Tan0006589 (gene) Snake gourd v1

Overview


Name	Tan0006589
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like
Location	LG01: 8426873 .. 8430169 (+)
RNA-Seq Expression	Tan0006589
Synteny	Tan0006589

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGACCATCTTGCTCGATGGGTGTGATTTTGAGCACTGGCTTGTTGTCATGGAGAAGCCAGAGGGGGGAACCCACGAGGGACGAGATTATTGACAGCCATATCAAAACGCTTGCCATGGTCGTCGTGTCGGTAGGTGAAGTTTCTTTTTGGTGAATCTCTCCTATTTTTTTTTTCACCTACGCAGTGGGACTGTTTACCTCTGATTATGTCAATTATCAATGAATCTTTAGAAAAACAATGATCAAGTGCCGACTGTTTATAAGCACAATCTGAAATTGTAATAAGAGATGGAATTTGAGAGATCTGATTAGAATTGTGGGTCACGTTCACTACAGGTACTATTTTGTTCTATTAGTTCCTTCACCTGAGGATAATTTTGCAGTATATTGAGTGTCTATGTGATAAACGGTATATGTAACTATTCGGGTCTTTGATTTTTACTGCATTTCCCTATTTGGTGTATCTTATCGTTACAGTGAGAAAGAAGCTAGGATGAAGATATACTCTGTTACAACTAGGTGCTTCTTTGCATTTGGGTGCCTGGTTTCTGAAGAACTTTCTTACAAGATCAAAGGTATACCTTTATGCCTTGTTTTCTTTTGTTTCTTTGTGTTTGTTATTTCTTTCTTTTGTGTTTGATTGTACTTGTACTAAGTTGTACCTTTTCCTCCTCGGAGCTGCCTAGGGTTCGTTGGGTCCTTCCTGATTCATACTTGGATGTTAAGAATAAAGATTATGGAGGTAATTCCTTTTCTTGTTAAGTTAAGAAAATTAGCATTTTTACTTATTTCATTGTCTAATTTTACTGTTGCTTTCCATATCCTCAACCTTTAGCCTGTAAGTAGAGGTCAATTGAATATTCCTGGTCTGGAGGTGGAAATGGGATTCTATGTAAGGCATTTTGTAGGCTAATATGTCAACAATATAGTGGTTTTATTTCAATTTAAAGTTGCTAGAAGTTAAATTGAAGTACTTGCAGACAAGACCGATCTTTTTACTGTAATATTGTCATAATATTAACATTAGACCATATGGAATTATAAATCTATACCTTTTTACCAGAAAATAAGTAGTAAAATATGCAATTTGAAGTAGGAGCTTCTCTCTGTAAGAAAATAAAGACTATAGAGGAAGTGGGTACTTCCCTCTCTGTTGAAAGTAGTTACGCTCTCGTATGATGGTTTAGGATCCTGTTTCATTCAGGTATCATTCTTAAGATGTGTAAAAAGCTAAGAACTGTATATGAGATTATAATGCACTCCTGCTGGACTGTCAGCAAATTGAGCATTTCAATGAAAGCTCTAATCTTAAAGTTTCTCATCCTTACACCAGGCAAACTACGTTGGAAAGCTCTTATTTCTTGCCAAGAATCTATGGTCAGTTGTAAAGCCAGTATTTTTCTGTTGTAACTTGTAATGGGCTTCCTTGTCTTTTGGAGAACTCATTAAACGGTGTTCTGTTGGTTCACTTCTTAAGGCTAAAACTATTTTGCCGCTTGGTATAGGAGTTGTACAGAACTATTATCTGCTTTTCTGCATTTTTGTTGGGCCTGTGGCGGGGAGCCTTTTATAAACGAACAAGCTGTTCCATATGACCTGAAGTACCATGAGGAATGGATTAGAAACAATGCTCGAGCTAATAAGAGGAATAGGGCGCAATGACAGACCTCGTAATTTTGACAGGTCAAGAAATTTTGAGAGGAGGGAAAATATGCAAAGCAGAGAATTCCCAAATGCTTCTGCAAATCAGCCTGCTGGACCAAACATGAGTGGACCAGCTCCAAGTAATATGCCTTCCAACAACTTTAGCGGCAGTATGCCACCTCACAACCATGCTGGAATGCCCCAAGGCAACTATCCGGGAGCACCACCACTGCCCCCAAACAACTTCAGCAAACCACCGCCACCACCACCGAACAACTTTAGTGGACCACCGCCACGCAACTATGCACCACCACGACCATTCAACTCCGGGGCAGCACCACCACACAACTTTGGAGGGCCACAACAAAACAACTATGGAGGGCCACAGCCAAACAACCGTTGGGGAGCACCACCAAACAACTATGGCAGACCTTCAACCTCCAGTGGGTCGCCTCCACAAAACAGTTATGGAGAGATGCAGCCTAATGCTGGTGGATGGTCTAGTAATGTGCATAACAATCCACGAGGTTAGTCATCAGCTGGTCAGGAAAGTCTCAAACTTGCGCAATTCATTAGTTGTTTGGATTTACTCGCAGCTTCGTTCAAACCTCAAATTAACCCTACTGGTCACTGAGCATGTGTTGTGGTGCTTCAGATAATGAGTTTAGTTTTGCTTTCTGGGTAGGCCATATGCTAATTTAATGATAGTACGGTACCTGTGAGTTGGGTTTATATATATACATATATATATTATTTGTTTATAAATTGTCACTTATGTTTCAAGTCATTTAACCATAAGGATATGGAAATTGAAAGAAGTAAGGTAGTCTTTATTCATTTACTCTCAGGGAAATGAAGCCTTCTCTCTCCTACTTATCCTGTCCTTGCCCGCCCCCATCTTAATAACCTATCATTTGGATTTGGGGAATGAAGATATTCTCATCTTCTATTCTCTGTTATGTACATATTTTTCTCATGCGTAATATCTGTTTCTTATCCTGAACGCTACCATTTGTACTGCCAGTTTATCCACTTACTCTTTTTTTTTTTTAACAACAGTTTATCCCCTTAACTCATAATGTGTGGCCTAAAAATGTCAGATGTTTTGAGAATGTTGGTTTCATATTAGTTTAAAAATGCCTTTATAATGTGAAAGTTTTGGTTACATCTGCCGCATTTCCTTTGAGCTATGTTAACCATCTTTATTTAAATTTCCCTTTTTATTATTAGACGATTCTTTTAACAAATTGTTTGAATTATTTTTCTTTGGCTTAGCATGACCTTTTCCTGTATGATTGAGTGTAGTGATGAAGTTAGTTAAATGGGTTTCTGATTCAGGTTTTGATGCTTGTTGGGCGCAGATGCTTTATGTGATCTGGTGATTGCGTTGATTGCAGACTGTAATTCTGGTTTGTTGAATGCATTAACTTCGCTTGTGGTCTTTGGGGTTGTTCGTTCATACTTAACACCGCGTGTGCAAGAGTAGACACATAAATATGAGTGCACACATAATTTTCATAGGGTGACAACTAAGTATTATTTCATTGATTGCTTTGTTTTGGGTTGTGTATGAGATCATTGATTGTTTGATGTTTGTGAAAATTTTAAGAGAGTGAAGCAACTACTGCCATTTTTAATCTTTGGATTTTT

mRNA sequence

ATGGAGACCATCTTGCTCGATGGGTGTGATTTTGAGCACTGGCTTGTTAAAGAAGCTAGGATGAAGATATACTCTGTTACAACTAGGTGCTTCTTTGCATTTGGGTGCCTGGTTTCTGAAGAACTTTCTTACAAGATCAAAGGTATACCTTTATGCCTTCTGCCTAGGGTTCGTTGGGTCCTTCCTGATTCATACTTGGATGTTAAGAATAAAGATTATGGAGAACTATTATCTGCTTTTCTGCATTTTTGTTGGGCCTGTGGCGGGGAGCCTTTTATAAACGAACAAGCTGTTCCATATGACCTGAAGTACCATGAGGAATGGATTAGAAACAATGCTCGAGCTAATAAGAGGAATAGGGCAAATTTTGAGAGGAGGGAAAATATGCAAAGCAGAGAATTCCCAAATGCTTCTGCAAATCAGCCTGCTGGACCAAACATGAGTGGACCAGCTCCAAGTAATATGCCTTCCAACAACTTTAGCGGCAGTATGCCACCTCACAACCATGCTGGAATGCCCCAAGGCAACTATCCGGGAGCACCACCACTGCCCCCAAACAACTTCAGCAAACCACCGCCACCACCACCGAACAACTTTAGTGGACCACCGCCACGCAACTATGCACCACCACGACCATTCAACTCCGGGGCAGCACCACCACACAACTTTGGAGGGCCACAACAAAACAACTATGGAGGGCCACAGCCAAACAACCGTTGGGGAGCACCACCAAACAACTATGGCAGACCTTCAACCTCCAGTGGGTCGCCTCCACAAAACAGTTATGGAGAGATGCAGCCTAATGCTGGTGGATGGTCTAGTAATGTGCATAACAATCCACGAGGTTTTGATGCTTGTTGGGCGCAGATGCTTTATGTGATCTGGTGATTGCGTTGATTGCAGACTGTAATTCTGGTTTGTTGAATGCATTAACTTCGCTTGTGGTCTTTGGGGTTGTTCGTTCATACTTAACACCGCGTGTGCAAGAGTAGACACATAAATATGAGTGCACACATAATTTTCATAGGGTGACAACTAAGTATTATTTCATTGATTGCTTTGTTTTGGGTTGTGTATGAGATCATTGATTGTTTGATGTTTGTGAAAATTTTAAGAGAGTGAAGCAACTACTGCCATTTTTAATCTTTGGATTTTT

Coding sequence (CDS)

ATGGAGACCATCTTGCTCGATGGGTGTGATTTTGAGCACTGGCTTGTTAAAGAAGCTAGGATGAAGATATACTCTGTTACAACTAGGTGCTTCTTTGCATTTGGGTGCCTGGTTTCTGAAGAACTTTCTTACAAGATCAAAGGTATACCTTTATGCCTTCTGCCTAGGGTTCGTTGGGTCCTTCCTGATTCATACTTGGATGTTAAGAATAAAGATTATGGAGAACTATTATCTGCTTTTCTGCATTTTTGTTGGGCCTGTGGCGGGGAGCCTTTTATAAACGAACAAGCTGTTCCATATGACCTGAAGTACCATGAGGAATGGATTAGAAACAATGCTCGAGCTAATAAGAGGAATAGGGCAAATTTTGAGAGGAGGGAAAATATGCAAAGCAGAGAATTCCCAAATGCTTCTGCAAATCAGCCTGCTGGACCAAACATGAGTGGACCAGCTCCAAGTAATATGCCTTCCAACAACTTTAGCGGCAGTATGCCACCTCACAACCATGCTGGAATGCCCCAAGGCAACTATCCGGGAGCACCACCACTGCCCCCAAACAACTTCAGCAAACCACCGCCACCACCACCGAACAACTTTAGTGGACCACCGCCACGCAACTATGCACCACCACGACCATTCAACTCCGGGGCAGCACCACCACACAACTTTGGAGGGCCACAACAAAACAACTATGGAGGGCCACAGCCAAACAACCGTTGGGGAGCACCACCAAACAACTATGGCAGACCTTCAACCTCCAGTGGGTCGCCTCCACAAAACAGTTATGGAGAGATGCAGCCTAATGCTGGTGGATGGTCTAGTAATGTGCATAACAATCCACGAGGTTTTGATGCTTGTTGGGCGCAGATGCTTTATGTGATCTGGTGA

Protein sequence

METILLDGCDFEHWLVKEARMKIYSVTTRCFFAFGCLVSEELSYKIKGIPLCLLPRVRWVLPDSYLDVKNKDYGELLSAFLHFCWACGGEPFINEQAVPYDLKYHEEWIRNNARANKRNRANFERRENMQSREFPNASANQPAGPNMSGPAPSNMPSNNFSGSMPPHNHAGMPQGNYPGAPPLPPNNFSKPPPPPPNNFSGPPPRNYAPPRPFNSGAAPPHNFGGPQQNNYGGPQPNNRWGAPPNNYGRPSTSSGSPPQNSYGEMQPNAGGWSSNVHNNPRGFDACWAQMLYVIW

Homology

[Close]

BLAST of Tan0006589 vs. ExPASy Swiss-Prot
Match: Q9LKA5 (Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF8 PE=1 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 5.0e-53
Identity = 147/311 (47.27%), Postives = 166/311 (53.38%), Query Frame = 0


Query: 2   ETILLDGCDFEHWLV-----------------------------KEARMKIYSVTTRCFF 61
           ETILLDGCDFEHWLV                              EARMKIYSV+TRC++
Sbjct: 88  ETILLDGCDFEHWLVVVEPPQGEPTRDEIIDSYIKTLAQIVGSEDEARMKIYSVSTRCYY 147

Query: 62  AFGCLVSEELSYKIKGIPLCLLPRVRWVLPDSYLDVKNKDYGELLSAFLHFCWACGGEPF 121
           AFG LVSE+LS+K+K      L  VRWVLPDSYLDV+NKDY              GGEPF
Sbjct: 148 AFGALVSEDLSHKLKE-----LSNVRWVLPDSYLDVRNKDY--------------GGEPF 207

Query: 122 INEQAVPYDLKYHEEWIRNNARANKRNRANFERRENMQSREFPNASANQPAGPNMSGPAP 181
           I+ +AVPYD KYHEEWIRNNARAN+RNR N   R N +SR F     N   GP    P  
Sbjct: 208 IDGKAVPYDPKYHEEWIRNNARANERNRRNDRPRNNDRSRNFERRRENMAGGPPPQRPPM 267

Query: 182 SN-MPSNNFSGSMPPHNHAGMPQGNYPGAPPLPPNNFSKPPPPPPNNFSGP--PPRNYAP 241
               P  +  GS PP  H G       G+ P PP+      PPPPNN  GP  PP   AP
Sbjct: 268 GGPPPPPHIGGSAPPPPHMG-------GSAPPPPHMGQNYGPPPPNNMGGPRHPPPYGAP 327

Query: 242 PRPFNSGAAPPHNFGGPQQNNYGG-PQPNNRWGAPPNNYGRPSTSSGSPPQNSYGEMQPN 280
           P+    G  PP N+GG    NYGG P  NN  GAPP NYG      G PPQ  YG + P 
Sbjct: 328 PQNNMGGPRPPQNYGGTPPPNYGGAPPANNMGGAPPPNYG-----GGPPPQ--YGAVPPP 365

[Close]

BLAST of Tan0006589 vs. ExPASy Swiss-Prot
Match: Q9CAH0 (Multiple organellar RNA editing factor 7, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF7 PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.8e-18
Identity = 48/136 (35.29%), Postives = 71/136 (52.21%), Query Frame = 0


Query: 5   LLDGCDFEHWLV-----------------------------KEARMKIYSVTTRCFFAFG 64
           L++GCD++HWLV                             +EA+  IYSV+T+ ++AFG
Sbjct: 48  LVEGCDYKHWLVLMKPPNGYPTRNHIVQSFVETLAMALGSEEEAKRSIYSVSTKYYYAFG 107

Query: 65  CLVSEELSYKIKGIPLCLLPRVRWVLPDSYLDVKNKDYGELLSAFLHFCWACGGEPFINE 112
           C + E L+YKI+      LP V+WVLPDS++   +  Y              GGEPF++ 
Sbjct: 108 CRIHEPLTYKIRS-----LPDVKWVLPDSFIVDGDNRY--------------GGEPFVDG 164

[Close]

BLAST of Tan0006589 vs. ExPASy Swiss-Prot
Match: Q84JZ6 (Multiple organellar RNA editing factor 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF3 PE=1 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 4.5e-17
Identity = 64/174 (36.78%), Postives = 81/174 (46.55%), Query Frame = 0


Query: 2   ETILLDGCDFEHWLV-----------------------------KEARMKIYSVTTRCFF 61
           ETILLDGCD+EHWL+                             +EA+ KIYSV T  + 
Sbjct: 85  ETILLDGCDYEHWLIVMEFTDPKPTEEEMINSYVKTLTSVLGCEEEAKKKIYSVCTSTYT 144

Query: 62  AFGCLVSEELSYKIKGIPLCLLPRVRWVLPDSYLDVKNKDYGELLSAFLHFCWACGGEPF 121
            FG L+SEELS K+K      LP V WVLPDSYLDV NKDY              GG+ +
Sbjct: 145 GFGALISEELSCKVKA-----LPGVLWVLPDSYLDVPNKDY--------------GGDLY 204

Query: 122 INEQAVPYDLKYHEEWIRNNARANKRNRANFERRENMQ-SREFPNASANQPAGP 146
           +  + +P       E  + + R   R R +  RRE MQ  R  P+   + P  P
Sbjct: 205 VEGKVIPRPQYRFTE--QRHTRPRPRPRYD-RRRETMQVERREPSMGLHSPVNP 236

[Close]

BLAST of Tan0006589 vs. ExPASy Swiss-Prot
Match: Q9LPZ1 (Multiple organellar RNA editing factor 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MORF9 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.5e-14
Identity = 54/171 (31.58%), Postives = 76/171 (44.44%), Query Frame = 0


Query: 2   ETILLDGCDFEHWLV------------------------------KEARMKIYSVTTRCF 61
           ETI+L GCD+ HWL+                              +EA+  +Y+ +T  +
Sbjct: 78  ETIMLPGCDYNHWLIVMEFPKDPAPSRDQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTY 137

Query: 62  FAFGCLVSEELSYKIKGIPLCLLPRVRWVLPDSYLDVKNKDYGELLSAFLHFCWACGGEP 121
             F C + EE S K KG     LP V WVLPDSY+DVKNKDY              GG+ 
Sbjct: 138 TGFQCTIDEETSEKFKG-----LPGVLWVLPDSYIDVKNKDY--------------GGDK 197

Query: 122 FINEQAVPYDLKYHEEWIRNN----ARANKRNRANFERRENMQSREFPNAS 139
           +IN + +P     ++   RNN    ++  +R R      E  + R+ P AS
Sbjct: 198 YINGEIIPCTYPTYQPKQRNNTKYQSKRYERKRDGPPPPEQRKPRQEPAAS 229

[Close]

BLAST of Tan0006589 vs. ExPASy Swiss-Prot
Match: Q38732 (DAG protein, chloroplastic OS=Antirrhinum majus OX=4151 GN=DAG PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.3e-13
Identity = 50/171 (29.24%), Postives = 78/171 (45.61%), Query Frame = 0


Query: 2   ETILLDGCDFEHWLV------------------------------KEARMKIYSVTTRCF 61
           ETI+L GCD+ HWL+                              +EA+  +Y+ +T  +
Sbjct: 77  ETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTY 136

Query: 62  FAFGCLVSEELSYKIKGIPLCLLPRVRWVLPDSYLDVKNKDYGELLSAFLHFCWACGGEP 121
             F C V+EE S K KG     LP V WVLPDSY+DVKNKDY              GG+ 
Sbjct: 137 TGFQCTVTEETSEKFKG-----LPGVLWVLPDSYIDVKNKDY--------------GGDK 196

Query: 122 FINEQAVPYDLKYHEEWIRNNARANKRNRANFERRENMQSREFPNASANQP 143
           ++N + +P     ++      +R++K     ++ +  ++ R+ P A   +P
Sbjct: 197 YVNGEIIPCQYPTYQP---KQSRSSK-----YKSKAYVRQRDGPPAEQRRP 220

[Close]

BLAST of Tan0006589 vs. NCBI nr
Match: XP_022984464.1 (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X2 [Cucurbita maxima])

HSP 1 Score: 356.3 bits (913), Expect = 2.5e-94
Identity = 214/344 (62.21%), Postives = 222/344 (64.53%), Query Frame = 0


Query: 2   ETILLDGCDFEHWLV-----------------------------KEARMKIYSVTTRCFF 61
           ETILLDGCDFEHWLV                             +EARMKIYSV+TRC+F
Sbjct: 92  ETILLDGCDFEHWLVVMEKPEGDPTRDEIIDSYIKTLAMVIGSEEEARMKIYSVSTRCYF 151

Query: 62  AFGCLVSEELSYKIKGIPLCLLPRVRWVLPDSYLDVKNKDYGELLSAFLHFCWACGGEPF 121
           AFGCLVSEELSYKIK      LP+VRWVLPDSYLDVKNKDY              GGEPF
Sbjct: 152 AFGCLVSEELSYKIKE-----LPKVRWVLPDSYLDVKNKDY--------------GGEPF 211

Query: 122 INEQAVPYDLKYHEEWIRNNARANKRNR-----------ANFE-RRENMQSREFPNASAN 181
           IN QAVPYD KYHEEWIRNNARAN+RN+            NFE RRENMQSREFPNAS N
Sbjct: 212 INGQAVPYDPKYHEEWIRNNARANERNKRNDRPRNFDRSRNFERRRENMQSREFPNASPN 271

Query: 182 QPAGPNMSGPAPSNMPSNNFSGSMPPHNHAGMPQGNYPGA-PPLPPNNFS---------- 241
           QP GPNMS PAPSNMP NNF+  MPP N  GMPQGNY G  PP PPNNFS          
Sbjct: 272 QPTGPNMSPPAPSNMPPNNFNAGMPPQNRGGMPQGNYAGGPPPPPPNNFSGPPPPPHNYA 331

Query: 242 -KPPPPPPNNFSGP-----------PPRNYAPPRPFNSGAAPPHNFGGPQQNNYGGPQPN 279
             PPPPPPNNF GP           PPRNYAPP P +SGAAPPH        NYGGPQPN
Sbjct: 332 GGPPPPPPNNFGGPPPPPLNNYAGQPPRNYAPPPPPHSGAAPPH--------NYGGPQPN 391

[Close]

BLAST of Tan0006589 vs. NCBI nr
Match: XP_038889853.1 (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like [Benincasa hispida])

HSP 1 Score: 351.7 bits (901), Expect = 6.3e-93
Identity = 209/348 (60.06%), Postives = 228/348 (65.52%), Query Frame = 0


Query: 2   ETILLDGCDFEHWLV-----------------------------KEARMKIYSVTTRCFF 61
           ETILLDGCDFEHWLV                             +EARMKIYSV+TRC+F
Sbjct: 304 ETILLDGCDFEHWLVVMEKPEENLTRDEIIDSYIKTLAMVVGSEEEARMKIYSVSTRCYF 363

Query: 62  AFGCLVSEELSYKIKGIPLCLLPRVRWVLPDSYLDVKNKDYGELLSAFLHFCWACGGEPF 121
           AFGCLVSEELSYKIK      LP+VRWVLPDSYLDVKNKDY              GGEPF
Sbjct: 364 AFGCLVSEELSYKIKE-----LPKVRWVLPDSYLDVKNKDY--------------GGEPF 423

Query: 122 INEQAVPYDLKYHEEWIRNNARANKRNR-----------ANFE-RRENMQSREFPNASAN 181
           IN QAVPYD KYHEEWIRNNARAN+RNR            NFE RR+NMQ+REFPNAS N
Sbjct: 424 INGQAVPYDPKYHEEWIRNNARANERNRRNDRPRNFDRSRNFERRRDNMQNREFPNASTN 483

Query: 182 QPAGPNMSGPAPSNMPSNNFSGSMPPHNHAGMPQGNYPGAP--------PLPPNNFSKPP 241
           QP GPNMS PAPS+MP  +FS SMPPHNHAGMPQGNYPG P        P PP+NF+ PP
Sbjct: 484 QPTGPNMSPPAPSSMPPKDFSPSMPPHNHAGMPQGNYPGGPPPLNNFNKPPPPHNFNGPP 543

Query: 242 PPPP-NNFSGPPP----RNY---------------APPRPFNSGAAPPHNFGGPQQNNYG 280
           PPPP NNF+GPPP     N+               +PP P N+ A PP N GG   +N+G
Sbjct: 544 PPPPRNNFNGPPPPPPLNNFNGPPSPPPPNFNGPPSPPPPRNNYAPPPPNPGGAPPHNFG 603

[Close]

BLAST of Tan0006589 vs. NCBI nr
Match: KAG7015044.1 (Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 350.1 bits (897), Expect = 1.8e-92
Identity = 209/341 (61.29%), Postives = 219/341 (64.22%), Query Frame = 0


Query: 2   ETILLDGCDFEHWLV-----------------------------KEARMKIYSVTTRCFF 61
           ETILLDGCDFEHWLV                             +EARMKIYSV+TRC+F
Sbjct: 92  ETILLDGCDFEHWLVVMEKPEGDPTRDEIIDSYIKTLAMVIGSEEEARMKIYSVSTRCYF 151

Query: 62  AFGCLVSEELSYKIKGIPLCLLPRVRWVLPDSYLDVKNKDYGELLSAFLHFCWACGGEPF 121
           AFGCLVSEELSYKIK      LP+VRWVLPDSYLDVKNKDY              GGEPF
Sbjct: 152 AFGCLVSEELSYKIKE-----LPKVRWVLPDSYLDVKNKDY--------------GGEPF 211

Query: 122 INEQAVPYDLKYHEEWIRNNARANKRNR-----------ANFE-RRENMQSREFPNASAN 181
           IN QAVPYD KYHEEWIRNNARAN+RN+            NFE RRENMQSREFPNAS N
Sbjct: 212 INGQAVPYDPKYHEEWIRNNARANERNKRNDRPRNFDRSRNFERRRENMQSREFPNASPN 271

Query: 182 QPAGPNMSGPAPSNMPSNNFSGSMPPHNHAGMPQGNYPGA-PPLPPNNFS---------- 241
           QP GPNMS PAPSNMP NNF+  MPP N  GMPQGNY G  PP PPNNFS          
Sbjct: 272 QPTGPNMSPPAPSNMPPNNFNAGMPPQNRGGMPQGNYAGGPPPPPPNNFSGPPPPHNYAG 331

Query: 242 KPPPPPPNNFSGP-----------PPRNYAPPRPFNSGAAPPHNFGGPQQNNYGGPQPNN 279
            PPPPPPNNF GP           PPRNYAPP P +SG APPHN+GGPQ NNY G     
Sbjct: 332 GPPPPPPNNFGGPPPPPLNNYAGQPPRNYAPPPPPHSGPAPPHNYGGPQPNNYWG----- 391

[Close]

BLAST of Tan0006589 vs. NCBI nr
Match: KAG6577022.1 (Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 346.7 bits (888), Expect = 2.0e-91
Identity = 209/341 (61.29%), Postives = 219/341 (64.22%), Query Frame = 0


Query: 2   ETILLDGCDFEHWLV-----------------------------KEARMKIYSVTTRCFF 61
           ETILLDGCDFEHWLV                             +EARMKIYSV+TRC+F
Sbjct: 92  ETILLDGCDFEHWLVVMEKPEGDPTRDEIIDSYIKTLAMVIGSEEEARMKIYSVSTRCYF 151

Query: 62  AFGCLVSEELSYKIKGIPLCLLPRVRWVLPDSYLDVKNKDYGELLSAFLHFCWACGGEPF 121
           AFGCLVSEELSYKIK      LP+VRWVLPDSYLDVKNKDY              GGEPF
Sbjct: 152 AFGCLVSEELSYKIKE-----LPKVRWVLPDSYLDVKNKDY--------------GGEPF 211

Query: 122 INEQAVPYDLKYHEEWIRNNARANKRNR-----------ANFE-RRENMQSREFPNASAN 181
           IN QAVPYD KYHEEWIRNNARAN+RN+            NFE RRENMQSREFPNAS N
Sbjct: 212 INGQAVPYDPKYHEEWIRNNARANERNKRNDRPRNFDRSRNFERRRENMQSREFPNASPN 271

Query: 182 QPAGPNMSGPAPSNMPSNNFSGSMPPHNHAGMPQGNYPGA-PPLPPNNFS---------- 241
           QP GPNMS PAPSNMP NNF+  MPP N  GMPQGNY G  PP PPNNFS          
Sbjct: 272 QPTGPNMSPPAPSNMPPNNFNAGMPPQNRGGMPQGNYAGGPPPPPPNNFSGPPPPHNYAG 331

Query: 242 KPPPPPPNNFSGP-----------PPRNYAPPRPFNSGAAPPHNFGGPQQNNYGGPQPNN 279
            PPPPPPNNF GP           PPRNYAPP P +SG APPHN+GGPQ NNY G     
Sbjct: 332 GPPPPPPNNFGGPPPPPLNNYAGQPPRNYAPPPP-HSGPAPPHNYGGPQPNNYWG----- 391

[Close]

BLAST of Tan0006589 vs. NCBI nr
Match: XP_022984463.1 (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X1 [Cucurbita maxima])

HSP 1 Score: 346.3 bits (887), Expect = 2.6e-91
Identity = 215/374 (57.49%), Postives = 223/374 (59.63%), Query Frame = 0


Query: 2   ETILLDGCDFEHWLV-----------------------------KEARMKIYSVTTRCFF 61
           ETILLDGCDFEHWLV                             +EARMKIYSV+TRC+F
Sbjct: 92  ETILLDGCDFEHWLVVMEKPEGDPTRDEIIDSYIKTLAMVIGSEEEARMKIYSVSTRCYF 151

Query: 62  AFGCLVSEELSYKIKGIPLCLLPRVRWVLPDSYLDVKNKDYGELLSAFLHFCWACGGEPF 121
           AFGCLVSEELSYKIK      LP+VRWVLPDSYLDVKNKDY              GGEPF
Sbjct: 152 AFGCLVSEELSYKIKE-----LPKVRWVLPDSYLDVKNKDY--------------GGEPF 211

Query: 122 INEQAVPYDLKYHEEWIRNNARANKRNR-----------ANFE-RRENMQSREFPNASAN 181
           IN QAVPYD KYHEEWIRNNARAN+RN+            NFE RRENMQSREFPNAS N
Sbjct: 212 INGQAVPYDPKYHEEWIRNNARANERNKRNDRPRNFDRSRNFERRRENMQSREFPNASPN 271

Query: 182 QPAGPNMSGPAPSNMPSNNFSGSMPPHNHAGMPQGNYPG-----------APPLPPNNFS 241
           QP GPNMS PAPSNMP NNF+  MPP N  GMPQGNY G            PP PPNNFS
Sbjct: 272 QPTGPNMSPPAPSNMPPNNFNAGMPPQNRGGMPQGNYAGGPPPPPPNNFSGPPPPPNNFS 331

Query: 242 KP---------PPPPPNNFSGP---------------------------------PPRNY 279
            P         PPPPPNNFSGP                                 PPRNY
Sbjct: 332 GPPPPPNNFSGPPPPPNNFSGPPPPPHNYAGGPPPPPPNNFGGPPPPPLNNYAGQPPRNY 391

[Close]

BLAST of Tan0006589 vs. ExPASy TrEMBL
Match: A0A6J1JAK6 (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482761 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 1.2e-94
Identity = 214/344 (62.21%), Postives = 222/344 (64.53%), Query Frame = 0


Query: 2   ETILLDGCDFEHWLV-----------------------------KEARMKIYSVTTRCFF 61
           ETILLDGCDFEHWLV                             +EARMKIYSV+TRC+F
Sbjct: 92  ETILLDGCDFEHWLVVMEKPEGDPTRDEIIDSYIKTLAMVIGSEEEARMKIYSVSTRCYF 151

Query: 62  AFGCLVSEELSYKIKGIPLCLLPRVRWVLPDSYLDVKNKDYGELLSAFLHFCWACGGEPF 121
           AFGCLVSEELSYKIK      LP+VRWVLPDSYLDVKNKDY              GGEPF
Sbjct: 152 AFGCLVSEELSYKIKE-----LPKVRWVLPDSYLDVKNKDY--------------GGEPF 211

Query: 122 INEQAVPYDLKYHEEWIRNNARANKRNR-----------ANFE-RRENMQSREFPNASAN 181
           IN QAVPYD KYHEEWIRNNARAN+RN+            NFE RRENMQSREFPNAS N
Sbjct: 212 INGQAVPYDPKYHEEWIRNNARANERNKRNDRPRNFDRSRNFERRRENMQSREFPNASPN 271

Query: 182 QPAGPNMSGPAPSNMPSNNFSGSMPPHNHAGMPQGNYPGA-PPLPPNNFS---------- 241
           QP GPNMS PAPSNMP NNF+  MPP N  GMPQGNY G  PP PPNNFS          
Sbjct: 272 QPTGPNMSPPAPSNMPPNNFNAGMPPQNRGGMPQGNYAGGPPPPPPNNFSGPPPPPHNYA 331

Query: 242 -KPPPPPPNNFSGP-----------PPRNYAPPRPFNSGAAPPHNFGGPQQNNYGGPQPN 279
             PPPPPPNNF GP           PPRNYAPP P +SGAAPPH        NYGGPQPN
Sbjct: 332 GGPPPPPPNNFGGPPPPPLNNYAGQPPRNYAPPPPPHSGAAPPH--------NYGGPQPN 391

[Close]

BLAST of Tan0006589 vs. ExPASy TrEMBL
Match: A0A6J1JAJ8 (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482761 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 1.3e-91
Identity = 215/374 (57.49%), Postives = 223/374 (59.63%), Query Frame = 0


Query: 2   ETILLDGCDFEHWLV-----------------------------KEARMKIYSVTTRCFF 61
           ETILLDGCDFEHWLV                             +EARMKIYSV+TRC+F
Sbjct: 92  ETILLDGCDFEHWLVVMEKPEGDPTRDEIIDSYIKTLAMVIGSEEEARMKIYSVSTRCYF 151

Query: 62  AFGCLVSEELSYKIKGIPLCLLPRVRWVLPDSYLDVKNKDYGELLSAFLHFCWACGGEPF 121
           AFGCLVSEELSYKIK      LP+VRWVLPDSYLDVKNKDY              GGEPF
Sbjct: 152 AFGCLVSEELSYKIKE-----LPKVRWVLPDSYLDVKNKDY--------------GGEPF 211

Query: 122 INEQAVPYDLKYHEEWIRNNARANKRNR-----------ANFE-RRENMQSREFPNASAN 181
           IN QAVPYD KYHEEWIRNNARAN+RN+            NFE RRENMQSREFPNAS N
Sbjct: 212 INGQAVPYDPKYHEEWIRNNARANERNKRNDRPRNFDRSRNFERRRENMQSREFPNASPN 271

Query: 182 QPAGPNMSGPAPSNMPSNNFSGSMPPHNHAGMPQGNYPG-----------APPLPPNNFS 241
           QP GPNMS PAPSNMP NNF+  MPP N  GMPQGNY G            PP PPNNFS
Sbjct: 272 QPTGPNMSPPAPSNMPPNNFNAGMPPQNRGGMPQGNYAGGPPPPPPNNFSGPPPPPNNFS 331

Query: 242 KP---------PPPPPNNFSGP---------------------------------PPRNY 279
            P         PPPPPNNFSGP                                 PPRNY
Sbjct: 332 GPPPPPNNFSGPPPPPNNFSGPPPPPHNYAGGPPPPPPNNFGGPPPPPLNNYAGQPPRNY 391

[Close]

BLAST of Tan0006589 vs. ExPASy TrEMBL
Match: A0A6J1E5B5 (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430715 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 1.3e-91
Identity = 205/335 (61.19%), Postives = 217/335 (64.78%), Query Frame = 0


Query: 2   ETILLDGCDFEHWLV-----------------------------KEARMKIYSVTTRCFF 61
           ETILLDGCDFEHWLV                             +EARMKIYSV+TRC+F
Sbjct: 92  ETILLDGCDFEHWLVVMEKPEGDPTRDEIIDSYIKTLAMVIGSEEEARMKIYSVSTRCYF 151

Query: 62  AFGCLVSEELSYKIKGIPLCLLPRVRWVLPDSYLDVKNKDYGELLSAFLHFCWACGGEPF 121
           AFGCLVSEELSYKIK      LP+VRWVLPDSYLDVKNKDY              GGEPF
Sbjct: 152 AFGCLVSEELSYKIKE-----LPKVRWVLPDSYLDVKNKDY--------------GGEPF 211

Query: 122 INEQAVPYDLKYHEEWIRNNARANKRNR-----------ANFE-RRENMQSREFPNASAN 181
           IN QAVPYD KYHEEWIRNNARAN+RN+            NFE RRENMQSREFPNAS N
Sbjct: 212 INGQAVPYDPKYHEEWIRNNARANERNKRNDRPRNFDRSRNFERRRENMQSREFPNASPN 271

Query: 182 QPAGPNMSGPAPSNMPSNNFSGSMPPHNHAGMPQGNYPG-----------APPLPPNNFS 241
           QP GPNMS PAPSNMP NNF+  M P N  GMPQGNY G            PP PPNNF 
Sbjct: 272 QPTGPNMSPPAPSNMPPNNFNAGMSPQNRGGMPQGNYAGGPPPPPPNNFSGPPPPPNNFG 331

Query: 242 KPPPPPPNNFSGPPPRNYA-----PPRPFNSGAAPPHNFGGPQQNNYGGPQPNNRWGAPP 279
            PPPPP NN++G PPRNYA     PP P +SG APPHN+GGPQ NNY G       G PP
Sbjct: 332 GPPPPPLNNYAGQPPRNYAPPPPPPPPPPHSGPAPPHNYGGPQPNNYWG-------GPPP 391

[Close]

BLAST of Tan0006589 vs. ExPASy TrEMBL
Match: A0A6J1CPB1 (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111012864 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 4.8e-91
Identity = 207/356 (58.15%), Postives = 220/356 (61.80%), Query Frame = 0


Query: 2   ETILLDGCDFEHWLV-----------------------------KEARMKIYSVTTRCFF 61
           ETILLDGCDFEHWLV                             +EARMKIYSV+TRC+F
Sbjct: 92  ETILLDGCDFEHWLVVMEKPEGEPTRDEIIDSYIKTLSMVVGSEEEARMKIYSVSTRCYF 151

Query: 62  AFGCLVSEELSYKIKGIPLCLLPRVRWVLPDSYLDVKNKDYGELLSAFLHFCWACGGEPF 121
           AFGCLVSEELSYKIK      LP+VRWVLPDSYLDVKNKDY              GGEPF
Sbjct: 152 AFGCLVSEELSYKIKE-----LPKVRWVLPDSYLDVKNKDY--------------GGEPF 211

Query: 122 INEQAVPYDLKYHEEWIRNNARANKRNR-----------ANFE-RRENMQSREFPNASAN 181
           IN QAVPYD KYHEEWIRNNARAN+RNR            NFE RRENMQ+R+FPNAS N
Sbjct: 212 INGQAVPYDPKYHEEWIRNNARANERNRRNDRPRNFDRSRNFERRRENMQNRDFPNASGN 271

Query: 182 QPAGPNMSGPAPSNMPSNNFSGSMPPHNHAGMPQGNYP---------GAPPLPPNNFSKP 241
           QP GPNM G  PSNMP NNF+   PP NH GMP  NY          G PP PPNN+   
Sbjct: 272 QPTGPNMGGGPPSNMPPNNFAPPPPPQNHGGMPSSNYAPPPPPNNWGGPPPPPPNNYRGG 331

Query: 242 PPPPPNNFSG---------------------PPPRNYA----PPRPFNSGAAPPHNFGGP 280
           PPPPPNNF G                     PPPRNYA    PP P NSG APP N+GGP
Sbjct: 332 PPPPPNNFEGAPPPRNYAGAPPPPLNNFEGAPPPRNYAGAPPPPPPSNSGPAPPRNYGGP 391

[Close]

BLAST of Tan0006589 vs. ExPASy TrEMBL
Match: A0A6J1EA12 (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430715 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.8e-90
Identity = 209/347 (60.23%), Postives = 219/347 (63.11%), Query Frame = 0


Query: 2   ETILLDGCDFEHWLV-----------------------------KEARMKIYSVTTRCFF 61
           ETILLDGCDFEHWLV                             +EARMKIYSV+TRC+F
Sbjct: 92  ETILLDGCDFEHWLVVMEKPEGDPTRDEIIDSYIKTLAMVIGSEEEARMKIYSVSTRCYF 151

Query: 62  AFGCLVSEELSYKIKGIPLCLLPRVRWVLPDSYLDVKNKDYGELLSAFLHFCWACGGEPF 121
           AFGCLVSEELSYKIK      LP+VRWVLPDSYLDVKNKDY              GGEPF
Sbjct: 152 AFGCLVSEELSYKIKE-----LPKVRWVLPDSYLDVKNKDY--------------GGEPF 211

Query: 122 INEQAVPYDLKYHEEWIRNNARANKRNR-----------ANFE-RRENMQSREFPNASAN 181
           IN QAVPYD KYHEEWIRNNARAN+RN+            NFE RRENMQSREFPNAS N
Sbjct: 212 INGQAVPYDPKYHEEWIRNNARANERNKRNDRPRNFDRSRNFERRRENMQSREFPNASPN 271

Query: 182 QPAGPNMSGPAPSNMPSNNFSGSMPPHNHAGMPQGNYPGA-PPLPPNNFS---------- 241
           QP GPNMS PAPSNMP NNF+  M P N  GMPQGNY G  PP PPNNFS          
Sbjct: 272 QPTGPNMSPPAPSNMPPNNFNAGMSPQNRGGMPQGNYAGGPPPPPPNNFSGPPPPPHNYA 331

Query: 242 -KPPPPPPNNFSGP-----------PPRNYA-----PPRPFNSGAAPPHNFGGPQQNNYG 279
             PPPPPPNNF GP           PPRNYA     PP P +SG APPHN+GGPQ NNY 
Sbjct: 332 GGPPPPPPNNFGGPPPPPLNNYAGQPPRNYAPPPPPPPPPPHSGPAPPHNYGGPQPNNYW 391

[Close]

BLAST of Tan0006589 vs. TAIR 10
Match: AT3G15000.1 (cobalt ion binding )

HSP 1 Score: 209.5 bits (532), Expect = 3.6e-54
Identity = 147/311 (47.27%), Postives = 166/311 (53.38%), Query Frame = 0


Query: 2   ETILLDGCDFEHWLV-----------------------------KEARMKIYSVTTRCFF 61
           ETILLDGCDFEHWLV                              EARMKIYSV+TRC++
Sbjct: 88  ETILLDGCDFEHWLVVVEPPQGEPTRDEIIDSYIKTLAQIVGSEDEARMKIYSVSTRCYY 147

Query: 62  AFGCLVSEELSYKIKGIPLCLLPRVRWVLPDSYLDVKNKDYGELLSAFLHFCWACGGEPF 121
           AFG LVSE+LS+K+K      L  VRWVLPDSYLDV+NKDY              GGEPF
Sbjct: 148 AFGALVSEDLSHKLKE-----LSNVRWVLPDSYLDVRNKDY--------------GGEPF 207

Query: 122 INEQAVPYDLKYHEEWIRNNARANKRNRANFERRENMQSREFPNASANQPAGPNMSGPAP 181
           I+ +AVPYD KYHEEWIRNNARAN+RNR N   R N +SR F     N   GP    P  
Sbjct: 208 IDGKAVPYDPKYHEEWIRNNARANERNRRNDRPRNNDRSRNFERRRENMAGGPPPQRPPM 267

Query: 182 SN-MPSNNFSGSMPPHNHAGMPQGNYPGAPPLPPNNFSKPPPPPPNNFSGP--PPRNYAP 241
               P  +  GS PP  H G       G+ P PP+      PPPPNN  GP  PP   AP
Sbjct: 268 GGPPPPPHIGGSAPPPPHMG-------GSAPPPPHMGQNYGPPPPNNMGGPRHPPPYGAP 327

Query: 242 PRPFNSGAAPPHNFGGPQQNNYGG-PQPNNRWGAPPNNYGRPSTSSGSPPQNSYGEMQPN 280
           P+    G  PP N+GG    NYGG P  NN  GAPP NYG      G PPQ  YG + P 
Sbjct: 328 PQNNMGGPRPPQNYGGTPPPNYGGAPPANNMGGAPPPNYG-----GGPPPQ--YGAVPPP 365

[Close]

BLAST of Tan0006589 vs. TAIR 10
Match: AT1G53260.1 (LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: cobalt ion binding (TAIR:AT3G15000.1); Has 32763 Blast hits to 18534 proteins in 929 species: Archae - 22; Bacteria - 2420; Metazoa - 15140; Fungi - 5401; Plants - 5313; Viruses - 485; Other Eukaryotes - 3982 (source: NCBI BLink). )

HSP 1 Score: 147.5 bits (371), Expect = 1.7e-35
Identity = 124/278 (44.60%), Postives = 141/278 (50.72%), Query Frame = 0


Query: 21  MKIYSVTTRCFFAFGCLVSEELSYKIKGIPLCLLPRVRWVLPDSYLDVKNKDYGELLSAF 80
           MKIYSV+ +C+FAFG LVSE+LS+KIK      LP+V+WVLPDSYLD KNKDY       
Sbjct: 1   MKIYSVSHKCYFAFGALVSEDLSHKIKE-----LPKVKWVLPDSYLDGKNKDY------- 60

Query: 81  LHFCWACGGEPFINEQAVPYDLKYHEEWIRNNARANKRNRANFERRENMQSREFPNASAN 140
                  GGEPFI+ +AVPYD KYHEEWIRNNA A   NR     R +   R   N   N
Sbjct: 61  -------GGEPFIDGKAVPYDPKYHEEWIRNNANATNENRRPRRPRNSDGGR---NDRGN 120

Query: 141 QPAG-----PNMS-GPAPSNMPSNNFSGSMPPHNHAGMPQGNYPGAPPLPPN---NFSKP 200
           Q  G     PN   G AP   P    + +MPPH        NY G PP PPN   N+  P
Sbjct: 121 QDTGYRRPPPNQGMGGAPPPPPHIGNNPNMPPHIQPPNMNQNYRGPPP-PPNMNQNYQGP 180

Query: 201 PPPPPN-NFSGPPPRNYAPPRPFNSGAAPPHNFGGPQQNNYGGPQPNNR----WGAPPNN 260
           P P  N N+ GPPP N       N    PP N       +Y GP P N      G PP+N
Sbjct: 181 PAPNMNQNYQGPPPSNMGQ----NYQGPPPPN----MNQSYQGPPPPNMNQSYQGPPPSN 240

Query: 261 YGRPSTSSGSPP----QNSYGEMQPNA-GGWSSNVHNN 280
            G+       PP    QN  G   PN  GGWS N   N
Sbjct: 241 MGQNYRGPSLPPPNMSQNYEGPPPPNMNGGWSGNYQQN 247

[Close]

BLAST of Tan0006589 vs. TAIR 10
Match: AT1G53260.2 (LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: cobalt ion binding (TAIR:AT3G15000.1); Has 246 Blast hits to 241 proteins in 32 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 16; Plants - 212; Viruses - 1; Other Eukaryotes - 8 (source: NCBI BLink). )

HSP 1 Score: 108.6 bits (270), Expect = 8.6e-24
Identity = 92/219 (42.01%), Postives = 107/219 (48.86%), Query Frame = 0


Query: 21  MKIYSVTTRCFFAFGCLVSEELSYKIKGIPLCLLPRVRWVLPDSYLDVKNKDYGELLSAF 80
           MKIYSV+ +C+FAFG LVSE+LS+KIK      LP+V+WVLPDSYLD KNKDY       
Sbjct: 1   MKIYSVSHKCYFAFGALVSEDLSHKIKE-----LPKVKWVLPDSYLDGKNKDY------- 60

Query: 81  LHFCWACGGEPFINEQAVPYDLKYHEEWIRNNARANKRNRANFERRENMQSREFPNASAN 140
                  GGEPFI+ +AVPYD KYHEEWIRNNA A   NR              P    N
Sbjct: 61  -------GGEPFIDGKAVPYDPKYHEEWIRNNANATNENRR-------------PRRPRN 120

Query: 141 QPAGPNMSGPAPSNMPSNNFSGSMPPHNHAGMPQGNYPGAPPLPP---NNFSKPPP-PPP 200
              G N  G        N  +G   P  + GM      GAPP PP   NN + PP   PP
Sbjct: 121 SDGGRNDRG--------NQDTGYRRPPPNQGM-----GGAPPPPPHIGNNPNMPPHIQPP 174

Query: 201 N---NFSGPPPRNYAPPRPFNSGAAPPHNFGGPQQNNYG 233
           N   N+ G     + P     S A       G     +G
Sbjct: 181 NMNQNYRGTTTAKHEPELSGTSTAKHEPELSGTSTVEHG 174

[Close]

BLAST of Tan0006589 vs. TAIR 10
Match: AT1G72530.2 (plastid developmental protein DAG, putative )

HSP 1 Score: 96.7 bits (239), Expect = 3.4e-20
Identity = 48/136 (35.29%), Postives = 72/136 (52.94%), Query Frame = 0


Query: 5   LLDGCDFEHWLV-----------------------------KEARMKIYSVTTRCFFAFG 64
           L++GCD++HWLV                             +EA+  IYSV+T+ ++AFG
Sbjct: 48  LVEGCDYKHWLVLMKPPNGYPTRNHIVQSFVETLAMALGSEEEAKRSIYSVSTKYYYAFG 107

Query: 65  CLVSEELSYKIKGIPLCLLPRVRWVLPDSYLDVKNKDYGELLSAFLHFCWACGGEPFINE 112
           C + E L+YKI+      LP V+WVLPDS++   +  YG   +          GEPF++ 
Sbjct: 108 CRIHEPLTYKIRS-----LPDVKWVLPDSFIVDGDNRYGVFFA----------GEPFVDG 167

[Close]

BLAST of Tan0006589 vs. TAIR 10
Match: AT1G72530.1 (plastid developmental protein DAG, putative )

HSP 1 Score: 94.7 bits (234), Expect = 1.3e-19
Identity = 48/136 (35.29%), Postives = 71/136 (52.21%), Query Frame = 0


Query: 5   LLDGCDFEHWLV-----------------------------KEARMKIYSVTTRCFFAFG 64
           L++GCD++HWLV                             +EA+  IYSV+T+ ++AFG
Sbjct: 48  LVEGCDYKHWLVLMKPPNGYPTRNHIVQSFVETLAMALGSEEEAKRSIYSVSTKYYYAFG 107

Query: 65  CLVSEELSYKIKGIPLCLLPRVRWVLPDSYLDVKNKDYGELLSAFLHFCWACGGEPFINE 112
           C + E L+YKI+      LP V+WVLPDS++   +  Y              GGEPF++ 
Sbjct: 108 CRIHEPLTYKIRS-----LPDVKWVLPDSFIVDGDNRY--------------GGEPFVDG 164

The following BLAST results are available for this feature:

BLAST of Tan0006589 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LKA5	5.0e-53	47.27	Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial OS=Arabido...	[more]
Q9CAH0	1.8e-18	35.29	Multiple organellar RNA editing factor 7, mitochondrial OS=Arabidopsis thaliana ...	[more]
Q84JZ6	4.5e-17	36.78	Multiple organellar RNA editing factor 3, mitochondrial OS=Arabidopsis thaliana ...	[more]
Q9LPZ1	3.5e-14	31.58	Multiple organellar RNA editing factor 9, chloroplastic OS=Arabidopsis thaliana ...	[more]
Q38732	2.3e-13	29.24	DAG protein, chloroplastic OS=Antirrhinum majus OX=4151 GN=DAG PE=2 SV=1	[more]

BLAST of Tan0006589 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022984464.1	2.5e-94	62.21	multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X2...	[more]
XP_038889853.1	6.3e-93	60.06	multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like [Beni...	[more]
KAG7015044.1	1.8e-92	61.29	Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial [Cucurbita...	[more]
KAG6577022.1	2.0e-91	61.29	Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial, partial [...	[more]
XP_022984463.1	2.6e-91	57.49	multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X1...	[more]

BLAST of Tan0006589 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JAK6	1.2e-94	62.21	multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X2...	[more]
A0A6J1JAJ8	1.3e-91	57.49	multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X1...	[more]
A0A6J1E5B5	1.3e-91	61.19	multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X2...	[more]
A0A6J1CPB1	4.8e-91	58.15	multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like OS=Mo...	[more]
A0A6J1EA12	1.8e-90	60.23	multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X1...	[more]

BLAST of Tan0006589 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15000.1	3.6e-54	47.27	cobalt ion binding	[more]
AT1G53260.1	1.7e-35	44.60	LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: cob...	[more]
AT1G53260.2	8.6e-24	42.01	LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: cob...	[more]
AT1G72530.2	3.4e-20	35.29	plastid developmental protein DAG, putative	[more]
AT1G72530.1	1.3e-19	35.29	plastid developmental protein DAG, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 221..274
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..274
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..216
None	No IPR available	PANTHER	PTHR31346:SF4	MULTIPLE ORGANELLAR RNA EDITING FACTOR 8, CHLOROPLASTIC/MITOCHONDRIAL	coord: 2..16
None	No IPR available	PANTHER	PTHR31346:SF4	MULTIPLE ORGANELLAR RNA EDITING FACTOR 8, CHLOROPLASTIC/MITOCHONDRIAL	coord: 17..235
IPR039206	MORF/ORRM1/DAG-like	PANTHER	PTHR31346	MULTIPLE ORGANELLAR RNA EDITING FACTOR 2, CHLOROPLASTIC-RELATED-RELATED	coord: 17..235
IPR039206	MORF/ORRM1/DAG-like	PANTHER	PTHR31346	MULTIPLE ORGANELLAR RNA EDITING FACTOR 2, CHLOROPLASTIC-RELATED-RELATED	coord: 2..16

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0006589.1	Tan0006589.1	mRNA
Tan0006589.2	Tan0006589.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016554	cytidine to uridine editing