Tan0006966 (gene) Snake gourd v1

Overview


Name	Tan0006966
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Actin-depolymerizing factor
Location	LG11: 6372500 .. 6376544 (-)
RNA-Seq Expression	Tan0006966
Synteny	Tan0006966

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCGAATCTCTCTCTGCACAGCCCTCATTTCCCATCCCATCCTTCTCCTTTCTTCACCCTCGCTTCTATCTTCTTTATCATCTTCGCCTGTGGAAGCCCTAAAATTTCTCAATCTTTCTCGCCTTTTCTTTCGCTTTCTCGCCCCATAATTTTCTCGGCAAAATGGTGAGCATTTCTTCCTCTTCTTTGCTGTCATCTCTTTGGCTTATTTTGGTTGTTTCTTCCTTTTCTTTGTTTGTTAATTTGTTTCTTTAGTTTTCTTCTATTTGTTTCTCCTCGCTGGTTTTCTATTCGATCTTTGGAGTTCTTGGTTGTTTTGAAACGGAATCCTTGTGAATCGCTGCACAGATTACTCGTTGTTCATTTTGGTGCGCTTGTTTATTGTTGATTATGTTGGCATACTAGTGCTTGATCTCTGTTTCTAGTTTATTTTATTGAGGGCCATGCAGTTGTAAGCGAGTGGGTAAAAGCATTGGCCACCATTGATGTAACCCGAAGACTTATTACATTCTCGTACATTTGTTGCAATTTTCGCTTGGACCTTGTGACTGTACTCTGTTTTCAAATTATGGTTATTTCAAGGTTATGTAGTAGTAAATTTGGACTGGTTCTTGTAGGAGGAGGATATACGCATGGGTCCATTCTTTTATCAATCTTTTATTTTATTTTGTAATTTCTCTCTTTTGCACATTAAAGGTGATAATACTGTATGTTTGCTTCATCTCAGTGTTTTAAACATAGGCATTTGTGTTTATGGATATAATTAGTATCTTGAGTTATTTTGCATTGCATGACCTGAAAGAGAGTATGATTCATAAAAAAAATCATATAATTTGGAAAGCTAGGAATGCTTAATGATGAAATTTGAAGGGAAGCATTGAAGGGTGTTGGTTCGGAAAGGAAAACATCAATTTAACTATTTAAGTAGAGGTTTATTATCGTAGTAGTGCATCCCATTTTGTACGTTGCTTTCCTATGGTCATTGTCAAAATTCCTTCCTGAATTTAAGTTATTCCACTTGGGTAGAGTCTATGAGTCGCCCTCTTCTCCCTCATCTGGTTCATCCTATTTGCTCTTCTTTTTTATTTCTTAGTTTGTTTCTCCCTTATCACCATCGCCCTTAGTGTGTGTTTGTTAGGAAATGGGGGCTGGAGACTTGTTGATTTAGACTATAGAGTTGAGCATCAGAATATGAAGGTGTGTTTTGATTAGGAAGTAAAAAGTGGTGGCTTTGGAATTTCAGGGAGGAGCTGGTTAAAATTGTTCTCCTTGACACTAAAGACTAGGGGTTACTGTTGGGTACAATGACAATAAGAAATGAGTATTGAGAAAAAGGATTTTTTTTTGTGGTCTATGTTAGAAATTTTACCAAAGTTTCTGTTCATGCTGTAATGATGAAGGCTCCTTAGTAGGGGAAACTCAAGTAGAAGTTAATTGTGATCCAAACAAAGAACTAGCTCTGGCCCCGACACTACATGTTAGTAGGAGATTCCCCTAGCACTTAGGTGATGCTAATAACTTGAATGGGCTAGTTTTAAGAGATTGATATTTTGCCCTATTCCCCACAGAATGTCAAAGTGAAAAGGATTAGCGGAAAGGACCCTCAAAGAAGAAATCCTTTGATTATAAGGATTGGTGCATCATGAAGAGTAGGGGAGTGGTTTGAAGTCTGGGCCTCCAGAGCCCCTTACATTCCATCTCAAAATTCTCATGGGACGACCTCTTTACACCACATTATTTTTTTTGGATAGGCCTGTCATCTAATTAGAGGCTTATTCAATCACGAAAAAGGTGTTTTTTTTATAGTGTTAATTTTGGGAGGAAGAAAGATCTATTATATACAGATATAACGTGTTATATTAGACTTCTTCTGAAAATACCACCAACTACAACGACAAGGAAGCTAGATTTATTTCTAAGGGTAAGTCCGGATTCACATTTCTCTCTAGGAAAATCTGAGGCAGTTTCTTCATTTAAAGAATTGAAATATTGTAGAACATTGAGTGACTTTGGATCTTTAAATTCGTTGGACGGTTGGGGATAGTATCCTGATGGATGTTTAATAGGGTTTCTGAAGTTCTTTCAGGAACGTCGTCAGATCCAATTGATTGGAGAATTGAATTATTGAAGTGAGCACTGTGCTGGGGTAAGTTCTATATTTGTTTGATTCAGAAAAAAGGTGTAGAAAGTTGGAGAATTTAGGCCTATTAGCCTTGTGTACGTCCTCCTCTTCAAAATTGTCTTCAAGGTGCTTGTAGGAAGAATAAAGAAGTGCATCAAACTTTTATGAGCGCTGATAAGGTGTACCTGACAGGCTGCCCTGGCCAAAGGATCCTCTATATCATCCTTCCCATTTCGAAGTTTCTTCAGGAGCAATATTTGAGATGGATAAAACGACAAAATTTGAAGGAGGAAGCCATTTGATAAAATTGGAAGGTTGTCGCTGAAGCCTTTTCTTTGGGGAACGACTTGGATTAGGGAATATTGAATCCATGGATATGTTGCTCTTATGTTTTAAACTTGTATCTCTAAGTTGCTTTGGAGTGTTTCAAGAGAAAAGGACTTGTTACGTTGGGGACTTGGTTCTTTTACTCTCTCATGCTAGCAATATTTCTAGAAGTCCTTGGTTATAACATTGTCAAATGTAAGTCTCTCTCTCTCTGTCTCTCTGTCTCTCTGTCTCTATCTATCTATACTAGTTTCTTTCCTCCCTTGCCATTTCGGAGATGTTATTTGTCTAAAAAAATTTATAATTACTTCCCCCCCCCCCCCCCCTCCCCTCTAGCTAGTTGGAGATGGACATTTTCTTTTCATACCCCCTCACCCAGGAAAAAATAACAAAGAAAAAAAAGGAATCAGTAATGGCTATTATTACTGCCGTTTGGTGGAGTAATTATATTATTTTGTTGTAGTTTAAAGAAATGAAGCTTCACAGCCCCCAACACTACATTCACACTCCAACCAGGTATCTGTCTATCAAATTTGAGCTGCATGCCCGTGCATTCTAGCAAAGAGGCCGACTTGTAAGAGAAATGGGAAATTGGTTCCACTTCTCCACCATCTCTATCTAGTCTGCTCTGGACTTTTCTATGGTTGGGAATCATGGATACTATGGAGATTTAGATTCTCTGAGTTTATAATTTACATTTTCAAATCAATTTATCACAGGCAAATGCAGCATCAGGGATGGCTGTGCATGATGATTGCAAGCTTAGGTTTCTGGATTTGAAGGCAAAAAGAACCTACCGTTTCATAGTTTTCAAGATTGAGGAAAAACAGAAACAGGTTGTGGTGGAAAAACTTGGCGAGCCATCTCAAAGTTATGAGGATTTTGCTGCCTGTCTTCCAGCTGATGAATGCCGATATGCAGTCTATGATTTCGATTTTGTGACTGAAGAGAATTGCCAGAAGAGCAGGATTATATTCATTGCATGGTAAATGTACTACATAGCCTTTACACTCTCCCACCATCATTTATTATCGATTCCTCGCTCATTTTATAACATGCATTCTGATCTGACTCAAATCATTTATCAACTGCGATGTCTGAAGGTCTCCTGATACATCAAAGGTGAGAAGCAAGATGATTTACGCAAGCTCCAAGGATAGGTTCAAGAGGGAGTTGGATGGCATCCAAGTGGAGTTACAAGCAACTGATCCTACCGAGATGGGGCTTGATGTTATCAGAAGTCGGTCTGGCTGAGTGTAGGATTTGGCCGGTGAGTCATTGTGATGCAGAGCTGGTGGTTGATAGCGTGAAATGTTCATAGATTGTGGGCTCGAAACTTGCTTTTATGCTATGATGATATTGGCTTGTTCTTAAAAGTTTTACCTAAGAGTTTTAAGGATGACTGTGTCTTTGGCTTTCGTGGATTTACTTGGTTGGATTGGATATTTATGTATGGCTGTGGGGTTATGCTGCCGAATACATAAGCAGGTAAATATGGATCAATGCCAGTTTGAGTATATGAGTTTGGTTTTATGAAGAGAACCACTCGGAATAATTTGCAATGATTTTCGAGTTCCATTTTTTTTCTTATTCAAA

mRNA sequence

GTCGAATCTCTCTCTGCACAGCCCTCATTTCCCATCCCATCCTTCTCCTTTCTTCACCCTCGCTTCTATCTTCTTTATCATCTTCGCCTGTGGAAGCCCTAAAATTTCTCAATCTTTCTCGCCTTTTCTTTCGCTTTCTCGCCCCATAATTTTCTCGGCAAAATGTTTAAAGAAATGAAGCTTCACAGCCCCCAACACTACATTCACACTCCAACCAGGCAAATGCAGCATCAGGGATGGCTGTGCATGATGATTGCAAGCTTAGGTTTCTGGATTTGAAGGCAAAAAGAACCTACCGTTTCATAGTTTTCAAGATTGAGGAAAAACAGAAACAGGTTGTGGTGGAAAAACTTGGCGAGCCATCTCAAAGTTATGAGGATTTTGCTGCCTGTCTTCCAGCTGATGAATGCCGATATGCAGTCTATGATTTCGATTTTGTGACTGAAGAGAATTGCCAGAAGAGCAGGATTATATTCATTGCATGGTCTCCTGATACATCAAAGGTGAGAAGCAAGATGATTTACGCAAGCTCCAAGGATAGGTTCAAGAGGGAGTTGGATGGCATCCAAGTGGAGTTACAAGCAACTGATCCTACCGAGATGGGGCTTGATGTTATCAGAAGTCGGTCTGGCTGAGTGTAGGATTTGGCCGGTGAGTCATTGTGATGCAGAGCTGGTGGTTGATAGCGTGAAATGTTCATAGATTGTGGGCTCGAAACTTGCTTTTATGCTATGATGATATTGGCTTGTTCTTAAAAGTTTTACCTAAGAGTTTTAAGGATGACTGTGTCTTTGGCTTTCGTGGATTTACTTGGTTGGATTGGATATTTATGTATGGCTGTGGGGTTATGCTGCCGAATACATAAGCAGGTAAATATGGATCAATGCCAGTTTGAGTATATGAGTTTGGTTTTATGAAGAGAACCACTCGGAATAATTTGCAATGATTTTCGAGTTCCATTTTTTTTCTTATTCAAA

Coding sequence (CDS)

ATGGCTGTGCATGATGATTGCAAGCTTAGGTTTCTGGATTTGAAGGCAAAAAGAACCTACCGTTTCATAGTTTTCAAGATTGAGGAAAAACAGAAACAGGTTGTGGTGGAAAAACTTGGCGAGCCATCTCAAAGTTATGAGGATTTTGCTGCCTGTCTTCCAGCTGATGAATGCCGATATGCAGTCTATGATTTCGATTTTGTGACTGAAGAGAATTGCCAGAAGAGCAGGATTATATTCATTGCATGGTCTCCTGATACATCAAAGGTGAGAAGCAAGATGATTTACGCAAGCTCCAAGGATAGGTTCAAGAGGGAGTTGGATGGCATCCAAGTGGAGTTACAAGCAACTGATCCTACCGAGATGGGGCTTGATGTTATCAGAAGTCGGTCTGGCTGA

Protein sequence

MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAACLPADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVIRSRSG

Homology

[Close]

BLAST of Tan0006966 vs. ExPASy Swiss-Prot
Match: Q9FVI1 (Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 2.7e-62
Identity = 115/132 (87.12%), Postives = 127/132 (96.21%), Query Frame = 0


Query: 1   MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAACLPADECRY 60
           MAVHDDCKL+FL+LKAKRTYRFI++KIEEKQK+VVVEKLGEP++SYEDF A LPADECRY
Sbjct: 8   MAVHDDCKLKFLELKAKRTYRFIIYKIEEKQKEVVVEKLGEPTESYEDFTAGLPADECRY 67

Query: 61  AVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
           AVYDFDF+T+EN QKSRI FIAWSPDT++VRSKMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 68  AVYDFDFMTKENHQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPT 127

Query: 121 EMGLDVIRSRSG 133
           EMGLDV RSR+G
Sbjct: 128 EMGLDVFRSRAG 139

[Close]

BLAST of Tan0006966 vs. ExPASy Swiss-Prot
Match: Q39250 (Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 1.7e-61
Identity = 113/131 (86.26%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 1   MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAACLPADECRY 60
           MAVHDDCKLRFL+LKAKRT+RFIV+KIEEKQKQVVVEK+G+P Q+YE+FAACLPADECRY
Sbjct: 8   MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPADECRY 67

Query: 61  AVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
           A+YDFDFVT ENCQKS+I FIAW PD +KVRSKMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 68  AIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVELQATDPT 127

Query: 121 EMGLDVIRSRS 132
           EM LDV RSR+
Sbjct: 128 EMDLDVFRSRA 138

[Close]

BLAST of Tan0006966 vs. ExPASy Swiss-Prot
Match: Q9FVI2 (Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 2.3e-61
Identity = 114/131 (87.02%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAACLPADECRY 60
           MAVHDDCKLRFL+LKAKRT+RFIV+KIEEKQKQVVVEK+GEP++SYEDFAA LP +ECRY
Sbjct: 8   MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKIGEPTESYEDFAASLPENECRY 67

Query: 61  AVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
           AVYDFDFVT ENCQKSRI FIAW PDT++VRSKMIYASSKDRFKRELDGIQVELQA DPT
Sbjct: 68  AVYDFDFVTAENCQKSRIFFIAWCPDTARVRSKMIYASSKDRFKRELDGIQVELQACDPT 127

Query: 121 EMGLDVIRSRS 132
           EMGLDVI+SR+
Sbjct: 128 EMGLDVIQSRA 138

[Close]

BLAST of Tan0006966 vs. ExPASy Swiss-Prot
Match: Q9ZSK3 (Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2)

HSP 1 Score: 231.9 bits (590), Expect = 4.2e-60
Identity = 111/130 (85.38%), Postives = 122/130 (93.85%), Query Frame = 0


Query: 1   MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAACLPADECRY 60
           MAVHDDCKLRFL+LKAKRT+RFIV+KIEEKQKQV+VEK+GEP  +YEDFAA LPADECRY
Sbjct: 8   MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLPADECRY 67

Query: 61  AVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
           A+YDFDFVT ENCQKS+I FIAW PD +KVRSKMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 68  AIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPT 127

Query: 121 EMGLDVIRSR 131
           EM LDV++SR
Sbjct: 128 EMDLDVLKSR 137

[Close]

BLAST of Tan0006966 vs. ExPASy Swiss-Prot
Match: Q0DLA3 (Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF7 PE=3 SV=2)

HSP 1 Score: 225.3 bits (573), Expect = 4.0e-58
Identity = 106/131 (80.92%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 1   MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAACLPADECRY 60
           MAV D+CKL+FL+LKAKRTYRFI++KI+EK+K VVVEK+GEP  +Y+DFAA LPA+ECRY
Sbjct: 8   MAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLPANECRY 67

Query: 61  AVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
           A++D+DFVTEENCQKS+I FIAWSPDTS+VRSKMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 68  AIFDYDFVTEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVELQATDPT 127

Query: 121 EMGLDVIRSRS 132
           E+GLDVIR R+
Sbjct: 128 EVGLDVIRGRA 138

[Close]

BLAST of Tan0006966 vs. NCBI nr
Match: XP_022922159.1 (actin-depolymerizing factor 2 [Cucurbita moschata] >XP_022990483.1 actin-depolymerizing factor 2 [Cucurbita maxima] >KAG6602360.1 Actin-depolymerizing factor 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033039.1 Actin-depolymerizing factor 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 261.9 bits (668), Expect = 2.9e-66
Identity = 130/132 (98.48%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 1   MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAACLPADECRY 60
           MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAA LPADECRY
Sbjct: 8   MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASLPADECRY 67

Query: 61  AVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
           AVYDFDFVTEENCQKSRIIFIAWSPDTS+VRSKMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 68  AVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVELQATDPT 127

Query: 121 EMGLDVIRSRSG 133
           EMGLDVIRSRSG
Sbjct: 128 EMGLDVIRSRSG 139

[Close]

BLAST of Tan0006966 vs. NCBI nr
Match: XP_023534804.1 (actin-depolymerizing factor 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 260.4 bits (664), Expect = 8.5e-66
Identity = 129/132 (97.73%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 1   MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAACLPADECRY 60
           MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLG+PSQSYEDFAA LPADECRY
Sbjct: 8   MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSQSYEDFAASLPADECRY 67

Query: 61  AVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
           AVYDFDFVTEENCQKSRIIFIAWSPDTS+VRSKMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 68  AVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVELQATDPT 127

Query: 121 EMGLDVIRSRSG 133
           EMGLDVIRSRSG
Sbjct: 128 EMGLDVIRSRSG 139

[Close]

BLAST of Tan0006966 vs. NCBI nr
Match: KAA0066026.1 (actin-depolymerizing factor 2 isoform X1 [Cucumis melo var. makuwa] >TYK05818.1 actin-depolymerizing factor 2 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 260.4 bits (664), Expect = 8.5e-66
Identity = 129/132 (97.73%), Postives = 130/132 (98.48%), Query Frame = 0


Query: 1   MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAACLPADECRY 60
           MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPS+SYEDF A LPADECRY
Sbjct: 1   MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSESYEDFTASLPADECRY 60

Query: 61  AVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
           AVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 61  AVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPT 120

Query: 121 EMGLDVIRSRSG 133
           EMGLDVIRSRSG
Sbjct: 121 EMGLDVIRSRSG 132

[Close]

BLAST of Tan0006966 vs. NCBI nr
Match: XP_008463478.1 (PREDICTED: actin-depolymerizing factor 2 isoform X1 [Cucumis melo] >XP_008463479.1 PREDICTED: actin-depolymerizing factor 2 isoform X2 [Cucumis melo])

HSP 1 Score: 260.4 bits (664), Expect = 8.5e-66
Identity = 129/132 (97.73%), Postives = 130/132 (98.48%), Query Frame = 0


Query: 1   MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAACLPADECRY 60
           MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPS+SYEDF A LPADECRY
Sbjct: 8   MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSESYEDFTASLPADECRY 67

Query: 61  AVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
           AVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 68  AVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPT 127

Query: 121 EMGLDVIRSRSG 133
           EMGLDVIRSRSG
Sbjct: 128 EMGLDVIRSRSG 139

[Close]

BLAST of Tan0006966 vs. NCBI nr
Match: XP_038891099.1 (actin-depolymerizing factor 2 [Benincasa hispida])

HSP 1 Score: 260.0 bits (663), Expect = 1.1e-65
Identity = 129/132 (97.73%), Postives = 130/132 (98.48%), Query Frame = 0


Query: 1   MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAACLPADECRY 60
           MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDF A LPADECRY
Sbjct: 8   MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFTASLPADECRY 67

Query: 61  AVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
           AVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDP+
Sbjct: 68  AVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPS 127

Query: 121 EMGLDVIRSRSG 133
           EMGLDVIRSRSG
Sbjct: 128 EMGLDVIRSRSG 139

[Close]

BLAST of Tan0006966 vs. ExPASy TrEMBL
Match: A0A6J1JTE7 (actin-depolymerizing factor 2 OS=Cucurbita maxima OX=3661 GN=LOC111487332 PE=3 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.4e-66
Identity = 130/132 (98.48%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 1   MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAACLPADECRY 60
           MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAA LPADECRY
Sbjct: 8   MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASLPADECRY 67

Query: 61  AVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
           AVYDFDFVTEENCQKSRIIFIAWSPDTS+VRSKMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 68  AVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVELQATDPT 127

Query: 121 EMGLDVIRSRSG 133
           EMGLDVIRSRSG
Sbjct: 128 EMGLDVIRSRSG 139

[Close]

BLAST of Tan0006966 vs. ExPASy TrEMBL
Match: A0A6J1E2L4 (actin-depolymerizing factor 2 OS=Cucurbita moschata OX=3662 GN=LOC111430219 PE=3 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.4e-66
Identity = 130/132 (98.48%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 1   MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAACLPADECRY 60
           MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAA LPADECRY
Sbjct: 8   MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASLPADECRY 67

Query: 61  AVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
           AVYDFDFVTEENCQKSRIIFIAWSPDTS+VRSKMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 68  AVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVELQATDPT 127

Query: 121 EMGLDVIRSRSG 133
           EMGLDVIRSRSG
Sbjct: 128 EMGLDVIRSRSG 139

[Close]

BLAST of Tan0006966 vs. ExPASy TrEMBL
Match: A0A1S3CJB1 (actin-depolymerizing factor 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501640 PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.1e-66
Identity = 129/132 (97.73%), Postives = 130/132 (98.48%), Query Frame = 0


Query: 1   MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAACLPADECRY 60
           MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPS+SYEDF A LPADECRY
Sbjct: 8   MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSESYEDFTASLPADECRY 67

Query: 61  AVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
           AVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 68  AVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPT 127

Query: 121 EMGLDVIRSRSG 133
           EMGLDVIRSRSG
Sbjct: 128 EMGLDVIRSRSG 139

[Close]

BLAST of Tan0006966 vs. ExPASy TrEMBL
Match: A0A5A7VI42 (Actin-depolymerizing factor 2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G003280 PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.1e-66
Identity = 129/132 (97.73%), Postives = 130/132 (98.48%), Query Frame = 0


Query: 1   MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAACLPADECRY 60
           MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPS+SYEDF A LPADECRY
Sbjct: 1   MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSESYEDFTASLPADECRY 60

Query: 61  AVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
           AVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 61  AVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPT 120

Query: 121 EMGLDVIRSRSG 133
           EMGLDVIRSRSG
Sbjct: 121 EMGLDVIRSRSG 132

[Close]

BLAST of Tan0006966 vs. ExPASy TrEMBL
Match: A0A6J1K1F6 (actin-depolymerizing factor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111489270 PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.2e-65
Identity = 129/132 (97.73%), Postives = 130/132 (98.48%), Query Frame = 0


Query: 1   MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAACLPADECRY 60
           MAVHDDCKLRFLDLKAKRT+RFIVFKIEEK KQVVVEKLGEPSQSYEDFAA LPADECRY
Sbjct: 8   MAVHDDCKLRFLDLKAKRTFRFIVFKIEEKLKQVVVEKLGEPSQSYEDFAASLPADECRY 67

Query: 61  AVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
           AVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 68  AVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPT 127

Query: 121 EMGLDVIRSRSG 133
           EMGLDVIRSRSG
Sbjct: 128 EMGLDVIRSRSG 139

[Close]

BLAST of Tan0006966 vs. TAIR 10
Match: AT3G46010.1 (actin depolymerizing factor 1 )

HSP 1 Score: 236.5 bits (602), Expect = 1.2e-62
Identity = 113/131 (86.26%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 1   MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAACLPADECRY 60
           MAVHDDCKLRFL+LKAKRT+RFIV+KIEEKQKQVVVEK+G+P Q+YE+FAACLPADECRY
Sbjct: 8   MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPADECRY 67

Query: 61  AVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
           A+YDFDFVT ENCQKS+I FIAW PD +KVRSKMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 68  AIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVELQATDPT 127

Query: 121 EMGLDVIRSRS 132
           EM LDV RSR+
Sbjct: 128 EMDLDVFRSRA 138

[Close]

BLAST of Tan0006966 vs. TAIR 10
Match: AT3G46010.2 (actin depolymerizing factor 1 )

HSP 1 Score: 236.5 bits (602), Expect = 1.2e-62
Identity = 113/131 (86.26%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 1   MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAACLPADECRY 60
           MAVHDDCKLRFL+LKAKRT+RFIV+KIEEKQKQVVVEK+G+P Q+YE+FAACLPADECRY
Sbjct: 19  MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPADECRY 78

Query: 61  AVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
           A+YDFDFVT ENCQKS+I FIAW PD +KVRSKMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 79  AIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVELQATDPT 138

Query: 121 EMGLDVIRSRS 132
           EM LDV RSR+
Sbjct: 139 EMDLDVFRSRA 149

[Close]

BLAST of Tan0006966 vs. TAIR 10
Match: AT5G59890.1 (actin depolymerizing factor 4 )

HSP 1 Score: 231.9 bits (590), Expect = 3.0e-61
Identity = 111/130 (85.38%), Postives = 122/130 (93.85%), Query Frame = 0


Query: 1   MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAACLPADECRY 60
           MAVHDDCKLRFL+LKAKRT+RFIV+KIEEKQKQV+VEK+GEP  +YEDFAA LPADECRY
Sbjct: 8   MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLPADECRY 67

Query: 61  AVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
           A+YDFDFVT ENCQKS+I FIAW PD +KVRSKMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 68  AIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPT 127

Query: 121 EMGLDVIRSR 131
           EM LDV++SR
Sbjct: 128 EMDLDVLKSR 137

[Close]

BLAST of Tan0006966 vs. TAIR 10
Match: AT5G59890.2 (actin depolymerizing factor 4 )

HSP 1 Score: 231.9 bits (590), Expect = 3.0e-61
Identity = 111/130 (85.38%), Postives = 122/130 (93.85%), Query Frame = 0


Query: 1   MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAACLPADECRY 60
           MAVHDDCKLRFL+LKAKRT+RFIV+KIEEKQKQV+VEK+GEP  +YEDFAA LPADECRY
Sbjct: 1   MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLPADECRY 60

Query: 61  AVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
           A+YDFDFVT ENCQKS+I FIAW PD +KVRSKMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 61  AIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPT 120

Query: 121 EMGLDVIRSR 131
           EM LDV++SR
Sbjct: 121 EMDLDVLKSR 130

[Close]

BLAST of Tan0006966 vs. TAIR 10
Match: AT3G46000.1 (actin depolymerizing factor 2 )

HSP 1 Score: 224.2 bits (570), Expect = 6.3e-59
Identity = 107/131 (81.68%), Postives = 121/131 (92.37%), Query Frame = 0


Query: 1   MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAACLPADECRY 60
           MAVHDDCKL+F++LKAKRT+R IV+KIE+  KQV+VEKLGEP QSY+DFAA LPAD+CRY
Sbjct: 8   MAVHDDCKLKFMELKAKRTFRTIVYKIED--KQVIVEKLGEPEQSYDDFAASLPADDCRY 67

Query: 61  AVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
            +YDFDFVT ENCQKS+I FIAWSPDT+KVR KMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 68  CIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVELQATDPT 127

Query: 121 EMGLDVIRSRS 132
           EMGLDV +SR+
Sbjct: 128 EMGLDVFKSRT 136

The following BLAST results are available for this feature:

BLAST of Tan0006966 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FVI1	2.7e-62	87.12	Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1	[more]
Q39250	1.7e-61	86.26	Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1	[more]
Q9FVI2	2.3e-61	87.02	Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1	[more]
Q9ZSK3	4.2e-60	85.38	Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2	[more]
Q0DLA3	4.0e-58	80.92	Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF7 P...	[more]

BLAST of Tan0006966 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022922159.1	2.9e-66	98.48	actin-depolymerizing factor 2 [Cucurbita moschata] >XP_022990483.1 actin-depolym...	[more]
XP_023534804.1	8.5e-66	97.73	actin-depolymerizing factor 2 [Cucurbita pepo subsp. pepo]	[more]
KAA0066026.1	8.5e-66	97.73	actin-depolymerizing factor 2 isoform X1 [Cucumis melo var. makuwa] >TYK05818.1 ...	[more]
XP_008463478.1	8.5e-66	97.73	PREDICTED: actin-depolymerizing factor 2 isoform X1 [Cucumis melo] >XP_008463479...	[more]
XP_038891099.1	1.1e-65	97.73	actin-depolymerizing factor 2 [Benincasa hispida]	[more]

BLAST of Tan0006966 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JTE7	1.4e-66	98.48	actin-depolymerizing factor 2 OS=Cucurbita maxima OX=3661 GN=LOC111487332 PE=3 S...	[more]
A0A6J1E2L4	1.4e-66	98.48	actin-depolymerizing factor 2 OS=Cucurbita moschata OX=3662 GN=LOC111430219 PE=3...	[more]
A0A1S3CJB1	4.1e-66	97.73	actin-depolymerizing factor 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501640...	[more]
A0A5A7VI42	4.1e-66	97.73	Actin-depolymerizing factor 2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A6J1K1F6	1.2e-65	97.73	actin-depolymerizing factor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111489270 P...	[more]

BLAST of Tan0006966 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46010.1	1.2e-62	86.26	actin depolymerizing factor 1	[more]
AT3G46010.2	1.2e-62	86.26	actin depolymerizing factor 1	[more]
AT5G59890.1	3.0e-61	85.38	actin depolymerizing factor 4	[more]
AT5G59890.2	3.0e-61	85.38	actin depolymerizing factor 4	[more]
AT3G46000.1	6.3e-59	81.68	actin depolymerizing factor 2	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002108	Actin-depolymerising factor homology domain	SMART	SM00102	adf_2	coord: 5..132 e-value: 3.9E-59 score: 212.4
IPR002108	Actin-depolymerising factor homology domain	PFAM	PF00241	Cofilin_ADF	coord: 7..129 e-value: 1.4E-37 score: 128.2
IPR002108	Actin-depolymerising factor homology domain	PROSITE	PS51263	ADF_H	coord: 1..132 score: 38.876068
IPR029006	ADF-H/Gelsolin-like domain superfamily	GENE3D	3.40.20.10	Severin	coord: 1..132 e-value: 7.0E-50 score: 170.9
IPR017904	ADF/Cofilin	PANTHER	PTHR11913	COFILIN-RELATED	coord: 1..131
IPR017904	ADF/Cofilin	CDD	cd11286	ADF_cofilin_like	coord: 1..130 e-value: 2.37447E-63 score: 187.764
None	No IPR available	PANTHER	PTHR11913:SF74	ACTIN-DEPOLYMERIZING FACTOR 2-LIKE	coord: 1..131
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 1..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0006966.1	Tan0006966.1	mRNA
Tan0006966.2	Tan0006966.2	mRNA
Tan0006966.3	Tan0006966.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030042	actin filament depolymerization
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003779	actin binding