Tan0007100 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTTTGCAGTTACCCTCACAATTCGCATCCCCTTTAACTAACTCCACTTCTTTCTCTCTCTCTAAAAAATCTCCCCTTATTTCTCTCTCTATAAAACTTCTTCCAATTCTACTGTAACTGATCATTCAGTTCAGTTCAGTTCAACTGGGCCTTCTCGTTTTTGTTCAAAATCAAATGGGTCTGTGAGATTTTGGCGAAATGAGGACTGCAACAGGGGAAAATCCGAGCTCTACGCCACCAAAGCTGTCTCTGTTTTCTCTTCCAAGACAGCCGCCGGAGCCGCCGGGGATGGTTACGCCGCCGCTGCACGCGTCCATTTCTGTGCCGTTTCAGTGGGAAGAGGCGCCGGGGAAGCCGAGGCCGTTCGGAATTATTGAATCGAATTCAAATTCAAAGCCCAAAAGTGCAAGATCTTTGGATCTGCCGCCGAGGCTGTTCACCGACGCCAAAGTCGCCCATTTTGCGTCTCCGACGATCGCCGTGGATGATCCCGTCGCAGGCCGAGACCTGTCGTTCAGGTTCCCGGACAGCTGGGAGGAGACGGCGACGGCGACGGCGGCGGAGACGAGGGAGGGCAAGGATAGTAAATTTGTTGGGTCTAAACGGTGGATGAGCTTCAGGAAGAACAAGGAGATTCCGAAGCGTGGGTCTGAAATTTCGCTGTCGGCCGGCCGTGGTACTGCTGACGACGGCGGCGGTACGAGGGTGAAGATCACAAGGTTTAGGAGTAAAAGAAGCTTTTTTGGGACGTCGAATTCAAAGTCGCACTTGATCGTAAGTCTTCAACTATTTCAAAAGTAATTTTCAAGTTTCAATACTCTGACAATAGGCCTTAGAAAATTCTACACGGATCATTTGGTAATTGGCTCACTAAGTTAAAGTCCAAACAAACAAACATCTAGCTATGAACTATATATCATTATGTTATTATTTCAACTTATAATTTTGTTTAATTATATAAAACATTTATGAATTATAGAATTAGTTAGCACATCTAAGACATGTTTGAAACCGCATGTTATAATAATTTATGTGAAATACTTTACATTTTAAAAATAAATTCTATAAATTATTATAATTCATTTATCGTTCTAAACAATTTCTTAAAAACACAAATAGAATTGTATCCTAATTAAGAAGTATTTTATGTTATTTAGGACATGCTAAAATGCTTAAATAATTAATGCAGGCAAACATTTATGGGAGTTTGAAGCAAGTGATTCCATGGAGACGCAAGCATGACGAAATGAGAAAAGCATCACAGTGATCCTATAAAAAGGAAATAGAAAATCTAGATATATATAACCCA GTTTTGCAGTTACCCTCACAATTCGCATCCCCTTTAACTAACTCCACTTCTTTCTCTCTCTCTAAAAAATCTCCCCTTATTTCTCTCTCTATAAAACTTCTTCCAATTCTACTGTAACTGATCATTCAGTTCAGTTCAGTTCAACTGGGCCTTCTCGTTTTTGTTCAAAATCAAATGGGTCTGTGAGATTTTGGCGAAATGAGGACTGCAACAGGGGAAAATCCGAGCTCTACGCCACCAAAGCTGTCTCTGTTTTCTCTTCCAAGACAGCCGCCGGAGCCGCCGGGGATGGTTACGCCGCCGCTGCACGCGTCCATTTCTGTGCCGTTTCAGTGGGAAGAGGCGCCGGGGAAGCCGAGGCCGTTCGGAATTATTGAATCGAATTCAAATTCAAAGCCCAAAAGTGCAAGATCTTTGGATCTGCCGCCGAGGCTGTTCACCGACGCCAAAGTCGCCCATTTTGCGTCTCCGACGATCGCCGTGGATGATCCCGTCGCAGGCCGAGACCTGTCGTTCAGGTTCCCGGACAGCTGGGAGGAGACGGCGACGGCGACGGCGGCGGAGACGAGGGAGGGCAAGGATAGTAAATTTGTTGGGTCTAAACGGTGGATGAGCTTCAGGAAGAACAAGGAGATTCCGAAGCGTGGGTCTGAAATTTCGCTGTCGGCCGGCCGTGGTACTGCTGACGACGGCGGCGGTACGAGGGTGAAGATCACAAGGTTTAGGAGTAAAAGAAGCTTTTTTGGGACGTCGAATTCAAAGTCGCACTTGATCGCAAACATTTATGGGAGTTTGAAGCAAGTGATTCCATGGAGACGCAAGCATGACGAAATGAGAAAAGCATCACAGTGATCCTATAAAAAGGAAATAGAAAATCTAGATATATATAACCCA ATGAGGACTGCAACAGGGGAAAATCCGAGCTCTACGCCACCAAAGCTGTCTCTGTTTTCTCTTCCAAGACAGCCGCCGGAGCCGCCGGGGATGGTTACGCCGCCGCTGCACGCGTCCATTTCTGTGCCGTTTCAGTGGGAAGAGGCGCCGGGGAAGCCGAGGCCGTTCGGAATTATTGAATCGAATTCAAATTCAAAGCCCAAAAGTGCAAGATCTTTGGATCTGCCGCCGAGGCTGTTCACCGACGCCAAAGTCGCCCATTTTGCGTCTCCGACGATCGCCGTGGATGATCCCGTCGCAGGCCGAGACCTGTCGTTCAGGTTCCCGGACAGCTGGGAGGAGACGGCGACGGCGACGGCGGCGGAGACGAGGGAGGGCAAGGATAGTAAATTTGTTGGGTCTAAACGGTGGATGAGCTTCAGGAAGAACAAGGAGATTCCGAAGCGTGGGTCTGAAATTTCGCTGTCGGCCGGCCGTGGTACTGCTGACGACGGCGGCGGTACGAGGGTGAAGATCACAAGGTTTAGGAGTAAAAGAAGCTTTTTTGGGACGTCGAATTCAAAGTCGCACTTGATCGCAAACATTTATGGGAGTTTGAAGCAAGTGATTCCATGGAGACGCAAGCATGACGAAATGAGAAAAGCATCACAGTGA MRTATGENPSSTPPKLSLFSLPRQPPEPPGMVTPPLHASISVPFQWEEAPGKPRPFGIIESNSNSKPKSARSLDLPPRLFTDAKVAHFASPTIAVDDPVAGRDLSFRFPDSWEETATATAAETREGKDSKFVGSKRWMSFRKNKEIPKRGSEISLSAGRGTADDGGGTRVKITRFRSKRSFFGTSNSKSHLIANIYGSLKQVIPWRRKHDEMRKASQ Homology
BLAST of Tan0007100 vs. ExPASy Swiss-Prot
Match: Q9M160 (Uncharacterized protein At4g00950 OS=Arabidopsis thaliana OX=3702 GN=At4g00950 PE=2 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 1.4e-04 Identity = 34/94 (36.17%), Postives = 46/94 (48.94%), Query Frame = 0
BLAST of Tan0007100 vs. NCBI nr
Match: XP_008466837.1 (PREDICTED: uncharacterized protein LOC103504144 [Cucumis melo] >ADN33748.1 hypothetical protein [Cucumis melo subsp. melo]) HSP 1 Score: 332.8 bits (852), Expect = 2.2e-87 Identity = 176/226 (77.88%), Postives = 185/226 (81.86%), Query Frame = 0
BLAST of Tan0007100 vs. NCBI nr
Match: KAA0050514.1 (myosin heavy chain [Cucumis melo var. makuwa]) HSP 1 Score: 328.6 bits (841), Expect = 4.2e-86 Identity = 173/219 (79.00%), Postives = 182/219 (83.11%), Query Frame = 0
BLAST of Tan0007100 vs. NCBI nr
Match: TYK29189.1 (myosin heavy chain [Cucumis melo var. makuwa]) HSP 1 Score: 327.8 bits (839), Expect = 7.1e-86 Identity = 173/221 (78.28%), Postives = 182/221 (82.35%), Query Frame = 0
BLAST of Tan0007100 vs. NCBI nr
Match: XP_038882925.1 (uncharacterized protein At4g00950-like [Benincasa hispida]) HSP 1 Score: 322.8 bits (826), Expect = 2.3e-84 Identity = 170/217 (78.34%), Postives = 179/217 (82.49%), Query Frame = 0
BLAST of Tan0007100 vs. NCBI nr
Match: XP_004146225.1 (uncharacterized protein At4g00950 [Cucumis sativus] >KGN57661.1 hypothetical protein Csa_010837 [Cucumis sativus]) HSP 1 Score: 317.4 bits (812), Expect = 9.6e-83 Identity = 170/224 (75.89%), Postives = 181/224 (80.80%), Query Frame = 0
BLAST of Tan0007100 vs. ExPASy TrEMBL
Match: E5GBA5 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 1.1e-87 Identity = 176/226 (77.88%), Postives = 185/226 (81.86%), Query Frame = 0
BLAST of Tan0007100 vs. ExPASy TrEMBL
Match: A0A1S3CS64 (uncharacterized protein LOC103504144 OS=Cucumis melo OX=3656 GN=LOC103504144 PE=4 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 1.1e-87 Identity = 176/226 (77.88%), Postives = 185/226 (81.86%), Query Frame = 0
BLAST of Tan0007100 vs. ExPASy TrEMBL
Match: A0A5A7U5K0 (Myosin heavy chain OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G001580 PE=4 SV=1) HSP 1 Score: 328.6 bits (841), Expect = 2.0e-86 Identity = 173/219 (79.00%), Postives = 182/219 (83.11%), Query Frame = 0
BLAST of Tan0007100 vs. ExPASy TrEMBL
Match: A0A5D3E0H1 (Myosin heavy chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G003810 PE=4 SV=1) HSP 1 Score: 327.8 bits (839), Expect = 3.5e-86 Identity = 173/221 (78.28%), Postives = 182/221 (82.35%), Query Frame = 0
BLAST of Tan0007100 vs. ExPASy TrEMBL
Match: A0A0A0LC85 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G239250 PE=4 SV=1) HSP 1 Score: 317.4 bits (812), Expect = 4.7e-83 Identity = 170/224 (75.89%), Postives = 181/224 (80.80%), Query Frame = 0
BLAST of Tan0007100 vs. TAIR 10
Match: AT4G27810.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G53030.1); Has 73 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 100.5 bits (249), Expect = 1.7e-21 Identity = 76/213 (35.68%), Postives = 99/213 (46.48%), Query Frame = 0
BLAST of Tan0007100 vs. TAIR 10
Match: AT5G53030.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 91.7 bits (226), Expect = 8.0e-19 Identity = 76/232 (32.76%), Postives = 107/232 (46.12%), Query Frame = 0
BLAST of Tan0007100 vs. TAIR 10
Match: AT5G53030.2 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 73.6 bits (179), Expect = 2.3e-13 Identity = 69/208 (33.17%), Postives = 94/208 (45.19%), Query Frame = 0
BLAST of Tan0007100 vs. TAIR 10
Match: AT2G46535.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF688) (TAIR:AT3G61840.1); Has 48 Blast hits to 48 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 48.5 bits (114), Expect = 7.8e-06 Identity = 47/193 (24.35%), Postives = 73/193 (37.82%), Query Frame = 0
BLAST of Tan0007100 vs. TAIR 10
Match: AT4G00950.1 (Protein of unknown function (DUF688) ) HSP 1 Score: 48.1 bits (113), Expect = 1.0e-05 Identity = 34/94 (36.17%), Postives = 46/94 (48.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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