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Tan0007366 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTATGATGAGCAACAATGCAGGTCTGTTCGGCGACACGACACTGACGAAGGTCTTCGTCGGAGGCTTGGCTTGGGAGACTCCCAAGGAAGCCATGAGAGATCACTTCGAGAAGTTCGGCGAGATCCTGGAGGCGGTTATCATCTCCGATAAAGTCACCGGCAGATCCAAGGGCTATGGATTCGTAAGTCTCGAATTGATCATTCGGTCGTCGATGCGATTCGATTGGATTAGGATTTGAGTTTTGTGTGTTGTGTGCTGTGTTTCGATTTTTAATTAGGTTACGTTCAAGGACGCGGAATCGGCGAAGAAGGCTTGTGAGGATTCGGCTCCGATCATCAATGGCCGCCGAGCCAACTGTAATCTGGCTTCCCTTGGAGCTCGGCGCGGCTCGAGGTCGGCTTCGGCTACTCCTCCGCTAGCTCCTCAGCCTGGTAATAAAATGACTCTTCTGACTTCTCTCTCTCTCTCTCTGTTGCATGATGAAAAGGAAAGAAACTGGTCAATTGACTGAATGGCATTTTCGTAATTGCGTTAAAGAAATTTGTATGTGAAAATTTTTTGACGGTGGAGATCTGAAGTTGGTTTTGTGATGGGGAATTGAAGGATCGAACGGCGGTGGGCCGAGGACGACGTCAGCAGCGTCCGGCAACCACGTGCAGTGGTACTACCCGGCGGGGACTCATCCGACGCCGTTTCATCATCAGCCTCATCAGCAGGCCGTTCCTTTCTATGGGTATATCTTAATATCCTACGCCTTTTCCGTATCCTAATATTACCCATTTTTTATATTTTTTCCCCTTTTAAATTAACGTAAATTTCGTTTTCTTTTAGATACTCCCCAAGCCCCACCACTTACATCGCCACGGATATCAGTTACAACCACGTAAGCCTTTTTATTTTATGTTAAATTATCATTTTTGTATGATCATCATGCAAAATATTACCAAAAATTCTAAGGATCTCTTGGACTCTTTTTAATTTTTAGGATTTATTAGACAGATCAAACTTATAACATGACGAAAAAAAATTCATAATATAATTTTTAATTTTAAGAAGTAACAGATCTATTTGGTTAGTTATATTTTTGACAGTTATTTATTCTTTTGAAATAAGAAATATTTTTTCTCTCTCCTACATTACTCTCCTCTTATATTGTGAGGGACATAATGGTAGTAATGAGAGATATTACTAACCAACCTTAATTTAGAAGTTAACATGAATCTATATCTAAAAAAATTTCTAGTACTACCATAATATATAATTTTTTTTATATTACTCTCCTGGAATGTTTCTACGTCAACTTCTTTCTAAATATTATGTGGGGTCCACTAAAAATTATGTGAAATCTATTAATATCAAATATGGTACAAACCCAAAAATGTGTGGTTGATGAGTGGAGAACATAAACTTAGGTGTTGCTCGGTACTTAGTATGCCTATTCGATCTACGTATTTATTTATTGTACTAAGAAAAGTTAGCTAACATCTTAAGAGATTAGAAGTTAGAATTCAATGAAGATTTTGGCGATGGAACAGAAACTAGGGTACATGAACGGGCACTACACGCAGATGTATCCGGGGCAGGCTATGGTAGGGGCGAATGCATTGATGCCAATGTACCCGGTGTATCATTACCATCAATCACACGCGATGGGGATGCCGGCCCACATATTCCCTCCGAGTCCGACGGCGGCGGGTCCATTCACGGCGGTGCCACCGAGTTCTATTATGTCCAAACCGGCCTCCGTTGCTCCCAATCCAGGTCGGTTTTTCTCTTCTCTTCTCTTTTCTTCATTCATTTTGTTTAAACTTTTCACAATCACAGTCCGTTTTGCCCCTTTCTTCTTTTGGGTTGGGTTTTGTTTTGCCCATTGTTTTGCATGGTCCTAAAGAAAAAACCAAATACGGTCAATAGTCAAACGTTATTAACAAGAAAGAAAGAAAAAAAAAAAAAAACAGTAGCAAAAACCAGATCAGAGTCCTTCACGTGAAAGGGTAATTCCTCCCCCCACTGCCAACTGGCCTCCCTGGGTCCCACGTGGCCAGCTTGATCGGCCGGTCGTGCGGTGGTCTCTTGCTGTCCCTTTCCAGTTGTTAATATTCCATAATGTCGAGGACTCTCTTGCAAAAATCAACTACTTTTTTCTAGCTTTGTAAACGTTCAGTTTAAATACTATTTTCATTCATATACTTTTGAAAAATGATCCATTTGGTCTATTTATTTTCATTTTTTCTATGGTAATTTTGCAAACATTGATTACATTCGCCAAAATACAAGGACTAAAATCAACGTTTCGAAAACAAAATGAACCACAACCAAACATATAGAGACCAAAATGTAGAGACTAAGATAGACATTTTGGAGTAATTAAAATGGATCAAAAGTAAAAGGACATAAACTAAAATAGTATTAATTCCTAAATGTTGTGATATATGATCACGAAAATGGTTTCTCGAACTTGTTTTTACTACCCAACTTGAGCATGGTTATCTAATTACTAGATACATTTTCAATAAAGAGATTAGAGATTCACATAACCCCACCTCTACATGTAGTCAAACATGTTTTTACTAATTTTTTTTAACCACCACTAACAATTTACATGGTATGAGAGCAAAAAACAATCTTAGATTCAAATTCAAATTTCTATAATGGGGTTTTTTCCTCACTTTTCAAATCCTAATCCCTAATTCTGTTTAGAGTACAATTTGGGTTTAGTCCTCAACTCTTGTGCAGTCCAATTCAACCCCATAGAAGAATTTTTTTTTTATTATTATTATTAATTATGTGGTGTTGGAGTGGACTGTATAAGACTTGGGTGCGGCCTGAATTTTTTCCTTCTGTTCATATGATGGAATTTGTGAGGTAGATAATAATGTTGATATAAATAGAGCTAGTGAGATTTGAGATGGATTAGAAAGATGATAATTAAACTGATATTACAAAGAACAGTTTGCTTGGTTGTGGAATAATAGGTACAGTTGGAGGAGGATTCAGGGGAAGATGA ATGACTATGATGAGCAACAATGCAGGTCTGTTCGGCGACACGACACTGACGAAGGTCTTCGTCGGAGGCTTGGCTTGGGAGACTCCCAAGGAAGCCATGAGAGATCACTTCGAGAAGTTCGGCGAGATCCTGGAGGCGGTTATCATCTCCGATAAAGTCACCGGCAGATCCAAGGGCTATGGATTCGTTACGTTCAAGGACGCGGAATCGGCGAAGAAGGCTTGTGAGGATTCGGCTCCGATCATCAATGGCCGCCGAGCCAACTGTAATCTGGCTTCCCTTGGAGCTCGGCGCGGCTCGAGGTCGGCTTCGGCTACTCCTCCGCTAGCTCCTCAGCCTGGATCGAACGGCGGTGGGCCGAGGACGACGTCAGCAGCGTCCGGCAACCACGTGCAGTGGTACTACCCGGCGGGGACTCATCCGACGCCGTTTCATCATCAGCCTCATCAGCAGGCCGTTCCTTTCTATGGATACTCCCCAAGCCCCACCACTTACATCGCCACGGATATCAGTTACAACCACAAACTAGGGTACATGAACGGGCACTACACGCAGATGTATCCGGGGCAGGCTATGGTAGGGGCGAATGCATTGATGCCAATGTACCCGGTGTATCATTACCATCAATCACACGCGATGGGGATGCCGGCCCACATATTCCCTCCGAGTCCGACGGCGGCGGGTCCATTCACGGCGGTGCCACCGAGTTCTATTATGTCCAAACCGGCCTCCGTTGCTCCCAATCCAGGTACAGTTGGAGGAGGATTCAGGGGAAGATGA ATGACTATGATGAGCAACAATGCAGGTCTGTTCGGCGACACGACACTGACGAAGGTCTTCGTCGGAGGCTTGGCTTGGGAGACTCCCAAGGAAGCCATGAGAGATCACTTCGAGAAGTTCGGCGAGATCCTGGAGGCGGTTATCATCTCCGATAAAGTCACCGGCAGATCCAAGGGCTATGGATTCGTTACGTTCAAGGACGCGGAATCGGCGAAGAAGGCTTGTGAGGATTCGGCTCCGATCATCAATGGCCGCCGAGCCAACTGTAATCTGGCTTCCCTTGGAGCTCGGCGCGGCTCGAGGTCGGCTTCGGCTACTCCTCCGCTAGCTCCTCAGCCTGGATCGAACGGCGGTGGGCCGAGGACGACGTCAGCAGCGTCCGGCAACCACGTGCAGTGGTACTACCCGGCGGGGACTCATCCGACGCCGTTTCATCATCAGCCTCATCAGCAGGCCGTTCCTTTCTATGGATACTCCCCAAGCCCCACCACTTACATCGCCACGGATATCAGTTACAACCACAAACTAGGGTACATGAACGGGCACTACACGCAGATGTATCCGGGGCAGGCTATGGTAGGGGCGAATGCATTGATGCCAATGTACCCGGTGTATCATTACCATCAATCACACGCGATGGGGATGCCGGCCCACATATTCCCTCCGAGTCCGACGGCGGCGGGTCCATTCACGGCGGTGCCACCGAGTTCTATTATGTCCAAACCGGCCTCCGTTGCTCCCAATCCAGGTACAGTTGGAGGAGGATTCAGGGGAAGATGA MTMMSNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSRSASATPPLAPQPGSNGGGPRTTSAASGNHVQWYYPAGTHPTPFHHQPHQQAVPFYGYSPSPTTYIATDISYNHKLGYMNGHYTQMYPGQAMVGANALMPMYPVYHYHQSHAMGMPAHIFPPSPTAAGPFTAVPPSSIMSKPASVAPNPGTVGGGFRGR Homology
BLAST of Tan0007366 vs. ExPASy Swiss-Prot
Match: Q9M1S3 (Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=2 SV=1) HSP 1 Score: 229.6 bits (584), Expect = 4.1e-59 Identity = 141/280 (50.36%), Postives = 168/280 (60.00%), Query Frame = 0
BLAST of Tan0007366 vs. ExPASy Swiss-Prot
Match: Q5ZJX4 (RNA-binding protein 38 OS=Gallus gallus OX=9031 GN=RBM38 PE=2 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 3.1e-22 Identity = 49/85 (57.65%), Postives = 67/85 (78.82%), Query Frame = 0
BLAST of Tan0007366 vs. ExPASy Swiss-Prot
Match: Q6GQD3 (RNA-binding protein 24-A OS=Xenopus laevis OX=8355 GN=rbm24-a PE=2 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 4.0e-22 Identity = 49/85 (57.65%), Postives = 67/85 (78.82%), Query Frame = 0
BLAST of Tan0007366 vs. ExPASy Swiss-Prot
Match: Q9I8B3 (RNA-binding protein 24-B OS=Xenopus laevis OX=8355 GN=rbm24-b PE=2 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 4.0e-22 Identity = 49/85 (57.65%), Postives = 67/85 (78.82%), Query Frame = 0
BLAST of Tan0007366 vs. ExPASy Swiss-Prot
Match: Q6P8A7 (RNA-binding protein 24 OS=Xenopus tropicalis OX=8364 GN=rbm24 PE=2 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 4.0e-22 Identity = 49/85 (57.65%), Postives = 67/85 (78.82%), Query Frame = 0
BLAST of Tan0007366 vs. NCBI nr
Match: XP_038891949.1 (probable RNA-binding protein ARP1 isoform X1 [Benincasa hispida]) HSP 1 Score: 477.2 bits (1227), Expect = 8.7e-131 Identity = 245/268 (91.42%), Postives = 248/268 (92.54%), Query Frame = 0
BLAST of Tan0007366 vs. NCBI nr
Match: XP_004143608.1 (probable RNA-binding protein ARP1 isoform X1 [Cucumis sativus]) HSP 1 Score: 463.0 bits (1190), Expect = 1.7e-126 Identity = 233/253 (92.09%), Postives = 238/253 (94.07%), Query Frame = 0
BLAST of Tan0007366 vs. NCBI nr
Match: XP_038891950.1 (probable RNA-binding protein ARP1 isoform X2 [Benincasa hispida]) HSP 1 Score: 462.6 bits (1189), Expect = 2.2e-126 Identity = 237/259 (91.51%), Postives = 240/259 (92.66%), Query Frame = 0
BLAST of Tan0007366 vs. NCBI nr
Match: XP_008445852.2 (PREDICTED: probable RNA-binding protein ARP1 isoform X1 [Cucumis melo]) HSP 1 Score: 458.0 bits (1177), Expect = 5.5e-125 Identity = 235/264 (89.02%), Postives = 244/264 (92.42%), Query Frame = 0
BLAST of Tan0007366 vs. NCBI nr
Match: XP_011654915.1 (probable RNA-binding protein ARP1 isoform X2 [Cucumis sativus] >KAE8647967.1 hypothetical protein Csa_000221 [Cucumis sativus]) HSP 1 Score: 453.8 bits (1166), Expect = 1.0e-123 Identity = 228/248 (91.94%), Postives = 233/248 (93.95%), Query Frame = 0
BLAST of Tan0007366 vs. ExPASy TrEMBL
Match: A0A0A0KNL6 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G175910 PE=4 SV=1) HSP 1 Score: 463.0 bits (1190), Expect = 8.2e-127 Identity = 233/253 (92.09%), Postives = 238/253 (94.07%), Query Frame = 0
BLAST of Tan0007366 vs. ExPASy TrEMBL
Match: A0A1S3BEI0 (probable RNA-binding protein ARP1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488745 PE=4 SV=1) HSP 1 Score: 458.0 bits (1177), Expect = 2.6e-125 Identity = 235/264 (89.02%), Postives = 244/264 (92.42%), Query Frame = 0
BLAST of Tan0007366 vs. ExPASy TrEMBL
Match: A0A6J1KJN8 (probable RNA-binding protein ARP1 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111493786 PE=4 SV=1) HSP 1 Score: 449.5 bits (1155), Expect = 9.4e-123 Identity = 225/248 (90.73%), Postives = 233/248 (93.95%), Query Frame = 0
BLAST of Tan0007366 vs. ExPASy TrEMBL
Match: A0A5A7SY01 (Putative RNA-binding protein ARP1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00350 PE=4 SV=1) HSP 1 Score: 449.1 bits (1154), Expect = 1.2e-122 Identity = 230/260 (88.46%), Postives = 239/260 (91.92%), Query Frame = 0
BLAST of Tan0007366 vs. ExPASy TrEMBL
Match: A0A6J1FUE8 (probable RNA-binding protein ARP1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446973 PE=4 SV=1) HSP 1 Score: 449.1 bits (1154), Expect = 1.2e-122 Identity = 229/253 (90.51%), Postives = 236/253 (93.28%), Query Frame = 0
BLAST of Tan0007366 vs. TAIR 10
Match: AT3G54770.1 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 229.6 bits (584), Expect = 2.9e-60 Identity = 141/280 (50.36%), Postives = 168/280 (60.00%), Query Frame = 0
BLAST of Tan0007366 vs. TAIR 10
Match: AT3G54770.2 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 180.6 bits (457), Expect = 1.6e-45 Identity = 118/248 (47.58%), Postives = 142/248 (57.26%), Query Frame = 0
BLAST of Tan0007366 vs. TAIR 10
Match: AT1G22910.3 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 147.5 bits (371), Expect = 1.5e-35 Identity = 100/243 (41.15%), Postives = 127/243 (52.26%), Query Frame = 0
BLAST of Tan0007366 vs. TAIR 10
Match: AT1G22910.1 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 145.6 bits (366), Expect = 5.6e-35 Identity = 102/254 (40.16%), Postives = 130/254 (51.18%), Query Frame = 0
BLAST of Tan0007366 vs. TAIR 10
Match: AT1G22910.2 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 145.2 bits (365), Expect = 7.3e-35 Identity = 102/252 (40.48%), Postives = 130/252 (51.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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