Tan0006971 (gene) Snake gourd v1

Overview
NameTan0006971
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionSNF1-related protein kinase regulatory subunit beta-3-like
LocationLG05: 1699579 .. 1702963 (-)
RNA-Seq ExpressionTan0006971
SyntenyTan0006971
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTGGTACTGGTCCCCTTTGCCTTTTTAGTTTTCAGCCCTCTCTTAGTCTTCCCCTTCCCCTCTCTTCTCTTTTACTTTTGCCCTTCTTTCTTCCAACTTTCCTTCTTCCTTTCTTCATTGCCTCTCCTTTTCTTGTAAAGTATCTATTAAGCTCTTTGCCTATTTTCCTTTTCCTAACCTTCAACTCTTCTCTTCTCTTCTCTTCTCCTCTCCACTCCAGGGTTTTTCCTATTTCAACTTCAATTTCCCTGCCTTAACTTTCTTTTTTGCTTCTTCCAATTCACCCACCTTCAAATTTTACATTTTTCTCTCCTAATTTTCCAATGTTCTTATTTCACTGATTCGTTTCATGGGTTGCTTATAATTTGTTGCAGGTAAGTTTCGGCTTTGGGAATTCGGTTATTGTTCCATTGTCGTTTCTGGGTTTCTCTCTGGTCTTTCTCTGGAGCTTCTTGATCGATAGTTGAAGGCTCAAAATCCTCTAATCATCCAGGTCAATCTCTTCTCTTTTCAATTTTGCATAATGCTGCAGCGCCTATGAAGTTCTATTTCAGCTTAAACATGCTCCATTAGATATTGTTTATATTGTTACCCTTATGATGTGTTTTTTTTCTCTTTCACGAATGATCCCATCCTGTGCTAATCTGTTTCCTTCCTGGTTCGAGCATATCGTGTCATATATAGGTTTTATTTTTCTTATGGGTCTCTCTCAATCTGTTTCTTTTTCGTTTTCTTCGTAATCTGCACTCTGTGCATATTGAATTGAAAGCTGGACAGCCAACTGCAGCATTCAAGGAATGAAATATTGATGACAAGAATAGGATTTCAATTTGGTTTAGTTTCTTCCTAGTGTCATATCACGAGTCTGGTAAGAATTTTACCCAATACCACACCTATCATCGATGAATGGAATGCAACTTTGCTCTAGTACCTTGGTTGTTTCTAGACAATGAAACGATTTTATAAGCTATACCATTTCCTTATGAATTTTATTAATGACCAAAGAAAGATCTCAACAATGTAATCTTAAAAATGGAAAGATTTTACCATATCTCAATTTGAGCGTATAGTCTTTTGACTTATTCCACGTCTTCTATCATTAAATTGCTAGGCATGCTTCTTTTAATGTCTGCTTATCTAACACTACTATAGGATGTTATGGATAAAAGGTATTGACAACTTGGTTCTCCAATGTTTATTTTGTTTATATGGTAGCTCTATTCCTAACCATAATATACAGCCACAATGTTTCTGGATGTCTGTAAGTTTATGATCTTATTGGTAGTGCTTTGATGGCTTACTAATTACCTAATTACAAAACATTACTAAATTAATAAGAACGAGACACAATAGAAAAACTCTAAAATCCCTAGTTATTGAAATCTAATATCTCTGATTTTTCAAGCCAAATGTTCCATGAGATGGAAAAGTGAGTAGCTTACCATAGTGCCACCCCCATCCCAAAGAAAGGGTGAAACGTGACAACACCTTCCTTCCTCATCATAGACTACCAAGATTGGCTACAAGTTATCTGCTCTCCAGAAGCCTCCAAAAAAATTGTCTTTAATTGCACTTAAACATGCACCGTATCCTTCAGAGCACATTTACAAACATGGCACTACAAGGACCCCTAAAGAAAAGAATACAATTTTTGCATCAGGTCAATAGTGTCAATCTTCATGTGAGAGCCTTGCTTGATGAAAATTTTGGCCTTCTTGGAGTCTCGCCTTCCAAAGGGAGGAGAACAAGGAGGGAGTGAAGGGCTAGATTCACACAAAAAGGAGAAGGAGGTTCGGGTAAACTCTCAAGAAAGATTAGAGGACCATTGGACCAACAATAAACATCCCTACTCTCGGGCATGGATAGAATGATTACAATCGAGTGATCAAAGCAGGAGAATAGTCACAGAACACTCTGGAAGAAGAGCTCCAAAGGCATCAAGATTAACATTGTCCCAATTTTTTGTTGAGCTTGAAACTAGAGATTATGATTTGACTCTACCAACATTTGCTAGTCTGATAACACATGGAATATTTAAGGATTTTTCCACTATACATTCTTGGATCTGATGCTTAAAGTTTGATCGACATGCCTGATGAACTTACAAAAGAAACAATAATGGGATTGCTCAACAGTTCCCATAGTCTCTCGTTAAGTTTCCAAGTCTCTGGTTTGGATCCAAAAGGGAAACATTATGGGAGAGAATTAATGGCGAGTGTGCTACTTGAATTCATACATCAATGAACTTGTCTTGATCTCTTACTAAAGCTCATCTTCTGTAGGTTTCTAACTAGTTATGTTAGGAGAATGAAATGCCATATTGGTTAACATTCATTGCAAGTTTATATCTGAAGTGTATCCTTGATTGATTTGAAGGTAGTTAGACCACAGCCAGAAGGTCGTACATGGTATACAAAATTTTATGAAAATTCTCACTCAAGAAAAACTGTGTTCTTTTCAGGTTTCCAGTTTCATAATTTTCTGCAATTGATGATTTTTTGCTGTTAGCTTGGAAGTTTTCATTTCAACATGAACAACCCTTACTCTGAAGATAGTGTAAGCTGCTAAACCTAGGTGTTTTCATCAACTAATAACATGAAATAGGGCTTTAAAGATGTATTCTTTCTGCAGGATCAGACCACCGTAGTGGGTTTTGAAGTTCCCAAATCACCGGATTCAACCTATAACAATGTATACCTTGGGAGCGAAGACGAGGCGCGTGATCCACTCCTTGTCCCGCCTCATTTGCAGCATACCTTACTCAGCCACCCAGCAAGTAGAGATGCTAGTGGAACTCTTCCGTTGCCACAGAATGTGATTCTCAACCATCTTTTTATTGAAAACCGGGAGACTCCACGCTCCGTTGTGGCTCTTGGATTCACACATCGTTTTTATTCAAAATATGTCACGGTTGTGCTTTACAAACCAGTTCATAGAAGAGGAAGTAGCAGGGCTTAGTTATGCATATACATCGAAAACTTTCACTAGAATTAGTCTATTGGATGTTGTTACATGGATTTAGCGGTAGAAAATGTTTATGACATGTGATATGTCCATGAAGTTAGGGTGGAAGCATTTAACTTCACCTAGTAAATGAATATTGACGACGTAGATAATGTGTTGTGCCTGTATTTTTTGAACTGTTTAGTGTAGTAATTGAAAACATTCAAGCAGATGCATCTTCTAGCTGTTAAAGGTGCAAACACTTGTTGACATGAACTTTAAAGTCGGCTATTTCTTAAATTGGAGTTCAGACTCTAGAGTTATGATTGTAGGGCGTAAGGCCAGTTTGTAATGTCTCCATTATTAGTATTTAGTTAGGCGAACCACCAAACCATCTGGGGGTGTTGATTAGACGTGTAAGTTATTGGAAACAAGTAAGAC

mRNA sequence

AGTGGTACTGGTCCCCTTTGCCTTTTTAGTTTTCAGCCCTCTCTTAGTCTTCCCCTTCCCCTCTCTTCTCTTTTACTTTTGCCCTTCTTTCTTCCAACTTTCCTTCTTCCTTTCTTCATTGCCTCTCCTTTTCTTGTAAAGTATCTATTAAGCTCTTTGCCTATTTTCCTTTTCCTAACCTTCAACTCTTCTCTTCTCTTCTCTTCTCCTCTCCACTCCAGGGTTTTTCCTATTTCAACTTCAATTTCCCTGCCTTAACTTTCTTTTTTGCTTCTTCCAATTCACCCACCTTCAAATTTTACATTTTTCTCTCCTAATTTTCCAATGTTCTTATTTCACTGATTCGTTTCATGGGTTGCTTATAATTTGTTGCAGGTAAGTTTCGGCTTTGGGAATTCGGTTATTGTTCCATTGTCGTTTCTGGGTTTCTCTCTGGTCTTTCTCTGGAGCTTCTTGATCGATAGTTGAAGGCTCAAAATCCTCTAATCATCCAGGTTTCCAGTTTCATAATTTTCTGCAATTGATGATTTTTTGCTGTTAGCTTGGAAGTTTTCATTTCAACATGAACAACCCTTACTCTGAAGATAGTGATCAGACCACCGTAGTGGGTTTTGAAGTTCCCAAATCACCGGATTCAACCTATAACAATGTATACCTTGGGAGCGAAGACGAGGCGCGTGATCCACTCCTTGTCCCGCCTCATTTGCAGCATACCTTACTCAGCCACCCAGCAAGTAGAGATGCTAGTGGAACTCTTCCGTTGCCACAGAATGTGATTCTCAACCATCTTTTTATTGAAAACCGGGAGACTCCACGCTCCGTTGTGGCTCTTGGATTCACACATCGTTTTTATTCAAAATATGTCACGGTTGTGCTTTACAAACCAGTTCATAGAAGAGGAAGTAGCAGGGCTTAGTTATGCATATACATCGAAAACTTTCACTAGAATTAGTCTATTGGATGTTGTTACATGGATTTAGCGGTAGAAAATGTTTATGACATGTGATATGTCCATGAAGTTAGGGTGGAAGCATTTAACTTCACCTAGTAAATGAATATTGACGACGTAGATAATGTGTTGTGCCTGTATTTTTTGAACTGTTTAGTGTAGTAATTGAAAACATTCAAGCAGATGCATCTTCTAGCTGTTAAAGGTGCAAACACTTGTTGACATGAACTTTAAAGTCGGCTATTTCTTAAATTGGAGTTCAGACTCTAGAGTTATGATTGTAGGGCGTAAGGCCAGTTTGTAATGTCTCCATTATTAGTATTTAGTTAGGCGAACCACCAAACCATCTGGGGGTGTTGATTAGACGTGTAAGTTATTGGAAACAAGTAAGAC

Coding sequence (CDS)

ATGAACAACCCTTACTCTGAAGATAGTGATCAGACCACCGTAGTGGGTTTTGAAGTTCCCAAATCACCGGATTCAACCTATAACAATGTATACCTTGGGAGCGAAGACGAGGCGCGTGATCCACTCCTTGTCCCGCCTCATTTGCAGCATACCTTACTCAGCCACCCAGCAAGTAGAGATGCTAGTGGAACTCTTCCGTTGCCACAGAATGTGATTCTCAACCATCTTTTTATTGAAAACCGGGAGACTCCACGCTCCGTTGTGGCTCTTGGATTCACACATCGTTTTTATTCAAAATATGTCACGGTTGTGCTTTACAAACCAGTTCATAGAAGAGGAAGTAGCAGGGCTTAG

Protein sequence

MNNPYSEDSDQTTVVGFEVPKSPDSTYNNVYLGSEDEARDPLLVPPHLQHTLLSHPASRDASGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFYSKYVTVVLYKPVHRRGSSRA
Homology
[Close]
BLAST of Tan0006971 vs. ExPASy Swiss-Prot
Match: Q9ZUU8 (SNF1-related protein kinase regulatory subunit beta-3 OS=Arabidopsis thaliana OX=3702 GN=KINB3 PE=1 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.1e-35
Identity = 73/115 (63.48%), Postives = 90/115 (78.26%), Query Frame = 0 

Query: 1   MNNPYSEDSDQTTVVGFEVPKSPDSTYNNVYLGSEDEARDPLLVPPHLQHTLLSHPASRD 60
           MN+   +D + TTVVGFEVP SP S+YNNVY  +EDE RDP  VPPHLQH+LL +  S +
Sbjct: 1   MNSQNPDDHEDTTVVGFEVPVSPVSSYNNVYSSTEDETRDPPAVPPHLQHSLLGNQGSME 60

Query: 61  ASGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFYSKYVTVVLYKPVHRRGSS 116
            +     PQNV+LNHL+IENR+ PRSVVALGF+HRF +K+VTVV+YKPV RRGS+
Sbjct: 61  LAYA---PQNVVLNHLYIENRDAPRSVVALGFSHRFRTKFVTVVIYKPVQRRGSA 112

[Close]
BLAST of Tan0006971 vs. ExPASy Swiss-Prot
Match: Q9SCY5 (SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana OX=3702 GN=KINB2 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 8.8e-25
Identity = 56/103 (54.37%), Postives = 79/103 (76.70%), Query Frame = 0 

Query: 10  DQTTVVGFEVPKSPDSTYNNVYLGSEDEARDPLLVPPHLQHTLLSHPASR-DASGTLPLP 69
           D  ++ GFE P+SP+++Y+N+ LG+ED +++P +VPPHLQ TLL+ PA+  D    LP P
Sbjct: 187 DIQSISGFEPPQSPENSYSNLLLGAEDYSKEPPVVPPHLQMTLLNLPAANPDIPSPLPRP 246

Query: 70  QNVILNHLFIENRETPRSVVALGFTHRFYSKYVTVVLYKPVHR 112
           Q+VILNHL+++  ++  SVVALG THRF +KYVTVVLYK + R
Sbjct: 247 QHVILNHLYMQKGKSGPSVVALGSTHRFLAKYVTVVLYKSLQR 289

[Close]
BLAST of Tan0006971 vs. ExPASy Swiss-Prot
Match: Q84VQ1 (SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana OX=3702 GN=KINB1 PE=1 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.0e-21
Identity = 51/99 (51.52%), Postives = 67/99 (67.68%), Query Frame = 0 

Query: 13  TVVGFEVPKSPDSTYNNVYLGSEDEARDPLLVPPHLQHTLLSHPASRDASGTLPLPQNVI 72
           ++V FE P SPD +Y      +ED A++PL VPP L  TLL    + + +     PQ+V+
Sbjct: 188 SIVEFEAPPSPDHSYGQTLPAAEDYAKEPLAVPPQLHLTLL---GTTEETAIATKPQHVV 247

Query: 73  LNHLFIENRETPRSVVALGFTHRFYSKYVTVVLYKPVHR 112
           LNH+FIE   TP+S+VALG THRF SKY+TVVLYKP+ R
Sbjct: 248 LNHVFIEQGWTPQSIVALGLTHRFESKYITVVLYKPLTR 283

[Close]
BLAST of Tan0006971 vs. ExPASy Swiss-Prot
Match: Q9QZH4 (5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Prkab2 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.6e-08
Identity = 34/95 (35.79%), Postives = 50/95 (52.63%), Query Frame = 0 

Query: 18  EVPKSPDSTYNN--VYLGSEDEARDPLLVPPHLQHTLLSHPASRDAS-GTLPLPQNVILN 77
           ++  SP   Y        SE+  + P ++PPHL   +L+   +       LP P +V+LN
Sbjct: 179 DLSSSPPGPYGQEMYVFRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLN 238

Query: 78  HLFIENRETPRSVVALGFTHRFYSKYVTVVLYKPV 110
           HL+     T  SV+ L  THR+  KYVT +LYKP+
Sbjct: 239 HLYA--LSTKDSVMVLSATHRYKKKYVTTLLYKPI 271

[Close]
BLAST of Tan0006971 vs. ExPASy Swiss-Prot
Match: O43741 (5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens OX=9606 GN=PRKAB2 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 9.7e-08
Identity = 33/95 (34.74%), Postives = 51/95 (53.68%), Query Frame = 0 

Query: 18  EVPKSPDSTYNNVYLG--SEDEARDPLLVPPHLQHTLLSHPASRDAS-GTLPLPQNVILN 77
           ++  SP   Y        SE+  + P ++PPHL   +L+   +       LP P +V+LN
Sbjct: 180 DLSSSPPGPYGQEMYAFRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLN 239

Query: 78  HLFIENRETPRSVVALGFTHRFYSKYVTVVLYKPV 110
           HL+  + +   SV+ L  THR+  KYVT +LYKP+
Sbjct: 240 HLYALSIKD--SVMVLSATHRYKKKYVTTLLYKPI 272

[Close]
BLAST of Tan0006971 vs. NCBI nr
Match: XP_022958406.1 (SNF1-related protein kinase regulatory subunit beta-3-like [Cucurbita moschata] >XP_022958407.1 SNF1-related protein kinase regulatory subunit beta-3-like [Cucurbita moschata] >XP_022958408.1 SNF1-related protein kinase regulatory subunit beta-3-like [Cucurbita moschata] >KAG6606042.1 SNF1-related protein kinase regulatory subunit beta-3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035994.1 SNF1-related protein kinase regulatory subunit beta-3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 224.6 bits (571), Expect = 4.6e-55
Identity = 107/115 (93.04%), Postives = 111/115 (96.52%), Query Frame = 0 

Query: 1   MNNPYSEDSDQTTVVGFEVPKSPDSTYNNVYLGSEDEARDPLLVPPHLQHTLLSHPASRD 60
           MNNP+ EDSDQTTVVGFEVPKSPDSTYNNVYLGSED+ARDP  VPPHLQHTLLSHPASRD
Sbjct: 1   MNNPFPEDSDQTTVVGFEVPKSPDSTYNNVYLGSEDDARDPPPVPPHLQHTLLSHPASRD 60

Query: 61  ASGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFYSKYVTVVLYKPVHRRGSS 116
           A GTLPLPQNV+LNHLFIENRETPRSVVALGFTHRF+SKYVTVVLYKPVHRRGSS
Sbjct: 61  AGGTLPLPQNVVLNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKPVHRRGSS 115

[Close]
BLAST of Tan0006971 vs. NCBI nr
Match: XP_004145755.1 (SNF1-related protein kinase regulatory subunit beta-3 [Cucumis sativus] >XP_008465360.1 PREDICTED: SNF1-related protein kinase regulatory subunit beta-3 [Cucumis melo] >XP_008465361.1 PREDICTED: SNF1-related protein kinase regulatory subunit beta-3 [Cucumis melo] >XP_011657018.1 SNF1-related protein kinase regulatory subunit beta-3 [Cucumis sativus] >XP_016903370.1 PREDICTED: SNF1-related protein kinase regulatory subunit beta-3 [Cucumis melo] >XP_031742408.1 SNF1-related protein kinase regulatory subunit beta-3 [Cucumis sativus] >KAA0035235.1 SNF1-related protein kinase regulatory subunit beta-3 isoform X2 [Cucumis melo var. makuwa] >KGN46863.1 hypothetical protein Csa_020718 [Cucumis sativus] >TYK22390.1 SNF1-related protein kinase regulatory subunit beta-3 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 224.2 bits (570), Expect = 6.0e-55
Identity = 109/117 (93.16%), Postives = 112/117 (95.73%), Query Frame = 0 

Query: 1   MNNPYSEDSDQTTVVGFEVPKSPDSTYNNVYLGSEDEARDPLLVPPHLQHTLLSHPASRD 60
           MNN YSEDSDQTTVVGFEVPKSPDSTYNN+Y+GSEDEARDP LVPPHLQHTLLS PASRD
Sbjct: 1   MNNLYSEDSDQTTVVGFEVPKSPDSTYNNIYVGSEDEARDPPLVPPHLQHTLLSQPASRD 60

Query: 61  ASGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFYSKYVTVVLYKPVHRRGSSRA 118
           A  TLPLPQNVILNHLFIENRETPRSVVALGFTHRF+SKYVTVVLYKPVHRRGSSRA
Sbjct: 61  AGETLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKPVHRRGSSRA 117

[Close]
BLAST of Tan0006971 vs. NCBI nr
Match: XP_022140750.1 (SNF1-related protein kinase regulatory subunit beta-3 [Momordica charantia] >XP_022140751.1 SNF1-related protein kinase regulatory subunit beta-3 [Momordica charantia])

HSP 1 Score: 223.4 bits (568), Expect = 1.0e-54
Identity = 107/117 (91.45%), Postives = 110/117 (94.02%), Query Frame = 0 

Query: 1   MNNPYSEDSDQTTVVGFEVPKSPDSTYNNVYLGSEDEARDPLLVPPHLQHTLLSHPASRD 60
           MNNPYSEDSDQTTVVGFEVP SPDSTYNN+YLGSEDEARDP   PPHLQHTLLSHPASRD
Sbjct: 1   MNNPYSEDSDQTTVVGFEVPNSPDSTYNNLYLGSEDEARDPPFAPPHLQHTLLSHPASRD 60

Query: 61  ASGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFYSKYVTVVLYKPVHRRGSSRA 118
           A GTLPLP NVILNHL+IENRETPRSVVALGFTHRF SK+VTVVLYKPVHRRGSSRA
Sbjct: 61  AGGTLPLPHNVILNHLYIENRETPRSVVALGFTHRFRSKFVTVVLYKPVHRRGSSRA 117

[Close]
BLAST of Tan0006971 vs. NCBI nr
Match: XP_022996167.1 (SNF1-related protein kinase regulatory subunit beta-3-like [Cucurbita maxima] >XP_022996168.1 SNF1-related protein kinase regulatory subunit beta-3-like [Cucurbita maxima] >XP_022996169.1 SNF1-related protein kinase regulatory subunit beta-3-like [Cucurbita maxima])

HSP 1 Score: 223.0 bits (567), Expect = 1.3e-54
Identity = 106/115 (92.17%), Postives = 110/115 (95.65%), Query Frame = 0 

Query: 1   MNNPYSEDSDQTTVVGFEVPKSPDSTYNNVYLGSEDEARDPLLVPPHLQHTLLSHPASRD 60
           MNNP+ EDSDQTTVVGFEVPKSPDSTYNNVYLGSED+ARDP  VPPHLQHTLLSHPA RD
Sbjct: 1   MNNPFPEDSDQTTVVGFEVPKSPDSTYNNVYLGSEDDARDPPPVPPHLQHTLLSHPAGRD 60

Query: 61  ASGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFYSKYVTVVLYKPVHRRGSS 116
           A GTLPLPQNV+LNHLFIENRETPRSVVALGFTHRF+SKYVTVVLYKPVHRRGSS
Sbjct: 61  AGGTLPLPQNVVLNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKPVHRRGSS 115

[Close]
BLAST of Tan0006971 vs. NCBI nr
Match: XP_038902942.1 (SNF1-related protein kinase regulatory subunit beta-3 [Benincasa hispida] >XP_038902943.1 SNF1-related protein kinase regulatory subunit beta-3 [Benincasa hispida])

HSP 1 Score: 219.2 bits (557), Expect = 1.9e-53
Identity = 108/117 (92.31%), Postives = 110/117 (94.02%), Query Frame = 0 

Query: 1   MNNPYSEDSDQTTVVGFEVPKSPDSTYNNVYLGSEDEARDPLLVPPHLQHTLLSHPASRD 60
           MNN  SEDSDQ TVVGFEVPKSPDSTYNNVY+GSEDEARDP LVPPHLQHTLLS PASRD
Sbjct: 1   MNNLCSEDSDQNTVVGFEVPKSPDSTYNNVYVGSEDEARDPPLVPPHLQHTLLSQPASRD 60

Query: 61  ASGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFYSKYVTVVLYKPVHRRGSSRA 118
           A  TLPLPQNVILNHLFIENRETPRSVVALGFTHRF+SKYVTVVLYKPVHRRGSSRA
Sbjct: 61  AGETLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKPVHRRGSSRA 117

[Close]
BLAST of Tan0006971 vs. ExPASy TrEMBL
Match: A0A6J1H1Z8 (SNF1-related protein kinase regulatory subunit beta-3-like OS=Cucurbita moschata OX=3662 GN=LOC111459640 PE=3 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 2.2e-55
Identity = 107/115 (93.04%), Postives = 111/115 (96.52%), Query Frame = 0 

Query: 1   MNNPYSEDSDQTTVVGFEVPKSPDSTYNNVYLGSEDEARDPLLVPPHLQHTLLSHPASRD 60
           MNNP+ EDSDQTTVVGFEVPKSPDSTYNNVYLGSED+ARDP  VPPHLQHTLLSHPASRD
Sbjct: 1   MNNPFPEDSDQTTVVGFEVPKSPDSTYNNVYLGSEDDARDPPPVPPHLQHTLLSHPASRD 60

Query: 61  ASGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFYSKYVTVVLYKPVHRRGSS 116
           A GTLPLPQNV+LNHLFIENRETPRSVVALGFTHRF+SKYVTVVLYKPVHRRGSS
Sbjct: 61  AGGTLPLPQNVVLNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKPVHRRGSS 115

[Close]
BLAST of Tan0006971 vs. ExPASy TrEMBL
Match: A0A1S3CP39 (SNF1-related protein kinase regulatory subunit beta-3 OS=Cucumis melo OX=3656 GN=LOC103502997 PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 2.9e-55
Identity = 109/117 (93.16%), Postives = 112/117 (95.73%), Query Frame = 0 

Query: 1   MNNPYSEDSDQTTVVGFEVPKSPDSTYNNVYLGSEDEARDPLLVPPHLQHTLLSHPASRD 60
           MNN YSEDSDQTTVVGFEVPKSPDSTYNN+Y+GSEDEARDP LVPPHLQHTLLS PASRD
Sbjct: 1   MNNLYSEDSDQTTVVGFEVPKSPDSTYNNIYVGSEDEARDPPLVPPHLQHTLLSQPASRD 60

Query: 61  ASGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFYSKYVTVVLYKPVHRRGSSRA 118
           A  TLPLPQNVILNHLFIENRETPRSVVALGFTHRF+SKYVTVVLYKPVHRRGSSRA
Sbjct: 61  AGETLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKPVHRRGSSRA 117

[Close]
BLAST of Tan0006971 vs. ExPASy TrEMBL
Match: A0A5A7T1A3 (SNF1-related protein kinase regulatory subunit beta-3 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold173G00140 PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 2.9e-55
Identity = 109/117 (93.16%), Postives = 112/117 (95.73%), Query Frame = 0 

Query: 1   MNNPYSEDSDQTTVVGFEVPKSPDSTYNNVYLGSEDEARDPLLVPPHLQHTLLSHPASRD 60
           MNN YSEDSDQTTVVGFEVPKSPDSTYNN+Y+GSEDEARDP LVPPHLQHTLLS PASRD
Sbjct: 1   MNNLYSEDSDQTTVVGFEVPKSPDSTYNNIYVGSEDEARDPPLVPPHLQHTLLSQPASRD 60

Query: 61  ASGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFYSKYVTVVLYKPVHRRGSSRA 118
           A  TLPLPQNVILNHLFIENRETPRSVVALGFTHRF+SKYVTVVLYKPVHRRGSSRA
Sbjct: 61  AGETLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKPVHRRGSSRA 117

[Close]
BLAST of Tan0006971 vs. ExPASy TrEMBL
Match: A0A0A0KBG3 (AMPKBI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G147560 PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 2.9e-55
Identity = 109/117 (93.16%), Postives = 112/117 (95.73%), Query Frame = 0 

Query: 1   MNNPYSEDSDQTTVVGFEVPKSPDSTYNNVYLGSEDEARDPLLVPPHLQHTLLSHPASRD 60
           MNN YSEDSDQTTVVGFEVPKSPDSTYNN+Y+GSEDEARDP LVPPHLQHTLLS PASRD
Sbjct: 1   MNNLYSEDSDQTTVVGFEVPKSPDSTYNNIYVGSEDEARDPPLVPPHLQHTLLSQPASRD 60

Query: 61  ASGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFYSKYVTVVLYKPVHRRGSSRA 118
           A  TLPLPQNVILNHLFIENRETPRSVVALGFTHRF+SKYVTVVLYKPVHRRGSSRA
Sbjct: 61  AGETLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKPVHRRGSSRA 117

[Close]
BLAST of Tan0006971 vs. ExPASy TrEMBL
Match: A0A6J1CG13 (SNF1-related protein kinase regulatory subunit beta-3 OS=Momordica charantia OX=3673 GN=LOC111011337 PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 4.9e-55
Identity = 107/117 (91.45%), Postives = 110/117 (94.02%), Query Frame = 0 

Query: 1   MNNPYSEDSDQTTVVGFEVPKSPDSTYNNVYLGSEDEARDPLLVPPHLQHTLLSHPASRD 60
           MNNPYSEDSDQTTVVGFEVP SPDSTYNN+YLGSEDEARDP   PPHLQHTLLSHPASRD
Sbjct: 1   MNNPYSEDSDQTTVVGFEVPNSPDSTYNNLYLGSEDEARDPPFAPPHLQHTLLSHPASRD 60

Query: 61  ASGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFYSKYVTVVLYKPVHRRGSSRA 118
           A GTLPLP NVILNHL+IENRETPRSVVALGFTHRF SK+VTVVLYKPVHRRGSSRA
Sbjct: 61  AGGTLPLPHNVILNHLYIENRETPRSVVALGFTHRFRSKFVTVVLYKPVHRRGSSRA 117

[Close]
BLAST of Tan0006971 vs. TAIR 10
Match: AT2G28060.1 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 150.6 bits (379), Expect = 7.8e-37
Identity = 73/115 (63.48%), Postives = 90/115 (78.26%), Query Frame = 0 

Query: 1   MNNPYSEDSDQTTVVGFEVPKSPDSTYNNVYLGSEDEARDPLLVPPHLQHTLLSHPASRD 60
           MN+   +D + TTVVGFEVP SP S+YNNVY  +EDE RDP  VPPHLQH+LL +  S +
Sbjct: 1   MNSQNPDDHEDTTVVGFEVPVSPVSSYNNVYSSTEDETRDPPAVPPHLQHSLLGNQGSME 60

Query: 61  ASGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFYSKYVTVVLYKPVHRRGSS 116
            +     PQNV+LNHL+IENR+ PRSVVALGF+HRF +K+VTVV+YKPV RRGS+
Sbjct: 61  LAYA---PQNVVLNHLYIENRDAPRSVVALGFSHRFRTKFVTVVIYKPVQRRGSA 112

[Close]
BLAST of Tan0006971 vs. TAIR 10
Match: AT4G16360.1 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 114.4 bits (285), Expect = 6.2e-26
Identity = 56/103 (54.37%), Postives = 79/103 (76.70%), Query Frame = 0 

Query: 10  DQTTVVGFEVPKSPDSTYNNVYLGSEDEARDPLLVPPHLQHTLLSHPASR-DASGTLPLP 69
           D  ++ GFE P+SP+++Y+N+ LG+ED +++P +VPPHLQ TLL+ PA+  D    LP P
Sbjct: 157 DIQSISGFEPPQSPENSYSNLLLGAEDYSKEPPVVPPHLQMTLLNLPAANPDIPSPLPRP 216

Query: 70  QNVILNHLFIENRETPRSVVALGFTHRFYSKYVTVVLYKPVHR 112
           Q+VILNHL+++  ++  SVVALG THRF +KYVTVVLYK + R
Sbjct: 217 QHVILNHLYMQKGKSGPSVVALGSTHRFLAKYVTVVLYKSLQR 259

[Close]
BLAST of Tan0006971 vs. TAIR 10
Match: AT4G16360.2 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 114.4 bits (285), Expect = 6.2e-26
Identity = 56/103 (54.37%), Postives = 79/103 (76.70%), Query Frame = 0 

Query: 10  DQTTVVGFEVPKSPDSTYNNVYLGSEDEARDPLLVPPHLQHTLLSHPASR-DASGTLPLP 69
           D  ++ GFE P+SP+++Y+N+ LG+ED +++P +VPPHLQ TLL+ PA+  D    LP P
Sbjct: 156 DIQSISGFEPPQSPENSYSNLLLGAEDYSKEPPVVPPHLQMTLLNLPAANPDIPSPLPRP 215

Query: 70  QNVILNHLFIENRETPRSVVALGFTHRFYSKYVTVVLYKPVHR 112
           Q+VILNHL+++  ++  SVVALG THRF +KYVTVVLYK + R
Sbjct: 216 QHVILNHLYMQKGKSGPSVVALGSTHRFLAKYVTVVLYKSLQR 258

[Close]
BLAST of Tan0006971 vs. TAIR 10
Match: AT4G16360.3 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 114.4 bits (285), Expect = 6.2e-26
Identity = 56/103 (54.37%), Postives = 79/103 (76.70%), Query Frame = 0 

Query: 10  DQTTVVGFEVPKSPDSTYNNVYLGSEDEARDPLLVPPHLQHTLLSHPASR-DASGTLPLP 69
           D  ++ GFE P+SP+++Y+N+ LG+ED +++P +VPPHLQ TLL+ PA+  D    LP P
Sbjct: 159 DIQSISGFEPPQSPENSYSNLLLGAEDYSKEPPVVPPHLQMTLLNLPAANPDIPSPLPRP 218

Query: 70  QNVILNHLFIENRETPRSVVALGFTHRFYSKYVTVVLYKPVHR 112
           Q+VILNHL+++  ++  SVVALG THRF +KYVTVVLYK + R
Sbjct: 219 QHVILNHLYMQKGKSGPSVVALGSTHRFLAKYVTVVLYKSLQR 261

[Close]
BLAST of Tan0006971 vs. TAIR 10
Match: AT5G21170.1 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 103.2 bits (256), Expect = 1.4e-22
Identity = 51/99 (51.52%), Postives = 67/99 (67.68%), Query Frame = 0 

Query: 13  TVVGFEVPKSPDSTYNNVYLGSEDEARDPLLVPPHLQHTLLSHPASRDASGTLPLPQNVI 72
           ++V FE P SPD +Y      +ED A++PL VPP L  TLL    + + +     PQ+V+
Sbjct: 188 SIVEFEAPPSPDHSYGQTLPAAEDYAKEPLAVPPQLHLTLL---GTTEETAIATKPQHVV 247

Query: 73  LNHLFIENRETPRSVVALGFTHRFYSKYVTVVLYKPVHR 112
           LNH+FIE   TP+S+VALG THRF SKY+TVVLYKP+ R
Sbjct: 248 LNHVFIEQGWTPQSIVALGLTHRFESKYITVVLYKPLTR 283

The following BLAST results are available for this feature:
BLAST of Tan0006971 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9ZUU81.1e-3563.48SNF1-related protein kinase regulatory subunit beta-3 OS=Arabidopsis thaliana OX... [more]
Q9SCY58.8e-2554.37SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana OX... [more]
Q84VQ12.0e-2151.52SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana OX... [more]
Q9QZH42.6e-0835.795'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus OX=10116 GN=... [more]
O437419.7e-0834.745'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens OX=9606 GN=PRKAB2... [more]
BLAST of Tan0006971 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022958406.14.6e-5593.04SNF1-related protein kinase regulatory subunit beta-3-like [Cucurbita moschata] ... [more]
XP_004145755.16.0e-5593.16SNF1-related protein kinase regulatory subunit beta-3 [Cucumis sativus] >XP_0084... [more]
XP_022140750.11.0e-5491.45SNF1-related protein kinase regulatory subunit beta-3 [Momordica charantia] >XP_... [more]
XP_022996167.11.3e-5492.17SNF1-related protein kinase regulatory subunit beta-3-like [Cucurbita maxima] >X... [more]
XP_038902942.11.9e-5392.31SNF1-related protein kinase regulatory subunit beta-3 [Benincasa hispida] >XP_03... [more]
BLAST of Tan0006971 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1H1Z82.2e-5593.04SNF1-related protein kinase regulatory subunit beta-3-like OS=Cucurbita moschata... [more]
A0A1S3CP392.9e-5593.16SNF1-related protein kinase regulatory subunit beta-3 OS=Cucumis melo OX=3656 GN... [more]
A0A5A7T1A32.9e-5593.16SNF1-related protein kinase regulatory subunit beta-3 isoform X2 OS=Cucumis melo... [more]
A0A0A0KBG32.9e-5593.16AMPKBI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G147560 PE=3... [more]
A0A6J1CG134.9e-5591.45SNF1-related protein kinase regulatory subunit beta-3 OS=Momordica charantia OX=... [more]
BLAST of Tan0006971 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G28060.17.8e-3763.485'-AMP-activated protein kinase beta-2 subunit protein [more]
AT4G16360.16.2e-2654.375'-AMP-activated protein kinase beta-2 subunit protein [more]
AT4G16360.26.2e-2654.375'-AMP-activated protein kinase beta-2 subunit protein [more]
AT4G16360.36.2e-2654.375'-AMP-activated protein kinase beta-2 subunit protein [more]
AT5G21170.11.4e-2251.525'-AMP-activated protein kinase beta-2 subunit protein [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006828Association with the SNF1 complex (ASC) domainSMARTSM01010AMPKBI_2coord: 20..109
e-value: 1.9E-28
score: 110.5
IPR006828Association with the SNF1 complex (ASC) domainPFAMPF04739AMPKBIcoord: 39..108
e-value: 2.4E-20
score: 72.6
NoneNo IPR availableGENE3D6.20.250.60coord: 13..109
e-value: 8.4E-23
score: 82.4
IPR043554SNF1-related protein kinase regulatory subunit betaPANTHERPTHR46316SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1coord: 1..115
IPR030067SNF1-related protein kinase regulatory subunit beta-3PANTHERPTHR46316:SF5SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-3coord: 1..115
IPR037256ASC domain superfamilySUPERFAMILY160219AMPKBI-likecoord: 12..109

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0006971.1Tan0006971.1mRNA
Tan0006971.2Tan0006971.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043562 cellular response to nitrogen levels
biological_process GO:0009744 response to sucrose
cellular_component GO:0005737 cytoplasm
molecular_function GO:0005515 protein binding