX30	7.1e-50	41.63	uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A5C7HLA0	3.5e-33	35.47	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01539...	[more]
A0A6J1D765	7.9e-33	34.98	uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]

BLAST of Tan0007613 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G36228.1	8.6e-16	23.83	nucleic acid binding;zinc ion binding	[more]
AT3G31430.1	1.5e-15	26.78	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G13450.1	8.4e-11	23.50	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G42140.1	1.9e-07	21.03	zinc ion binding;nucleic acid binding	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025836	Zinc knuckle CX2CX4HX4C	PFAM	PF14392	zf-CCHC_4	coord: 178..225 e-value: 1.2E-8 score: 34.5
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 37..175 e-value: 4.8E-27 score: 94.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..316
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 329..351
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 281..295
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 367..386
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 329..344
None	No IPR available	PANTHER	PTHR31286:SF84	SUBFAMILY NOT NAMED	coord: 12..277
IPR040256	Uncharacterized protein At4g02000-like	PANTHER	PTHR31286	GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKE	coord: 12..277

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0007613.1	Tan0007613.1	mRNA