Tan0006490 (gene) Snake gourd v1

Overview
NameTan0006490
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
LocationLG10: 15443354 .. 15443579 (-)
RNA-Seq ExpressionTan0006490
SyntenyTan0006490
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATATACCAACACAGCAACATGGTTGCACAGCGGCGGAGGAGGTAAATTCTGCCTCTTTGCTCCTTTATCAAAGCAGCACACTTGGAAGTAAGCCTATGGCTATGGCTATGGCTATGGCTCTTCATTTTCTCAGCCATGGCTAAACAAAAACCCTTAGCTTTTTGCTGGGGATGAAACCCAGATCAAATGCTTTTGAGGGTTGAAAATGGTGGTGGGGTTTGA

mRNA sequence

ATGAATATACCAACACAGCAACATGGTTGCACAGCGGCGGAGGAGGTAAATTCTGCCTCTTTGCTCCTTTATCAAAGCAGCACACTTGGAAGTAAGCCTATGGCTATGGCTATGGCTATGGCTCTTCATTTTCTCAGCCATGATCAAATGCTTTTGAGGGTTGAAAATGGTGGTGGGGTTTGA

Coding sequence (CDS)

ATGAATATACCAACACAGCAACATGGTTGCACAGCGGCGGAGGAGGTAAATTCTGCCTCTTTGCTCCTTTATCAAAGCAGCACACTTGGAAGTAAGCCTATGGCTATGGCTATGGCTATGGCTCTTCATTTTCTCAGCCATGATCAAATGCTTTTGAGGGTTGAAAATGGTGGTGGGGTTTGA

Protein sequence

MNIPTQQHGCTAAEEVNSASLLLYQSSTLGSKPMAMAMAMALHFLSHDQMLLRVENGGGV
Homology
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BLAST of Tan0006490 vs. ExPASy TrEMBL
Match: A0A0A0KYY7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G012520 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.3e-08
Identity = 41/61 (67.21%), Postives = 44/61 (72.13%), Query Frame = 0 

Query: 1  MNIPTQQHGCTAAEEVNSASLLLYQSSTLGSKPMAMAMAMALHFLSH-DQMLLRVENGGG 60
          MNI T+Q GCTAAEEVNSASLLLYQSSTL +K M MAMA+   FLSH     L   NGG 
Sbjct: 1  MNIGTKQDGCTAAEEVNSASLLLYQSSTLRTKLMPMAMALHHLFLSHGSNYKLGDGNGGA 60

The following BLAST results are available for this feature:
BLAST of Tan0006490 vs.
Match NameE-valueIdentityDescription
BLAST of Tan0006490 vs.
Match NameE-valueIdentityDescription
BLAST of Tan0006490 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KYY72.3e-0867.21Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G012520 PE=4 SV=1[more]
BLAST of Tan0006490 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0006490.1Tan0006490.1mRNA