Tan0007428 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCACTTTCAAGACCAATCAACACCTTCCCAACAGGACCAAGATCGCCAAACTTTTAATTTGTTGCCCAAAAAAAAAAGGTTCTTTCTTTTTCCTCTCTTCATTGAAATGCAAATTTTCATCTTCCTCTTACCATTGCTGAATCTCTTTCAGCCATGTTGATGATCGGTAGTTGAGATTTTTAGCTGGCTGTTTCGGACATGGGGAATTGTGTTCTTGTTCATAGAGACCAAAAATCTGGTTCTAAATTCAAGTGGTCGGTCGGTTCTAAGACTGTCGTTAATCTTAATGAGCCAACTGAGCCCAACGCTGTCGTTTTGGAAAAGGAGATCGGGAGGCTTTGTTCGAGTCCTCTGTCTTTATCGATGAACCACGTAGCCAATTCTCCAGAATTCAGTCTGATTCCTGCCTTTAAAAAAAAAAAAAATCTCTCTTTGATTTATTATATTTGAGTTTGTTTTTTGACAATTTGATTTGGTTACTTAGTTTGACGGTTTTGGTGTCGTGTTAATGCAGGTAAAGGCGACGAGATGTTTTTCGATTCACAGGCTTGGTTGGATTCTGATAACGAAGATTTCTTCAGCGTTAATGGAGGTCAGAATTAAAATGATTCAATTTTGACTTTTCAACTTGGCAACACAAATCAATTTTTACTGTGATTTTTCAATTTCATTGAATTTTAGGCTTGGATTAGTTCAAACTTTTAATATTTTGCATTTATTTTTCTTCACAGAATCATTAGAAAAAATATTCCTCTGAGTGAATTATAAAACAGAATCATAAATTTGATGGGATTCGGATAAATGCAATGTTAGAGCTGAATTGTAGTTGAAATTTGAGACTTTTTAAAAAAATCATTAGAAAAAGTATTGATTTTATTGGACTTAATTAAGTGTAGTACTACATTTTTGTTGAAATCAACGAACGAGAAATTTTATTGAGGTATTGATTTTAGTGAACTTAGTTGAAGATAAATATAAATTAAAACTAGTTTAGCTTTAAATGGTAAATGTAAAAATTAGCCAACAAATGGGGGAGTTGGAATTAACTTTAACACCTCTCTAAATTTAGTTTCAATCAGGATGAGATTGAAACTTCTTGGCAATTTGTAGTTGGTAAGAATGGATTTTCGTTTACTAGGCTGCTAAATTTCGAATGGCTTGTCTAAGTGCAGATAATACGCCGTCGTACGGCAGCACTCCGATATGGCGTCCGAACGCCGTCGAAACGCCGCCGGCGGAGCCATCTCCCAAAGACGTAAAGAAACAGCTAATTGAGCTGTTTCGCGAGAGCTTCAATAGCGATCATGGAAGATCATCAATTGCGAATACAACAAGAAATCCTCTCATTGAGCTCGTAAAAATGGAGGCTAATAATGAGAAGCCAATTTCGAGGAGGCATTCGAGATCGGTGAAAGGAAAATCGGCGCAGTCCACGCCGTGCTGCATTCCGGTTCCAAAATTGGCGCGGAGCCTGAGCCTTGGCGACAAGAAGAAGCGGCTGCTGAGCCCTTGCCGCGGCGGTGGATGATAGCCGTCGTTCGATGTGAATTTGTATGTAAACTACTGGGAACGTTTTTGAAGCTTCAAAATTTGCTTCAATAATATTTGTGCTTTTCTAATGGTCTTAACTGATCGTAACTTCATGCTCTTCTTCGTCTTCTCTGTTGTCGTGTTTTTCCATTTCAA TTCACTTTCAAGACCAATCAACACCTTCCCAACAGGACCAAGATCGCCAAACTTTTAATTTGTTGCCCAAAAAAAAAAGGTTCTTTCTTTTTCCTCTCTTCATTGAAATGCAAATTTTCATCTTCCTCTTACCATTGCTGAATCTCTTTCAGCCATGTTGATGATCGGTAGTTGAGATTTTTAGCTGGCTGTTTCGGACATGGGGAATTGTGTTCTTGTTCATAGAGACCAAAAATCTGGTTCTAAATTCAAGTGGTCGGTCGGTTCTAAGACTGTCGTTAATCTTAATGAGCCAACTGAGCCCAACGCTGTCGTTTTGGAAAAGGAGATCGGGAGGCTTTGTTCGAGTCCTCTGTCTTTATCGATGAACCACGTAGCCAATTCTCCAGAATTCAGTAAAGGCGACGAGATGTTTTTCGATTCACAGGCTTGGTTGGATTCTGATAACGAAGATTTCTTCAGCGTTAATGGAGATAATACGCCGTCGTACGGCAGCACTCCGATATGGCGTCCGAACGCCGTCGAAACGCCGCCGGCGGAGCCATCTCCCAAAGACGTAAAGAAACAGCTAATTGAGCTGTTTCGCGAGAGCTTCAATAGCGATCATGGAAGATCATCAATTGCGAATACAACAAGAAATCCTCTCATTGAGCTCGTAAAAATGGAGGCTAATAATGAGAAGCCAATTTCGAGGAGGCATTCGAGATCGGTGAAAGGAAAATCGGCGCAGTCCACGCCGTGCTGCATTCCGGTTCCAAAATTGGCGCGGAGCCTGAGCCTTGGCGACAAGAAGAAGCGGCTGCTGAGCCCTTGCCGCGGCGGTGGATGATAGCCGTCGTTCGATGTGAATTTGTATGTAAACTACTGGGAACGTTTTTGAAGCTTCAAAATTTGCTTCAATAATATTTGTGCTTTTCTAATGGTCTTAACTGATCGTAACTTCATGCTCTTCTTCGTCTTCTCTGTTGTCGTGTTTTTCCATTTCAA ATGGGGAATTGTGTTCTTGTTCATAGAGACCAAAAATCTGGTTCTAAATTCAAGTGGTCGGTCGGTTCTAAGACTGTCGTTAATCTTAATGAGCCAACTGAGCCCAACGCTGTCGTTTTGGAAAAGGAGATCGGGAGGCTTTGTTCGAGTCCTCTGTCTTTATCGATGAACCACGTAGCCAATTCTCCAGAATTCAGTAAAGGCGACGAGATGTTTTTCGATTCACAGGCTTGGTTGGATTCTGATAACGAAGATTTCTTCAGCGTTAATGGAGATAATACGCCGTCGTACGGCAGCACTCCGATATGGCGTCCGAACGCCGTCGAAACGCCGCCGGCGGAGCCATCTCCCAAAGACGTAAAGAAACAGCTAATTGAGCTGTTTCGCGAGAGCTTCAATAGCGATCATGGAAGATCATCAATTGCGAATACAACAAGAAATCCTCTCATTGAGCTCGTAAAAATGGAGGCTAATAATGAGAAGCCAATTTCGAGGAGGCATTCGAGATCGGTGAAAGGAAAATCGGCGCAGTCCACGCCGTGCTGCATTCCGGTTCCAAAATTGGCGCGGAGCCTGAGCCTTGGCGACAAGAAGAAGCGGCTGCTGAGCCCTTGCCGCGGCGGTGGATGA MGNCVLVHRDQKSGSKFKWSVGSKTVVNLNEPTEPNAVVLEKEIGRLCSSPLSLSMNHVANSPEFSKGDEMFFDSQAWLDSDNEDFFSVNGDNTPSYGSTPIWRPNAVETPPAEPSPKDVKKQLIELFRESFNSDHGRSSIANTTRNPLIELVKMEANNEKPISRRHSRSVKGKSAQSTPCCIPVPKLARSLSLGDKKKRLLSPCRGGG Homology
BLAST of Tan0007428 vs. ExPASy Swiss-Prot
Match: Q9LK32 (Uncharacterized protein At3g27210 OS=Arabidopsis thaliana OX=3702 GN=Y-2 PE=1 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.6e-08 Identity = 46/152 (30.26%), Postives = 69/152 (45.39%), Query Frame = 0
BLAST of Tan0007428 vs. NCBI nr
Match: XP_022151898.1 (uncharacterized protein At3g27210-like [Momordica charantia]) HSP 1 Score: 313.9 bits (803), Expect = 1.0e-81 Identity = 163/211 (77.25%), Postives = 182/211 (86.26%), Query Frame = 0
BLAST of Tan0007428 vs. NCBI nr
Match: XP_038891766.1 (uncharacterized protein At3g27210-like [Benincasa hispida]) HSP 1 Score: 293.1 bits (749), Expect = 1.9e-75 Identity = 163/214 (76.17%), Postives = 179/214 (83.64%), Query Frame = 0
BLAST of Tan0007428 vs. NCBI nr
Match: XP_004135310.1 (uncharacterized protein At3g27210 [Cucumis sativus] >KGN51682.1 hypothetical protein Csa_007946 [Cucumis sativus]) HSP 1 Score: 279.3 bits (713), Expect = 2.8e-71 Identity = 150/217 (69.12%), Postives = 168/217 (77.42%), Query Frame = 0
BLAST of Tan0007428 vs. NCBI nr
Match: XP_023541226.1 (uncharacterized protein At3g27210-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 272.7 bits (696), Expect = 2.6e-69 Identity = 147/212 (69.34%), Postives = 161/212 (75.94%), Query Frame = 0
BLAST of Tan0007428 vs. NCBI nr
Match: XP_022998641.1 (uncharacterized protein At3g27210-like [Cucurbita maxima]) HSP 1 Score: 271.9 bits (694), Expect = 4.5e-69 Identity = 146/214 (68.22%), Postives = 161/214 (75.23%), Query Frame = 0
BLAST of Tan0007428 vs. ExPASy TrEMBL
Match: A0A6J1DDF2 (uncharacterized protein At3g27210-like OS=Momordica charantia OX=3673 GN=LOC111019754 PE=4 SV=1) HSP 1 Score: 313.9 bits (803), Expect = 5.0e-82 Identity = 163/211 (77.25%), Postives = 182/211 (86.26%), Query Frame = 0
BLAST of Tan0007428 vs. ExPASy TrEMBL
Match: A0A0A0KTD3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G589990 PE=4 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 1.4e-71 Identity = 150/217 (69.12%), Postives = 168/217 (77.42%), Query Frame = 0
BLAST of Tan0007428 vs. ExPASy TrEMBL
Match: A0A6J1KAP3 (uncharacterized protein At3g27210-like OS=Cucurbita maxima OX=3661 GN=LOC111493225 PE=4 SV=1) HSP 1 Score: 271.9 bits (694), Expect = 2.2e-69 Identity = 146/214 (68.22%), Postives = 161/214 (75.23%), Query Frame = 0
BLAST of Tan0007428 vs. ExPASy TrEMBL
Match: A0A6J1GZB4 (uncharacterized protein At3g27210-like OS=Cucurbita moschata OX=3662 GN=LOC111458596 PE=4 SV=1) HSP 1 Score: 269.2 bits (687), Expect = 1.4e-68 Identity = 146/214 (68.22%), Postives = 160/214 (74.77%), Query Frame = 0
BLAST of Tan0007428 vs. ExPASy TrEMBL
Match: A0A5A7SSL1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G002000 PE=4 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 5.9e-67 Identity = 148/216 (68.52%), Postives = 166/216 (76.85%), Query Frame = 0
BLAST of Tan0007428 vs. TAIR 10
Match: AT3G01860.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 66 Blast hits to 66 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 67.0 bits (162), Expect = 2.0e-11 Identity = 66/228 (28.95%), Postives = 107/228 (46.93%), Query Frame = 0
BLAST of Tan0007428 vs. TAIR 10
Match: AT3G27210.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40860.1); Has 133 Blast hits to 98 proteins in 25 species: Archae - 0; Bacteria - 6; Metazoa - 32; Fungi - 7; Plants - 70; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). ) HSP 1 Score: 61.2 bits (147), Expect = 1.1e-09 Identity = 46/152 (30.26%), Postives = 69/152 (45.39%), Query Frame = 0
BLAST of Tan0007428 vs. TAIR 10
Match: AT3G01860.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 60.8 bits (146), Expect = 1.5e-09 Identity = 46/154 (29.87%), Postives = 73/154 (47.40%), Query Frame = 0
BLAST of Tan0007428 vs. TAIR 10
Match: AT5G40860.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 69 Blast hits to 69 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 47.8 bits (112), Expect = 1.3e-05 Identity = 44/132 (33.33%), Postives = 59/132 (44.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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