Tan0007494 (gene) Snake gourd v1

Overview


Name	Tan0007494
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Germin-like protein
Location	LG04: 83642709 .. 83643512 (-)
RNA-Seq Expression	Tan0007494
Synteny	Tan0007494

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACTAAAAATGAAGAAACCATCATCTTCTTTAATTTTCCTTCCGTTTGTGTTGTTTTCTTGTCTTGGAATTTCACTTGCAGATTCTAATAATGTCTTTGATTCTTGTCCAACAGCCACTAACAGAACTGAGTTCATCAATGGCTTCCCTTGCAAAAACCCCACCATTGTTACAACTTCTGATTTCAACTCAGCTAAGTTAACGGGACCGGTCAATACCGATGATCGGTTCAGCTCGTTGGTGAAGATCGTCACTGCTGCAGACTTCCCTGGTCTTAATACATTGGGGCTCTCTATTTCTAGAACTGATTTGGGCACCGACGCCATCGTTTCTCCTCACTCGCACCCGAGAGCCACTGAGATTTTCTTTGTGAGTCAAGGTACGTACTGAGTTTGAGTGGTGAATTAACATGGTATCAGAATCAAAGGTTCTATGTTCGTCCTCCTTTTTTCTCATCTCTTTCGACAACTATGATTCACAGGAATCGTTCTAGCTGGATTCATCGACACCAAGAACCGACTGTTTCAGGATTTTCTAAAAGCAGGCGACTTGATTGTATTTCCAAAGGGGTTGTTACACTTCTGCCTGAATTCTGGTTATGAGACTGCCACCATTTTCTCTGTGTATAACAGTCAGAATCCAGGAGTCGTGAACGTCAATGGCGCCATGTTCGAGCCTGCTGATTCGAGACATTTCATAGACAAGTTCCTTGAGAGATTAAAGGCTCTTTCTTCACTGTCAGATCTCAAATTCAACCCAAATGTAACTCTTCCCAGATACATAAGTTTGTAAAACTATAGAAC

mRNA sequence

AAAACTAAAAATGAAGAAACCATCATCTTCTTTAATTTTCCTTCCGTTTGTGTTGTTTTCTTGTCTTGGAATTTCACTTGCAGATTCTAATAATGTCTTTGATTCTTGTCCAACAGCCACTAACAGAACTGAGTTCATCAATGGCTTCCCTTGCAAAAACCCCACCATTGTTACAACTTCTGATTTCAACTCAGCTAAGTTAACGGGACCGGTCAATACCGATGATCGGTTCAGCTCGTTGGTGAAGATCGTCACTGCTGCAGACTTCCCTGGTCTTAATACATTGGGGCTCTCTATTTCTAGAACTGATTTGGGCACCGACGCCATCGTTTCTCCTCACTCGCACCCGAGAGCCACTGAGATTTTCTTTGTGAGTCAAGGAATCGTTCTAGCTGGATTCATCGACACCAAGAACCGACTGTTTCAGGATTTTCTAAAAGCAGGCGACTTGATTGTATTTCCAAAGGGGTTGTTACACTTCTGCCTGAATTCTGGTTATGAGACTGCCACCATTTTCTCTGTGTATAACAGTCAGAATCCAGGAGTCGTGAACGTCAATGGCGCCATGTTCGAGCCTGCTGATTCGAGACATTTCATAGACAAGTTCCTTGAGAGATTAAAGGCTCTTTCTTCACTGTCAGATCTCAAATTCAACCCAAATGTAACTCTTCCCAGATACATAAGTTTGTAAAACTATAGAAC

Coding sequence (CDS)

ATGAAGAAACCATCATCTTCTTTAATTTTCCTTCCGTTTGTGTTGTTTTCTTGTCTTGGAATTTCACTTGCAGATTCTAATAATGTCTTTGATTCTTGTCCAACAGCCACTAACAGAACTGAGTTCATCAATGGCTTCCCTTGCAAAAACCCCACCATTGTTACAACTTCTGATTTCAACTCAGCTAAGTTAACGGGACCGGTCAATACCGATGATCGGTTCAGCTCGTTGGTGAAGATCGTCACTGCTGCAGACTTCCCTGGTCTTAATACATTGGGGCTCTCTATTTCTAGAACTGATTTGGGCACCGACGCCATCGTTTCTCCTCACTCGCACCCGAGAGCCACTGAGATTTTCTTTGTGAGTCAAGGAATCGTTCTAGCTGGATTCATCGACACCAAGAACCGACTGTTTCAGGATTTTCTAAAAGCAGGCGACTTGATTGTATTTCCAAAGGGGTTGTTACACTTCTGCCTGAATTCTGGTTATGAGACTGCCACCATTTTCTCTGTGTATAACAGTCAGAATCCAGGAGTCGTGAACGTCAATGGCGCCATGTTCGAGCCTGCTGATTCGAGACATTTCATAGACAAGTTCCTTGAGAGATTAAAGGCTCTTTCTTCACTGTCAGATCTCAAATTCAACCCAAATGTAACTCTTCCCAGATACATAAGTTTGTAA

Protein sequence

MKKPSSSLIFLPFVLFSCLGISLADSNNVFDSCPTATNRTEFINGFPCKNPTIVTTSDFNSAKLTGPVNTDDRFSSLVKIVTAADFPGLNTLGLSISRTDLGTDAIVSPHSHPRATEIFFVSQGIVLAGFIDTKNRLFQDFLKAGDLIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVVNVNGAMFEPADSRHFIDKFLERLKALSSLSDLKFNPNVTLPRYISL

Homology

[Close]

BLAST of Tan0007494 vs. ExPASy Swiss-Prot
Match: Q9FLT3 (Germin-like protein subfamily 3 member 4 OS=Arabidopsis thaliana OX=3702 GN=At5g61750 PE=2 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 7.3e-52
Identity = 107/202 (52.97%), Postives = 139/202 (68.81%), Query Frame = 0


Query: 10  FLPFVLFSCLGISLA-DSNNVFDSCPTATNRTE--FINGFPCKNPTIVTTSDFNSAKLTG 69
           F   ++F  + +S++ DS+N+ D+CPTA       FING+PCKNPT +T  DF S KLT 
Sbjct: 3   FFVVIVFCAIFLSVSGDSDNMQDTCPTAPGEQSIFFINGYPCKNPTKITAQDFKSTKLTE 62

Query: 70  PVNTDDRFSSLVKIVTAADFPGLNTLGLSISRTDLGTDAIVSPHSHPRATEIFFVSQGIV 129
             +TD+   S V ++TA +FPGLNTLGLS+SRTDL  D  V  HSHPR++E+ FV +G+V
Sbjct: 63  AGDTDNYLQSNVTLLTALEFPGLNTLGLSVSRTDLERDGSVPFHSHPRSSEMLFVVKGVV 122

Query: 130 LAGFIDTKNRLFQDFLKAGDLIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVVNVNGAM 189
            AGF+DT N++FQ  L+ GD+ VFPKGLLHFCL+ G+E AT FS YNSQNPGVVN+ G +
Sbjct: 123 FAGFVDTNNKIFQTVLQKGDVFVFPKGLLHFCLSGGFEPATAFSFYNSQNPGVVNI-GEV 182

Query: 190 FEPADSRHFIDKFLERLKALSS 209
           F   D  H   K + R  A  S
Sbjct: 183 F-GIDQEHI--KIMTRCLATGS 200

[Close]

BLAST of Tan0007494 vs. ExPASy Swiss-Prot
Match: Q2R352 (Germin-like protein 11-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0537350 PE=2 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.4e-42
Identity = 85/169 (50.30%), Postives = 112/169 (66.27%), Query Frame = 0


Query: 23  LADSNNVFDSCPTAT--NRTEFINGFPCKNPTIVTTSDFNSAKLTGPVNTDDRFSSLVKI 82
           ++DS  + D CP A    R  F+NGF CK+P+ +  SDF +  L    + D+   S   I
Sbjct: 22  ISDSPPLQDVCPMAPQGERKLFMNGFFCKSPSTIMASDFKTLLLNHAGDLDNMVRSSANI 81

Query: 83  VTAADFPGLNTLGLSISRTDLGTDAIVSPHSHPRATEIFFVSQGIVLAGFIDTKNRLFQD 142
           +TA +FPGLNTLG+S++RTD+     V PHSHPRA+E+ FV  G V+AGF DTK +LFQ 
Sbjct: 82  ITATEFPGLNTLGISMARTDIAVSGAVLPHSHPRASEMMFVHSGSVVAGFFDTKGKLFQK 141

Query: 143 FLKAGDLIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVVNVNGAMFEP 190
            L  GD+ +FP+GL+HF +N G+  AT FSV NSQNPGVV +  AMF P
Sbjct: 142 TLAEGDVFIFPRGLVHFIMNYGFGLATTFSVLNSQNPGVVGITHAMFAP 190

[Close]

BLAST of Tan0007494 vs. ExPASy Swiss-Prot
Match: P94014 (Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana OX=3702 GN=GLP4 PE=2 SV=2)

HSP 1 Score: 137.1 bits (344), Expect = 2.4e-31
Identity = 75/187 (40.11%), Postives = 105/187 (56.15%), Query Frame = 0


Query: 1   MKKPSSSLIFLPFVLFSCLGISLADSNNVFDSCPTATNRTEFINGFPCKNPTIVTTSDFN 60
           M  P+ +L+ L     S    S AD + + D C         INGFPCK+   VT++DF 
Sbjct: 1   MASPTLTLLLL-LTTVSFFISSSADPDMLQDLCVADLPSGIKINGFPCKDAATVTSADFF 60

Query: 61  SAKLTGPVNTDDRFSSLVKIVTAADFPGLNTLGLSISRTDLGTDAIVSPHSHPRATEIFF 120
           S  L  P  T++ F +LV        PGLNTLG+S+SR D     +  PH+HPRATE+ F
Sbjct: 61  SQGLAKPGLTNNTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVF 120

Query: 121 VSQGIVLAGFIDTKNRLFQDFLKAGDLIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVV 180
           V +G +  GF+ T N+L    LK GD+  FPKGL+HF  N+G   A++ + +NSQ PG  
Sbjct: 121 VLEGTLDVGFLTTANKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPGTQ 180

Query: 181 NVNGAMF 188
           ++   +F
Sbjct: 181 SLGATLF 186

[Close]

BLAST of Tan0007494 vs. ExPASy Swiss-Prot
Match: P45852 (Germin-like protein OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.6e-30
Identity = 68/153 (44.44%), Postives = 89/153 (58.17%), Query Frame = 0


Query: 42  FINGFPCKNPTIVTTSDFNSAKLTGPVNTDDRFSSLVKIVTAADFPGLNTLGLSISRTDL 101
           F+NG  CK+P  V   DF    L  P NTD+       +VTAA+ PGLNTLG+S++R D 
Sbjct: 43  FVNGLFCKDPMEVNPDDFLFRGLNMPANTDNALGFAATLVTAANLPGLNTLGISVARLDF 102

Query: 102 GTDAIVSPHSHPRATEIFFVSQGIVLAGFI-----DTKNRLFQDFLKAGDLIVFPKGLLH 161
               +  PH+HPRATE+F V +G    GF+     D  N+LF   L  GD+ VFP+GL+H
Sbjct: 103 APHGLNPPHTHPRATEVFVVLEGTFYVGFVTSNLADGGNKLFAKVLNKGDVFVFPQGLIH 162

Query: 162 FCLNSGYETATIFSVYNSQNPGVVNVNGAMFEP 190
           F LN G       S  +SQNPGV+ +  A+F P
Sbjct: 163 FQLNIGNYPGVGISGLSSQNPGVITIANAVFGP 195

[Close]

BLAST of Tan0007494 vs. ExPASy Swiss-Prot
Match: Q7XSN6 (Germin-like protein 4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0617900 PE=2 SV=2)

HSP 1 Score: 132.9 bits (333), Expect = 4.6e-30
Identity = 73/170 (42.94%), Postives = 96/170 (56.47%), Query Frame = 0


Query: 24  ADSNNVFDSCPTATNRTEFINGFPCKNPTIVTTSDFNSAKLTG-PVNTDDRFSSLVKIVT 83
           +D + + D C        F+NGF CKNP  VT +DF   K  G P NT +   S V  VT
Sbjct: 28  SDPSQLQDFCVADKLSAVFVNGFVCKNPKQVTANDFFLPKALGVPGNTVNAQGSAVTPVT 87

Query: 84  AADFPGLNTLGLSISRTDLGTDAIVSPHSHPRATEIFFVSQGIVLAGFIDTK-----NRL 143
             + PGLNTLG+S +R D   +    PH+HPRATEI  V QG +L GF+ +      N  
Sbjct: 88  VNELPGLNTLGISFARIDFAPNGQNPPHTHPRATEILTVLQGTLLVGFVTSNQPGGGNLQ 147

Query: 144 FQDFLKAGDLIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVVNVNGAMF 188
           F   L  GD+ VFP+GL+HF LN+G   A   +  +SQNPGV+ +  A+F
Sbjct: 148 FTKLLGPGDVFVFPQGLIHFQLNNGAVPAVAIAALSSQNPGVITIANAVF 197

[Close]

BLAST of Tan0007494 vs. NCBI nr
Match: XP_023522282.1 (germin-like protein subfamily 3 member 4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 412.9 bits (1060), Expect = 1.8e-111
Identity = 202/226 (89.38%), Postives = 216/226 (95.58%), Query Frame = 0


Query: 1   MKKPSSSLIFLPFVLFSCLGISLADSNNVFDSCPTATNRTEFINGFPCKNPTIVTTSDFN 60
           M KPSSSLIFL  VLFSCLGIS+ADS+NVFDSCPTAT+R +FINGFPCKNPTIV T DF 
Sbjct: 15  MNKPSSSLIFLLVVLFSCLGISVADSHNVFDSCPTATDRIDFINGFPCKNPTIVRTDDFT 74

Query: 61  SAKLTGPVNTDDRFSSLVKIVTAADFPGLNTLGLSISRTDLGTDAIVSPHSHPRATEIFF 120
           SAKLTGPVNTDDRFSSLVK+VTAADFPGLN+LGLSISRTDLGTDAI+SPHSHPRATE+FF
Sbjct: 75  SAKLTGPVNTDDRFSSLVKVVTAADFPGLNSLGLSISRTDLGTDAIISPHSHPRATEMFF 134

Query: 121 VSQGIVLAGFIDTKNRLFQDFLKAGDLIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVV 180
           V+QGIVLAGFIDTKNRLFQ+FLK GD+IVFPKGLLHFCLNSGYETATIFSVYNSQNPGVV
Sbjct: 135 VNQGIVLAGFIDTKNRLFQEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVV 194

Query: 181 NVNGAMFEPADSRHFIDKFLERLKALSSLSDLKFNPNVTLPRYISL 227
           NVNGAMFEPADS HFIDKFL++LKALSSL +LKFNPNVTLPRYISL
Sbjct: 195 NVNGAMFEPADSSHFIDKFLDKLKALSSLPNLKFNPNVTLPRYISL 240

[Close]

BLAST of Tan0007494 vs. NCBI nr
Match: KAG6606852.1 (Germin-like protein subfamily 3 member 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036559.1 Germin-like protein subfamily 3 member 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 411.4 bits (1056), Expect = 5.1e-111
Identity = 202/226 (89.38%), Postives = 214/226 (94.69%), Query Frame = 0


Query: 1   MKKPSSSLIFLPFVLFSCLGISLADSNNVFDSCPTATNRTEFINGFPCKNPTIVTTSDFN 60
           M KP SSLIFL  V FSCLGIS+ADS+NVFDSCPTAT+R +FINGFPCKNPTIV T DF 
Sbjct: 1   MNKPLSSLIFLLVVFFSCLGISVADSHNVFDSCPTATDRIDFINGFPCKNPTIVRTDDFT 60

Query: 61  SAKLTGPVNTDDRFSSLVKIVTAADFPGLNTLGLSISRTDLGTDAIVSPHSHPRATEIFF 120
           SAKLTGPVNTDDRFSSLVK+VTAADFPGLN+LGLSISRTDLGTDAIVSPHSHPRATE+FF
Sbjct: 61  SAKLTGPVNTDDRFSSLVKVVTAADFPGLNSLGLSISRTDLGTDAIVSPHSHPRATEMFF 120

Query: 121 VSQGIVLAGFIDTKNRLFQDFLKAGDLIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVV 180
           V+QGIVLAGFIDTKNRLFQ+FLK GD+IVFPKGLLHFCLNSGYETATIFSVYNSQNPGVV
Sbjct: 121 VNQGIVLAGFIDTKNRLFQEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVV 180

Query: 181 NVNGAMFEPADSRHFIDKFLERLKALSSLSDLKFNPNVTLPRYISL 227
           NVNGAMFEPADS HFIDKFL++LKALSSL DLKFNPNVTLPRYISL
Sbjct: 181 NVNGAMFEPADSSHFIDKFLDKLKALSSLPDLKFNPNVTLPRYISL 226

[Close]

BLAST of Tan0007494 vs. NCBI nr
Match: XP_022948659.1 (germin-like protein subfamily 3 member 4 [Cucurbita moschata] >XP_022948660.1 germin-like protein subfamily 3 member 4 [Cucurbita moschata])

HSP 1 Score: 410.2 bits (1053), Expect = 1.1e-110
Identity = 201/226 (88.94%), Postives = 215/226 (95.13%), Query Frame = 0


Query: 1   MKKPSSSLIFLPFVLFSCLGISLADSNNVFDSCPTATNRTEFINGFPCKNPTIVTTSDFN 60
           M KPSSSLIFL  V FSCLGIS+ADS+NVFDSCPTAT+R +FINGFPCKNPTIV T DF 
Sbjct: 1   MNKPSSSLIFLLVVFFSCLGISVADSHNVFDSCPTATDRIDFINGFPCKNPTIVRTDDFT 60

Query: 61  SAKLTGPVNTDDRFSSLVKIVTAADFPGLNTLGLSISRTDLGTDAIVSPHSHPRATEIFF 120
           SAKLTGPVNTDDRFSSLVK+VTAADFPGLN+LGLSISRTDLGTDAIVSPHSHPRATE+FF
Sbjct: 61  SAKLTGPVNTDDRFSSLVKVVTAADFPGLNSLGLSISRTDLGTDAIVSPHSHPRATEMFF 120

Query: 121 VSQGIVLAGFIDTKNRLFQDFLKAGDLIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVV 180
           V+QGIVLAGFIDTKNRLFQ+FLK GD+IVFPKGLLHFCLNSGYETATIFSVYNSQNPGVV
Sbjct: 121 VNQGIVLAGFIDTKNRLFQEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVV 180

Query: 181 NVNGAMFEPADSRHFIDKFLERLKALSSLSDLKFNPNVTLPRYISL 227
           NVNGAMF+PADS HFIDKFL++LKALSSL +LKFNPNVTLPRYISL
Sbjct: 181 NVNGAMFKPADSSHFIDKFLDKLKALSSLPNLKFNPNVTLPRYISL 226

[Close]

BLAST of Tan0007494 vs. NCBI nr
Match: XP_022998490.1 (germin-like protein subfamily 3 member 4 [Cucurbita maxima])

HSP 1 Score: 407.9 bits (1047), Expect = 5.6e-110
Identity = 198/226 (87.61%), Postives = 214/226 (94.69%), Query Frame = 0


Query: 1   MKKPSSSLIFLPFVLFSCLGISLADSNNVFDSCPTATNRTEFINGFPCKNPTIVTTSDFN 60
           M KPSSSLIFL  V FSCLGI++ADS+NVFDSCPTAT+R +F+NGFPCKNPT+V T DF 
Sbjct: 1   MNKPSSSLIFLLLVFFSCLGIAVADSHNVFDSCPTATDRIDFVNGFPCKNPTVVRTDDFT 60

Query: 61  SAKLTGPVNTDDRFSSLVKIVTAADFPGLNTLGLSISRTDLGTDAIVSPHSHPRATEIFF 120
           SAKLTGPVNTDDRFSSLVK+VTAADFPGLN+LGLSISRTDLGTDAIVSPHSHPRATE+FF
Sbjct: 61  SAKLTGPVNTDDRFSSLVKVVTAADFPGLNSLGLSISRTDLGTDAIVSPHSHPRATEMFF 120

Query: 121 VSQGIVLAGFIDTKNRLFQDFLKAGDLIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVV 180
           V+QGIVLAGFIDTKNRLFQ+FLK GD+IVFPKGLLHFCLNSGYETATIFSVYNSQNPGVV
Sbjct: 121 VNQGIVLAGFIDTKNRLFQEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVV 180

Query: 181 NVNGAMFEPADSRHFIDKFLERLKALSSLSDLKFNPNVTLPRYISL 227
           NVNGAMFEPADS HFID FL++LKALSSL +LKFNPNVTLPRYISL
Sbjct: 181 NVNGAMFEPADSSHFIDMFLDKLKALSSLPNLKFNPNVTLPRYISL 226

[Close]

BLAST of Tan0007494 vs. NCBI nr
Match: XP_022153439.1 (germin-like protein subfamily 3 member 4 [Momordica charantia])

HSP 1 Score: 390.6 bits (1002), Expect = 9.3e-105
Identity = 196/228 (85.96%), Postives = 212/228 (92.98%), Query Frame = 0


Query: 1   MKKP-SSSLIF-LPFVLFSCLGISLADSNNVFDSCPTATNRTEFINGFPCKNPTIVTTSD 60
           MKKP SSSLIF L FVLFSCLGIS+ADSNNVFD+CPTATN++EFINGFPCKNPTIVTTSD
Sbjct: 1   MKKPSSSSLIFLLLFVLFSCLGISVADSNNVFDTCPTATNKSEFINGFPCKNPTIVTTSD 60

Query: 61  FNSAKLTGPVNTDDRFSSLVKIVTAADFPGLNTLGLSISRTDLGTDAIVSPHSHPRATEI 120
           FNSAKLTGPV+TDD+F S V I+TAA+F GLNTLGLSISRTDLGTDAIVSPHSHPRATEI
Sbjct: 61  FNSAKLTGPVDTDDQFISSVNILTAAEFSGLNTLGLSISRTDLGTDAIVSPHSHPRATEI 120

Query: 121 FFVSQGIVLAGFIDTKNRLFQDFLKAGDLIVFPKGLLHFCLNSGYETATIFSVYNSQNPG 180
           FFV+QGIVLAGF+DTKNRLFQ FLKAGD++VFPKGLLHFCLNSGYE A IFSV+NSQNPG
Sbjct: 121 FFVNQGIVLAGFLDTKNRLFQSFLKAGDVMVFPKGLLHFCLNSGYEPAIIFSVFNSQNPG 180

Query: 181 VVNVNGAMFEPADSRHFIDKFLERLKALSSLSDLKFNPNVTLPRYISL 227
           VVN+NGAMFEPADS H + KFLERLK+LSSLS LKFNPNVTL  YISL
Sbjct: 181 VVNINGAMFEPADSNHLVHKFLERLKSLSSLSSLKFNPNVTLTTYISL 228

[Close]

BLAST of Tan0007494 vs. ExPASy TrEMBL
Match: A0A6J1GAI2 (Germin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111452269 PE=3 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 5.5e-111
Identity = 201/226 (88.94%), Postives = 215/226 (95.13%), Query Frame = 0


Query: 1   MKKPSSSLIFLPFVLFSCLGISLADSNNVFDSCPTATNRTEFINGFPCKNPTIVTTSDFN 60
           M KPSSSLIFL  V FSCLGIS+ADS+NVFDSCPTAT+R +FINGFPCKNPTIV T DF 
Sbjct: 1   MNKPSSSLIFLLVVFFSCLGISVADSHNVFDSCPTATDRIDFINGFPCKNPTIVRTDDFT 60

Query: 61  SAKLTGPVNTDDRFSSLVKIVTAADFPGLNTLGLSISRTDLGTDAIVSPHSHPRATEIFF 120
           SAKLTGPVNTDDRFSSLVK+VTAADFPGLN+LGLSISRTDLGTDAIVSPHSHPRATE+FF
Sbjct: 61  SAKLTGPVNTDDRFSSLVKVVTAADFPGLNSLGLSISRTDLGTDAIVSPHSHPRATEMFF 120

Query: 121 VSQGIVLAGFIDTKNRLFQDFLKAGDLIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVV 180
           V+QGIVLAGFIDTKNRLFQ+FLK GD+IVFPKGLLHFCLNSGYETATIFSVYNSQNPGVV
Sbjct: 121 VNQGIVLAGFIDTKNRLFQEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVV 180

Query: 181 NVNGAMFEPADSRHFIDKFLERLKALSSLSDLKFNPNVTLPRYISL 227
           NVNGAMF+PADS HFIDKFL++LKALSSL +LKFNPNVTLPRYISL
Sbjct: 181 NVNGAMFKPADSSHFIDKFLDKLKALSSLPNLKFNPNVTLPRYISL 226

[Close]

BLAST of Tan0007494 vs. ExPASy TrEMBL
Match: A0A6J1KCN7 (Germin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111493105 PE=3 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 2.7e-110
Identity = 198/226 (87.61%), Postives = 214/226 (94.69%), Query Frame = 0


Query: 1   MKKPSSSLIFLPFVLFSCLGISLADSNNVFDSCPTATNRTEFINGFPCKNPTIVTTSDFN 60
           M KPSSSLIFL  V FSCLGI++ADS+NVFDSCPTAT+R +F+NGFPCKNPT+V T DF 
Sbjct: 1   MNKPSSSLIFLLLVFFSCLGIAVADSHNVFDSCPTATDRIDFVNGFPCKNPTVVRTDDFT 60

Query: 61  SAKLTGPVNTDDRFSSLVKIVTAADFPGLNTLGLSISRTDLGTDAIVSPHSHPRATEIFF 120
           SAKLTGPVNTDDRFSSLVK+VTAADFPGLN+LGLSISRTDLGTDAIVSPHSHPRATE+FF
Sbjct: 61  SAKLTGPVNTDDRFSSLVKVVTAADFPGLNSLGLSISRTDLGTDAIVSPHSHPRATEMFF 120

Query: 121 VSQGIVLAGFIDTKNRLFQDFLKAGDLIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVV 180
           V+QGIVLAGFIDTKNRLFQ+FLK GD+IVFPKGLLHFCLNSGYETATIFSVYNSQNPGVV
Sbjct: 121 VNQGIVLAGFIDTKNRLFQEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVV 180

Query: 181 NVNGAMFEPADSRHFIDKFLERLKALSSLSDLKFNPNVTLPRYISL 227
           NVNGAMFEPADS HFID FL++LKALSSL +LKFNPNVTLPRYISL
Sbjct: 181 NVNGAMFEPADSSHFIDMFLDKLKALSSLPNLKFNPNVTLPRYISL 226

[Close]

BLAST of Tan0007494 vs. ExPASy TrEMBL
Match: A0A6J1DJ19 (Germin-like protein OS=Momordica charantia OX=3673 GN=LOC111020943 PE=3 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 4.5e-105
Identity = 196/228 (85.96%), Postives = 212/228 (92.98%), Query Frame = 0


Query: 1   MKKP-SSSLIF-LPFVLFSCLGISLADSNNVFDSCPTATNRTEFINGFPCKNPTIVTTSD 60
           MKKP SSSLIF L FVLFSCLGIS+ADSNNVFD+CPTATN++EFINGFPCKNPTIVTTSD
Sbjct: 1   MKKPSSSSLIFLLLFVLFSCLGISVADSNNVFDTCPTATNKSEFINGFPCKNPTIVTTSD 60

Query: 61  FNSAKLTGPVNTDDRFSSLVKIVTAADFPGLNTLGLSISRTDLGTDAIVSPHSHPRATEI 120
           FNSAKLTGPV+TDD+F S V I+TAA+F GLNTLGLSISRTDLGTDAIVSPHSHPRATEI
Sbjct: 61  FNSAKLTGPVDTDDQFISSVNILTAAEFSGLNTLGLSISRTDLGTDAIVSPHSHPRATEI 120

Query: 121 FFVSQGIVLAGFIDTKNRLFQDFLKAGDLIVFPKGLLHFCLNSGYETATIFSVYNSQNPG 180
           FFV+QGIVLAGF+DTKNRLFQ FLKAGD++VFPKGLLHFCLNSGYE A IFSV+NSQNPG
Sbjct: 121 FFVNQGIVLAGFLDTKNRLFQSFLKAGDVMVFPKGLLHFCLNSGYEPAIIFSVFNSQNPG 180

Query: 181 VVNVNGAMFEPADSRHFIDKFLERLKALSSLSDLKFNPNVTLPRYISL 227
           VVN+NGAMFEPADS H + KFLERLK+LSSLS LKFNPNVTL  YISL
Sbjct: 181 VVNINGAMFEPADSNHLVHKFLERLKSLSSLSSLKFNPNVTLTTYISL 228

[Close]

BLAST of Tan0007494 vs. ExPASy TrEMBL
Match: A0A5D3DCK1 (Germin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1199G00230 PE=3 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.5e-95
Identity = 183/229 (79.91%), Postives = 202/229 (88.21%), Query Frame = 0


Query: 1   MKKPS--SSLIF-LPFVLFSCLGISLADSNNVFDSCPTATNRTEFINGFPCKNPTIVTTS 60
           MK PS  SSLIF L FVLFSCLGISLADSNNVFD+CPTAT+R EFING+ CK+PT+VTTS
Sbjct: 1   MKNPSLASSLIFLLLFVLFSCLGISLADSNNVFDTCPTATDRIEFINGYHCKSPTLVTTS 60

Query: 61  DFNSAKLTGPVNTDDRFSSLVKIVTAADFPGLNTLGLSISRTDLGTDAIVSPHSHPRATE 120
           DFNSAKLT PVNTDDR + +VKIVTAADF GLNTLGLSISRTDL  DAIVSPHSHPRATE
Sbjct: 61  DFNSAKLTEPVNTDDRINLVVKIVTAADFHGLNTLGLSISRTDLVIDAIVSPHSHPRATE 120

Query: 121 IFFVSQGIVLAGFIDTKNRLFQDFLKAGDLIVFPKGLLHFCLNSGYETATIFSVYNSQNP 180
           +FF++QGIVLAGFIDT+N+LFQ  LKAGD+IVFPKGLLHFCLNSGYE A  FSVYNSQNP
Sbjct: 121 MFFLNQGIVLAGFIDTRNQLFQTILKAGDVIVFPKGLLHFCLNSGYEPAISFSVYNSQNP 180

Query: 181 GVVNVNGAMFEPADSRHFIDKFLERLKALSSLSDLKFNPNVTLPRYISL 227
           GVVN+NGA+F+PADS HFI+KFL+RL   SS S+ K NPNVTL RY SL
Sbjct: 181 GVVNINGAVFDPADSSHFIEKFLKRLTVPSSQSNFKLNPNVTLSRYTSL 229

[Close]

BLAST of Tan0007494 vs. ExPASy TrEMBL
Match: A0A1S3CNX7 (Germin-like protein OS=Cucumis melo OX=3656 GN=LOC103503059 PE=3 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.5e-95
Identity = 183/229 (79.91%), Postives = 202/229 (88.21%), Query Frame = 0


Query: 1   MKKPS--SSLIF-LPFVLFSCLGISLADSNNVFDSCPTATNRTEFINGFPCKNPTIVTTS 60
           MK PS  SSLIF L FVLFSCLGISLADSNNVFD+CPTAT+R EFING+ CK+PT+VTTS
Sbjct: 1   MKNPSLASSLIFLLLFVLFSCLGISLADSNNVFDTCPTATDRIEFINGYHCKSPTLVTTS 60

Query: 61  DFNSAKLTGPVNTDDRFSSLVKIVTAADFPGLNTLGLSISRTDLGTDAIVSPHSHPRATE 120
           DFNSAKLT PVNTDDR + +VKIVTAADF GLNTLGLSISRTDL  DAIVSPHSHPRATE
Sbjct: 61  DFNSAKLTEPVNTDDRINLVVKIVTAADFHGLNTLGLSISRTDLVIDAIVSPHSHPRATE 120

Query: 121 IFFVSQGIVLAGFIDTKNRLFQDFLKAGDLIVFPKGLLHFCLNSGYETATIFSVYNSQNP 180
           +FF++QGIVLAGFIDT+N+LFQ  LKAGD+IVFPKGLLHFCLNSGYE A  FSVYNSQNP
Sbjct: 121 MFFLNQGIVLAGFIDTRNQLFQTILKAGDVIVFPKGLLHFCLNSGYEPAISFSVYNSQNP 180

Query: 181 GVVNVNGAMFEPADSRHFIDKFLERLKALSSLSDLKFNPNVTLPRYISL 227
           GVVN+NGA+F+PADS HFI+KFL+RL   SS S+ K NPNVTL RY SL
Sbjct: 181 GVVNINGAVFDPADSSHFIEKFLKRLTVPSSQSNFKLNPNVTLSRYTSL 229

[Close]

BLAST of Tan0007494 vs. TAIR 10
Match: AT5G61750.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 205.3 bits (521), Expect = 5.2e-53
Identity = 107/202 (52.97%), Postives = 139/202 (68.81%), Query Frame = 0


Query: 10  FLPFVLFSCLGISLA-DSNNVFDSCPTATNRTE--FINGFPCKNPTIVTTSDFNSAKLTG 69
           F   ++F  + +S++ DS+N+ D+CPTA       FING+PCKNPT +T  DF S KLT 
Sbjct: 3   FFVVIVFCAIFLSVSGDSDNMQDTCPTAPGEQSIFFINGYPCKNPTKITAQDFKSTKLTE 62

Query: 70  PVNTDDRFSSLVKIVTAADFPGLNTLGLSISRTDLGTDAIVSPHSHPRATEIFFVSQGIV 129
             +TD+   S V ++TA +FPGLNTLGLS+SRTDL  D  V  HSHPR++E+ FV +G+V
Sbjct: 63  AGDTDNYLQSNVTLLTALEFPGLNTLGLSVSRTDLERDGSVPFHSHPRSSEMLFVVKGVV 122

Query: 130 LAGFIDTKNRLFQDFLKAGDLIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVVNVNGAM 189
            AGF+DT N++FQ  L+ GD+ VFPKGLLHFCL+ G+E AT FS YNSQNPGVVN+ G +
Sbjct: 123 FAGFVDTNNKIFQTVLQKGDVFVFPKGLLHFCLSGGFEPATAFSFYNSQNPGVVNI-GEV 182

Query: 190 FEPADSRHFIDKFLERLKALSS 209
           F   D  H   K + R  A  S
Sbjct: 183 F-GIDQEHI--KIMTRCLATGS 200

[Close]

BLAST of Tan0007494 vs. TAIR 10
Match: AT1G09560.1 (germin-like protein 5 )

HSP 1 Score: 137.1 bits (344), Expect = 1.7e-32
Identity = 75/187 (40.11%), Postives = 105/187 (56.15%), Query Frame = 0


Query: 1   MKKPSSSLIFLPFVLFSCLGISLADSNNVFDSCPTATNRTEFINGFPCKNPTIVTTSDFN 60
           M  P+ +L+ L     S    S AD + + D C         INGFPCK+   VT++DF 
Sbjct: 1   MASPTLTLLLL-LTTVSFFISSSADPDMLQDLCVADLPSGIKINGFPCKDAATVTSADFF 60

Query: 61  SAKLTGPVNTDDRFSSLVKIVTAADFPGLNTLGLSISRTDLGTDAIVSPHSHPRATEIFF 120
           S  L  P  T++ F +LV        PGLNTLG+S+SR D     +  PH+HPRATE+ F
Sbjct: 61  SQGLAKPGLTNNTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVF 120

Query: 121 VSQGIVLAGFIDTKNRLFQDFLKAGDLIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVV 180
           V +G +  GF+ T N+L    LK GD+  FPKGL+HF  N+G   A++ + +NSQ PG  
Sbjct: 121 VLEGTLDVGFLTTANKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPGTQ 180

Query: 181 NVNGAMF 188
           ++   +F
Sbjct: 181 SLGATLF 186

[Close]

BLAST of Tan0007494 vs. TAIR 10
Match: AT1G02335.1 (germin-like protein subfamily 2 member 2 precursor )

HSP 1 Score: 130.2 bits (326), Expect = 2.1e-30
Identity = 69/182 (37.91%), Postives = 100/182 (54.95%), Query Frame = 0


Query: 14  VLFSCL---GISLADSNNVFDSCPTATNRTEFINGFPCKNPTIVTTSDFNSAKLTGPVNT 73
           +  SC+    I   D + + D C    +    +NGFPCK    +T SDF  A ++ P   
Sbjct: 10  IALSCIMITSIRAYDPDALQDLCVADKSHGTKLNGFPCKETLNITESDFFFAGISKPAVI 69

Query: 74  DDRFSSLVKIVTAADFPGLNTLGLSISRTDLGTDAIVSPHSHPRATEIFFVSQGIVLAGF 133
           +    S V        PGLNTL +S++R D     +  PH+HPRATE+ +V +G +  GF
Sbjct: 70  NSTMGSAVTGANVEKIPGLNTLSVSLARIDYAPGGLNPPHTHPRATEVVYVLEGELEVGF 129

Query: 134 IDTKNRLFQDFLKAGDLIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVVNVNGAMF--E 191
           I T N+LF   +K G++ VFP+GL+HF  N+G   A++ S +NSQ PG  +V   +F  E
Sbjct: 130 ITTANKLFTKTIKIGEVFVFPRGLVHFQKNNGKSPASVLSAFNSQLPGTASVAATLFAAE 189

[Close]

BLAST of Tan0007494 vs. TAIR 10
Match: AT3G04200.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 128.3 bits (321), Expect = 8.0e-30
Identity = 74/172 (43.02%), Postives = 98/172 (56.98%), Query Frame = 0


Query: 21  ISLADSNNVFDSCPTA--TNRTEFINGFPCKNPTIVTTSDFNSAKLTGPVNTDDRFSSLV 80
           +S  D N + D C  A  TNR  F+NG  CK+P  VT +DF+ + L    NT +   S V
Sbjct: 23  VSCYDPNPLQDFCVAASETNRV-FVNGKFCKDPKSVTANDFSYSGLNIARNTTNFLGSNV 82

Query: 81  KIVTAADFPGLNTLGLSISRTDLGTDAIVSPHSHPRATEIFFVSQGIVLAGFIDT---KN 140
             V     PGLNTLG+S++R D        PH HPRATEI  V++G +L GF+ +    N
Sbjct: 83  TTVDVNKIPGLNTLGVSLARLDFAQGGQNPPHIHPRATEILVVTKGKLLVGFVSSNQDNN 142

Query: 141 RLFQDFLKAGDLIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVVNVNGAMF 188
           RLF   LK GD+ VFP GL+HF +N     A  F+ + SQNPG + +  A+F
Sbjct: 143 RLFYKVLKRGDVFVFPIGLIHFQMNVRRTRAVAFAGFGSQNPGTIRIADAVF 193

[Close]

BLAST of Tan0007494 vs. TAIR 10
Match: AT1G10460.1 (germin-like protein 7 )

HSP 1 Score: 127.9 bits (320), Expect = 1.1e-29
Identity = 69/174 (39.66%), Postives = 104/174 (59.77%), Query Frame = 0


Query: 19  LGISLADSNNVFDSC---PTATNRTEFINGFPCKNPTIVTTSDFNSAKLTGPVNTDDR-F 78
           +G   +D + + D C   P ++++  F+NG  CK+PT  + SDF+++ L+ P NT  + F
Sbjct: 13  MGRVKSDPDPLQDYCVSPPPSSHQQIFLNGKLCKDPTQASVSDFSTSALSRPGNTKTKPF 72

Query: 79  SSLVKIVTAADFPGLNTLGLSISRTDLGTDAIVSPHSHPRATEIFFVSQGIVLAGFIDTK 138
              V + T A+ PGLNT+GL+++R D G   +V PH HPRA+E+     G++L GF+DT 
Sbjct: 73  MINVTVTTTANLPGLNTVGLTMARLDFGGSGVVPPHVHPRASEVTVCLDGVLLVGFVDTS 132

Query: 139 NRLFQDFLKAGDLIVFPKGLLHFCLN-SGYETATIFSVYNSQNPGVVNVNGAMF 188
            R+F   L  G+  VFPKGL+HF  N     +A   S  +SQNPG   V+ + F
Sbjct: 133 GRVFTQELHPGETFVFPKGLIHFLYNIDTVSSALAVSGLSSQNPGTQIVSLSSF 186

The following BLAST results are available for this feature:

BLAST of Tan0007494 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLT3	7.3e-52	52.97	Germin-like protein subfamily 3 member 4 OS=Arabidopsis thaliana OX=3702 GN=At5g...	[more]
Q2R352	1.4e-42	50.30	Germin-like protein 11-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g053735...	[more]
P94014	2.4e-31	40.11	Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana OX=3702 GN=GLP4...	[more]
P45852	1.6e-30	44.44	Germin-like protein OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1	[more]
Q7XSN6	4.6e-30	42.94	Germin-like protein 4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0617900...	[more]

BLAST of Tan0007494 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023522282.1	1.8e-111	89.38	germin-like protein subfamily 3 member 4 [Cucurbita pepo subsp. pepo]	[more]
KAG6606852.1	5.1e-111	89.38	Germin-like protein subfamily 3 member 4, partial [Cucurbita argyrosperma subsp....	[more]
XP_022948659.1	1.1e-110	88.94	germin-like protein subfamily 3 member 4 [Cucurbita moschata] >XP_022948660.1 ge...	[more]
XP_022998490.1	5.6e-110	87.61	germin-like protein subfamily 3 member 4 [Cucurbita maxima]	[more]
XP_022153439.1	9.3e-105	85.96	germin-like protein subfamily 3 member 4 [Momordica charantia]	[more]

BLAST of Tan0007494 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GAI2	5.5e-111	88.94	Germin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111452269 PE=3 SV=1	[more]
A0A6J1KCN7	2.7e-110	87.61	Germin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111493105 PE=3 SV=1	[more]
A0A6J1DJ19	4.5e-105	85.96	Germin-like protein OS=Momordica charantia OX=3673 GN=LOC111020943 PE=3 SV=1	[more]
A0A5D3DCK1	1.5e-95	79.91	Germin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1199...	[more]
A0A1S3CNX7	1.5e-95	79.91	Germin-like protein OS=Cucumis melo OX=3656 GN=LOC103503059 PE=3 SV=1	[more]

BLAST of Tan0007494 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G61750.1	5.2e-53	52.97	RmlC-like cupins superfamily protein	[more]
AT1G09560.1	1.7e-32	40.11	germin-like protein 5	[more]
AT1G02335.1	2.1e-30	37.91	germin-like protein subfamily 2 member 2 precursor	[more]
AT3G04200.1	8.0e-30	43.02	RmlC-like cupins superfamily protein	[more]
AT1G10460.1	1.1e-29	39.66	germin-like protein 7	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001929	Germin	PRINTS	PR00325	GERMIN	coord: 173..188 score: 41.42 coord: 110..130 score: 55.26 coord: 140..160 score: 49.5
IPR006045	Cupin 1	SMART	SM00835	Cupin_1_3	coord: 75..188 e-value: 2.4E-19 score: 80.3
IPR006045	Cupin 1	PFAM	PF00190	Cupin_1	coord: 73..184 e-value: 5.7E-29 score: 100.6
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 24..207 e-value: 4.3E-53 score: 181.7
None	No IPR available	PANTHER	PTHR31238:SF3	GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 4	coord: 12..205
None	No IPR available	PANTHER	PTHR31238	GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3	coord: 12..205
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..18 score: 6.0
None	No IPR available	CDD	cd02241	cupin_OxOx	coord: 25..187 e-value: 5.5463E-61 score: 187.803
IPR011051	RmlC-like cupin domain superfamily	SUPERFAMILY	51182	RmlC-like cupins	coord: 43..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0007494.1	Tan0007494.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0048046	apoplast
molecular_function	GO:0030145	manganese ion binding