
Tan0006673 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCCCCCCCTTTCTCCCCTATTTATATATATATCCTCTCTGTTTTGGATCATTTTTGTAAGAACCAAAAAAAAAAAAAAGTTATGTCTTCGATGATGAACTCACAGGGGATGGCTCTGGCCACCGCCATGGCTGCCGTCTCCGGCACTGTAATTCTTCTGTCTTTTTGCATCCAAAAATCCATCCCAATTCACCAAACTCACCACTTCTCTCCTCCAACTCTTCGCTCTTGTATCTCTTCTGGTACGTTTTCGAAAAACCCATGAATTTCCTCTACTTTTTTTTTTAACTTTTGAGCTAATTGTTTCTGCAATTGATCGGTTTTCAGAGACGAGGAAGAAGAAGAAGAAGCAGAATCAGAAAAAGAAGGTTCATTTTGCAAAGGATGTTGTGGATCCAATTGGGAACGGCGAAGATTTTCGACGGCAACACGAAATCGCCGCCGCTTCACCGCCGCAAAAGGTCCCCGGAGACAGAGGAATGCCGGCGAACAGAGTGGCCCTTTACAACGGGATTTTGAGAGATCGCGTCGTTCATCGATACGCTTACTCTTGTTGAATTCACTTCGAAATTAATTCTCCTCTTTAATTTTTCTGTACAAAATTCAAGTTCCGGCGAAATTGTATATACAATTTTTCTCTTCTCTCTACCTTACTTGCTTGTTGAATTGATCAGACGAATTTTAATTATTGGGTGTTAATTAAAATCTAATAATTTTTGAATGAATGAAGAATGAAAGAGGA CTCCCCCCCTTTCTCCCCTATTTATATATATATCCTCTCTGTTTTGGATCATTTTTGTAAGAACCAAAAAAAAAAAAAAGTTATGTCTTCGATGATGAACTCACAGGGGATGGCTCTGGCCACCGCCATGGCTGCCGTCTCCGGCACTGTAATTCTTCTGTCTTTTTGCATCCAAAAATCCATCCCAATTCACCAAACTCACCACTTCTCTCCTCCAACTCTTCGCTCTTGTATCTCTTCTGAGACGAGGAAGAAGAAGAAGAAGCAGAATCAGAAAAAGAAGGTTCATTTTGCAAAGGATGTTGTGGATCCAATTGGGAACGGCGAAGATTTTCGACGGCAACACGAAATCGCCGCCGCTTCACCGCCGCAAAAGGTCCCCGGAGACAGAGGAATGCCGGCGAACAGAGTGGCCCTTTACAACGGGATTTTGAGAGATCGCGTCGTTCATCGATACGCTTACTCTTGTTGAATTCACTTCGAAATTAATTCTCCTCTTTAATTTTTCTGTACAAAATTCAAGTTCCGGCGAAATTGTATATACAATTTTTCTCTTCTCTCTACCTTACTTGCTTGTTGAATTGATCAGACGAATTTTAATTATTGGGTGTTAATTAAAATCTAATAATTTTTGAATGAATGAAGAATGAAAGAGGA ATGTCTTCGATGATGAACTCACAGGGGATGGCTCTGGCCACCGCCATGGCTGCCGTCTCCGGCACTGTAATTCTTCTGTCTTTTTGCATCCAAAAATCCATCCCAATTCACCAAACTCACCACTTCTCTCCTCCAACTCTTCGCTCTTGTATCTCTTCTGAGACGAGGAAGAAGAAGAAGAAGCAGAATCAGAAAAAGAAGGTTCATTTTGCAAAGGATGTTGTGGATCCAATTGGGAACGGCGAAGATTTTCGACGGCAACACGAAATCGCCGCCGCTTCACCGCCGCAAAAGGTCCCCGGAGACAGAGGAATGCCGGCGAACAGAGTGGCCCTTTACAACGGGATTTTGAGAGATCGCGTCGTTCATCGATACGCTTACTCTTGTTGA MSSMMNSQGMALATAMAAVSGTVILLSFCIQKSIPIHQTHHFSPPTLRSCISSETRKKKKKQNQKKKVHFAKDVVDPIGNGEDFRRQHEIAAASPPQKVPGDRGMPANRVALYNGILRDRVVHRYAYSC Homology
BLAST of Tan0006673 vs. NCBI nr
Match: XP_022971983.1 (uncharacterized protein LOC111470637 [Cucurbita maxima]) HSP 1 Score: 219.9 bits (559), Expect = 1.2e-53 Identity = 115/131 (87.79%), Postives = 120/131 (91.60%), Query Frame = 0
BLAST of Tan0006673 vs. NCBI nr
Match: XP_022933375.1 (uncharacterized protein LOC111440802 [Cucurbita moschata]) HSP 1 Score: 219.2 bits (557), Expect = 2.1e-53 Identity = 115/131 (87.79%), Postives = 119/131 (90.84%), Query Frame = 0
BLAST of Tan0006673 vs. NCBI nr
Match: XP_023531515.1 (uncharacterized protein LOC111793727 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 219.2 bits (557), Expect = 2.1e-53 Identity = 115/131 (87.79%), Postives = 119/131 (90.84%), Query Frame = 0
BLAST of Tan0006673 vs. NCBI nr
Match: KAG7021784.1 (hypothetical protein SDJN02_15511 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 218.8 bits (556), Expect = 2.8e-53 Identity = 115/132 (87.12%), Postives = 119/132 (90.15%), Query Frame = 0
BLAST of Tan0006673 vs. NCBI nr
Match: KAG6587898.1 (hypothetical protein SDJN03_16463, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 200.3 bits (508), Expect = 1.0e-47 Identity = 106/124 (85.48%), Postives = 112/124 (90.32%), Query Frame = 0
BLAST of Tan0006673 vs. ExPASy TrEMBL
Match: A0A6J1I8J7 (uncharacterized protein LOC111470637 OS=Cucurbita maxima OX=3661 GN=LOC111470637 PE=4 SV=1) HSP 1 Score: 219.9 bits (559), Expect = 6.0e-54 Identity = 115/131 (87.79%), Postives = 120/131 (91.60%), Query Frame = 0
BLAST of Tan0006673 vs. ExPASy TrEMBL
Match: A0A6J1F4Q3 (uncharacterized protein LOC111440802 OS=Cucurbita moschata OX=3662 GN=LOC111440802 PE=4 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 1.0e-53 Identity = 115/131 (87.79%), Postives = 119/131 (90.84%), Query Frame = 0
BLAST of Tan0006673 vs. ExPASy TrEMBL
Match: A0A0A0LWV6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G342430 PE=4 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 2.1e-46 Identity = 110/139 (79.14%), Postives = 116/139 (83.45%), Query Frame = 0
BLAST of Tan0006673 vs. ExPASy TrEMBL
Match: A0A5A7U994 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001310 PE=4 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 4.6e-46 Identity = 109/139 (78.42%), Postives = 115/139 (82.73%), Query Frame = 0
BLAST of Tan0006673 vs. ExPASy TrEMBL
Match: A0A1S3B9B6 (uncharacterized protein LOC103487448 OS=Cucumis melo OX=3656 GN=LOC103487448 PE=4 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 4.6e-46 Identity = 109/139 (78.42%), Postives = 115/139 (82.73%), Query Frame = 0
BLAST of Tan0006673 vs. TAIR 10
Match: AT1G52565.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15760.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 73.9 bits (180), Expect = 1.0e-13 Identity = 52/121 (42.98%), Postives = 75/121 (61.98%), Query Frame = 0
BLAST of Tan0006673 vs. TAIR 10
Match: AT3G15760.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52565.1); Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 71.2 bits (173), Expect = 6.7e-13 Identity = 60/135 (44.44%), Postives = 74/135 (54.81%), Query Frame = 0
BLAST of Tan0006673 vs. TAIR 10
Match: AT2G35850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52360.1); Has 42 Blast hits to 42 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 44.3 bits (103), Expect = 8.7e-05 Identity = 26/69 (37.68%), Postives = 40/69 (57.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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