Tan0007154 (gene) Snake gourd v1

Overview


Name	Tan0007154
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Thymidine kinase
Location	LG05: 7940497 .. 7941849 (+)
RNA-Seq Expression	Tan0007154
Synteny	Tan0007154

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGCTTTAAGGAATTCGTTTTGGCTGACATCTGCCGATGGTGGCACCGTCAGAGCAGGATCATCTCACCGCGTCGCCGGCGAGGTTCATGTGATCATCGGACCTATGTTTGCCGGAAAAACCACCGAGCTCCTCCGCCGGATCAAATCTGAGAGCAACAGTGGCAGGTAAAACGATTTAGTTTCAGTGTAGATTGTTATTCTTATGACCTACAAAGAAGAACGAGTACTCTATCTTGATCCATACCTCAACTTTATTTTCCATGAACTCTGGTATCTGCTCTGCATATTTAGAAGATTAGACCTAGAAAAACTAAATTATGCGTTGTATTGAAACTACCTTTTTTGGTATTGAGTTGACTGGATCAATCGATATAGAATTGAAACTCTTCGACTTCAAATTGATTATGAATCGGATTTATATCTCTTTTTTCTCAGTGGATTTTTGTATTTAATTTGTTTATGATGAACAGAAACGTGGTGATGATCAAGTCAAGCAAGGACACAAGGTACGCTATTGATTCGGTTGTAACACATGATGGGGTCAAATTTCCATGCTGGGCATTGCCAGATCTCTCATCTTTCCGACAGAAATTTGGAGAGGATGCTTACAGTAAGGTATCTTTTTTGAATAATCAGTTTTTGGCTGTACTGTTGGTTTGGCAATTTTTATTTGTTTTCTAACCCATCAATTATACCGGCAGATTGATGTAATTGGTGTTGATGAAGCTCAATTTTTTGATGATCTCTATGATTTTTGCTGCAATGTTGCTGATAAAGATGGCAAAATCATTATCGTCGCCGGCCTAGATGGAGATTATCTAAGGTGCTGCTCAGATCTATCTCTTTCTCTAGTACAATTCAGCATTTCAAATATCACTTCTCAATTAAATATTTACGTAATCTCTTACATTGTAACTGTTTAGTGACTTGAAAATTGAAGCCCCTTTGATAACCCCTTGTGTTTTGATTTTTAAAAGCTTGTTTCTGATTTTGAAATTTGACTAAAAATGCAATTCAGATGCAAAATGATGGATTTTTGCCAATTTGATATGGTTGTTTTTCCATTGGCAGGAGGAGGTTTGGTTCAGTGCTTGATGTTGTACCTCTGGCTGATACAGTAACAAAGTTAACAGCTAGATGTGAACTTTGTGGAAAAAGAGCCTTCTTTACCTTGAGAAAAACAGAGGAGACAAGGACCGAGCTTATCGCTGGGGCTGATGTCTATATGCCGGTGTGCCGCCAGCACTATGCCAATGGACAAGAAGTCATACAATCTTCCAAGAATGTCCTGGGATCTCGAACTATTAGAACTGGCTCAAATCTAGAGGCACTTCCTTCACTTATCTAA

mRNA sequence

ATGGAGGCTTTAAGGAATTCGTTTTGGCTGACATCTGCCGATGGTGGCACCGTCAGAGCAGGATCATCTCACCGCGTCGCCGGCGAGGTTCATGTGATCATCGGACCTATGTTTGCCGGAAAAACCACCGAGCTCCTCCGCCGGATCAAATCTGAGAGCAACAGTGGCAGAAACGTGGTGATGATCAAGTCAAGCAAGGACACAAGGTACGCTATTGATTCGGTTGTAACACATGATGGGGTCAAATTTCCATGCTGGGCATTGCCAGATCTCTCATCTTTCCGACAGAAATTTGGAGAGGATGCTTACAGTAAGATTGATGTAATTGGTGTTGATGAAGCTCAATTTTTTGATGATCTCTATGATTTTTGCTGCAATGTTGCTGATAAAGATGGCAAAATCATTATCGTCGCCGGCCTAGATGGAGATTATCTAAGGAGGAGGTTTGGTTCAGTGCTTGATGTTGTACCTCTGGCTGATACAGTAACAAAGTTAACAGCTAGATGTGAACTTTGTGGAAAAAGAGCCTTCTTTACCTTGAGAAAAACAGAGGAGACAAGGACCGAGCTTATCGCTGGGGCTGATGTCTATATGCCGGTGTGCCGCCAGCACTATGCCAATGGACAAGAAGTCATACAATCTTCCAAGAATGTCCTGGGATCTCGAACTATTAGAACTGGCTCAAATCTAGAGGCACTTCCTTCACTTATCTAA

Coding sequence (CDS)

ATGGAGGCTTTAAGGAATTCGTTTTGGCTGACATCTGCCGATGGTGGCACCGTCAGAGCAGGATCATCTCACCGCGTCGCCGGCGAGGTTCATGTGATCATCGGACCTATGTTTGCCGGAAAAACCACCGAGCTCCTCCGCCGGATCAAATCTGAGAGCAACAGTGGCAGAAACGTGGTGATGATCAAGTCAAGCAAGGACACAAGGTACGCTATTGATTCGGTTGTAACACATGATGGGGTCAAATTTCCATGCTGGGCATTGCCAGATCTCTCATCTTTCCGACAGAAATTTGGAGAGGATGCTTACAGTAAGATTGATGTAATTGGTGTTGATGAAGCTCAATTTTTTGATGATCTCTATGATTTTTGCTGCAATGTTGCTGATAAAGATGGCAAAATCATTATCGTCGCCGGCCTAGATGGAGATTATCTAAGGAGGAGGTTTGGTTCAGTGCTTGATGTTGTACCTCTGGCTGATACAGTAACAAAGTTAACAGCTAGATGTGAACTTTGTGGAAAAAGAGCCTTCTTTACCTTGAGAAAAACAGAGGAGACAAGGACCGAGCTTATCGCTGGGGCTGATGTCTATATGCCGGTGTGCCGCCAGCACTATGCCAATGGACAAGAAGTCATACAATCTTCCAAGAATGTCCTGGGATCTCGAACTATTAGAACTGGCTCAAATCTAGAGGCACTTCCTTCACTTATCTAA

Protein sequence

MEALRNSFWLTSADGGTVRAGSSHRVAGEVHVIIGPMFAGKTTELLRRIKSESNSGRNVVMIKSSKDTRYAIDSVVTHDGVKFPCWALPDLSSFRQKFGEDAYSKIDVIGVDEAQFFDDLYDFCCNVADKDGKIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTLRKTEETRTELIAGADVYMPVCRQHYANGQEVIQSSKNVLGSRTIRTGSNLEALPSLI

Homology

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BLAST of Tan0007154 vs. ExPASy Swiss-Prot
Match: Q9S750 (Thymidine kinase a OS=Arabidopsis thaliana OX=3702 GN=TK1A PE=1 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 6.9e-85
Identity = 151/222 (68.02%), Postives = 180/222 (81.08%), Query Frame = 0


Query: 1   MEALRNSFWLTSADG---GTVRAGSSHRVAGEVHVIIGPMFAGKTTELLRRIKSESNSGR 60
           M  L+ SF + + D    G   +    R +G VHVI+GPMF+GK+T LLRRIKSE + GR
Sbjct: 1   MATLKASFLIKTLDSDVTGDFLSDLERRGSGAVHVIMGPMFSGKSTSLLRRIKSEISDGR 60

Query: 61  NVVMIKSSKDTRYAIDSVVTHDGVKFPCWALPDLSSFRQKFGEDAYSKIDVIGVDEAQFF 120
           +V M+KSSKDTRYA DSVVTHDG+ FPCWALPDL SF +KFG DAY+K+DVIG+DEAQFF
Sbjct: 61  SVAMLKSSKDTRYAKDSVVTHDGIGFPCWALPDLMSFPEKFGLDAYNKLDVIGIDEAQFF 120

Query: 121 DDLYDFCCNVADKDGKIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAF 180
            DLY+FCC VAD DGKI+IVAGLDGDYLRR FG+VLD++P+AD+VTKLTARCE+CG +AF
Sbjct: 121 GDLYEFCCKVADDDGKIVIVAGLDGDYLRRSFGAVLDIIPIADSVTKLTARCEVCGHKAF 180

Query: 181 FTLRKTEETRTELIAGADVYMPVCRQHYANGQEVIQSSKNVL 220
           FTLRK  +TRTELI GADVYMPVCR+HY     VI++SK VL
Sbjct: 181 FTLRKNCDTRTELIGGADVYMPVCRKHYITNHIVIKASKKVL 222

[Close]

BLAST of Tan0007154 vs. ExPASy Swiss-Prot
Match: O81263 (Thymidine kinase OS=Oryza sativa subsp. japonica OX=39947 GN=TK PE=2 SV=2)

HSP 1 Score: 313.5 bits (802), Expect = 2.0e-84
Identity = 145/209 (69.38%), Postives = 174/209 (83.25%), Query Frame = 0


Query: 12  SADGGTVRAGSSHRVAGEVHVIIGPMFAGKTTELLRRIKSESNSG-RNVVMIKSSKDTRY 71
           S  GG     +     GE+HVI+GPMFAGKTT LLRR++ E+ +G RNV +IKS KD RY
Sbjct: 51  SRGGGGSAMEAQPSYPGEIHVIVGPMFAGKTTALLRRVQVEAGTGSRNVALIKSDKDNRY 110

Query: 72  AIDSVVTHDGVKFPCWALPDLSSFRQKFGEDAYSKIDVIGVDEAQFFDDLYDFCCNVADK 131
            +DSVVTHDG K PCWALP+LSSF+ K G +AY K+DVIG+DEAQFFDDL+DFCC  AD+
Sbjct: 111 GLDSVVTHDGTKMPCWALPELSSFQDKLGTEAYDKVDVIGIDEAQFFDDLHDFCCKAADR 170

Query: 132 DGKIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTLRKTEETRTEL 191
           DGKI++VAGLDGDY R +FGSVLD++PLAD+VTKLTARCELCG+RAFFTLRKT ET+TEL
Sbjct: 171 DGKIVVVAGLDGDYKRNKFGSVLDIIPLADSVTKLTARCELCGRRAFFTLRKTRETKTEL 230

Query: 192 IAGADVYMPVCRQHYANGQEVIQSSKNVL 220
           I GADVYMPVCRQHY +GQ VI++++ VL
Sbjct: 231 IGGADVYMPVCRQHYLDGQIVIEATRIVL 259

[Close]

BLAST of Tan0007154 vs. ExPASy Swiss-Prot
Match: F4KBF5 (Thymidine kinase b OS=Arabidopsis thaliana OX=3702 GN=TK1B PE=1 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 3.6e-78
Identity = 130/195 (66.67%), Postives = 168/195 (86.15%), Query Frame = 0


Query: 28  GEVHVIIGPMFAGKTTELLRRIKSESNSGRNVVMIKSSKDTRYAIDSVVTHDGVKFPCWA 87
           GE+HV++GPMF+GKTT LLRRI +E  +G+ + +IKS+KDTRY  +S+VTHDG K+PCW+
Sbjct: 77  GEIHVVVGPMFSGKTTTLLRRILAERETGKRIAIIKSNKDTRYCTESIVTHDGEKYPCWS 136

Query: 88  LPDLSSFRQKFGEDAY-SKIDVIGVDEAQFFDDLYDFCCNVADKDGKIIIVAGLDGDYLR 147
           LPDLSSF+++FG D Y +++DVIG+DEAQFF DLY+FC   ADK+GK +IVAGLDGD++R
Sbjct: 137 LPDLSSFKERFGFDDYENRLDVIGIDEAQFFGDLYEFCREAADKEGKTVIVAGLDGDFMR 196

Query: 148 RRFGSVLDVVPLADTVTKLTARCELCGKRAFFTLRKTEETRTELIAGADVYMPVCRQHYA 207
           RRFGSVLD++P+ADTVTKLT+RCE+CGKRA FT+RKTEE  TELI GA+VYMPVCR HY 
Sbjct: 197 RRFGSVLDLIPIADTVTKLTSRCEVCGKRALFTMRKTEEKETELIGGAEVYMPVCRSHYV 256

Query: 208 NGQEVIQSSKNVLGS 222
            GQ V+++++ VL S
Sbjct: 257 CGQNVLETARAVLDS 271

[Close]

BLAST of Tan0007154 vs. ExPASy Swiss-Prot
Match: P23335 (Thymidine kinase OS=Swinepox virus (strain Kasza) OX=10277 GN=TK PE=3 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.6e-36
Identity = 76/178 (42.70%), Postives = 113/178 (63.48%), Query Frame = 0


Query: 28  GEVHVIIGPMFAGKTTELLRRIKSESNSGRNVVMIKSSKDTRYAIDSVVTHDGVKFPCWA 87
           G +H+I+GPMF+GK+TEL+R +     +  N  +IK SKD RY  D+V THD       +
Sbjct: 4   GFIHLILGPMFSGKSTELIRLVNRYQIATYNCRVIKYSKDNRYGNDAVYTHDKCYISAVS 63

Query: 88  LPDLSSFRQKFGEDAYSKIDVIGVDEAQFFDDLYDFCCNVADKDGKIIIVAGLDGDYLRR 147
              L   +     D    +D++G+DE QFF+D+ +FC  +A+K GKI+IVA LDG Y R+
Sbjct: 64  TDSLFDIK-----DTLDDVDIVGIDEGQFFNDIVEFCEYIANK-GKIVIVAALDGTYERK 123

Query: 148 RFGSVLDVVPLADTVTKLTARCELCGKRAFFTLRKTEETRTELIAGADVYMPVCRQHY 206
            FG++L+++PL++ VTKL A C +C + A F+ R ++E   ELI G + Y+ VCR  Y
Sbjct: 124 PFGNILNLIPLSEKVTKLNAICMICHRDASFSKRLSDEKEIELIGGKEKYLSVCRSCY 175

[Close]

BLAST of Tan0007154 vs. ExPASy Swiss-Prot
Match: Q27564 (Thymidine kinase 1 OS=Dictyostelium discoideum OX=44689 GN=thyB PE=1 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.8e-35
Identity = 94/219 (42.92%), Postives = 132/219 (60.27%), Query Frame = 0


Query: 25  RVAGEVHVIIGPMFAGKTTELLRRIKSESNSGRNVVMIKSSKDTRY--AIDS--VVTHDG 84
           ++AG++ VI GPMF+GKTTEL+RRIK  + + +  ++IK SKDTRY   ID   +VTHD 
Sbjct: 5   QIAGKIQVIFGPMFSGKTTELIRRIKRFNFANKKCLLIKYSKDTRYNDNIDKSFLVTHDK 64

Query: 85  VK---FPCWALPDLSSFRQKFGEDAYSKIDVIGVDEAQFFDDLYDFCCNVADKDGKIIIV 144
                FPC  L D+    Q +        DVIG+DE QFF D+  F  ++A++ GK +I+
Sbjct: 65  QNYQAFPCSILEDVKEQAQNY--------DVIGIDEGQFFPDVVQFSEDLANQ-GKTVII 124

Query: 145 AGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTLRKTEETRTELIAGADVY 204
           A LDG + R+ F SV+D+V  A+ +TKLTA C +C   A F+ R  E    ELI G D Y
Sbjct: 125 AALDGTFQRKPFQSVIDLVSKAEYITKLTAVCMVCYNEAAFSKRIVESDDIELIGGIDKY 184

Query: 205 MPVCRQHYANGQEVIQSSKNVLGSRTIRTGSNLEALPSL 237
           + VCR  Y + Q    S+K    S+T R  S+ ++ PS+
Sbjct: 185 ISVCRGCYNSDQNEGNSTK---PSKTAR-HSHSQSAPSV 210

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BLAST of Tan0007154 vs. NCBI nr
Match: XP_023513380.1 (thymidine kinase a [Cucurbita pepo subsp. pepo])

HSP 1 Score: 448.0 bits (1151), Expect = 5.2e-122
Identity = 220/237 (92.83%), Postives = 228/237 (96.20%), Query Frame = 0


Query: 1   MEALRNSFWLTSADGGTVRAGSSHRVAGEVHVIIGPMFAGKTTELLRRIKSESNSGRNVV 60
           ME+LRNSF LTS DGG V AGS HRVAGEVHVIIGPMFAGKTT LLRRIK+ES+SGRNVV
Sbjct: 1   MESLRNSFSLTSTDGGAVSAGSPHRVAGEVHVIIGPMFAGKTTALLRRIKAESSSGRNVV 60

Query: 61  MIKSSKDTRYAIDSVVTHDGVKFPCWALPDLSSFRQKFGEDAYSKIDVIGVDEAQFFDDL 120
           MIKSSKDTRYAIDSVVTHDG KFPCWALPDLSSFRQKFGEDAY+K+DVIGVDEAQFFDDL
Sbjct: 61  MIKSSKDTRYAIDSVVTHDGAKFPCWALPDLSSFRQKFGEDAYNKLDVIGVDEAQFFDDL 120

Query: 121 YDFCCNVADKDGKIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTL 180
           YDFCC+VADKDGKIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTL
Sbjct: 121 YDFCCDVADKDGKIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTL 180

Query: 181 RKTEETRTELIAGADVYMPVCRQHYANGQEVIQSSKNVLGSRTIRTGSNLEALPSLI 238
           RKTEETRTELIAGADVYMPVCR HYANGQEVIQSSKN+LGSR +RTGSNLEALPSLI
Sbjct: 181 RKTEETRTELIAGADVYMPVCRHHYANGQEVIQSSKNILGSRALRTGSNLEALPSLI 237

[Close]

BLAST of Tan0007154 vs. NCBI nr
Match: KAG7010772.1 (Thymidine kinase a [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 445.3 bits (1144), Expect = 3.3e-121
Identity = 219/237 (92.41%), Postives = 227/237 (95.78%), Query Frame = 0


Query: 1   MEALRNSFWLTSADGGTVRAGSSHRVAGEVHVIIGPMFAGKTTELLRRIKSESNSGRNVV 60
           ME+LRNSF LTS DGG V AGS HRVAGEVHVIIGPMFAGKTT LLRRIK+ES+SGRNVV
Sbjct: 1   MESLRNSFSLTSTDGGAVSAGSPHRVAGEVHVIIGPMFAGKTTALLRRIKAESSSGRNVV 60

Query: 61  MIKSSKDTRYAIDSVVTHDGVKFPCWALPDLSSFRQKFGEDAYSKIDVIGVDEAQFFDDL 120
           MIKSSKDTRYAIDSVVTHDG KFPCWALPDLSSFRQKFGEDAY+K+DVIGVDEAQFFDDL
Sbjct: 61  MIKSSKDTRYAIDSVVTHDGAKFPCWALPDLSSFRQKFGEDAYNKLDVIGVDEAQFFDDL 120

Query: 121 YDFCCNVADKDGKIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTL 180
           YDFCC+VADKD KIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTL
Sbjct: 121 YDFCCDVADKDDKIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTL 180

Query: 181 RKTEETRTELIAGADVYMPVCRQHYANGQEVIQSSKNVLGSRTIRTGSNLEALPSLI 238
           RKTEETRTELIAGADVYMPVCR HYANGQEVIQSSKN+LGSR +RTGSNLEALPSLI
Sbjct: 181 RKTEETRTELIAGADVYMPVCRHHYANGQEVIQSSKNILGSRALRTGSNLEALPSLI 237

[Close]

BLAST of Tan0007154 vs. NCBI nr
Match: XP_022943895.1 (thymidine kinase a [Cucurbita moschata])

HSP 1 Score: 443.4 bits (1139), Expect = 1.3e-120
Identity = 218/237 (91.98%), Postives = 226/237 (95.36%), Query Frame = 0


Query: 1   MEALRNSFWLTSADGGTVRAGSSHRVAGEVHVIIGPMFAGKTTELLRRIKSESNSGRNVV 60
           ME+LRNSF L S DGG V AGS HRVAGEVHVIIGPMFAGKTT LLRRIK+ES+SGRNVV
Sbjct: 1   MESLRNSFSLISTDGGAVSAGSPHRVAGEVHVIIGPMFAGKTTALLRRIKAESSSGRNVV 60

Query: 61  MIKSSKDTRYAIDSVVTHDGVKFPCWALPDLSSFRQKFGEDAYSKIDVIGVDEAQFFDDL 120
           MIKSSKDTRYAIDSVVTHDG KFPCWALPDLSSFRQKFGEDAY+K+DVIGVDEAQFFDDL
Sbjct: 61  MIKSSKDTRYAIDSVVTHDGAKFPCWALPDLSSFRQKFGEDAYNKLDVIGVDEAQFFDDL 120

Query: 121 YDFCCNVADKDGKIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTL 180
           YDFCC+VADKD KIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTL
Sbjct: 121 YDFCCDVADKDSKIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTL 180

Query: 181 RKTEETRTELIAGADVYMPVCRQHYANGQEVIQSSKNVLGSRTIRTGSNLEALPSLI 238
           RKTEETRTELIAGADVYMPVCR HYANGQEVIQSSKN+LGSR +RTGSNLEALPSLI
Sbjct: 181 RKTEETRTELIAGADVYMPVCRHHYANGQEVIQSSKNILGSRALRTGSNLEALPSLI 237

[Close]

BLAST of Tan0007154 vs. NCBI nr
Match: KAG6570931.1 (Thymidine kinase a, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 442.6 bits (1137), Expect = 2.2e-120
Identity = 217/237 (91.56%), Postives = 225/237 (94.94%), Query Frame = 0


Query: 1   MEALRNSFWLTSADGGTVRAGSSHRVAGEVHVIIGPMFAGKTTELLRRIKSESNSGRNVV 60
           ME+LRNSF  TS DGG V AGS HRVAGEVHVIIGPMFAGKTT LLRRIK+ES+SGRNVV
Sbjct: 1   MESLRNSFSFTSTDGGAVSAGSPHRVAGEVHVIIGPMFAGKTTALLRRIKAESSSGRNVV 60

Query: 61  MIKSSKDTRYAIDSVVTHDGVKFPCWALPDLSSFRQKFGEDAYSKIDVIGVDEAQFFDDL 120
           MIKSSKDTRYAIDSVVTHDG KFPCW LPDLSSFRQKFGEDAY+K+DVIGVDEAQFFDDL
Sbjct: 61  MIKSSKDTRYAIDSVVTHDGAKFPCWTLPDLSSFRQKFGEDAYNKLDVIGVDEAQFFDDL 120

Query: 121 YDFCCNVADKDGKIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTL 180
           YDFCC+VADKDGKIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTL
Sbjct: 121 YDFCCDVADKDGKIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTL 180

Query: 181 RKTEETRTELIAGADVYMPVCRQHYANGQEVIQSSKNVLGSRTIRTGSNLEALPSLI 238
           RKTEETRTELIAGADVYMPVCR HYANGQEVIQSSKN+LGSR +RT SNLEALPSLI
Sbjct: 181 RKTEETRTELIAGADVYMPVCRHHYANGQEVIQSSKNILGSRALRTSSNLEALPSLI 237

[Close]

BLAST of Tan0007154 vs. NCBI nr
Match: XP_038901065.1 (thymidine kinase isoform X1 [Benincasa hispida])

HSP 1 Score: 439.5 bits (1129), Expect = 1.8e-119
Identity = 217/237 (91.56%), Postives = 226/237 (95.36%), Query Frame = 0


Query: 1   MEALRNSFWLTSADGGTVRAGSSHRVAGEVHVIIGPMFAGKTTELLRRIKSESNSGRNVV 60
           ME+ R+SF LTS++   VRA SSH +AGEVHVIIGPMFAGKTT LLRRIKSESNSGRNVV
Sbjct: 1   MESCRSSFSLTSSNDAVVRAESSHCLAGEVHVIIGPMFAGKTTALLRRIKSESNSGRNVV 60

Query: 61  MIKSSKDTRYAIDSVVTHDGVKFPCWALPDLSSFRQKFGEDAYSKIDVIGVDEAQFFDDL 120
           MIKSSKDTRYAIDSVVTHDG KFPCWALPDLSSFRQKFGEDAY+K+DVIGVDEAQFFDDL
Sbjct: 61  MIKSSKDTRYAIDSVVTHDGAKFPCWALPDLSSFRQKFGEDAYNKLDVIGVDEAQFFDDL 120

Query: 121 YDFCCNVADKDGKIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTL 180
           YDFCCNVADKDGKII+VAGLDGDYLRR FGSVLDV+PLADTVTKLTARCELCGKRAFFTL
Sbjct: 121 YDFCCNVADKDGKIIVVAGLDGDYLRRSFGSVLDVIPLADTVTKLTARCELCGKRAFFTL 180

Query: 181 RKTEETRTELIAGADVYMPVCRQHYANGQEVIQSSKNVLGSRTIRTGSNLEALPSLI 238
           RKTEET TELIAGADVYMPVCRQHYANGQEVIQSSKNVLGSRTIRTGSNLEALPSLI
Sbjct: 181 RKTEETETELIAGADVYMPVCRQHYANGQEVIQSSKNVLGSRTIRTGSNLEALPSLI 237

[Close]

BLAST of Tan0007154 vs. ExPASy TrEMBL
Match: A0A6J1FYC7 (Thymidine kinase OS=Cucurbita moschata OX=3662 GN=LOC111448484 PE=3 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 6.2e-121
Identity = 218/237 (91.98%), Postives = 226/237 (95.36%), Query Frame = 0


Query: 1   MEALRNSFWLTSADGGTVRAGSSHRVAGEVHVIIGPMFAGKTTELLRRIKSESNSGRNVV 60
           ME+LRNSF L S DGG V AGS HRVAGEVHVIIGPMFAGKTT LLRRIK+ES+SGRNVV
Sbjct: 1   MESLRNSFSLISTDGGAVSAGSPHRVAGEVHVIIGPMFAGKTTALLRRIKAESSSGRNVV 60

Query: 61  MIKSSKDTRYAIDSVVTHDGVKFPCWALPDLSSFRQKFGEDAYSKIDVIGVDEAQFFDDL 120
           MIKSSKDTRYAIDSVVTHDG KFPCWALPDLSSFRQKFGEDAY+K+DVIGVDEAQFFDDL
Sbjct: 61  MIKSSKDTRYAIDSVVTHDGAKFPCWALPDLSSFRQKFGEDAYNKLDVIGVDEAQFFDDL 120

Query: 121 YDFCCNVADKDGKIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTL 180
           YDFCC+VADKD KIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTL
Sbjct: 121 YDFCCDVADKDSKIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTL 180

Query: 181 RKTEETRTELIAGADVYMPVCRQHYANGQEVIQSSKNVLGSRTIRTGSNLEALPSLI 238
           RKTEETRTELIAGADVYMPVCR HYANGQEVIQSSKN+LGSR +RTGSNLEALPSLI
Sbjct: 181 RKTEETRTELIAGADVYMPVCRHHYANGQEVIQSSKNILGSRALRTGSNLEALPSLI 237

[Close]

BLAST of Tan0007154 vs. ExPASy TrEMBL
Match: A0A6J1JE52 (Thymidine kinase OS=Cucurbita maxima OX=3661 GN=LOC111483705 PE=3 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 8.9e-120
Identity = 217/237 (91.56%), Postives = 226/237 (95.36%), Query Frame = 0


Query: 1   MEALRNSFWLTSADGGTVRAGSSHRVAGEVHVIIGPMFAGKTTELLRRIKSESNSGRNVV 60
           ME+LRNSF   S DGG V AGS HRVAGEVHVIIGPMFAGKTT LLRRIK+ES+SGRNVV
Sbjct: 1   MESLRNSF---STDGGAVSAGSPHRVAGEVHVIIGPMFAGKTTALLRRIKAESSSGRNVV 60

Query: 61  MIKSSKDTRYAIDSVVTHDGVKFPCWALPDLSSFRQKFGEDAYSKIDVIGVDEAQFFDDL 120
           MIKSSKDTRYA+DSVVTHDG KFPCWALPDLSSFRQKFGEDAY+K+DVIGVDEAQFFDDL
Sbjct: 61  MIKSSKDTRYAVDSVVTHDGAKFPCWALPDLSSFRQKFGEDAYNKLDVIGVDEAQFFDDL 120

Query: 121 YDFCCNVADKDGKIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTL 180
           YDFCC+VADKDGKIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTL
Sbjct: 121 YDFCCDVADKDGKIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTL 180

Query: 181 RKTEETRTELIAGADVYMPVCRQHYANGQEVIQSSKNVLGSRTIRTGSNLEALPSLI 238
           RKTEETRTELIAGADVYMPVCR HYANGQEVIQSSKN+LGSR +RTGSNLEALPSLI
Sbjct: 181 RKTEETRTELIAGADVYMPVCRHHYANGQEVIQSSKNILGSRALRTGSNLEALPSLI 234

[Close]

BLAST of Tan0007154 vs. ExPASy TrEMBL
Match: A0A6J1CH59 (Thymidine kinase OS=Momordica charantia OX=3673 GN=LOC111011151 PE=3 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 4.4e-119
Identity = 215/236 (91.10%), Postives = 224/236 (94.92%), Query Frame = 0


Query: 1   MEALRNSFWLTSADGGTVRAGSSHRVAGEVHVIIGPMFAGKTTELLRRIKSESNSGRNVV 60
           M++ R+S  LT+ DGGTVRAGS  RVAGEVHVIIGPMFAGKTT LLRRIKSESNSGRNVV
Sbjct: 1   MDSFRSSLSLTTTDGGTVRAGSYPRVAGEVHVIIGPMFAGKTTALLRRIKSESNSGRNVV 60

Query: 61  MIKSSKDTRYAIDSVVTHDGVKFPCWALPDLSSFRQKFGEDAYSKIDVIGVDEAQFFDDL 120
           MIKSSKDTRYAIDSVVTHDG KFPCWALPDLSSFRQKFGEDAY K+DVIGVDEAQFFDDL
Sbjct: 61  MIKSSKDTRYAIDSVVTHDGAKFPCWALPDLSSFRQKFGEDAYDKLDVIGVDEAQFFDDL 120

Query: 121 YDFCCNVADKDGKIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTL 180
           YDFCCNVADKDGKI+IVAGLDGDYLRR FGSVLDVVPLADTVTKLTARCELCGKRAFFTL
Sbjct: 121 YDFCCNVADKDGKIVIVAGLDGDYLRRSFGSVLDVVPLADTVTKLTARCELCGKRAFFTL 180

Query: 181 RKTEETRTELIAGADVYMPVCRQHYANGQEVIQSSKNVLGSRTIRTGSNLEALPSL 237
           RKTEETRTELIAGADVYMPVCRQHYANGQ+VIQ+SKNVLGSRT+ TGSNLEAL SL
Sbjct: 181 RKTEETRTELIAGADVYMPVCRQHYANGQQVIQASKNVLGSRTVTTGSNLEALASL 236

[Close]

BLAST of Tan0007154 vs. ExPASy TrEMBL
Match: A0A5D3CJB6 (Thymidine kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G00640 PE=3 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 6.8e-112
Identity = 204/237 (86.08%), Postives = 218/237 (91.98%), Query Frame = 0


Query: 1   MEALRNSFWLTSADGGTVRAGSSHRVAGEVHVIIGPMFAGKTTELLRRIKSESNSGRNVV 60
           ME+ R+S  LTS++   +R  SSHR+ GEVHVIIGPMFAGKTT LLRRIKS SNSGRNVV
Sbjct: 1   MESCRSSLSLTSSNADAIRPESSHRLTGEVHVIIGPMFAGKTTALLRRIKSASNSGRNVV 60

Query: 61  MIKSSKDTRYAIDSVVTHDGVKFPCWALPDLSSFRQKFGEDAYSKIDVIGVDEAQFFDDL 120
           MIKSSKDTRYA+DSVVTHDG KFPCWALP LSSFRQKFGEDAY+++DVIGVDEAQFFDDL
Sbjct: 61  MIKSSKDTRYAVDSVVTHDGAKFPCWALPHLSSFRQKFGEDAYNELDVIGVDEAQFFDDL 120

Query: 121 YDFCCNVADKDGKIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTL 180
           YDFCCNVAD+DGKII+VAGLDGDYLRR FGSVLDVVPLADTVTKLTARCELCGKRAFFTL
Sbjct: 121 YDFCCNVADRDGKIIVVAGLDGDYLRRSFGSVLDVVPLADTVTKLTARCELCGKRAFFTL 180

Query: 181 RKTEETRTELIAGADVYMPVCRQHYANGQEVIQSSKNVLGSRTIRTGSNLEALPSLI 238
           RKTEET+TELIAGADVYMPVCR HYA GQEVIQSSKNV+GSRTI   SNLEALPSLI
Sbjct: 181 RKTEETKTELIAGADVYMPVCRHHYATGQEVIQSSKNVMGSRTI--ASNLEALPSLI 235

[Close]

BLAST of Tan0007154 vs. ExPASy TrEMBL
Match: A0A1S3CKW8 (Thymidine kinase OS=Cucumis melo OX=3656 GN=LOC103502126 PE=3 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 6.8e-112
Identity = 204/237 (86.08%), Postives = 218/237 (91.98%), Query Frame = 0


Query: 1   MEALRNSFWLTSADGGTVRAGSSHRVAGEVHVIIGPMFAGKTTELLRRIKSESNSGRNVV 60
           ME+ R+S  LTS++   +R  SSHR+ GEVHVIIGPMFAGKTT LLRRIKS SNSGRNVV
Sbjct: 1   MESCRSSLSLTSSNADAIRPESSHRLTGEVHVIIGPMFAGKTTALLRRIKSASNSGRNVV 60

Query: 61  MIKSSKDTRYAIDSVVTHDGVKFPCWALPDLSSFRQKFGEDAYSKIDVIGVDEAQFFDDL 120
           MIKSSKDTRYA+DSVVTHDG KFPCWALP LSSFRQKFGEDAY+++DVIGVDEAQFFDDL
Sbjct: 61  MIKSSKDTRYAVDSVVTHDGAKFPCWALPHLSSFRQKFGEDAYNELDVIGVDEAQFFDDL 120

Query: 121 YDFCCNVADKDGKIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTL 180
           YDFCCNVAD+DGKII+VAGLDGDYLRR FGSVLDVVPLADTVTKLTARCELCGKRAFFTL
Sbjct: 121 YDFCCNVADRDGKIIVVAGLDGDYLRRSFGSVLDVVPLADTVTKLTARCELCGKRAFFTL 180

Query: 181 RKTEETRTELIAGADVYMPVCRQHYANGQEVIQSSKNVLGSRTIRTGSNLEALPSLI 238
           RKTEET+TELIAGADVYMPVCR HYA GQEVIQSSKNV+GSRTI   SNLEALPSLI
Sbjct: 181 RKTEETKTELIAGADVYMPVCRHHYATGQEVIQSSKNVMGSRTI--ASNLEALPSLI 235

[Close]

BLAST of Tan0007154 vs. TAIR 10
Match: AT3G07800.1 (Thymidine kinase )

HSP 1 Score: 315.1 bits (806), Expect = 4.9e-86
Identity = 151/222 (68.02%), Postives = 180/222 (81.08%), Query Frame = 0


Query: 1   MEALRNSFWLTSADG---GTVRAGSSHRVAGEVHVIIGPMFAGKTTELLRRIKSESNSGR 60
           M  L+ SF + + D    G   +    R +G VHVI+GPMF+GK+T LLRRIKSE + GR
Sbjct: 1   MATLKASFLIKTLDSDVTGDFLSDLERRGSGAVHVIMGPMFSGKSTSLLRRIKSEISDGR 60

Query: 61  NVVMIKSSKDTRYAIDSVVTHDGVKFPCWALPDLSSFRQKFGEDAYSKIDVIGVDEAQFF 120
           +V M+KSSKDTRYA DSVVTHDG+ FPCWALPDL SF +KFG DAY+K+DVIG+DEAQFF
Sbjct: 61  SVAMLKSSKDTRYAKDSVVTHDGIGFPCWALPDLMSFPEKFGLDAYNKLDVIGIDEAQFF 120

Query: 121 DDLYDFCCNVADKDGKIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAF 180
            DLY+FCC VAD DGKI+IVAGLDGDYLRR FG+VLD++P+AD+VTKLTARCE+CG +AF
Sbjct: 121 GDLYEFCCKVADDDGKIVIVAGLDGDYLRRSFGAVLDIIPIADSVTKLTARCEVCGHKAF 180

Query: 181 FTLRKTEETRTELIAGADVYMPVCRQHYANGQEVIQSSKNVL 220
           FTLRK  +TRTELI GADVYMPVCR+HY     VI++SK VL
Sbjct: 181 FTLRKNCDTRTELIGGADVYMPVCRKHYITNHIVIKASKKVL 222

[Close]

BLAST of Tan0007154 vs. TAIR 10
Match: AT5G23070.1 (Thymidine kinase )

HSP 1 Score: 292.7 bits (748), Expect = 2.6e-79
Identity = 130/195 (66.67%), Postives = 168/195 (86.15%), Query Frame = 0


Query: 28  GEVHVIIGPMFAGKTTELLRRIKSESNSGRNVVMIKSSKDTRYAIDSVVTHDGVKFPCWA 87
           GE+HV++GPMF+GKTT LLRRI +E  +G+ + +IKS+KDTRY  +S+VTHDG K+PCW+
Sbjct: 77  GEIHVVVGPMFSGKTTTLLRRILAERETGKRIAIIKSNKDTRYCTESIVTHDGEKYPCWS 136

Query: 88  LPDLSSFRQKFGEDAY-SKIDVIGVDEAQFFDDLYDFCCNVADKDGKIIIVAGLDGDYLR 147
           LPDLSSF+++FG D Y +++DVIG+DEAQFF DLY+FC   ADK+GK +IVAGLDGD++R
Sbjct: 137 LPDLSSFKERFGFDDYENRLDVIGIDEAQFFGDLYEFCREAADKEGKTVIVAGLDGDFMR 196

Query: 148 RRFGSVLDVVPLADTVTKLTARCELCGKRAFFTLRKTEETRTELIAGADVYMPVCRQHYA 207
           RRFGSVLD++P+ADTVTKLT+RCE+CGKRA FT+RKTEE  TELI GA+VYMPVCR HY 
Sbjct: 197 RRFGSVLDLIPIADTVTKLTSRCEVCGKRALFTMRKTEEKETELIGGAEVYMPVCRSHYV 256

Query: 208 NGQEVIQSSKNVLGS 222
            GQ V+++++ VL S
Sbjct: 257 CGQNVLETARAVLDS 271

The following BLAST results are available for this feature:

BLAST of Tan0007154 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S750	6.9e-85	68.02	Thymidine kinase a OS=Arabidopsis thaliana OX=3702 GN=TK1A PE=1 SV=1	[more]
O81263	2.0e-84	69.38	Thymidine kinase OS=Oryza sativa subsp. japonica OX=39947 GN=TK PE=2 SV=2	[more]
F4KBF5	3.6e-78	66.67	Thymidine kinase b OS=Arabidopsis thaliana OX=3702 GN=TK1B PE=1 SV=1	[more]
P23335	2.6e-36	42.70	Thymidine kinase OS=Swinepox virus (strain Kasza) OX=10277 GN=TK PE=3 SV=1	[more]
Q27564	3.8e-35	42.92	Thymidine kinase 1 OS=Dictyostelium discoideum OX=44689 GN=thyB PE=1 SV=1	[more]

BLAST of Tan0007154 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023513380.1	5.2e-122	92.83	thymidine kinase a [Cucurbita pepo subsp. pepo]	[more]
KAG7010772.1	3.3e-121	92.41	Thymidine kinase a [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022943895.1	1.3e-120	91.98	thymidine kinase a [Cucurbita moschata]	[more]
KAG6570931.1	2.2e-120	91.56	Thymidine kinase a, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038901065.1	1.8e-119	91.56	thymidine kinase isoform X1 [Benincasa hispida]	[more]

BLAST of Tan0007154 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FYC7	6.2e-121	91.98	Thymidine kinase OS=Cucurbita moschata OX=3662 GN=LOC111448484 PE=3 SV=1	[more]
A0A6J1JE52	8.9e-120	91.56	Thymidine kinase OS=Cucurbita maxima OX=3661 GN=LOC111483705 PE=3 SV=1	[more]
A0A6J1CH59	4.4e-119	91.10	Thymidine kinase OS=Momordica charantia OX=3673 GN=LOC111011151 PE=3 SV=1	[more]
A0A5D3CJB6	6.8e-112	86.08	Thymidine kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G006...	[more]
A0A1S3CKW8	6.8e-112	86.08	Thymidine kinase OS=Cucumis melo OX=3656 GN=LOC103502126 PE=3 SV=1	[more]

BLAST of Tan0007154 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07800.1	4.9e-86	68.02	Thymidine kinase	[more]
AT5G23070.1	2.6e-79	66.67	Thymidine kinase	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 237..237
None	No IPR available	GENE3D	3.30.60.20		coord: 166..207 e-value: 1.3E-15 score: 59.4
None	No IPR available	PANTHER	PTHR11441:SF8	THYMIDINE KINASE B	coord: 18..227
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 166..208
IPR001267	Thymidine kinase	PFAM	PF00265	TK	coord: 28..205 e-value: 1.1E-53 score: 181.7
IPR001267	Thymidine kinase	PANTHER	PTHR11441	THYMIDINE KINASE	coord: 18..227
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 22..165 e-value: 2.1E-46 score: 159.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 28..166
IPR020633	Thymidine kinase, conserved site	PROSITE	PS00603	TK_CELLULAR_TYPE	coord: 192..205

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0007154.1	Tan0007154.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009157	deoxyribonucleoside monophosphate biosynthetic process
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0016310	phosphorylation
biological_process	GO:0046104	thymidine metabolic process
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004797	thymidine kinase activity