Tan0007239 (gene) Snake gourd v1

Overview
NameTan0007239
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
LocationLG06: 66857683 .. 66858380 (-)
RNA-Seq ExpressionTan0007239
SyntenyTan0007239
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTGTTGATGATGGAGGAGAGAACAAAAGAGGAGATGACAAAGGAAAAAATGTAATTTTGGAGTTTGATGAGCGTGTTGAGTTTGAGGAACGTGTTGATGTTGAGGATCAGTCTAAGACAAAACGAAATGAAGAAGAAAAGGTAAATGAGGCAAGTAAAATTATGATTGTTATTAGTGAATTCCAGATGTTGTTATGAAGAGCTTTAGTGTGTTAGAGTGTAAGTTAGATATGGTATATGTTGAACTGCAATTGATGAAGTTTAAATATGAAAGTGTGGATGGGGTATCATCTAATGTGAATAACAATGAGAAAGATGATGAAGATGGTAATGGAGGAAAGGACATAAATGAAAAAAATGAAGAAAATGACAAATCAACTGGACGAGATGTTGAAAAGGAAAAAGAATGTGAAGGGAAAGATATTGATGATGATCGACCAGAGGAGGGAGGAAATAAAAGGACATTGGAAGGTGAGCTGCTGAATACACAAATGCTTAAGGAAGTGGAGGCAATAGAGAAGAAAATTAACGTTGAAAAGGTATCTATTTTAACGAAATGCTATGTATGATTTATAAATATTTGGTATGATTTATTTTATATATAATGATGAATATTGTTGTTATTTTTATAGGTAGAATATGTACAATGTCAACATCAAAATGATTATGCGAAGATGTACAAAGACGCGGTATGA

mRNA sequence

ATGACTGTTGATGATGGAGGAGAGAACAAAAGAGGAGATGACAAAGGAAAAAATGTAATTTTGGAGTTTGATGAGCGTGTTGAGTTTGAGGAACGTGTTGATGTTGAGGATCAGTCTAAGACAAAACGAAATGAAGAAGAAAAGAGCTTTAGTGTGTTAGAGTGTAAGTTAGATATGGTATATGTTGAACTGCAATTGATGAAGTTTAAATATGAAAGTGTGGATGGGGTATCATCTAATGTGAATAACAATGAGAAAGATGATGAAGATGGTAATGGAGGAAAGGACATAAATGAAAAAAATGAAGAAAATGACAAATCAACTGGACGAGATGTTGAAAAGGAAAAAGAATGTGAAGGGAAAGATATTGATGATGATCGACCAGAGGAGGGAGGAAATAAAAGGACATTGGAAGGTGAGCTGCTGAATACACAAATGCTTAAGGAAGTGGAGGCAATAGAGAAGAAAATTAACGTTGAAAAGGTAGAATATGTACAATGTCAACATCAAAATGATTATGCGAAGATGTACAAAGACGCGGTATGA

Coding sequence (CDS)

ATGACTGTTGATGATGGAGGAGAGAACAAAAGAGGAGATGACAAAGGAAAAAATGTAATTTTGGAGTTTGATGAGCGTGTTGAGTTTGAGGAACGTGTTGATGTTGAGGATCAGTCTAAGACAAAACGAAATGAAGAAGAAAAGAGCTTTAGTGTGTTAGAGTGTAAGTTAGATATGGTATATGTTGAACTGCAATTGATGAAGTTTAAATATGAAAGTGTGGATGGGGTATCATCTAATGTGAATAACAATGAGAAAGATGATGAAGATGGTAATGGAGGAAAGGACATAAATGAAAAAAATGAAGAAAATGACAAATCAACTGGACGAGATGTTGAAAAGGAAAAAGAATGTGAAGGGAAAGATATTGATGATGATCGACCAGAGGAGGGAGGAAATAAAAGGACATTGGAAGGTGAGCTGCTGAATACACAAATGCTTAAGGAAGTGGAGGCAATAGAGAAGAAAATTAACGTTGAAAAGGTAGAATATGTACAATGTCAACATCAAAATGATTATGCGAAGATGTACAAAGACGCGGTATGA

Protein sequence

MTVDDGGENKRGDDKGKNVILEFDERVEFEERVDVEDQSKTKRNEEEKSFSVLECKLDMVYVELQLMKFKYESVDGVSSNVNNNEKDDEDGNGGKDINEKNEENDKSTGRDVEKEKECEGKDIDDDRPEEGGNKRTLEGELLNTQMLKEVEAIEKKINVEKVEYVQCQHQNDYAKMYKDAV
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..138
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..136

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0007239.1Tan0007239.1mRNA