Tan0007140 (gene) Snake gourd v1

Overview


Name	Tan0007140
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	protein SINE3
Location	LG06: 79931158 .. 79932736 (+)
RNA-Seq Expression	Tan0007140
Synteny	Tan0007140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTTTCTTTGTTTCATAAGCTGCAAGATCTCCATTGGCGCCAAAGATCAACTTCAGAACTTCCAAAAATTTTCCCGCGGCATTAAGATGGAGAAAAGGACGAAAGACTTCCAAACTCCGCAGAGAGATCAAGCAGCAAATCGTAGATCAAGGAAACCTCAGAAGGTACGAATATTTCTTTTATTGGTTGTTCTCATCTCTCTCATTCTCCAGTTTGATGTCTTGTTCGTTCTGCTTCAATTAAGATCGCCAAGAGTTTGACTGCCACATTTTCATCACTTTCCGACGATAAAATCCAGCCAATTTCGAAGGATGACTTCTCTCCGATCTCCGTTGTCTCCAACATCAATCAGATTCCAGATATCGACAGCGTAAGTTCCGATTCTCTGTAATTTTTCGACGATCGGTTCGATTTAACTTTTCATCTCGTTCTTTTGCTTTGTGTCTTCATGCTGTTGATCTCAATTTGTGGAGTATTCCTAATGAGAAGAAGATTTGTTATCTATTATTTGCTCAAGTCATATTCGCTTTACTTTTTTCCTCCGCTTATAATCTACTGAGACCGGAGATTAACTTGATGTATTTAACGTATGGTCAAGCGACGAAATGAAGTATATGAGAGATTGTGACACTGGAATTTGATAGATTTGAAAATTTGCTAGTGTTCTAAGTTAGTTTTCTCTATTTCAGAGTTTCTTGCAGGGTGTTAGTCCGGCTCTTTCTACATCCTGCGAGAGCTTGCTTTTCCCCGATCTTTCTCCATCTTCAGTTGTTACTTTTGACAATGAACAGCTTGACAAGGTTCCAGTTAATTTTGATGTATCTAATGATTTAGACGAAGCAAGCGCGGGTTCAGTAGAGGCAGAGATTGCCGTCAATTCTTTAAGGCGTGCTCTAACTCAAGTCCTGCAATCAACGGATGTTGATCATCAGTCTAAGAAGCTTATAGATGCATCCATGAGGATCATTGTGGACGACTTCCTCGCTATACCTCAAGAGCGAGACCAGATTGCTCAACTTATTTCTGCCAAAAGTCATGTTCTATCTCTAGGTTTATTCCTGTGGATCATCGTCTTGGCTTTAGCTTTCTTTTTCGGTTCGGGAGTCAAGAATTCTTTCATTGGTCCACTGCCAACTTAACTTGCGAAGAAATTCCTTGTTCTAGCATCAGAGGTTAGATCTTAATTGATTTTGTCGTAACAGGTATATATGCCCTCTTATACTTGATTGTTGATACCTTTGAATTGGACCTTTCATCTTCTTACGTAAGAAACCTGCTGAACCGTGAAATTTTGTTGTCAAAAGTTAACAGTACATTAGCCTCACGGTTGTACTATGATTTAACACTATTTGACATCTTCATAAACCTGTGGGGGATCATATGATCTTGATCTTTTTGTAATCCTTTACGCGTTATATTAGCTGCTTATTAGTCAGTCTTCACTTTCTTATTCGATTGATAATCGAATGTTTAATGTTTGTTTTCATTTCCAAAAGATATATTCTGCCTAAAGAAACCAGAGCAGTTTGTTTTGAATTCGAAACTATAATGACGTGACTTAGGGAAGATTCAAACTAC

mRNA sequence

TATTTTCTTTGTTTCATAAGCTGCAAGATCTCCATTGGCGCCAAAGATCAACTTCAGAACTTCCAAAAATTTTCCCGCGGCATTAAGATGGAGAAAAGGACGAAAGACTTCCAAACTCCGCAGAGAGATCAAGCAGCAAATCGTAGATCAAGGAAACCTCAGAAGATCGCCAAGAGTTTGACTGCCACATTTTCATCACTTTCCGACGATAAAATCCAGCCAATTTCGAAGGATGACTTCTCTCCGATCTCCGTTGTCTCCAACATCAATCAGATTCCAGATATCGACAGCAGTTTCTTGCAGGGTGTTAGTCCGGCTCTTTCTACATCCTGCGAGAGCTTGCTTTTCCCCGATCTTTCTCCATCTTCAGTTGTTACTTTTGACAATGAACAGCTTGACAAGGTTCCAGTTAATTTTGATGTATCTAATGATTTAGACGAAGCAAGCGCGGGTTCAGTAGAGGCAGAGATTGCCGTCAATTCTTTAAGGCGTGCTCTAACTCAAGTCCTGCAATCAACGGATGTTGATCATCAGTCTAAGAAGCTTATAGATGCATCCATGAGGATCATTGTGGACGACTTCCTCGCTATACCTCAAGAGCGAGACCAGATTGCTCAACTTATTTCTGCCAAAAGTCATGTTCTATCTCTAGGTTTATTCCTGTGGATCATCGTCTTGGCTTTAGCTTTCTTTTTCGGTTCGGGAGTCAAGAATTCTTTCATTGGTCCACTGCCAACTTAACTTGCGAAGAAATTCCTTGTTCTAGCATCAGAGGTTAGATCTTAATTGATTTTGTCGTAACAGGTATATATGCCCTCTTATACTTGATTGTTGATACCTTTGAATTGGACCTTTCATCTTCTTACGTAAGAAACCTGCTGAACCGTGAAATTTTGTTGTCAAAAGTTAACAGTACATTAGCCTCACGGTTGTACTATGATTTAACACTATTTGACATCTTCATAAACCTGTGGGGGATCATATGATCTTGATCTTTTTGTAATCCTTTACGCGTTATATTAGCTGCTTATTAGTCAGTCTTCACTTTCTTATTCGATTGATAATCGAATGTTTAATGTTTGTTTTCATTTCCAAAAGATATATTCTGCCTAAAGAAACCAGAGCAGTTTGTTTTGAATTCGAAACTATAATGACGTGACTTAGGGAAGATTCAAACTAC

Coding sequence (CDS)

ATGGAGAAAAGGACGAAAGACTTCCAAACTCCGCAGAGAGATCAAGCAGCAAATCGTAGATCAAGGAAACCTCAGAAGATCGCCAAGAGTTTGACTGCCACATTTTCATCACTTTCCGACGATAAAATCCAGCCAATTTCGAAGGATGACTTCTCTCCGATCTCCGTTGTCTCCAACATCAATCAGATTCCAGATATCGACAGCAGTTTCTTGCAGGGTGTTAGTCCGGCTCTTTCTACATCCTGCGAGAGCTTGCTTTTCCCCGATCTTTCTCCATCTTCAGTTGTTACTTTTGACAATGAACAGCTTGACAAGGTTCCAGTTAATTTTGATGTATCTAATGATTTAGACGAAGCAAGCGCGGGTTCAGTAGAGGCAGAGATTGCCGTCAATTCTTTAAGGCGTGCTCTAACTCAAGTCCTGCAATCAACGGATGTTGATCATCAGTCTAAGAAGCTTATAGATGCATCCATGAGGATCATTGTGGACGACTTCCTCGCTATACCTCAAGAGCGAGACCAGATTGCTCAACTTATTTCTGCCAAAAGTCATGTTCTATCTCTAGGTTTATTCCTGTGGATCATCGTCTTGGCTTTAGCTTTCTTTTTCGGTTCGGGAGTCAAGAATTCTTTCATTGGTCCACTGCCAACTTAA

Protein sequence

MEKRTKDFQTPQRDQAANRRSRKPQKIAKSLTATFSSLSDDKIQPISKDDFSPISVVSNINQIPDIDSSFLQGVSPALSTSCESLLFPDLSPSSVVTFDNEQLDKVPVNFDVSNDLDEASAGSVEAEIAVNSLRRALTQVLQSTDVDHQSKKLIDASMRIIVDDFLAIPQERDQIAQLISAKSHVLSLGLFLWIIVLALAFFFGSGVKNSFIGPLPT

Homology

[Close]

BLAST of Tan0007140 vs. ExPASy Swiss-Prot
Match: Q9C900 (Protein SINE3 OS=Arabidopsis thaliana OX=3702 GN=SINE3 PE=1 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 9.3e-04
Identity = 65/226 (28.76%), Postives = 106/226 (46.90%), Query Frame = 0


Query: 6   KDFQTPQRDQAAN-----RRSRKPQKIAKSLT------ATFSSLSDDKIQPISKD--DFS 65
           K+ Q P++  A +     +R + P+   + +T      ATFS +S +     +KD  DFS
Sbjct: 2   KEIQIPRKSFARSSELGAKRLKDPEMKNRKVTTEKRQIATFSDVSFES----TKDPMDFS 61

Query: 66  PISVVSNINQIPDIDS-SFLQGVSPALSTSCESLLFPDLSPSSVVTFDNEQLDKVPVNFD 125
           PIS +S    I D ++ S +QG S  L ++ E  L  D SP S +T        V    D
Sbjct: 62  PISQIS--GAISDSEAESVIQGSSLDLMSTPEICLPADDSPVSTIT-------SVEARID 121

Query: 126 VSNDLDEASAGSVEAEIAVNSLRRALTQVLQSTDVDHQSKKLIDASMRIIVDDFLAIPQE 185
            S+   +     V+   +V SLR  + ++          KKLI +     VD+      E
Sbjct: 122 TSS--TDRIQSIVDLPASVQSLRGEINEL----------KKLICS-----VDN----SAE 181

Query: 186 RDQIAQLISAKSHVLSLGLFLWIIVLALAFFFGSGVKNSFIGPLPT 218
            + + ++++ K  ++ L   LW I+ A+  FF SG + ++ GPLPT
Sbjct: 182 INWVDRVVTVKFRIVLLSFILWAILAAIVVFFSSGEERAYRGPLPT 193

[Close]

BLAST of Tan0007140 vs. NCBI nr
Match: XP_038876305.1 (uncharacterized protein LOC120068561 [Benincasa hispida])

HSP 1 Score: 352.8 bits (904), Expect = 2.1e-93
Identity = 188/217 (86.64%), Postives = 203/217 (93.55%), Query Frame = 0


Query: 1   MEKRTKDFQTPQRDQAANRRSRKPQKIAKSLTATFSSLSDDKIQPISKDDFSPISVVSNI 60
           MEK+ KD+QTPQRDQ ANRRSRKPQKIAK LTATFSSLSDDKIQPISK+DFSPISVV++I
Sbjct: 1   MEKKMKDYQTPQRDQTANRRSRKPQKIAKCLTATFSSLSDDKIQPISKEDFSPISVVTDI 60

Query: 61  NQIPDIDSSFLQGVSPALSTSCESLLFPDLSPSSVVTFDNEQLDKVPVNFDVSNDLDEAS 120
           NQIPDIDS+FLQGV+PA S SCE+ LF DLSPSSVV+FDNEQLDKVPVNF  SND+DEAS
Sbjct: 61  NQIPDIDSNFLQGVNPAFSASCETSLFADLSPSSVVSFDNEQLDKVPVNFSGSNDMDEAS 120

Query: 121 AGSVEAEIAVNSLRRALTQVLQSTDVDHQSKKLIDASMRIIVDDFLAIPQERDQIAQLIS 180
           AGSVE +IAVNSLRRALTQVLQSTDVDHQSKKLIDASM IIVDDFLAIPQERDQIAQLIS
Sbjct: 121 AGSVEVQIAVNSLRRALTQVLQSTDVDHQSKKLIDASMSIIVDDFLAIPQERDQIAQLIS 180

Query: 181 AKSHVLSLGLFLWIIVLALAFFFGSGVKNSFIGPLPT 218
            K+HVLSL +FLWIIVLA+AFF GSGVK+SFIGPLPT
Sbjct: 181 VKNHVLSLCVFLWIIVLAIAFFLGSGVKSSFIGPLPT 217

[Close]

BLAST of Tan0007140 vs. NCBI nr
Match: XP_022999957.1 (uncharacterized protein LOC111494286 [Cucurbita maxima] >XP_022999958.1 uncharacterized protein LOC111494286 [Cucurbita maxima] >XP_022999959.1 uncharacterized protein LOC111494286 [Cucurbita maxima])

HSP 1 Score: 343.2 bits (879), Expect = 1.6e-90
Identity = 186/217 (85.71%), Postives = 199/217 (91.71%), Query Frame = 0


Query: 1   MEKRTKDFQTPQRDQAANRRSRKPQKIAKSLTATFSSLSDDKIQPISKDDFSPISVVSNI 60
           MEKRTK++QTP RDQAANRRS+KP KI KSLTATFSS  DDKIQPI K+DFSPISVVSNI
Sbjct: 1   MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPILKEDFSPISVVSNI 60

Query: 61  NQIPDIDSSFLQGVSPALSTSCESLLFPDLSPSSVVTFDNEQLDKVPVNFDVSNDLDEAS 120
           +QIPDIDSSFLQ V+PALS SCES LFP+LSPSSVVTFDN+QLDKVPVNF  SN+LDEAS
Sbjct: 61  SQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDNKQLDKVPVNFGESNNLDEAS 120

Query: 121 AGSVEAEIAVNSLRRALTQVLQSTDVDHQSKKLIDASMRIIVDDFLAIPQERDQIAQLIS 180
           AGSVEAEIAVN LRRAL QVLQSTDVDHQSKKLIDAS+RIIVDDFLAIPQERD I +LIS
Sbjct: 121 AGSVEAEIAVNYLRRALIQVLQSTDVDHQSKKLIDASVRIIVDDFLAIPQERDLITRLIS 180

Query: 181 AKSHVLSLGLFLWIIVLALAFFFGSGVKNSFIGPLPT 218
           +KSHVLSLGLFLWIIVL LAFF GSGV+N FIGPLPT
Sbjct: 181 SKSHVLSLGLFLWIIVLVLAFFSGSGVENCFIGPLPT 217

[Close]

BLAST of Tan0007140 vs. NCBI nr
Match: KAG6594019.1 (hypothetical protein SDJN03_13495, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026359.1 hypothetical protein SDJN02_12861, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 342.8 bits (878), Expect = 2.1e-90
Identity = 185/217 (85.25%), Postives = 200/217 (92.17%), Query Frame = 0


Query: 1   MEKRTKDFQTPQRDQAANRRSRKPQKIAKSLTATFSSLSDDKIQPISKDDFSPISVVSNI 60
           MEKRTK++QTP RDQAANRRS+KP KI KSLTATFSS  DDKIQPISK+DFSPISVVSNI
Sbjct: 1   MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPISKEDFSPISVVSNI 60

Query: 61  NQIPDIDSSFLQGVSPALSTSCESLLFPDLSPSSVVTFDNEQLDKVPVNFDVSNDLDEAS 120
           +QIPDIDSSFLQ V+PALS SCES LFP+LSPSSVVTFDN+QLDKVPVNF  SN+LDEAS
Sbjct: 61  SQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDNKQLDKVPVNFGGSNNLDEAS 120

Query: 121 AGSVEAEIAVNSLRRALTQVLQSTDVDHQSKKLIDASMRIIVDDFLAIPQERDQIAQLIS 180
           AGSVEAEIAVN LRRAL+QVLQSTDVDHQSKKLIDAS+RIIVD+FLAIPQERD I +LIS
Sbjct: 121 AGSVEAEIAVNYLRRALSQVLQSTDVDHQSKKLIDASVRIIVDEFLAIPQERDLITRLIS 180

Query: 181 AKSHVLSLGLFLWIIVLALAFFFGSGVKNSFIGPLPT 218
           +KSHVLSLGLFLWIIVL  AFF GSGV+N FIGPLPT
Sbjct: 181 SKSHVLSLGLFLWIIVLVFAFFSGSGVENCFIGPLPT 217

[Close]

BLAST of Tan0007140 vs. NCBI nr
Match: XP_022930352.1 (uncharacterized protein LOC111436822 [Cucurbita moschata])

HSP 1 Score: 342.0 bits (876), Expect = 3.7e-90
Identity = 185/217 (85.25%), Postives = 200/217 (92.17%), Query Frame = 0


Query: 1   MEKRTKDFQTPQRDQAANRRSRKPQKIAKSLTATFSSLSDDKIQPISKDDFSPISVVSNI 60
           MEKRTK++QTP RDQAANRRS+KP KI KSLTATFSS  DDKIQPI K+DFSPISVVSNI
Sbjct: 1   MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPILKEDFSPISVVSNI 60

Query: 61  NQIPDIDSSFLQGVSPALSTSCESLLFPDLSPSSVVTFDNEQLDKVPVNFDVSNDLDEAS 120
           +QIPDIDSSFLQ V+PALS SCES LFP+LSPSSVVTFDN+QLDKVPVNF  SN+LDEAS
Sbjct: 61  SQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDNKQLDKVPVNFGGSNNLDEAS 120

Query: 121 AGSVEAEIAVNSLRRALTQVLQSTDVDHQSKKLIDASMRIIVDDFLAIPQERDQIAQLIS 180
           AGSVEAEIAVN LRRAL+QVLQSTDVDHQSKKLIDAS+RIIVD+FLAIPQERD I +LIS
Sbjct: 121 AGSVEAEIAVNYLRRALSQVLQSTDVDHQSKKLIDASVRIIVDEFLAIPQERDLITRLIS 180

Query: 181 AKSHVLSLGLFLWIIVLALAFFFGSGVKNSFIGPLPT 218
           +KSHVLSLGLFLWIIVL LAFF GSGV+N FIGPLPT
Sbjct: 181 SKSHVLSLGLFLWIIVLVLAFFSGSGVENCFIGPLPT 217

[Close]

BLAST of Tan0007140 vs. NCBI nr
Match: XP_023514806.1 (uncharacterized protein LOC111779010 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 335.5 bits (859), Expect = 3.4e-88
Identity = 182/217 (83.87%), Postives = 196/217 (90.32%), Query Frame = 0


Query: 1   MEKRTKDFQTPQRDQAANRRSRKPQKIAKSLTATFSSLSDDKIQPISKDDFSPISVVSNI 60
           MEKRTK++QTP RDQAANRRS+KP KI KSLTATFSS  DDKIQPI K+DFSPISVV NI
Sbjct: 1   MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPILKEDFSPISVVPNI 60

Query: 61  NQIPDIDSSFLQGVSPALSTSCESLLFPDLSPSSVVTFDNEQLDKVPVNFDVSNDLDEAS 120
           NQIPDID+SFLQ V+PALS SCES LFP+L PSSVVTFDN+QLDKVPVNF  SN+LDEAS
Sbjct: 61  NQIPDIDTSFLQDVNPALSVSCESSLFPELFPSSVVTFDNKQLDKVPVNFGGSNNLDEAS 120

Query: 121 AGSVEAEIAVNSLRRALTQVLQSTDVDHQSKKLIDASMRIIVDDFLAIPQERDQIAQLIS 180
           AGSVEAEIAVN LRRAL QVLQSTDVDHQSKKLIDAS+RIIVD+FLAIPQERD I +LIS
Sbjct: 121 AGSVEAEIAVNYLRRALIQVLQSTDVDHQSKKLIDASVRIIVDEFLAIPQERDLITRLIS 180

Query: 181 AKSHVLSLGLFLWIIVLALAFFFGSGVKNSFIGPLPT 218
           +KSHVLSLGLFLWIIVL LAFF G GV+N FIGPLPT
Sbjct: 181 SKSHVLSLGLFLWIIVLVLAFFSGLGVENCFIGPLPT 217

[Close]

BLAST of Tan0007140 vs. ExPASy TrEMBL
Match: A0A6J1KL67 (uncharacterized protein LOC111494286 OS=Cucurbita maxima OX=3661 GN=LOC111494286 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 7.9e-91
Identity = 186/217 (85.71%), Postives = 199/217 (91.71%), Query Frame = 0


Query: 1   MEKRTKDFQTPQRDQAANRRSRKPQKIAKSLTATFSSLSDDKIQPISKDDFSPISVVSNI 60
           MEKRTK++QTP RDQAANRRS+KP KI KSLTATFSS  DDKIQPI K+DFSPISVVSNI
Sbjct: 1   MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPILKEDFSPISVVSNI 60

Query: 61  NQIPDIDSSFLQGVSPALSTSCESLLFPDLSPSSVVTFDNEQLDKVPVNFDVSNDLDEAS 120
           +QIPDIDSSFLQ V+PALS SCES LFP+LSPSSVVTFDN+QLDKVPVNF  SN+LDEAS
Sbjct: 61  SQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDNKQLDKVPVNFGESNNLDEAS 120

Query: 121 AGSVEAEIAVNSLRRALTQVLQSTDVDHQSKKLIDASMRIIVDDFLAIPQERDQIAQLIS 180
           AGSVEAEIAVN LRRAL QVLQSTDVDHQSKKLIDAS+RIIVDDFLAIPQERD I +LIS
Sbjct: 121 AGSVEAEIAVNYLRRALIQVLQSTDVDHQSKKLIDASVRIIVDDFLAIPQERDLITRLIS 180

Query: 181 AKSHVLSLGLFLWIIVLALAFFFGSGVKNSFIGPLPT 218
           +KSHVLSLGLFLWIIVL LAFF GSGV+N FIGPLPT
Sbjct: 181 SKSHVLSLGLFLWIIVLVLAFFSGSGVENCFIGPLPT 217

[Close]

BLAST of Tan0007140 vs. ExPASy TrEMBL
Match: A0A6J1EQ83 (uncharacterized protein LOC111436822 OS=Cucurbita moschata OX=3662 GN=LOC111436822 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.8e-90
Identity = 185/217 (85.25%), Postives = 200/217 (92.17%), Query Frame = 0


Query: 1   MEKRTKDFQTPQRDQAANRRSRKPQKIAKSLTATFSSLSDDKIQPISKDDFSPISVVSNI 60
           MEKRTK++QTP RDQAANRRS+KP KI KSLTATFSS  DDKIQPI K+DFSPISVVSNI
Sbjct: 1   MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPILKEDFSPISVVSNI 60

Query: 61  NQIPDIDSSFLQGVSPALSTSCESLLFPDLSPSSVVTFDNEQLDKVPVNFDVSNDLDEAS 120
           +QIPDIDSSFLQ V+PALS SCES LFP+LSPSSVVTFDN+QLDKVPVNF  SN+LDEAS
Sbjct: 61  SQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDNKQLDKVPVNFGGSNNLDEAS 120

Query: 121 AGSVEAEIAVNSLRRALTQVLQSTDVDHQSKKLIDASMRIIVDDFLAIPQERDQIAQLIS 180
           AGSVEAEIAVN LRRAL+QVLQSTDVDHQSKKLIDAS+RIIVD+FLAIPQERD I +LIS
Sbjct: 121 AGSVEAEIAVNYLRRALSQVLQSTDVDHQSKKLIDASVRIIVDEFLAIPQERDLITRLIS 180

Query: 181 AKSHVLSLGLFLWIIVLALAFFFGSGVKNSFIGPLPT 218
           +KSHVLSLGLFLWIIVL LAFF GSGV+N FIGPLPT
Sbjct: 181 SKSHVLSLGLFLWIIVLVLAFFSGSGVENCFIGPLPT 217

[Close]

BLAST of Tan0007140 vs. ExPASy TrEMBL
Match: A0A6J1H5Y6 (uncharacterized protein LOC111460327 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460327 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 3.6e-83
Identity = 176/217 (81.11%), Postives = 188/217 (86.64%), Query Frame = 0


Query: 1   MEKRTKDFQTPQRDQAANRRSRKPQKIAKSLTATFSSLSDDKIQPISKDDFSPISVVSNI 60
           ME+R KD QTPQRDQAANRRSRKP KIAK LTATFSSLSDDKIQ  SK DFS ISVVS++
Sbjct: 1   MERRMKDSQTPQRDQAANRRSRKPLKIAKCLTATFSSLSDDKIQRSSKQDFSSISVVSDV 60

Query: 61  NQIPDIDSSFLQGVSPALSTSCESLLFPDLSPSSVVTFDNEQLDKVPVNFDVSNDLDEAS 120
           NQIPDID SFL  V+PALS  C S L PDLSPSSVVTFDN QLDKVPVNF  SNDLDE  
Sbjct: 61  NQIPDIDRSFLHDVNPALSACCGSSLIPDLSPSSVVTFDNGQLDKVPVNFSGSNDLDETG 120

Query: 121 AGSVEAEIAVNSLRRALTQVLQSTDVDHQSKKLIDASMRIIVDDFLAIPQERDQIAQLIS 180
           AGSV AEIAV+SL RALTQVLQSTDVDHQ+KKLIDAS+RIIVDDFLAIPQ+RD I Q+IS
Sbjct: 121 AGSVGAEIAVSSLSRALTQVLQSTDVDHQAKKLIDASIRIIVDDFLAIPQDRDHIFQIIS 180

Query: 181 AKSHVLSLGLFLWIIVLALAFFFGSGVKNSFIGPLPT 218
           AK+ VLS+ LFLWIIVLALAFFF S VK+SFIGPLPT
Sbjct: 181 AKNQVLSISLFLWIIVLALAFFFNSEVKSSFIGPLPT 217

[Close]

BLAST of Tan0007140 vs. ExPASy TrEMBL
Match: A0A1S4E1Y8 (uncharacterized protein LOC103497781 OS=Cucumis melo OX=3656 GN=LOC103497781 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 4.7e-83
Identity = 171/217 (78.80%), Postives = 194/217 (89.40%), Query Frame = 0


Query: 1   MEKRTKDFQTPQRDQAANRRSRKPQKIAKSLTATFSSLSDDKIQPISKDDFSPISVVSNI 60
           MEKR KD QTPQR+Q  NRRSRKPQKIAK LTA+FSSLS+DKI  ISK++ SPISVVS++
Sbjct: 1   MEKRMKDHQTPQREQTTNRRSRKPQKIAKCLTASFSSLSEDKIHSISKENSSPISVVSDV 60

Query: 61  NQIPDIDSSFLQGVSPALSTSCESLLFPDLSPSSVVTFDNEQLDKVPVNFDVSNDLDEAS 120
           NQI DIDSSFLQGV+P  S  C++ LFPDLSPSSVV+FDNE LDKV V+F  SND++EAS
Sbjct: 61  NQISDIDSSFLQGVNPEFSACCDTSLFPDLSPSSVVSFDNELLDKVSVDFSGSNDMNEAS 120

Query: 121 AGSVEAEIAVNSLRRALTQVLQSTDVDHQSKKLIDASMRIIVDDFLAIPQERDQIAQLIS 180
           AGS+EAEIAVNSLRRALTQVL STDVDHQSKKLIDASMRIIVDDFLAIPQERD+IAQLIS
Sbjct: 121 AGSLEAEIAVNSLRRALTQVLLSTDVDHQSKKLIDASMRIIVDDFLAIPQERDRIAQLIS 180

Query: 181 AKSHVLSLGLFLWIIVLALAFFFGSGVKNSFIGPLPT 218
            K++VLS+ +FLWI+VLA+AFF GSGVK+SF GPLPT
Sbjct: 181 VKNYVLSMCVFLWIVVLAIAFFVGSGVKSSFTGPLPT 217

[Close]

BLAST of Tan0007140 vs. ExPASy TrEMBL
Match: A0A5D3BTA3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00440 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 4.7e-83
Identity = 171/217 (78.80%), Postives = 194/217 (89.40%), Query Frame = 0


Query: 1   MEKRTKDFQTPQRDQAANRRSRKPQKIAKSLTATFSSLSDDKIQPISKDDFSPISVVSNI 60
           MEKR KD QTPQR+Q  NRRSRKPQKIAK LTA+FSSLS+DKI  ISK++ SPISVVS++
Sbjct: 1   MEKRMKDHQTPQREQTTNRRSRKPQKIAKCLTASFSSLSEDKIHSISKENSSPISVVSDV 60

Query: 61  NQIPDIDSSFLQGVSPALSTSCESLLFPDLSPSSVVTFDNEQLDKVPVNFDVSNDLDEAS 120
           NQI DIDSSFLQGV+P  S  C++ LFPDLSPSSVV+FDNE LDKV V+F  SND++EAS
Sbjct: 61  NQISDIDSSFLQGVNPEFSACCDTSLFPDLSPSSVVSFDNELLDKVSVDFSGSNDMNEAS 120

Query: 121 AGSVEAEIAVNSLRRALTQVLQSTDVDHQSKKLIDASMRIIVDDFLAIPQERDQIAQLIS 180
           AGS+EAEIAVNSLRRALTQVL STDVDHQSKKLIDASMRIIVDDFLAIPQERD+IAQLIS
Sbjct: 121 AGSLEAEIAVNSLRRALTQVLLSTDVDHQSKKLIDASMRIIVDDFLAIPQERDRIAQLIS 180

Query: 181 AKSHVLSLGLFLWIIVLALAFFFGSGVKNSFIGPLPT 218
            K++VLS+ +FLWI+VLA+AFF GSGVK+SF GPLPT
Sbjct: 181 VKNYVLSMCVFLWIVVLAIAFFVGSGVKSSFTGPLPT 217

[Close]

BLAST of Tan0007140 vs. TAIR 10
Match: AT3G06600.1 (unknown protein; Has 14 Blast hits to 14 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 6.6e-05
Identity = 65/226 (28.76%), Postives = 106/226 (46.90%), Query Frame = 0


Query: 6   KDFQTPQRDQAAN-----RRSRKPQKIAKSLT------ATFSSLSDDKIQPISKD--DFS 65
           K+ Q P++  A +     +R + P+   + +T      ATFS +S +     +KD  DFS
Sbjct: 2   KEIQIPRKSFARSSELGAKRLKDPEMKNRKVTTEKRQIATFSDVSFES----TKDPMDFS 61

Query: 66  PISVVSNINQIPDIDS-SFLQGVSPALSTSCESLLFPDLSPSSVVTFDNEQLDKVPVNFD 125
           PIS +S    I D ++ S +QG S  L ++ E  L  D SP S +T        V    D
Sbjct: 62  PISQIS--GAISDSEAESVIQGSSLDLMSTPEICLPADDSPVSTIT-------SVEARID 121

Query: 126 VSNDLDEASAGSVEAEIAVNSLRRALTQVLQSTDVDHQSKKLIDASMRIIVDDFLAIPQE 185
            S+   +     V+   +V SLR  + ++          KKLI +     VD+      E
Sbjct: 122 TSS--TDRIQSIVDLPASVQSLRGEINEL----------KKLICS-----VDN----SAE 181

Query: 186 RDQIAQLISAKSHVLSLGLFLWIIVLALAFFFGSGVKNSFIGPLPT 218
            + + ++++ K  ++ L   LW I+ A+  FF SG + ++ GPLPT
Sbjct: 182 INWVDRVVTVKFRIVLLSFILWAILAAIVVFFSSGEERAYRGPLPT 193

[Close]

BLAST of Tan0007140 vs. TAIR 10
Match: AT3G06600.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 6.6e-05
Identity = 65/226 (28.76%), Postives = 106/226 (46.90%), Query Frame = 0


Query: 6   KDFQTPQRDQAAN-----RRSRKPQKIAKSLT------ATFSSLSDDKIQPISKD--DFS 65
           K+ Q P++  A +     +R + P+   + +T      ATFS +S +     +KD  DFS
Sbjct: 2   KEIQIPRKSFARSSELGAKRLKDPEMKNRKVTTEKRQIATFSDVSFES----TKDPMDFS 61

Query: 66  PISVVSNINQIPDIDS-SFLQGVSPALSTSCESLLFPDLSPSSVVTFDNEQLDKVPVNFD 125
           PIS +S    I D ++ S +QG S  L ++ E  L  D SP S +T        V    D
Sbjct: 62  PISQIS--GAISDSEAESVIQGSSLDLMSTPEICLPADDSPVSTIT-------SVEARID 121

Query: 126 VSNDLDEASAGSVEAEIAVNSLRRALTQVLQSTDVDHQSKKLIDASMRIIVDDFLAIPQE 185
            S+   +     V+   +V SLR  + ++          KKLI +     VD+      E
Sbjct: 122 TSS--TDRIQSIVDLPASVQSLRGEINEL----------KKLICS-----VDN----SAE 181

Query: 186 RDQIAQLISAKSHVLSLGLFLWIIVLALAFFFGSGVKNSFIGPLPT 218
            + + ++++ K  ++ L   LW I+ A+  FF SG + ++ GPLPT
Sbjct: 182 INWVDRVVTVKFRIVLLSFILWAILAAIVVFFSSGEERAYRGPLPT 193

The following BLAST results are available for this feature:

BLAST of Tan0007140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C900	9.3e-04	28.76	Protein SINE3 OS=Arabidopsis thaliana OX=3702 GN=SINE3 PE=1 SV=1	[more]

BLAST of Tan0007140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876305.1	2.1e-93	86.64	uncharacterized protein LOC120068561 [Benincasa hispida]	[more]
XP_022999957.1	1.6e-90	85.71	uncharacterized protein LOC111494286 [Cucurbita maxima] >XP_022999958.1 uncharac...	[more]
KAG6594019.1	2.1e-90	85.25	hypothetical protein SDJN03_13495, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022930352.1	3.7e-90	85.25	uncharacterized protein LOC111436822 [Cucurbita moschata]	[more]
XP_023514806.1	3.4e-88	83.87	uncharacterized protein LOC111779010 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Tan0007140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KL67	7.9e-91	85.71	uncharacterized protein LOC111494286 OS=Cucurbita maxima OX=3661 GN=LOC111494286...	[more]
A0A6J1EQ83	1.8e-90	85.25	uncharacterized protein LOC111436822 OS=Cucurbita moschata OX=3662 GN=LOC1114368...	[more]
A0A6J1H5Y6	3.6e-83	81.11	uncharacterized protein LOC111460327 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A1S4E1Y8	4.7e-83	78.80	uncharacterized protein LOC103497781 OS=Cucumis melo OX=3656 GN=LOC103497781 PE=...	[more]
A0A5D3BTA3	4.7e-83	78.80	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Tan0007140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G06600.1	6.6e-05	28.76	unknown protein; Has 14 Blast hits to 14 proteins in 5 species: Archae - 0; Bact...	[more]
AT3G06600.2	6.6e-05	28.76	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0007140.1	Tan0007140.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane