Tan0007010 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCAAAATAGAGAAAAAATGGCAGACAAGAAATCGCCATTGCTATTCCGCCTGAAGAAGCCAGTGATAAAACTCACTGCATTCCTCCGCCTCTGCCTCGCTCGCCGCCAACCTTCTCGACGGCTGCGATCATTCAGTTCCGACGATCGGACGGTAGGGCTACGGAGTTTCTTGGAAGACAAGATACTTGTTCAGAATTGTTCTGTGAGAAAGCTTGAACGTGCTTCATCGAGTTCAAGCTATGTAAATTTCGAAGACGATGTCGATAAGCGATCTCAGATCTTCATCGATAATTTTCGGCGTCAATTGAGGTTAGAAAGACAAATTTCTTTGCAATTGAGGTACTGTAGAATTAATAGCTCTGAAACGGAGTATGAAGAGAGATCGCCGCCGTGTTCGTCGATTCGATGAACAAAATTATTTTAGAAATCGAAGTGAATTGCTG TCCAAAATAGAGAAAAAATGGCAGACAAGAAATCGCCATTGCTATTCCGCCTGAAGAAGCCAGTGATAAAACTCACTGCATTCCTCCGCCTCTGCCTCGCTCGCCGCCAACCTTCTCGACGGCTGCGATCATTCAGTTCCGACGATCGGACGGTAGGGCTACGGAGTTTCTTGGAAGACAAGATACTTGTTCAGAATTGTTCTGTGAGAAAGCTTGAACGTGCTTCATCGAGTTCAAGCTATGTAAATTTCGAAGACGATGTCGATAAGCGATCTCAGATCTTCATCGATAATTTTCGGCGTCAATTGAGGTTAGAAAGACAAATTTCTTTGCAATTGAGGTACTGTAGAATTAATAGCTCTGAAACGGAGTATGAAGAGAGATCGCCGCCGTGTTCGTCGATTCGATGAACAAAATTATTTTAGAAATCGAAGTGAATTGCTG ATGGCAGACAAGAAATCGCCATTGCTATTCCGCCTGAAGAAGCCAGTGATAAAACTCACTGCATTCCTCCGCCTCTGCCTCGCTCGCCGCCAACCTTCTCGACGGCTGCGATCATTCAGTTCCGACGATCGGACGGTAGGGCTACGGAGTTTCTTGGAAGACAAGATACTTGTTCAGAATTGTTCTGTGAGAAAGCTTGAACGTGCTTCATCGAGTTCAAGCTATGTAAATTTCGAAGACGATGTCGATAAGCGATCTCAGATCTTCATCGATAATTTTCGGCGTCAATTGAGGTTAGAAAGACAAATTTCTTTGCAATTGAGGTACTGTAGAATTAATAGCTCTGAAACGGAGTATGAAGAGAGATCGCCGCCGTGTTCGTCGATTCGATGA MADKKSPLLFRLKKPVIKLTAFLRLCLARRQPSRRLRSFSSDDRTVGLRSFLEDKILVQNCSVRKLERASSSSSYVNFEDDVDKRSQIFIDNFRRQLRLERQISLQLRYCRINSSETEYEERSPPCSSIR Homology
BLAST of Tan0007010 vs. NCBI nr
Match: KAG6596691.1 (hypothetical protein SDJN03_09871, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028225.1 hypothetical protein SDJN02_09405, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 199.9 bits (507), Expect = 1.3e-47 Identity = 109/130 (83.85%), Postives = 116/130 (89.23%), Query Frame = 0
BLAST of Tan0007010 vs. NCBI nr
Match: XP_022145292.1 (uncharacterized protein LOC111014780 [Momordica charantia]) HSP 1 Score: 169.9 bits (429), Expect = 1.5e-38 Identity = 101/137 (73.72%), Postives = 112/137 (81.75%), Query Frame = 0
BLAST of Tan0007010 vs. NCBI nr
Match: KAG7015798.1 (hypothetical protein SDJN02_23436, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 151.4 bits (381), Expect = 5.5e-33 Identity = 83/128 (64.84%), Postives = 100/128 (78.12%), Query Frame = 0
BLAST of Tan0007010 vs. NCBI nr
Match: KAG6577759.1 (hypothetical protein SDJN03_25333, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 149.1 bits (375), Expect = 2.7e-32 Identity = 82/128 (64.06%), Postives = 99/128 (77.34%), Query Frame = 0
BLAST of Tan0007010 vs. NCBI nr
Match: KAA0052985.1 (hypothetical protein E6C27_scaffold344G00960 [Cucumis melo var. makuwa] >TYK11441.1 hypothetical protein E5676_scaffold139G00970 [Cucumis melo var. makuwa]) HSP 1 Score: 148.7 bits (374), Expect = 3.6e-32 Identity = 84/129 (65.12%), Postives = 102/129 (79.07%), Query Frame = 0
BLAST of Tan0007010 vs. ExPASy TrEMBL
Match: A0A6J1CW64 (uncharacterized protein LOC111014780 OS=Momordica charantia OX=3673 GN=LOC111014780 PE=4 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 7.2e-39 Identity = 101/137 (73.72%), Postives = 112/137 (81.75%), Query Frame = 0
BLAST of Tan0007010 vs. ExPASy TrEMBL
Match: A0A5D3CHZ5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00970 PE=4 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 1.7e-32 Identity = 84/129 (65.12%), Postives = 102/129 (79.07%), Query Frame = 0
BLAST of Tan0007010 vs. ExPASy TrEMBL
Match: A0A0A0L4Z8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G004530 PE=4 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 2.7e-30 Identity = 83/126 (65.87%), Postives = 100/126 (79.37%), Query Frame = 0
BLAST of Tan0007010 vs. ExPASy TrEMBL
Match: A0A6J1CVX6 (ELL-associated factor 1-like OS=Momordica charantia OX=3673 GN=LOC111014779 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 4.3e-15 Identity = 71/146 (48.63%), Postives = 86/146 (58.90%), Query Frame = 0
BLAST of Tan0007010 vs. ExPASy TrEMBL
Match: A0A1R3J730 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_19032 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.8e-13 Identity = 59/126 (46.83%), Postives = 74/126 (58.73%), Query Frame = 0
BLAST of Tan0007010 vs. TAIR 10
Match: AT5G57510.1 (unknown protein; Has 27 Blast hits to 27 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 49.7 bits (117), Expect = 2.1e-06 Identity = 23/46 (50.00%), Postives = 36/46 (78.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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