
Tan0007268 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTTTCAACAATGCCAACAAATTCTTGTCAGCCCTGCAAATTTTCCTTTCTTACTCAAGAACAAGTAGATGAATTCTTCAGAAAGTATGACAAAAATGGTGATGGTATGATCACCATAGATGAGCTGACTGGAAATCTCCCACAAACTAAGAACCAAAATAAGGTTAAATCAAAGGCTCAGCAACAGCCAAAAGAAAAGGCAAAGGCCAAAGCCAATGAAAGCCATGCAAATGCACACAAAGTTAAAGAGCCAAAAAAGAAGCCTGATGATGCGAAAGCCAATGAACCTCCTCAAAATAAGGTTAACTCAAAGGCTCAACAACAGCCAAAAGAAAAAGGAAAGGCCAAAGCCAATGAAAGCCATGCAAATGCACACAAAGATAAAGAGCCAAAAAAGAAGCCTGATGATGCGAAAGCCAATTATGAATCTCCTTTGCACAAAGTTAGCTCAAAGGCCAACGCAAAGCCAGCAAAGAAGATTCAAGACAAAGCCCAAAAAGCCCCAGCAATAGAGTTGCACGAGAAGGGATCAATTATGCGTCTAAGTCGAGAACACATGAAGGAAATTTTTAGGGAGCACGATGTCGACGGCGATGGTTTTCTCGACTATGGTGAGCTAACAATGGCGTTTCATTTCTTAGACCCAGTTCTTTCTTGTTACAAGGCGCGCAATGGTATAGCTCATGCCGATGCCAATGGAGATGGGCTCATTAGCGAGGATGAGCTCGACAAACTTATTGACTATGCTCAAAAACTGTACGGAGAGGACTTGGTTTACTAAATTTTAATGAAATATGAAAGTGAAGCACAT CCTTTCAACAATGCCAACAAATTCTTGTCAGCCCTGCAAATTTTCCTTTCTTACTCAAGAACAAGTAGATGAATTCTTCAGAAAGTATGACAAAAATGGTGATGGTATGATCACCATAGATGAGCTGACTGGAAATCTCCCACAAACTAAGAACCAAAATAAGGTTAAATCAAAGGCTCAGCAACAGCCAAAAGAAAAGGCAAAGGCCAAAGCCAATGAAAGCCATGCAAATGCACACAAAGTTAAAGAGCCAAAAAAGAAGCCTGATGATGCGAAAGCCAATGAACCTCCTCAAAATAAGGTTAACTCAAAGGCTCAACAACAGCCAAAAGAAAAAGGAAAGGCCAAAGCCAATGAAAGCCATGCAAATGCACACAAAGATAAAGAGCCAAAAAAGAAGCCTGATGATGCGAAAGCCAATTATGAATCTCCTTTGCACAAAGTTAGCTCAAAGGCCAACGCAAAGCCAGCAAAGAAGATTCAAGACAAAGCCCAAAAAGCCCCAGCAATAGAGTTGCACGAGAAGGGATCAATTATGCGTCTAAGTCGAGAACACATGAAGGAAATTTTTAGGGAGCACGATGTCGACGGCGATGGTTTTCTCGACTATGGTGAGCTAACAATGGCGTTTCATTTCTTAGACCCAGTTCTTTCTTGTTACAAGGCGCGCAATGGTATAGCTCATGCCGATGCCAATGGAGATGGGCTCATTAGCGAGGATGAGCTCGACAAACTTATTGACTATGCTCAAAAACTGTACGGAGAGGACTTGGTTTACTAAATTTTAATGAAATATGAAAGTGAAGCACAT ATGCCAACAAATTCTTGTCAGCCCTGCAAATTTTCCTTTCTTACTCAAGAACAAGTAGATGAATTCTTCAGAAAGTATGACAAAAATGGTGATGGTATGATCACCATAGATGAGCTGACTGGAAATCTCCCACAAACTAAGAACCAAAATAAGGTTAAATCAAAGGCTCAGCAACAGCCAAAAGAAAAGGCAAAGGCCAAAGCCAATGAAAGCCATGCAAATGCACACAAAGTTAAAGAGCCAAAAAAGAAGCCTGATGATGCGAAAGCCAATGAACCTCCTCAAAATAAGGTTAACTCAAAGGCTCAACAACAGCCAAAAGAAAAAGGAAAGGCCAAAGCCAATGAAAGCCATGCAAATGCACACAAAGATAAAGAGCCAAAAAAGAAGCCTGATGATGCGAAAGCCAATTATGAATCTCCTTTGCACAAAGTTAGCTCAAAGGCCAACGCAAAGCCAGCAAAGAAGATTCAAGACAAAGCCCAAAAAGCCCCAGCAATAGAGTTGCACGAGAAGGGATCAATTATGCGTCTAAGTCGAGAACACATGAAGGAAATTTTTAGGGAGCACGATGTCGACGGCGATGGTTTTCTCGACTATGGTGAGCTAACAATGGCGTTTCATTTCTTAGACCCAGTTCTTTCTTGTTACAAGGCGCGCAATGGTATAGCTCATGCCGATGCCAATGGAGATGGGCTCATTAGCGAGGATGAGCTCGACAAACTTATTGACTATGCTCAAAAACTGTACGGAGAGGACTTGGTTTACTAA MPTNSCQPCKFSFLTQEQVDEFFRKYDKNGDGMITIDELTGNLPQTKNQNKVKSKAQQQPKEKAKAKANESHANAHKVKEPKKKPDDAKANEPPQNKVNSKAQQQPKEKGKAKANESHANAHKDKEPKKKPDDAKANYESPLHKVSSKANAKPAKKIQDKAQKAPAIELHEKGSIMRLSREHMKEIFREHDVDGDGFLDYGELTMAFHFLDPVLSCYKARNGIAHADANGDGLISEDELDKLIDYAQKLYGEDLVY Homology
BLAST of Tan0007268 vs. NCBI nr
Match: XP_023002888.1 (calmodulin-like [Cucurbita maxima]) HSP 1 Score: 109.4 bits (272), Expect = 4.7e-20 Identity = 66/140 (47.14%), Postives = 88/140 (62.86%), Query Frame = 0
BLAST of Tan0007268 vs. NCBI nr
Match: XP_022951879.1 (calmodulin-like [Cucurbita moschata] >XP_023537873.1 calmodulin-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 109.0 bits (271), Expect = 6.1e-20 Identity = 63/139 (45.32%), Postives = 86/139 (61.87%), Query Frame = 0
BLAST of Tan0007268 vs. NCBI nr
Match: XP_022951880.1 (calmodulin-like [Cucurbita moschata]) HSP 1 Score: 104.8 bits (260), Expect = 1.2e-18 Identity = 51/97 (52.58%), Postives = 70/97 (72.16%), Query Frame = 0
BLAST of Tan0007268 vs. NCBI nr
Match: XP_023537874.1 (probable calcium-binding protein CML11 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 103.6 bits (257), Expect = 2.6e-18 Identity = 51/97 (52.58%), Postives = 69/97 (71.13%), Query Frame = 0
BLAST of Tan0007268 vs. NCBI nr
Match: XP_022951134.1 (uncharacterized protein LOC111454074 isoform X1 [Cucurbita moschata]) HSP 1 Score: 103.2 bits (256), Expect = 3.4e-18 Identity = 57/106 (53.77%), Postives = 72/106 (67.92%), Query Frame = 0
BLAST of Tan0007268 vs. ExPASy TrEMBL
Match: A0A6J1KUW2 (calmodulin-like OS=Cucurbita maxima OX=3661 GN=LOC111496626 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 2.3e-20 Identity = 66/140 (47.14%), Postives = 88/140 (62.86%), Query Frame = 0
BLAST of Tan0007268 vs. ExPASy TrEMBL
Match: A0A6J1GK16 (calmodulin-like OS=Cucurbita moschata OX=3662 GN=LOC111454616 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 3.0e-20 Identity = 63/139 (45.32%), Postives = 86/139 (61.87%), Query Frame = 0
BLAST of Tan0007268 vs. ExPASy TrEMBL
Match: A0A6J1GK54 (calmodulin-like OS=Cucurbita moschata OX=3662 GN=LOC111454617 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 5.6e-19 Identity = 51/97 (52.58%), Postives = 70/97 (72.16%), Query Frame = 0
BLAST of Tan0007268 vs. ExPASy TrEMBL
Match: A0A6J1GHU7 (uncharacterized protein LOC111454074 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454074 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 1.6e-18 Identity = 57/106 (53.77%), Postives = 72/106 (67.92%), Query Frame = 0
BLAST of Tan0007268 vs. ExPASy TrEMBL
Match: A0A5A7V2Z9 (Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00190 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 3.6e-18 Identity = 50/82 (60.98%), Postives = 58/82 (70.73%), Query Frame = 0
BLAST of Tan0007268 vs. TAIR 10
Match: AT1G18530.1 (EF hand calcium-binding protein family ) HSP 1 Score: 43.9 bits (102), Expect = 2.3e-04 Identity = 23/66 (34.85%), Postives = 35/66 (53.03%), Query Frame = 0
BLAST of Tan0007268 vs. TAIR 10
Match: AT1G50700.1 (calcium-dependent protein kinase 33 ) HSP 1 Score: 43.5 bits (101), Expect = 3.0e-04 Identity = 30/78 (38.46%), Postives = 41/78 (52.56%), Query Frame = 0
BLAST of Tan0007268 vs. TAIR 10
Match: AT4G04720.1 (calcium-dependent protein kinase 21 ) HSP 1 Score: 42.4 bits (98), Expect = 6.6e-04 Identity = 30/78 (38.46%), Postives = 39/78 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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