Tan0007565 (gene) Snake gourd v1

Overview


Name	Tan0007565
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	ATP synthase delta chain, chloroplastic-like
Location	LG10: 1174754 .. 1176053 (+)
RNA-Seq Expression	Tan0007565
Synteny	Tan0007565

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAGTCTTCCCTTGGTAGATCAATGAAAAGAAAAAAGGTTGCAGAGTTTGAGACGAAAAAAAAAACCCGTAAAGACAACGATGATCGATGAAGAAGAAGAAAGAAAGAAGATAAGATTGCAGACCTAACTATCAATTCACCGTCAAAAAATCAACCCCAATTTTCGAATTCATCGAAACATCCAATGGTTCGGTTTGTCTTTTCGAAATTCCATTCCCAAAATCAATGGCTCGGAATCCCTTCCTTATCTCCATGGCGATTAAGCTCCACATAAACCCTAGCCCTAACTCTTCCTCTTCCGGTTAACCCTAGTTCTTTCTCTCTATCTCTGTTCGTTTTCCATGGATACTTTAACTACCTCTGTTTCAACCCTCAGAGTTCCATCAACTGTAACTTCATCTCGCGAGTTTCTTCACCTCAAGAATCACACTGCTCATCTTCCTCATCGCTCCCCTTCTCGCAGATCCAACTCAATCTCAAAACCCCCAGGTTTTCTCTCTACGCACAAAACCCTAAATCCGCTCCCATTTCCCCCTTCCTCCTCCGCCTCCCCACGCCGGTCCTCTTCGCCGGTTCTCCACCGCCGTCCCGCCGCTGGATACGCCGCGGCACTCATCGACGCATCGCAATCCACCGGATCGATTCACTCGGTGGCGAAGGACGTCGGGAGATTCTCGAAGCTGCTGAGAACGAAACGAATCGGAGAGATTTTGAACGATCCGTGCGTAGGGGAGGAGGAGAAAGGGCGATTGGTGAGGGAAATTGTAGGGAAGGGAGGGTTTGAGAAGCAGATGGTGAAGTTGACGAAGATGTTGATTGAGAAGAAGAGGTTGGGGATTTTGAAAGAGGTGTTGAGCGAATTCGAGAGGATTTATGATGAACTTTGTGGAACGGAAGTGGTCTTGGTTTCTTCGAGTAGGAAGATGGAAGAAGAGGAATTGTTTGGGATTGCGAAGAATGTGCAGAGGCTTTGTGGGGCTGTGAAAGTGAAGGTTAGAAGCTTCATTCATGGCGGATTAATGGTGTAGATGATGAAGTTTTCTGGCTGTGAAGATTGTAATTCATGAACAATTGCAAAAGCTTTCAGAAAGTTGTGTTGTTGAACTTGAAACTCTCATTCTCGACCATTTCTTTCGAATACAGACATAGTAGAGGAAAAAATTTAAAGTTTTTAGACTTAATCATTAAAATCACACTTTAAGAGGAAAAAAAAATTGTTGAAATCCAATTTTGGAAAGCAAGGATTGGTTCAATTATCATTTTGATTATTATTATTATTATTATTATTATTAACATGAG

mRNA sequence

CAAAGTCTTCCCTTGGTAGATCAATGAAAAGAAAAAAGGTTGCAGAGTTTGAGACGAAAAAAAAAACCCGTAAAGACAACGATGATCGATGAAGAAGAAGAAAGAAAGAAGATAAGATTGCAGACCTAACTATCAATTCACCGTCAAAAAATCAACCCCAATTTTCGAATTCATCGAAACATCCAATGGTTCGGTTTGTCTTTTCGAAATTCCATTCCCAAAATCAATGGCTCGGAATCCCTTCCTTATCTCCATGGCGATTAAGCTCCACATAAACCCTAGCCCTAACTCTTCCTCTTCCGGTTAACCCTAGTTCTTTCTCTCTATCTCTGTTCGTTTTCCATGGATACTTTAACTACCTCTGTTTCAACCCTCAGAGTTCCATCAACTGTAACTTCATCTCGCGAGTTTCTTCACCTCAAGAATCACACTGCTCATCTTCCTCATCGCTCCCCTTCTCGCAGATCCAACTCAATCTCAAAACCCCCAGGTTTTCTCTCTACGCACAAAACCCTAAATCCGCTCCCATTTCCCCCTTCCTCCTCCGCCTCCCCACGCCGGTCCTCTTCGCCGGTTCTCCACCGCCGTCCCGCCGCTGGATACGCCGCGGCACTCATCGACGCATCGCAATCCACCGGATCGATTCACTCGGTGGCGAAGGACGTCGGGAGATTCTCGAAGCTGCTGAGAACGAAACGAATCGGAGAGATTTTGAACGATCCGTGCGTAGGGGAGGAGGAGAAAGGGCGATTGGTGAGGGAAATTGTAGGGAAGGGAGGGTTTGAGAAGCAGATGGTGAAGTTGACGAAGATGTTGATTGAGAAGAAGAGGTTGGGGATTTTGAAAGAGGTGTTGAGCGAATTCGAGAGGATTTATGATGAACTTTGTGGAACGGAAGTGGTCTTGGTTTCTTCGAGTAGGAAGATGGAAGAAGAGGAATTGTTTGGGATTGCGAAGAATGTGCAGAGGCTTTGTGGGGCTGTGAAAGTGAAGGTTAGAAGCTTCATTCATGGCGGATTAATGGTGTAGATGATGAAGTTTTCTGGCTGTGAAGATTGTAATTCATGAACAATTGCAAAAGCTTTCAGAAAGTTGTGTTGTTGAACTTGAAACTCTCATTCTCGACCATTTCTTTCGAATACAGACATAGTAGAGGAAAAAATTTAAAGTTTTTAGACTTAATCATTAAAATCACACTTTAAGAGGAAAAAAAAATTGTTGAAATCCAATTTTGGAAAGCAAGGATTGGTTCAATTATCATTTTGATTATTATTATTATTATTATTATTATTAACATGAG

Coding sequence (CDS)

ATGGATACTTTAACTACCTCTGTTTCAACCCTCAGAGTTCCATCAACTGTAACTTCATCTCGCGAGTTTCTTCACCTCAAGAATCACACTGCTCATCTTCCTCATCGCTCCCCTTCTCGCAGATCCAACTCAATCTCAAAACCCCCAGGTTTTCTCTCTACGCACAAAACCCTAAATCCGCTCCCATTTCCCCCTTCCTCCTCCGCCTCCCCACGCCGGTCCTCTTCGCCGGTTCTCCACCGCCGTCCCGCCGCTGGATACGCCGCGGCACTCATCGACGCATCGCAATCCACCGGATCGATTCACTCGGTGGCGAAGGACGTCGGGAGATTCTCGAAGCTGCTGAGAACGAAACGAATCGGAGAGATTTTGAACGATCCGTGCGTAGGGGAGGAGGAGAAAGGGCGATTGGTGAGGGAAATTGTAGGGAAGGGAGGGTTTGAGAAGCAGATGGTGAAGTTGACGAAGATGTTGATTGAGAAGAAGAGGTTGGGGATTTTGAAAGAGGTGTTGAGCGAATTCGAGAGGATTTATGATGAACTTTGTGGAACGGAAGTGGTCTTGGTTTCTTCGAGTAGGAAGATGGAAGAAGAGGAATTGTTTGGGATTGCGAAGAATGTGCAGAGGCTTTGTGGGGCTGTGAAAGTGAAGGTTAGAAGCTTCATTCATGGCGGATTAATGGTGTAG

Protein sequence

MDTLTTSVSTLRVPSTVTSSREFLHLKNHTAHLPHRSPSRRSNSISKPPGFLSTHKTLNPLPFPPSSSASPRRSSSPVLHRRPAAGYAAALIDASQSTGSIHSVAKDVGRFSKLLRTKRIGEILNDPCVGEEEKGRLVREIVGKGGFEKQMVKLTKMLIEKKRLGILKEVLSEFERIYDELCGTEVVLVSSSRKMEEEELFGIAKNVQRLCGAVKVKVRSFIHGGLMV

Homology

[Close]

BLAST of Tan0007565 vs. ExPASy Swiss-Prot
Match: P32980 (ATP synthase delta chain, chloroplastic OS=Nicotiana tabacum OX=4097 GN=ATPD PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.1e-18
Identity = 49/144 (34.03%), Postives = 83/144 (57.64%), Query Frame = 0


Query: 84  AAGYAAALIDASQSTGSIHSVAKDVGRFSKLLRTKRIGEILNDPCVGEEEKGRLVREIVG 143
           A  YA AL D ++S G++     D+ +  K+   + +      P VGEE+K  LV EIV 
Sbjct: 66  AGSYANALADIAKSNGTLEQTTADLEKIEKISDDEAVFNFFVSPIVGEEKKRELVDEIVS 125

Query: 144 KGGFEKQMVKLTKMLIEKKRLGILKEVLSEFERIYDELCGTEVVLVSSSRKMEEEELFGI 203
               +  +     +L++ KR+ ++KE++ EFE++Y+ L  TE+ +V+S  K+E + L  I
Sbjct: 126 SSSIQPHVANFLNILVDMKRVELIKEIVKEFEKVYNTLTDTELAVVTSVVKLESQHLAQI 185

Query: 204 AKNVQRLCGAVKVKVRSFIHGGLM 228
           AK VQRL G+  V++++ I   L+
Sbjct: 186 AKGVQRLTGSKNVRIKTVIDESLV 209

[Close]

BLAST of Tan0007565 vs. ExPASy Swiss-Prot
Match: Q02758 (ATP synthase delta chain, chloroplastic OS=Pisum sativum OX=3888 GN=ATPD PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.1e-15
Identity = 63/214 (29.44%), Postives = 102/214 (47.66%), Query Frame = 0


Query: 31  AHLPHRSPSRRSNSISKPPGFLSTHKTLNPLPFPPSSSASP-------------RRSSSP 90
           A L H + S  S  I K    L+    LN      S+  SP             RRS+  
Sbjct: 2   ASLQHTTASLHSKHIPKTTNILTRKPILN---LSSSTFYSPKLKLKLKLPLTKTRRSTGG 61

Query: 91  VLHRR----PAAGYAAALIDASQSTGSIHSVAKDVGRFSKLLRTKRIGEILNDPCVGEEE 150
            L  R     A  YAAAL D + S  ++ ++  D  +  +L    ++ +  + P V +  
Sbjct: 62  ALGARMSSLAAGSYAAALADLANSNNTLDAITADFDKIEQLFSDPKVFDYFSSPIVEDST 121

Query: 151 KGRLVREIVGKGGFEKQMVKLTKMLIEKKRLGILKEVLSEFERIYDELCGTEVVLVSSSR 210
           K +L+ E     GF+        +LI+ KR+ ++ +++ EFE +Y+ L  TE+V+V+S  
Sbjct: 122 KRQLIGEFATTSGFQPHTHNFLNVLIDSKRIDMIIDIIKEFEFVYNTLTDTELVVVTSVV 181

Query: 211 KMEEEELFGIAKNVQRLCGAVKVKVRSFIHGGLM 228
           K+E   L  IAK VQ+L GA KV+ ++ +   L+
Sbjct: 182 KLESHHLAQIAKQVQKLTGAKKVRTKTLLDPSLV 212

[Close]

BLAST of Tan0007565 vs. ExPASy Swiss-Prot
Match: P11402 (ATP synthase delta chain, chloroplastic OS=Spinacia oleracea OX=3562 GN=ATPD PE=1 SV=2)

HSP 1 Score: 84.3 bits (207), Expect = 1.9e-15
Identity = 52/182 (28.57%), Postives = 98/182 (53.85%), Query Frame = 0


Query: 51  FLSTHKTLNPLPF----PPSSSASPRRSS-SPVLHRRPAAGYAAALIDASQSTGSIHSVA 110
           F S+  T NPL          +A PR  +    +    A+ YA+AL D +  TG++ +  
Sbjct: 37  FSSSTATFNPLRLKILTASKLTAKPRGGALGTRMVDSTASRYASALADVADVTGTLEATN 96

Query: 111 KDVGRFSKLLRTKRIGEILNDPCVGEEEKGRLVREIVGKGGFEKQMVKLTKMLIEKKRLG 170
            DV +  ++   + +     +P +  + K  ++ EI+   G +        +LI+ +R+ 
Sbjct: 97  SDVEKLIRIFSEEPVYYFFANPVISIDNKRSVLDEIITTSGLQPHTANFINILIDSERIN 156

Query: 171 ILKEVLSEFERIYDELCGTEVVLVSSSRKMEEEELFGIAKNVQRLCGAVKVKVRSFIHGG 228
           ++KE+L+EFE +++++ GTEV +V+S  K+E + L  IAK VQ++ GA  V++++ I   
Sbjct: 157 LVKEILNEFEDVFNKITGTEVAVVTSVVKLENDHLAQIAKGVQKITGAKNVRIKTVIDPS 216

[Close]

BLAST of Tan0007565 vs. ExPASy Swiss-Prot
Match: Q07300 (ATP synthase delta chain, chloroplastic OS=Sorghum bicolor OX=4558 GN=ATPD PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.5e-15
Identity = 50/159 (31.45%), Postives = 86/159 (54.09%), Query Frame = 0


Query: 64  PPSSSASPRRSSSPVLHRRPAA--GYAAALIDASQSTGSIHSVAKDVGRFSKLLRTKRIG 123
           P    A PRR    V  R  AA   YA+AL + +   G++     D+ +  K+   + + 
Sbjct: 43  PSLRLAPPRRRGDLVRPRAEAAADSYASALSEVAVENGTLEQTVSDLEKLQKIFADETVA 102

Query: 124 EILNDPCVGEEEKGRLVREIVGKGGFEKQMVKLTKMLIEKKRLGILKEVLSEFERIYDEL 183
           E  ++P V  EEK  L+ EI      +  +V    ++++  R  IL E++ EFE I++ L
Sbjct: 103 EFFDNPTVPREEKTALIDEIAKSYELQPHVVNFINVVVDNFRATILPEIVVEFENIFNSL 162

Query: 184 CGTEVVLVSSSRKMEEEELFGIAKNVQRLCGAVKVKVRS 221
            GTEV  V+S  ++E ++L  IA++VQ++ GA  V++++
Sbjct: 163 TGTEVATVTSVVQLESQDLAQIAQHVQKMTGAKNVRLKT 201

[Close]

BLAST of Tan0007565 vs. ExPASy Swiss-Prot
Match: Q42687 (ATP synthase delta chain, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=ATPD PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 5.2e-13
Identity = 47/178 (26.40%), Postives = 91/178 (51.12%), Query Frame = 0


Query: 67  SSASPRRSSSPVLHRRPAAG----------------YAAALIDASQSTGSIHSVAKDVGR 126
           S A PR   +  +   P AG                YA AL++ +   G + +V  DV  
Sbjct: 6   SIAGPRAFKASAVRAAPKAGRRTVVVMARKNEVSESYAKALVELADEKGKLEAVHADVDA 65

Query: 127 FSKLLR-TKRIGEILNDPCVGEEEKGRLVREIVGKGGFEKQMVKLTKMLIEKKRLGILKE 186
            + L++   ++  ++ +P V  ++K  ++ +I  + GF++  +    +L+EK RL ++ E
Sbjct: 66  VAGLMKENAKLSALIMNPVVESDKKRAVLAKIAKEAGFQQYTINWLNLLVEKDRLSLVPE 125

Query: 187 VLSEFERIYDELCGTEVVLVSSSRKMEEEELFGIAKNVQRLCGAVKVKVRSFIHGGLM 228
           +   FE +Y ++  T+V  + S+ K+E+E+ F IAK +Q L G+  +K++  I   L+
Sbjct: 126 ICECFEDLYCQMTDTQVATLRSAVKLEQEQQFLIAKKLQELTGSKNIKLKPVIDSSLI 183

[Close]

BLAST of Tan0007565 vs. NCBI nr
Match: XP_022974855.1 (ATP synthase delta chain, chloroplastic-like [Cucurbita maxima] >XP_022974856.1 ATP synthase delta chain, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 379.8 bits (974), Expect = 1.7e-101
Identity = 202/229 (88.21%), Postives = 216/229 (94.32%), Query Frame = 0


Query: 1   MDTLTTSVSTLRVPSTVTSSREFLHLKNHTAHLPHRSPSRRSNSISKPPGFLSTHKTLNP 60
           MDTLT+SVSTLRVPST+ SSR+ LHLKNH+AHLPHRSPSRRSNSISKPP FLSTHKTLNP
Sbjct: 1   MDTLTSSVSTLRVPSTLASSRDLLHLKNHSAHLPHRSPSRRSNSISKPPNFLSTHKTLNP 60

Query: 61  LPFPPS-SSASPRRSSSPVLHRRPAAGYAAALIDASQSTGSIHSVAKDVGRFSKLLRTKR 120
           LPF  S SS+SPRRSSSP+LHRRPAAGYAAAL+DASQ+TGSIHSVAKDVGRFSK+LRTKR
Sbjct: 61  LPFSSSFSSSSPRRSSSPLLHRRPAAGYAAALVDASQTTGSIHSVAKDVGRFSKVLRTKR 120

Query: 121 IGEILNDPCVGEEEKGRLVREIVGKGGFEKQMVKLTKMLIEKKRLGILKEVLSEFERIYD 180
           IG  LNDP VGEEEKGRLVREI  KGGFEKQ+VKLTKMLIEKKRLGIL EVLSEFERIYD
Sbjct: 121 IGGFLNDPFVGEEEKGRLVREIAAKGGFEKQVVKLTKMLIEKKRLGILNEVLSEFERIYD 180

Query: 181 ELCGTEVVLVSSSRKMEEEELFGIAKNVQRLCGAVKVKVRSFIHGGLMV 229
           ELCGTEVVLVSS+RKM+EEELFGIAKNVQRL GA+KVKVRSFI+GGLMV
Sbjct: 181 ELCGTEVVLVSSNRKMQEEELFGIAKNVQRLSGAMKVKVRSFINGGLMV 229

[Close]

BLAST of Tan0007565 vs. NCBI nr
Match: XP_023540771.1 (ATP synthase delta chain, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 376.7 bits (966), Expect = 1.4e-100
Identity = 199/228 (87.28%), Postives = 215/228 (94.30%), Query Frame = 0


Query: 1   MDTLTTSVSTLRVPSTVTSSREFLHLKNHTAHLPHRSPSRRSNSISKPPGFLSTHKTLNP 60
           MDTLT+SVSTLRVPST+ SSR+ +HLKNH+AHLPHRSPSRRSNSISKPP FLSTHKTLNP
Sbjct: 1   MDTLTSSVSTLRVPSTLASSRDLIHLKNHSAHLPHRSPSRRSNSISKPPNFLSTHKTLNP 60

Query: 61  LPFPPS-SSASPRRSSSPVLHRRPAAGYAAALIDASQSTGSIHSVAKDVGRFSKLLRTKR 120
           LPF  S SS+SPRRSSSP+LHRRPAAGYAAAL+DASQ+TGSIHSVAKDVGRFSK+LRTKR
Sbjct: 61  LPFSSSFSSSSPRRSSSPLLHRRPAAGYAAALVDASQTTGSIHSVAKDVGRFSKVLRTKR 120

Query: 121 IGEILNDPCVGEEEKGRLVREIVGKGGFEKQMVKLTKMLIEKKRLGILKEVLSEFERIYD 180
           IG  LNDP VGEEEKGRLVREI  KGGFEKQ+VKLTKMLIEKKRLGIL EVLSEFERIYD
Sbjct: 121 IGGFLNDPFVGEEEKGRLVREIAAKGGFEKQVVKLTKMLIEKKRLGILNEVLSEFERIYD 180

Query: 181 ELCGTEVVLVSSSRKMEEEELFGIAKNVQRLCGAVKVKVRSFIHGGLM 228
           ELCGTEVVLVSS+RKM+EEEL+GIAKNVQRL GA+KVKVRSFI+GGLM
Sbjct: 181 ELCGTEVVLVSSNRKMQEEELYGIAKNVQRLSGAMKVKVRSFINGGLM 228

[Close]

BLAST of Tan0007565 vs. NCBI nr
Match: XP_022975394.1 (ATP synthase delta chain, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 376.3 bits (965), Expect = 1.8e-100
Identity = 199/228 (87.28%), Postives = 213/228 (93.42%), Query Frame = 0


Query: 1   MDTLTTSVSTLRVPSTVTSSREFLHLKNHTAHLPHRSPSRRSNSISKPPGFLSTHKTLNP 60
           MDTLT+SVSTLRVPST+ SSR+ LHLKNH+AHLPHRSPSRRSNSISKPP FLSTHKTLNP
Sbjct: 1   MDTLTSSVSTLRVPSTLASSRDLLHLKNHSAHLPHRSPSRRSNSISKPPNFLSTHKTLNP 60

Query: 61  LPFPPSSSASPRRSSSPVLHRRPAAGYAAALIDASQSTGSIHSVAKDVGRFSKLLRTKRI 120
            PF    S+SPRRSSSP+LHRRPAAGYAAAL+DASQ+TGSIHSVAKDVGRFSK+LRTKRI
Sbjct: 61  FPF----SSSPRRSSSPLLHRRPAAGYAAALVDASQTTGSIHSVAKDVGRFSKVLRTKRI 120

Query: 121 GEILNDPCVGEEEKGRLVREIVGKGGFEKQMVKLTKMLIEKKRLGILKEVLSEFERIYDE 180
           G  LNDP VGEEEKGRLVREI  KGGFEKQ+VKLTKMLIEKKRLGIL EVLSEFERIYDE
Sbjct: 121 GGFLNDPFVGEEEKGRLVREIAAKGGFEKQVVKLTKMLIEKKRLGILNEVLSEFERIYDE 180

Query: 181 LCGTEVVLVSSSRKMEEEELFGIAKNVQRLCGAVKVKVRSFIHGGLMV 229
           LCGTEVVLVSS+RKM+EEELFGIAKNVQRL GA+KVKVRSFI+GGLMV
Sbjct: 181 LCGTEVVLVSSNRKMQEEELFGIAKNVQRLSGAMKVKVRSFINGGLMV 224

[Close]

BLAST of Tan0007565 vs. NCBI nr
Match: XP_022934549.1 (ATP synthase delta chain, chloroplastic-like [Cucurbita moschata] >XP_022934555.1 ATP synthase delta chain, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 374.0 bits (959), Expect = 9.1e-100
Identity = 200/229 (87.34%), Postives = 215/229 (93.89%), Query Frame = 0


Query: 1   MDTLTTSVSTLRVPSTVTSSREFLHLKNHTAHLPHRSPSRRSNSISKPPGFLSTHKTLNP 60
           MDTLT+SVSTLRVPST+ SSR+ LHLKN++AHLPHRSPSRRSNSISKPP FLSTHKTLNP
Sbjct: 1   MDTLTSSVSTLRVPSTLASSRDLLHLKNYSAHLPHRSPSRRSNSISKPPNFLSTHKTLNP 60

Query: 61  LPFPPS-SSASPRRSSSPVLHRRPAAGYAAALIDASQSTGSIHSVAKDVGRFSKLLRTKR 120
           LPF  S SS+SPRRSSSP+LHRRPAAGYAAAL+DASQ+TGSIHSVAKDVGRFSK+LRTKR
Sbjct: 61  LPFSSSFSSSSPRRSSSPLLHRRPAAGYAAALVDASQTTGSIHSVAKDVGRFSKVLRTKR 120

Query: 121 IGEILNDPCVGEEEKGRLVREIVGKGGFEKQMVKLTKMLIEKKRLGILKEVLSEFERIYD 180
           IG  LNDP V EEEKGRLVREI  KGGFEKQ+VKLTKMLIEKKRLGIL EVLSEFERIYD
Sbjct: 121 IGGFLNDPFVVEEEKGRLVREIAAKGGFEKQVVKLTKMLIEKKRLGILNEVLSEFERIYD 180

Query: 181 ELCGTEVVLVSSSRKMEEEELFGIAKNVQRLCGAVKVKVRSFIHGGLMV 229
           ELCGTEVVLVSS+RKM+EEELFGIAKNVQRL GA+KVKVRSFI+GGLMV
Sbjct: 181 ELCGTEVVLVSSNRKMQEEELFGIAKNVQRLSGAMKVKVRSFINGGLMV 229

[Close]

BLAST of Tan0007565 vs. NCBI nr
Match: KAG7028532.1 (ATP synthase delta chain, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 370.2 bits (949), Expect = 1.3e-98
Identity = 197/228 (86.40%), Postives = 213/228 (93.42%), Query Frame = 0


Query: 1   MDTLTTSVSTLRVPSTVTSSREFLHLKNHTAHLPHRSPSRRSNSISKPPGFLSTHKTLNP 60
           MDTLT+SVSTLRVPST+ SSR+ LHLKN++AHLPHRSPSRRSNSISKPP FLSTHKTLNP
Sbjct: 1   MDTLTSSVSTLRVPSTLASSRDLLHLKNYSAHLPHRSPSRRSNSISKPPNFLSTHKTLNP 60

Query: 61  LPFPPS-SSASPRRSSSPVLHRRPAAGYAAALIDASQSTGSIHSVAKDVGRFSKLLRTKR 120
           LPF  S SS+SPRRSSSP LHRRPAAGYAAAL+DASQ+TGSIHSVAKDVGRFSK+LRTKR
Sbjct: 61  LPFSSSFSSSSPRRSSSPSLHRRPAAGYAAALVDASQTTGSIHSVAKDVGRFSKVLRTKR 120

Query: 121 IGEILNDPCVGEEEKGRLVREIVGKGGFEKQMVKLTKMLIEKKRLGILKEVLSEFERIYD 180
           IG  LNDP V EEEKGRLVREI  KGGFEKQ+VKLTKML+EKKRLGIL EVLSEFERIYD
Sbjct: 121 IGGFLNDPFVVEEEKGRLVREIAAKGGFEKQVVKLTKMLVEKKRLGILNEVLSEFERIYD 180

Query: 181 ELCGTEVVLVSSSRKMEEEELFGIAKNVQRLCGAVKVKVRSFIHGGLM 228
           ELCGTEVVLVSS+RKM+E+ELFGIAKNVQRL GA+KVKVRSFI+GGLM
Sbjct: 181 ELCGTEVVLVSSNRKMQEQELFGIAKNVQRLSGAMKVKVRSFINGGLM 228

[Close]

BLAST of Tan0007565 vs. ExPASy TrEMBL
Match: A0A6J1IF16 (ATP synthase delta chain, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111473623 PE=3 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 8.0e-102
Identity = 202/229 (88.21%), Postives = 216/229 (94.32%), Query Frame = 0


Query: 1   MDTLTTSVSTLRVPSTVTSSREFLHLKNHTAHLPHRSPSRRSNSISKPPGFLSTHKTLNP 60
           MDTLT+SVSTLRVPST+ SSR+ LHLKNH+AHLPHRSPSRRSNSISKPP FLSTHKTLNP
Sbjct: 1   MDTLTSSVSTLRVPSTLASSRDLLHLKNHSAHLPHRSPSRRSNSISKPPNFLSTHKTLNP 60

Query: 61  LPFPPS-SSASPRRSSSPVLHRRPAAGYAAALIDASQSTGSIHSVAKDVGRFSKLLRTKR 120
           LPF  S SS+SPRRSSSP+LHRRPAAGYAAAL+DASQ+TGSIHSVAKDVGRFSK+LRTKR
Sbjct: 61  LPFSSSFSSSSPRRSSSPLLHRRPAAGYAAALVDASQTTGSIHSVAKDVGRFSKVLRTKR 120

Query: 121 IGEILNDPCVGEEEKGRLVREIVGKGGFEKQMVKLTKMLIEKKRLGILKEVLSEFERIYD 180
           IG  LNDP VGEEEKGRLVREI  KGGFEKQ+VKLTKMLIEKKRLGIL EVLSEFERIYD
Sbjct: 121 IGGFLNDPFVGEEEKGRLVREIAAKGGFEKQVVKLTKMLIEKKRLGILNEVLSEFERIYD 180

Query: 181 ELCGTEVVLVSSSRKMEEEELFGIAKNVQRLCGAVKVKVRSFIHGGLMV 229
           ELCGTEVVLVSS+RKM+EEELFGIAKNVQRL GA+KVKVRSFI+GGLMV
Sbjct: 181 ELCGTEVVLVSSNRKMQEEELFGIAKNVQRLSGAMKVKVRSFINGGLMV 229

[Close]

BLAST of Tan0007565 vs. ExPASy TrEMBL
Match: A0A6J1IKE3 (ATP synthase delta chain, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111474715 PE=3 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 8.9e-101
Identity = 199/228 (87.28%), Postives = 213/228 (93.42%), Query Frame = 0


Query: 1   MDTLTTSVSTLRVPSTVTSSREFLHLKNHTAHLPHRSPSRRSNSISKPPGFLSTHKTLNP 60
           MDTLT+SVSTLRVPST+ SSR+ LHLKNH+AHLPHRSPSRRSNSISKPP FLSTHKTLNP
Sbjct: 1   MDTLTSSVSTLRVPSTLASSRDLLHLKNHSAHLPHRSPSRRSNSISKPPNFLSTHKTLNP 60

Query: 61  LPFPPSSSASPRRSSSPVLHRRPAAGYAAALIDASQSTGSIHSVAKDVGRFSKLLRTKRI 120
            PF    S+SPRRSSSP+LHRRPAAGYAAAL+DASQ+TGSIHSVAKDVGRFSK+LRTKRI
Sbjct: 61  FPF----SSSPRRSSSPLLHRRPAAGYAAALVDASQTTGSIHSVAKDVGRFSKVLRTKRI 120

Query: 121 GEILNDPCVGEEEKGRLVREIVGKGGFEKQMVKLTKMLIEKKRLGILKEVLSEFERIYDE 180
           G  LNDP VGEEEKGRLVREI  KGGFEKQ+VKLTKMLIEKKRLGIL EVLSEFERIYDE
Sbjct: 121 GGFLNDPFVGEEEKGRLVREIAAKGGFEKQVVKLTKMLIEKKRLGILNEVLSEFERIYDE 180

Query: 181 LCGTEVVLVSSSRKMEEEELFGIAKNVQRLCGAVKVKVRSFIHGGLMV 229
           LCGTEVVLVSS+RKM+EEELFGIAKNVQRL GA+KVKVRSFI+GGLMV
Sbjct: 181 LCGTEVVLVSSNRKMQEEELFGIAKNVQRLSGAMKVKVRSFINGGLMV 224

[Close]

BLAST of Tan0007565 vs. ExPASy TrEMBL
Match: A0A6J1F2X7 (ATP synthase delta chain, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111441689 PE=3 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 4.4e-100
Identity = 200/229 (87.34%), Postives = 215/229 (93.89%), Query Frame = 0


Query: 1   MDTLTTSVSTLRVPSTVTSSREFLHLKNHTAHLPHRSPSRRSNSISKPPGFLSTHKTLNP 60
           MDTLT+SVSTLRVPST+ SSR+ LHLKN++AHLPHRSPSRRSNSISKPP FLSTHKTLNP
Sbjct: 1   MDTLTSSVSTLRVPSTLASSRDLLHLKNYSAHLPHRSPSRRSNSISKPPNFLSTHKTLNP 60

Query: 61  LPFPPS-SSASPRRSSSPVLHRRPAAGYAAALIDASQSTGSIHSVAKDVGRFSKLLRTKR 120
           LPF  S SS+SPRRSSSP+LHRRPAAGYAAAL+DASQ+TGSIHSVAKDVGRFSK+LRTKR
Sbjct: 61  LPFSSSFSSSSPRRSSSPLLHRRPAAGYAAALVDASQTTGSIHSVAKDVGRFSKVLRTKR 120

Query: 121 IGEILNDPCVGEEEKGRLVREIVGKGGFEKQMVKLTKMLIEKKRLGILKEVLSEFERIYD 180
           IG  LNDP V EEEKGRLVREI  KGGFEKQ+VKLTKMLIEKKRLGIL EVLSEFERIYD
Sbjct: 121 IGGFLNDPFVVEEEKGRLVREIAAKGGFEKQVVKLTKMLIEKKRLGILNEVLSEFERIYD 180

Query: 181 ELCGTEVVLVSSSRKMEEEELFGIAKNVQRLCGAVKVKVRSFIHGGLMV 229
           ELCGTEVVLVSS+RKM+EEELFGIAKNVQRL GA+KVKVRSFI+GGLMV
Sbjct: 181 ELCGTEVVLVSSNRKMQEEELFGIAKNVQRLSGAMKVKVRSFINGGLMV 229

[Close]

BLAST of Tan0007565 vs. ExPASy TrEMBL
Match: A0A0A0L326 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119340 PE=3 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 2.7e-89
Identity = 187/232 (80.60%), Postives = 208/232 (89.66%), Query Frame = 0


Query: 1   MDTLTT-SVST-LRVPS-TVTSSREFLHLKNHTAHLPHRSPSRRSNSISKPPGFLSTHKT 60
           MDTLTT SVS+ LRVPS T+TSSR+FLHLKN TAHLPHRSPSR SNSISKPP FLST +T
Sbjct: 1   MDTLTTPSVSSALRVPSRTLTSSRDFLHLKNPTAHLPHRSPSRTSNSISKPPNFLSTPQT 60

Query: 61  LNP-LPFPPSSSASPRRSSSPVLHRRPAAGYAAALIDASQSTGSIHSVAKDVGRFSKLLR 120
           LNP +PF     ++PRRSSSP+LHRRPA+GYAAAL+DASQSTG+IHSVAKDVGRFSKLLR
Sbjct: 61  LNPSIPF-----STPRRSSSPLLHRRPASGYAAALLDASQSTGTIHSVAKDVGRFSKLLR 120

Query: 121 TKRIGEILNDPCVGEEEKGRLVREIVGKGGFEKQMVKLTKMLIEKKRLGILKEVLSEFER 180
            KRIG +LNDP VG+EEKGRLV+EI  KGGFE+Q+VKLTKMLIEK +L IL EV SEFER
Sbjct: 121 GKRIGRVLNDPLVGDEEKGRLVKEIAVKGGFERQVVKLTKMLIEKSKLSILTEVFSEFER 180

Query: 181 IYDELCGTEVVLVSSSRKMEEEELFGIAKNVQRLCGAVKVKVRSFIHGGLMV 229
           +YDELCGTEVV+VSSS+KMEEEEL GIAKNVQRL GA+KVKVRSFIHGGLMV
Sbjct: 181 VYDELCGTEVVMVSSSKKMEEEELIGIAKNVQRLSGAIKVKVRSFIHGGLMV 227

[Close]

BLAST of Tan0007565 vs. ExPASy TrEMBL
Match: A0A5D3DC09 (ATP synthase delta chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00810 PE=3 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 3.0e-88
Identity = 184/232 (79.31%), Postives = 204/232 (87.93%), Query Frame = 0


Query: 1   MDTLTTS--VSTLRVPS-TVTSSREFLHLKNHTAHLPHRSPSRRSNSISKPPGFLSTHKT 60
           MDTLTT+   STLRVPS T+ SSR+FLHLKN TAHLPHRSP R SNSISKPP FLST KT
Sbjct: 1   MDTLTTTSVSSTLRVPSRTLASSRDFLHLKNPTAHLPHRSPPRTSNSISKPPNFLSTPKT 60

Query: 61  LNP-LPFPPSSSASPRRSSSPVLHRRPAAGYAAALIDASQSTGSIHSVAKDVGRFSKLLR 120
           LNP +PF     ++PRRSSSP+LHRRPA+GYAAAL+DASQSTG+IHSVAKDVGRFSKLLR
Sbjct: 61  LNPSIPF-----STPRRSSSPLLHRRPASGYAAALVDASQSTGTIHSVAKDVGRFSKLLR 120

Query: 121 TKRIGEILNDPCVGEEEKGRLVREIVGKGGFEKQMVKLTKMLIEKKRLGILKEVLSEFER 180
            KRIG +LNDP VG+EEKGRLV+EI  KGGFE+Q+VKLTKMLIEK  L IL EV SEF+R
Sbjct: 121 GKRIGRVLNDPLVGDEEKGRLVKEIAVKGGFERQVVKLTKMLIEKCNLRILTEVFSEFDR 180

Query: 181 IYDELCGTEVVLVSSSRKMEEEELFGIAKNVQRLCGAVKVKVRSFIHGGLMV 229
           IYDELCGTEVV+VSS++KMEEEELFGIAKN QRL GAVKVKVRSF+HGGLMV
Sbjct: 181 IYDELCGTEVVMVSSNKKMEEEELFGIAKNAQRLSGAVKVKVRSFVHGGLMV 227

[Close]

BLAST of Tan0007565 vs. TAIR 10
Match: AT4G09650.1 (ATP synthase delta-subunit gene )

HSP 1 Score: 73.9 bits (180), Expect = 1.8e-13
Identity = 39/144 (27.08%), Postives = 77/144 (53.47%), Query Frame = 0


Query: 84  AAGYAAALIDASQSTGSIHSVAKDVGRFSKLLRTKRIGEILNDPCVGEEEKGRLVREIVG 143
           A+ YA AL D ++   ++     D+ +  ++    ++     +P +  E+K +++ +IV 
Sbjct: 52  ASSYAMALADVAKRNDTMELTVTDIEKLEQVFSDPQVLNFFANPTITVEKKRQVIDDIVK 111

Query: 144 KGGFEKQMVKLTKMLIEKKRLGILKEVLSEFERIYDELCGTEVVLVSSSRKMEEEELFGI 203
               +        +L++  R+ I+ E++ EFE +Y++L  T++  V S  K+E  +L  I
Sbjct: 112 SSSLQSHTSNFLNVLVDANRINIVTEIVKEFELVYNKLTDTQLAEVRSVVKLEAPQLAQI 171

Query: 204 AKNVQRLCGAVKVKVRSFIHGGLM 228
           AK VQ+L GA  V+V++ I   L+
Sbjct: 172 AKQVQKLTGAKNVRVKTVIDASLV 195

[Close]

BLAST of Tan0007565 vs. TAIR 10
Match: AT4G00895.1 (ATPase, F1 complex, OSCP/delta subunit protein )

HSP 1 Score: 67.8 bits (164), Expect = 1.3e-11
Identity = 68/204 (33.33%), Postives = 98/204 (48.04%), Query Frame = 0


Query: 1   MDTLTTSVSTLRVPSTVTSSREFLH-LKNHTAHLPHRSPSRRSNSISKP----PGFLSTH 60
           MDTL+ SVS+L +PS     +  L  + +      + + S  S ++SKP    P   S  
Sbjct: 1   MDTLSASVSSLNLPSLPPPPQPPLRSISSRFKSTVNATTSASSTNLSKPTSSSPSSASYS 60

Query: 61  KTLNPLPFPPSSSASPRRSSS-------PVLHRRPAAGYAAALIDASQSTGSIHSVAKDV 120
           +  NP      S   P+   S       P +H + A+G+AAAL+   QS   +    +DV
Sbjct: 61  QNRNPNFLKAISFHLPQTKPSRVVTPPPPPVHDKAASGFAAALVSVCQSKNCLGRTQEDV 120

Query: 121 GRFSKLLRTKRIGEILNDPCVGEEEKGR--LVREIVGKGGFEKQMVKLTKMLIEKKRLGI 180
            R  + L             VGEE+K    LV ++V +G F K    L KMLI + + GI
Sbjct: 121 RRLMEFL-------------VGEEKKRNKVLVNDVVERGKFGKHFKGLVKMLIARGKSGI 180

Query: 181 LKEVLSEFERIYDELCGTEVVLVS 191
           L +VL EFERI +EL   ++V VS
Sbjct: 181 LVDVLMEFERICNELVSKKLVWVS 191

The following BLAST results are available for this feature:

BLAST of Tan0007565 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P32980	1.1e-18	34.03	ATP synthase delta chain, chloroplastic OS=Nicotiana tabacum OX=4097 GN=ATPD PE=...	[more]
Q02758	1.1e-15	29.44	ATP synthase delta chain, chloroplastic OS=Pisum sativum OX=3888 GN=ATPD PE=1 SV...	[more]
P11402	1.9e-15	28.57	ATP synthase delta chain, chloroplastic OS=Spinacia oleracea OX=3562 GN=ATPD PE=...	[more]
Q07300	5.5e-15	31.45	ATP synthase delta chain, chloroplastic OS=Sorghum bicolor OX=4558 GN=ATPD PE=2 ...	[more]
Q42687	5.2e-13	26.40	ATP synthase delta chain, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=...	[more]

BLAST of Tan0007565 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022974855.1	1.7e-101	88.21	ATP synthase delta chain, chloroplastic-like [Cucurbita maxima] >XP_022974856.1 ...	[more]
XP_023540771.1	1.4e-100	87.28	ATP synthase delta chain, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_022975394.1	1.8e-100	87.28	ATP synthase delta chain, chloroplastic-like [Cucurbita maxima]	[more]
XP_022934549.1	9.1e-100	87.34	ATP synthase delta chain, chloroplastic-like [Cucurbita moschata] >XP_022934555....	[more]
KAG7028532.1	1.3e-98	86.40	ATP synthase delta chain, chloroplastic, partial [Cucurbita argyrosperma subsp. ...	[more]

BLAST of Tan0007565 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IF16	8.0e-102	88.21	ATP synthase delta chain, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1IKE3	8.9e-101	87.28	ATP synthase delta chain, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1F2X7	4.4e-100	87.34	ATP synthase delta chain, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A0A0L326	2.7e-89	80.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119340 PE=3 SV=1	[more]
A0A5D3DC09	3.0e-88	79.31	ATP synthase delta chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]

BLAST of Tan0007565 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G09650.1	1.8e-13	27.08	ATP synthase delta-subunit gene	[more]
AT4G00895.1	1.3e-11	33.33	ATPase, F1 complex, OSCP/delta subunit protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000711	ATPase, OSCP/delta subunit	PRINTS	PR00125	ATPASEDELTA	coord: 83..102 score: 29.0 coord: 152..163 score: 26.67 coord: 163..177 score: 28.33
IPR000711	ATPase, OSCP/delta subunit	PFAM	PF00213	OSCP	coord: 86..227 e-value: 4.9E-22 score: 78.8
IPR000711	ATPase, OSCP/delta subunit	TIGRFAM	TIGR01145	TIGR01145	coord: 84..223 e-value: 2.4E-17 score: 61.7
IPR000711	ATPase, OSCP/delta subunit	PANTHER	PTHR11910	ATP SYNTHASE DELTA CHAIN	coord: 1..221
IPR026015	F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily	GENE3D	1.10.520.20		coord: 84..175 e-value: 1.0E-17 score: 66.5
IPR026015	F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily	SUPERFAMILY	47928	N-terminal domain of the delta subunit of the F1F0-ATP synthase	coord: 85..181
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..79
None	No IPR available	PANTHER	PTHR11910:SF8	ATPASE, F1 COMPLEX, OSCP/DELTA SUBUNIT PROTEIN	coord: 1..221

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0007565.1	Tan0007565.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
biological_process	GO:0009767	photosynthetic electron transport chain
cellular_component	GO:0016020	membrane
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism