Tan0007597 (gene) Snake gourd v1

Overview


Name	Tan0007597
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Unknown protein
Location	LG10: 4525479 .. 4526973 (-)
RNA-Seq Expression	Tan0007597
Synteny	Tan0007597

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTCGGCATCGGCATTTAAATGATCGCGTGGCAACAGAAACGTTCGACTGGCGGCGCGGTGCTCGCAGCGAAACGCCGCTTCCCGCTTCTACCGCGCCTCTAGTGGTCTACGAGCAGAGCAGCCGTCGCTCGTCGCTCCGTGCTTTCGCTGTCGATTCCGTCCTCTGTATGCTCGGCACGAACCCCGTGTCGGCCATGCTCTCCACACGGTCGGTTTGACCACACCGCTTATCTTACCAGACGCGCCATAAGTGGCGACGCGGCGATCTCACGCGCTTTCGACGCTCGGCGCTCGGGCCTGGCTCCGAAATCACCGACCGAACCCCGACCACCGAACGCCCCGCCGGTTTCTCCGCGATGCCTCTCTGTCTGCAACCTGCATCATCGACAGTCTTGCGTTTGCTTCCCGAACTAATTCCTTCTCGACTCACCACCACGCACGACCCCCGAAGTCTCTAGTACCAGCGACGCTCTACACACGCGCCATCCAAAATGAAAGCAACAACATACAGAATCAATATAACGCGACAAAGATAAGACGAAAGGCATTAACTCTTTTTTAACAGCGAACTAACTTACTTAAGTAAAAACCCGAGACCCGCGAGTTTCGCATGTATGAAAGACTAAACACCTCACATGGCCAAGGATCTAAACTGGCTCGATATACAACCGCGTCACCGCGTAACGCCTCTAATTTTACCTGAACCACAAGCAAATTTCATGGGTTCACCGTACTAATCTAGCTAAGATAATCGGCGCGAGCTGCGAAATTACAAATTCCACTCAAGCAGACTTTAAGCTTCAGACTCACAGTACCACACCACCACCTACACAAAAAAGTTGGGCTTCCCTCTGGAGTTATCAGAGAACTCAGCAAGAGAGAACGTGTATACACGAGAAAGGACATGGTTTAATCCATGTAACGTGCTTTAACAAAGTACGCAATACAATCTAAGTTCGATCATAGCGTGGTGATAATACAACGCAACGCATTGATAAAAAAGCAGAATTCTATGCCTACTAAGTTCACATAAATCTTCCAGCTTCAGAGTCAGTGCTTGGTGGTGTCAATCCTGTTGGCCCTACCGTGATAAAAAAGAGAGAAGGAAAGTATAAAATACTGAGTGCCTAACGGCAGTATAGCATGCCTAACATTTAGACACGCACTACACCTTGGGAGTAAAGACAGATCTCCGACCCTCTTCACTACTGACCCTGCATTCCCGCGCGTTGCCTAGTTAAGAAGACGTCGTCGACGAGTGTCAACTGCAGCGGACCCATCCGACCTCCTCGACTTCGCCGACGCGACCGTCAGATCCGAAGGTCACGCAACCGACGGCCTATGCGTGACGCTGGGGCGCTCACCCCACCCGACAAAGCATGGCATTACCCTCTGGCACATTGGCTGACGGCGGGACTCTATCAACTCCTCCCTGACTTCACTGGCGGGACCGGGCCGGTGAAAGTATCTCGAAGCGCACGGCTGAGATGA

mRNA sequence

ATGCTTCGGCATCGGCATTTAAATGATCGCGTGGCAACAGAAACGTTCGACTGGCGGCGCGGTGCTCGCAGCGAAACGCCGCTTCCCGCTTCTACCGCGCCTCTAGTGGTCTACGAGCAGAGCAGCCGTCGCTCGTCGCTCCGTGCTTTCGCTGTCGATTCCGTCCTCTGTATGCTCGGCACGAACCCCGTGTCGGCCATGCTCTCCACACGCGGACCCATCCGACCTCCTCGACTTCGCCGACGCGACCGTCAGATCCGAAGGTCACGCAACCGACGGCCTATGCGTGACGCTGGGGCGCTCACCCCACCCGACAAAGCATGGCATTACCCTCTGGCACATTGGCTGACGGCGGGACTCTATCAACTCCTCCCTGACTTCACTGGCGGGACCGGGCCGGTGAAAGTATCTCGAAGCGCACGGCTGAGATGA

Coding sequence (CDS)

ATGCTTCGGCATCGGCATTTAAATGATCGCGTGGCAACAGAAACGTTCGACTGGCGGCGCGGTGCTCGCAGCGAAACGCCGCTTCCCGCTTCTACCGCGCCTCTAGTGGTCTACGAGCAGAGCAGCCGTCGCTCGTCGCTCCGTGCTTTCGCTGTCGATTCCGTCCTCTGTATGCTCGGCACGAACCCCGTGTCGGCCATGCTCTCCACACGCGGACCCATCCGACCTCCTCGACTTCGCCGACGCGACCGTCAGATCCGAAGGTCACGCAACCGACGGCCTATGCGTGACGCTGGGGCGCTCACCCCACCCGACAAAGCATGGCATTACCCTCTGGCACATTGGCTGACGGCGGGACTCTATCAACTCCTCCCTGACTTCACTGGCGGGACCGGGCCGGTGAAAGTATCTCGAAGCGCACGGCTGAGATGA

Protein sequence

MLRHRHLNDRVATETFDWRRGARSETPLPASTAPLVVYEQSSRRSSLRAFAVDSVLCMLGTNPVSAMLSTRGPIRPPRLRRRDRQIRRSRNRRPMRDAGALTPPDKAWHYPLAHWLTAGLYQLLPDFTGGTGPVKVSRSARLR

Homology

The following BLAST results are available for this feature:

BLAST of Tan0007597 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0007597 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0007597 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0007597 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0007597.1	Tan0007597.1	mRNA