Tan0007400 (gene) Snake gourd v1

Overview


Name	Tan0007400
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Exocyst subunit Exo70 family protein
Location	LG04: 74948413 .. 74948795 (-)
RNA-Seq Expression	Tan0007400
Synteny	Tan0007400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAAAGATAGGTTTAAGACTTTCAACATCCAATTTGAAGAGCTTCATCAACGGCAATCTCAATGGACGGTTCACGGCGGTGAGTTCATGGAGTCGTGAGGAGGTTGGTGAGTTCTGTGAAGTTTAATTATTGTCGGCCCACCGATCCTTTATCAAGCGTTTGGGCATGTTTTCATTCATCGAACTTTAGAATAATAAAACTTTAACATATAAAATTGTGTGTATAATTTATTTGTAATTTTTGCTTGTGCAATAGGCCTATGATTGAGAATGGGAAAAATTCTAAAAAATACATCAGATATTCACCTGAGGATCTTGAGCGTATGCTAAATGAATTTTTTGAGGGCAAGACATTCAGTGTGTTGGGATTTTTGTCCTAA

mRNA sequence

ATGGTGAAAGATAGGTTTAAGACTTTCAACATCCAATTTGAAGAGCTTCATCAACGGCAATCTCAATGGACGGTTCACGGCGGTGAGTTCATGGAGTCGCCTATGATTGAGAATGGGAAAAATTCTAAAAAATACATCAGATATTCACCTGAGGATCTTGAGCGTATGCTAAATGAATTTTTTGAGGGCAAGACATTCAGTGTGTTGGGATTTTTGTCCTAA

Coding sequence (CDS)

ATGGTGAAAGATAGGTTTAAGACTTTCAACATCCAATTTGAAGAGCTTCATCAACGGCAATCTCAATGGACGGTTCACGGCGGTGAGTTCATGGAGTCGCCTATGATTGAGAATGGGAAAAATTCTAAAAAATACATCAGATATTCACCTGAGGATCTTGAGCGTATGCTAAATGAATTTTTTGAGGGCAAGACATTCAGTGTGTTGGGATTTTTGTCCTAA

Protein sequence

MVKDRFKTFNIQFEELHQRQSQWTVHGGEFMESPMIENGKNSKKYIRYSPEDLERMLNEFFEGKTFSVLGFLS

Homology

[Close]

BLAST of Tan0007400 vs. ExPASy Swiss-Prot
Match: F4KG58 (Exocyst complex component EXO70A3 OS=Arabidopsis thaliana OX=3702 GN=EXO70A3 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 7.6e-19
Identity = 48/89 (53.93%), Postives = 58/89 (65.17%), Query Frame = 0


Query: 1   MVKDRFKTFNIQFEELHQRQSQWTVHGGEFMES---------------------PMIENG 60
           +VK++FKTFN QFEELHQRQ QW+V   E  ES                     PMIE+G
Sbjct: 494 LVKEKFKTFNSQFEELHQRQCQWSVSDVELRESLRLAIAEVLLPAYGSFLKRFGPMIESG 553

Query: 61  KNSKKYIRYSPEDLERMLNEFFEGKTFSV 69
           KNS+KYIR++PEDLERMLN+FF+GK   V
Sbjct: 554 KNSQKYIRFTPEDLERMLNDFFQGKNLDV 582

[Close]

BLAST of Tan0007400 vs. ExPASy Swiss-Prot
Match: Q9LZD3 (Exocyst complex component EXO70A1 OS=Arabidopsis thaliana OX=3702 GN=EXO70A1 PE=1 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 6.1e-16
Identity = 42/88 (47.73%), Postives = 56/88 (63.64%), Query Frame = 0


Query: 1   MVKDRFKTFNIQFEELHQRQSQWTVHGGEFMES---------------------PMIENG 60
           ++K+RFK FN+QF+ELHQRQSQWTV   E  ES                     P++E+G
Sbjct: 547 LLKERFKMFNMQFDELHQRQSQWTVPDTELRESLRLAVAEVLLPAYRSFLKRFGPLVESG 606

Query: 61  KNSKKYIRYSPEDLERMLNEFFEGKTFS 68
           KN +KYI+Y+ EDLER+L E FEGK+ +
Sbjct: 607 KNPQKYIKYTAEDLERLLGELFEGKSMN 634

[Close]

BLAST of Tan0007400 vs. ExPASy Swiss-Prot
Match: Q9FGH9 (Exocyst complex component EXO70B1 OS=Arabidopsis thaliana OX=3702 GN=EXO70B1 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.3e-05
Identity = 28/85 (32.94%), Postives = 41/85 (48.24%), Query Frame = 0


Query: 2   VKDRFKTFNIQFEELHQRQSQWTVHGGEFMESPMI---------------------ENGK 61
           +K++ K FNIQF+E+ +  S W V   +  E   I                     + GK
Sbjct: 536 MKEKLKQFNIQFDEICKVHSTWVVFDEQLKEELKISLARLLVPAYGSFIGRFQNLGDIGK 595

Query: 62  NSKKYIRYSPEDLERMLNEFFEGKT 66
           N+ KYI+Y  ED+E  +NE F+G T
Sbjct: 596 NADKYIKYGVEDIEARINELFKGTT 620

[Close]

BLAST of Tan0007400 vs. NCBI nr
Match: TYK07447.1 (exocyst complex component EXO70A1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 120.2 bits (300), Expect = 7.6e-24
Identity = 61/76 (80.26%), Postives = 63/76 (82.89%), Query Frame = 0


Query: 1   MVKDRFKTFNIQFEELHQRQSQWTVHGGEFMES---PMIENGKNSKKYIRYSPEDLERML 60
           MVKDRFKTFNIQFEELHQRQSQWTV   E  ES   PMIENGKN +KYIRYSPEDLERML
Sbjct: 547 MVKDRFKTFNIQFEELHQRQSQWTVPDSELRESLSRPMIENGKNPQKYIRYSPEDLERML 606

Query: 61  NEFFEGKTFSVLGFLS 74
           NEFFEGKTF   G +S
Sbjct: 607 NEFFEGKTFISGGVIS 622

[Close]

BLAST of Tan0007400 vs. NCBI nr
Match: EXC21222.1 (Exocyst complex component 7 [Morus notabilis])

HSP 1 Score: 116.3 bits (290), Expect = 1.1e-22
Identity = 57/67 (85.07%), Postives = 60/67 (89.55%), Query Frame = 0


Query: 1   MVKDRFKTFNIQFEELHQRQSQWTVHGGEFMESPMIENGKNSKKYIRYSPEDLERMLNEF 60
           MVKDRFKTFNIQFEELHQRQSQWTV   E  E PMIENGKN +KYIRY+PEDLERMLNEF
Sbjct: 204 MVKDRFKTFNIQFEELHQRQSQWTVPDSELRE-PMIENGKNPQKYIRYAPEDLERMLNEF 263

Query: 61  FEGKTFS 68
           FEGKT+S
Sbjct: 264 FEGKTWS 269

[Close]

BLAST of Tan0007400 vs. NCBI nr
Match: XP_031742727.1 (exocyst complex component EXO70A1 [Cucumis sativus] >KGN48579.2 hypothetical protein Csa_004374 [Cucumis sativus])

HSP 1 Score: 113.2 bits (282), Expect = 9.3e-22
Identity = 60/88 (68.18%), Postives = 61/88 (69.32%), Query Frame = 0


Query: 1   MVKDRFKTFNIQFEELHQRQSQWTVHGGEFMES---------------------PMIENG 60
           MVKDRFKTFNIQFEELHQRQSQWTV   E  ES                     PMIENG
Sbjct: 547 MVKDRFKTFNIQFEELHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFIKRFGPMIENG 606

Query: 61  KNSKKYIRYSPEDLERMLNEFFEGKTFS 68
           KN +KYIRYSPEDLERMLNEFFEGKTFS
Sbjct: 607 KNPQKYIRYSPEDLERMLNEFFEGKTFS 634

[Close]

BLAST of Tan0007400 vs. NCBI nr
Match: XP_038881234.1 (exocyst complex component EXO70A1 [Benincasa hispida])

HSP 1 Score: 113.2 bits (282), Expect = 9.3e-22
Identity = 60/88 (68.18%), Postives = 61/88 (69.32%), Query Frame = 0


Query: 1   MVKDRFKTFNIQFEELHQRQSQWTVHGGEFMES---------------------PMIENG 60
           MVKDRFKTFNIQFEELHQRQSQWTV   E  ES                     PMIENG
Sbjct: 547 MVKDRFKTFNIQFEELHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFIKRFGPMIENG 606

Query: 61  KNSKKYIRYSPEDLERMLNEFFEGKTFS 68
           KN +KYIRYSPEDLERMLNEFFEGKTFS
Sbjct: 607 KNPQKYIRYSPEDLERMLNEFFEGKTFS 634

[Close]

BLAST of Tan0007400 vs. NCBI nr
Match: XP_008462620.1 (PREDICTED: exocyst complex component EXO70A1 isoform X2 [Cucumis melo])

HSP 1 Score: 113.2 bits (282), Expect = 9.3e-22
Identity = 60/88 (68.18%), Postives = 61/88 (69.32%), Query Frame = 0


Query: 1   MVKDRFKTFNIQFEELHQRQSQWTVHGGEFMES---------------------PMIENG 60
           MVKDRFKTFNIQFEELHQRQSQWTV   E  ES                     PMIENG
Sbjct: 547 MVKDRFKTFNIQFEELHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFIKRFGPMIENG 606

Query: 61  KNSKKYIRYSPEDLERMLNEFFEGKTFS 68
           KN +KYIRYSPEDLERMLNEFFEGKTFS
Sbjct: 607 KNPQKYIRYSPEDLERMLNEFFEGKTFS 634

[Close]

BLAST of Tan0007400 vs. ExPASy TrEMBL
Match: A0A5D3C6C9 (Exocyst subunit Exo70 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001770 PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.7e-24
Identity = 61/76 (80.26%), Postives = 63/76 (82.89%), Query Frame = 0


Query: 1   MVKDRFKTFNIQFEELHQRQSQWTVHGGEFMES---PMIENGKNSKKYIRYSPEDLERML 60
           MVKDRFKTFNIQFEELHQRQSQWTV   E  ES   PMIENGKN +KYIRYSPEDLERML
Sbjct: 547 MVKDRFKTFNIQFEELHQRQSQWTVPDSELRESLSRPMIENGKNPQKYIRYSPEDLERML 606

Query: 61  NEFFEGKTFSVLGFLS 74
           NEFFEGKTF   G +S
Sbjct: 607 NEFFEGKTFISGGVIS 622

[Close]

BLAST of Tan0007400 vs. ExPASy TrEMBL
Match: A0A0A0KFG7 (Exocyst subunit Exo70 family protein OS=Cucumis sativus OX=3659 GN=Csa_6G454990 PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.7e-24
Identity = 60/70 (85.71%), Postives = 61/70 (87.14%), Query Frame = 0


Query: 1  MVKDRFKTFNIQFEELHQRQSQWTVHGGEFMES---PMIENGKNSKKYIRYSPEDLERML 60
          MVKDRFKTFNIQFEELHQRQSQWTV   E  ES   PMIENGKN +KYIRYSPEDLERML
Sbjct: 1  MVKDRFKTFNIQFEELHQRQSQWTVPDSELRESLSRPMIENGKNPQKYIRYSPEDLERML 60

Query: 61 NEFFEGKTFS 68
          NEFFEGKTFS
Sbjct: 61 NEFFEGKTFS 70

[Close]

BLAST of Tan0007400 vs. ExPASy TrEMBL
Match: W9SC98 (Exocyst subunit Exo70 family protein OS=Morus notabilis OX=981085 GN=L484_002232 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 5.3e-23
Identity = 57/67 (85.07%), Postives = 60/67 (89.55%), Query Frame = 0


Query: 1   MVKDRFKTFNIQFEELHQRQSQWTVHGGEFMESPMIENGKNSKKYIRYSPEDLERMLNEF 60
           MVKDRFKTFNIQFEELHQRQSQWTV   E  E PMIENGKN +KYIRY+PEDLERMLNEF
Sbjct: 204 MVKDRFKTFNIQFEELHQRQSQWTVPDSELRE-PMIENGKNPQKYIRYAPEDLERMLNEF 263

Query: 61  FEGKTFS 68
           FEGKT+S
Sbjct: 264 FEGKTWS 269

[Close]

BLAST of Tan0007400 vs. ExPASy TrEMBL
Match: A0A0A0KIT8 (Exocyst subunit Exo70 family protein OS=Cucumis sativus OX=3659 GN=Csa_6G454980 PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.5e-22
Identity = 60/88 (68.18%), Postives = 61/88 (69.32%), Query Frame = 0


Query: 1   MVKDRFKTFNIQFEELHQRQSQWTVHGGEFMES---------------------PMIENG 60
           MVKDRFKTFNIQFEELHQRQSQWTV   E  ES                     PMIENG
Sbjct: 48  MVKDRFKTFNIQFEELHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFIKRFGPMIENG 107

Query: 61  KNSKKYIRYSPEDLERMLNEFFEGKTFS 68
           KN +KYIRYSPEDLERMLNEFFEGKTFS
Sbjct: 108 KNPQKYIRYSPEDLERMLNEFFEGKTFS 135

[Close]

BLAST of Tan0007400 vs. ExPASy TrEMBL
Match: A0A1S3CHE5 (Exocyst subunit Exo70 family protein OS=Cucumis melo OX=3656 GN=LOC103500934 PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.5e-22
Identity = 60/88 (68.18%), Postives = 61/88 (69.32%), Query Frame = 0


Query: 1   MVKDRFKTFNIQFEELHQRQSQWTVHGGEFMES---------------------PMIENG 60
           MVKDRFKTFNIQFEELHQRQSQWTV   E  ES                     PMIENG
Sbjct: 547 MVKDRFKTFNIQFEELHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFIKRFGPMIENG 606

Query: 61  KNSKKYIRYSPEDLERMLNEFFEGKTFS 68
           KN +KYIRYSPEDLERMLNEFFEGKTFS
Sbjct: 607 KNPQKYIRYSPEDLERMLNEFFEGKTFS 634

[Close]

BLAST of Tan0007400 vs. TAIR 10
Match: AT5G52340.1 (exocyst subunit exo70 family protein A2 )

HSP 1 Score: 101.7 bits (252), Expect = 2.6e-22
Identity = 54/87 (62.07%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 2   VKDRFKTFNIQFEELHQRQSQWTVHGGEFMES---------------------PMIENGK 61
           VKDRFKTFN QFEELHQRQ QWTV   E  ES                     PMIE+GK
Sbjct: 541 VKDRFKTFNSQFEELHQRQCQWTVPDSELRESLRLAVAEVLLPAFRSFLKRFGPMIESGK 600

Query: 62  NSKKYIRYSPEDLERMLNEFFEGKTFS 68
           N +KYIR+SPEDLERMLNEFFEGKT+S
Sbjct: 601 NPQKYIRFSPEDLERMLNEFFEGKTWS 627

[Close]

BLAST of Tan0007400 vs. TAIR 10
Match: AT5G52350.1 (exocyst subunit exo70 family protein A3 )

HSP 1 Score: 94.0 bits (232), Expect = 5.4e-20
Identity = 48/89 (53.93%), Postives = 58/89 (65.17%), Query Frame = 0


Query: 1   MVKDRFKTFNIQFEELHQRQSQWTVHGGEFMES---------------------PMIENG 60
           +VK++FKTFN QFEELHQRQ QW+V   E  ES                     PMIE+G
Sbjct: 494 LVKEKFKTFNSQFEELHQRQCQWSVSDVELRESLRLAIAEVLLPAYGSFLKRFGPMIESG 553

Query: 61  KNSKKYIRYSPEDLERMLNEFFEGKTFSV 69
           KNS+KYIR++PEDLERMLN+FF+GK   V
Sbjct: 554 KNSQKYIRFTPEDLERMLNDFFQGKNLDV 582

[Close]

BLAST of Tan0007400 vs. TAIR 10
Match: AT5G03540.1 (exocyst subunit exo70 family protein A1 )

HSP 1 Score: 84.3 bits (207), Expect = 4.3e-17
Identity = 42/88 (47.73%), Postives = 56/88 (63.64%), Query Frame = 0


Query: 1   MVKDRFKTFNIQFEELHQRQSQWTVHGGEFMES---------------------PMIENG 60
           ++K+RFK FN+QF+ELHQRQSQWTV   E  ES                     P++E+G
Sbjct: 547 LLKERFKMFNMQFDELHQRQSQWTVPDTELRESLRLAVAEVLLPAYRSFLKRFGPLVESG 606

Query: 61  KNSKKYIRYSPEDLERMLNEFFEGKTFS 68
           KN +KYI+Y+ EDLER+L E FEGK+ +
Sbjct: 607 KNPQKYIKYTAEDLERLLGELFEGKSMN 634

[Close]

BLAST of Tan0007400 vs. TAIR 10
Match: AT5G03540.2 (exocyst subunit exo70 family protein A1 )

HSP 1 Score: 84.3 bits (207), Expect = 4.3e-17
Identity = 42/88 (47.73%), Postives = 56/88 (63.64%), Query Frame = 0


Query: 1   MVKDRFKTFNIQFEELHQRQSQWTVHGGEFMES---------------------PMIENG 60
           ++K+RFK FN+QF+ELHQRQSQWTV   E  ES                     P++E+G
Sbjct: 432 LLKERFKMFNMQFDELHQRQSQWTVPDTELRESLRLAVAEVLLPAYRSFLKRFGPLVESG 491

Query: 61  KNSKKYIRYSPEDLERMLNEFFEGKTFS 68
           KN +KYI+Y+ EDLER+L E FEGK+ +
Sbjct: 492 KNPQKYIKYTAEDLERLLGELFEGKSMN 519

[Close]

BLAST of Tan0007400 vs. TAIR 10
Match: AT5G03540.3 (exocyst subunit exo70 family protein A1 )

HSP 1 Score: 84.3 bits (207), Expect = 4.3e-17
Identity = 42/88 (47.73%), Postives = 56/88 (63.64%), Query Frame = 0


Query: 1   MVKDRFKTFNIQFEELHQRQSQWTVHGGEFMES---------------------PMIENG 60
           ++K+RFK FN+QF+ELHQRQSQWTV   E  ES                     P++E+G
Sbjct: 573 LLKERFKMFNMQFDELHQRQSQWTVPDTELRESLRLAVAEVLLPAYRSFLKRFGPLVESG 632

Query: 61  KNSKKYIRYSPEDLERMLNEFFEGKTFS 68
           KN +KYI+Y+ EDLER+L E FEGK+ +
Sbjct: 633 KNPQKYIKYTAEDLERLLGELFEGKSMN 660

The following BLAST results are available for this feature:

BLAST of Tan0007400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4KG58	7.6e-19	53.93	Exocyst complex component EXO70A3 OS=Arabidopsis thaliana OX=3702 GN=EXO70A3 PE=...	[more]
Q9LZD3	6.1e-16	47.73	Exocyst complex component EXO70A1 OS=Arabidopsis thaliana OX=3702 GN=EXO70A1 PE=...	[more]
Q9FGH9	1.3e-05	32.94	Exocyst complex component EXO70B1 OS=Arabidopsis thaliana OX=3702 GN=EXO70B1 PE=...	[more]

BLAST of Tan0007400 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK07447.1	7.6e-24	80.26	exocyst complex component EXO70A1 isoform X1 [Cucumis melo var. makuwa]	[more]
EXC21222.1	1.1e-22	85.07	Exocyst complex component 7 [Morus notabilis]	[more]
XP_031742727.1	9.3e-22	68.18	exocyst complex component EXO70A1 [Cucumis sativus] >KGN48579.2 hypothetical pro...	[more]
XP_038881234.1	9.3e-22	68.18	exocyst complex component EXO70A1 [Benincasa hispida]	[more]
XP_008462620.1	9.3e-22	68.18	PREDICTED: exocyst complex component EXO70A1 isoform X2 [Cucumis melo]	[more]

BLAST of Tan0007400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C6C9	3.7e-24	80.26	Exocyst subunit Exo70 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A0A0KFG7	3.7e-24	85.71	Exocyst subunit Exo70 family protein OS=Cucumis sativus OX=3659 GN=Csa_6G454990 ...	[more]
W9SC98	5.3e-23	85.07	Exocyst subunit Exo70 family protein OS=Morus notabilis OX=981085 GN=L484_002232...	[more]
A0A0A0KIT8	4.5e-22	68.18	Exocyst subunit Exo70 family protein OS=Cucumis sativus OX=3659 GN=Csa_6G454980 ...	[more]
A0A1S3CHE5	4.5e-22	68.18	Exocyst subunit Exo70 family protein OS=Cucumis melo OX=3656 GN=LOC103500934 PE=...	[more]

BLAST of Tan0007400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52340.1	2.6e-22	62.07	exocyst subunit exo70 family protein A2	[more]
AT5G52350.1	5.4e-20	53.93	exocyst subunit exo70 family protein A3	[more]
AT5G03540.1	4.3e-17	47.73	exocyst subunit exo70 family protein A1	[more]
AT5G03540.2	4.3e-17	47.73	exocyst subunit exo70 family protein A1	[more]
AT5G03540.3	4.3e-17	47.73	exocyst subunit exo70 family protein A1	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004140	Exocyst complex component Exo70	PFAM	PF03081	Exo70	coord: 2..26 e-value: 2.9E-6 score: 26.6
IPR004140	Exocyst complex component Exo70	PANTHER	PTHR12542	EXOCYST COMPLEX PROTEIN EXO70	coord: 1..68
None	No IPR available	GENE3D	1.20.1280.170	Exocyst complex component Exo70	coord: 1..68 e-value: 4.3E-18 score: 67.3
None	No IPR available	PANTHER	PTHR12542:SF135	EXOCYST SUBUNIT EXO70 FAMILY PROTEIN	coord: 1..68
IPR016159	Cullin repeat-like-containing domain superfamily	SUPERFAMILY	74788	Cullin repeat-like	coord: 1..62

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0007400.1	Tan0007400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006887	exocytosis
biological_process	GO:0015031	protein transport
cellular_component	GO:0000145	exocyst