Tan0006419 (gene) Snake gourd v1

Overview
NameTan0006419
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionReverse transcriptase domain-containing protein
LocationLG08: 485380 .. 486483 (+)
RNA-Seq ExpressionTan0006419
SyntenyTan0006419
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTTCGTGTCCTCTGCGAGATAGGCGTATTGCGGATCTCATCCAGGTAGAGAGAGGATGGAAGGAGAGTGTGATTCGTGACTCTTTCCTTCCTCATGATGTCGAGGATATCCTAAATATTCCTTTAGGAGGGACTCAGGTGATCGAGGAGATTATATGGGACATGGATAGGAAAGGAAAGTTCTCGGTTAAGAGTGCCTATAGATTAGGTTACCGGCTTTCCCGATCCCTTAGTTGTTCTCCTTCTGACTCGAGTGAGGTGAAAGCCCTATGGGAGGATTTGTGGAAGATTGACGTTATGCCTAGGATTAAGATCGGGGTGTGGAGGCTTCTCAATGACATTGTCCCCTGTGTGCAGGGCTCATTGGTTGCCTTTGGAGTATTGGGACTGTATTAGAAAGTCTGCAGTGCGCAAGGATTTGAGGGGGATGTGCAGCATCTGGCTGAGGCAGAATCAAATTAAGTTTGGAGACGAGTGTGCGAACATGGATTCCCTAATTTTTTTTGTTTCTAGAATGATGGAACTTTATCTGGATAAGGATAGCCTCATGTCTGATAGGAGTTCTCAAACGATTGAACTGAGCCCGAAGGGTTGGAAGCTGAACGTAGATGCGACTTGGTTTGATAAGGCCCTTAAAGGGGGCTTTGGATGGATTGTTCGTGATTGGCTTAAGGAGCCTGTTTTGGGTGGGATGACCTTTGTGGAGCGTTGTTGGCCTATTAAGGTCCTTGAAGCAAAAGCCATGATCGAAGGTTTGTCCCAACTTTTGTCGTTGTGGAAGGAGCCTATACCCCCTCTCATCGTGGAATCTGACTCCGTGGAGGTTATTGGTTTGCTTAATAGCATGTGTGTTGATCTCTCTCTGAGGTTAGTTTATTCATTGTTGAAGCTCTACTTGGGCTTGCTTCGACTCTCAGATCTTGTATTTTTTGTAAAGTTTTTAGAGAGAATAACAAAACCGTTCATAATCTTACAGTTTTGACATCCTCTTCGAGCAATTCTTTGATCGGAAAAGAGTGTTTTGGGACGGATGTTTATCCTCCCCTTGTTGATAGGAGCCGATTGGGTGTGGTTTTCCTGGGTTCTTGCTGTTTCGTTTAA

mRNA sequence

ATGATTTCGTGTCCTCTGCGAGATAGGCGTATTGCGGATCTCATCCAGGTAGAGAGAGGATGGAAGGAGAGTGTGATTCGTGACTCTTTCCTTCCTCATGATGTCGAGGATATCCTAAATATTCCTTTAGGAGGGACTCAGGTGATCGAGGAGATTATATGGGACATGGATAGGAAAGGAAAGTTCTCGGTTAAGAGTGCCTATAGATTAGGTTACCGGCTTTCCCGATCCCTTAGTTGTTCTCCTTCTGACTCGAGTGAGGTGAAAGCCCTATGGGAGGATTTGTGGAAGATTGACGTTATGCCTAGGATTAAGATCGGGGTGTGGAGGCTTCTCAATGACATTGTCCCCTGTGTGCAGGGCTCATTGGTTGCCTTTGGAGTATTGGGACTAATGATGGAACTTTATCTGGATAAGGATAGCCTCATGTCTGATAGGAGTTCTCAAACGATTGAACTGAGCCCGAAGGGTTGGAAGCTGAACGTAGATGCGACTTGGTTTGATAAGGCCCTTAAAGGGGGCTTTGGATGGATTGTTCGTGATTGGCTTAAGGAGCCTGTTTTGGGTGGGATGACCTTTGTGGAGCGTTGTTGGCCTATTAAGGTCCTTGAAGCAAAAGCCATGATCGAAGGTTTGTCCCAACTTTTGTCGTTGTGGAAGGAGCCTATACCCCCTCTCATCGTGGAATCTGACTCCGTGGAGGTTATTGGTTTGCTTAATAGCATGTGTGTTGATCTCTCTCTGAGAGAGAATAACAAAACCGTTCATAATCTTACAGTTTTGACATCCTCTTCGAGCAATTCTTTGATCGGAAAAGAGTGTTTTGGGACGGATGTTTATCCTCCCCTTGTTGATAGGAGCCGATTGGGTGTGGTTTTCCTGGGTTCTTGCTGTTTCGTTTAA

Coding sequence (CDS)

ATGATTTCGTGTCCTCTGCGAGATAGGCGTATTGCGGATCTCATCCAGGTAGAGAGAGGATGGAAGGAGAGTGTGATTCGTGACTCTTTCCTTCCTCATGATGTCGAGGATATCCTAAATATTCCTTTAGGAGGGACTCAGGTGATCGAGGAGATTATATGGGACATGGATAGGAAAGGAAAGTTCTCGGTTAAGAGTGCCTATAGATTAGGTTACCGGCTTTCCCGATCCCTTAGTTGTTCTCCTTCTGACTCGAGTGAGGTGAAAGCCCTATGGGAGGATTTGTGGAAGATTGACGTTATGCCTAGGATTAAGATCGGGGTGTGGAGGCTTCTCAATGACATTGTCCCCTGTGTGCAGGGCTCATTGGTTGCCTTTGGAGTATTGGGACTAATGATGGAACTTTATCTGGATAAGGATAGCCTCATGTCTGATAGGAGTTCTCAAACGATTGAACTGAGCCCGAAGGGTTGGAAGCTGAACGTAGATGCGACTTGGTTTGATAAGGCCCTTAAAGGGGGCTTTGGATGGATTGTTCGTGATTGGCTTAAGGAGCCTGTTTTGGGTGGGATGACCTTTGTGGAGCGTTGTTGGCCTATTAAGGTCCTTGAAGCAAAAGCCATGATCGAAGGTTTGTCCCAACTTTTGTCGTTGTGGAAGGAGCCTATACCCCCTCTCATCGTGGAATCTGACTCCGTGGAGGTTATTGGTTTGCTTAATAGCATGTGTGTTGATCTCTCTCTGAGAGAGAATAACAAAACCGTTCATAATCTTACAGTTTTGACATCCTCTTCGAGCAATTCTTTGATCGGAAAAGAGTGTTTTGGGACGGATGTTTATCCTCCCCTTGTTGATAGGAGCCGATTGGGTGTGGTTTTCCTGGGTTCTTGCTGTTTCGTTTAA

Protein sequence

MISCPLRDRRIADLIQVERGWKESVIRDSFLPHDVEDILNIPLGGTQVIEEIIWDMDRKGKFSVKSAYRLGYRLSRSLSCSPSDSSEVKALWEDLWKIDVMPRIKIGVWRLLNDIVPCVQGSLVAFGVLGLMMELYLDKDSLMSDRSSQTIELSPKGWKLNVDATWFDKALKGGFGWIVRDWLKEPVLGGMTFVERCWPIKVLEAKAMIEGLSQLLSLWKEPIPPLIVESDSVEVIGLLNSMCVDLSLRENNKTVHNLTVLTSSSSNSLIGKECFGTDVYPPLVDRSRLGVVFLGSCCFV
Homology
BLAST of Tan0006419 vs. NCBI nr
Match: EEC73134.1 (hypothetical protein OsI_07152 [Oryza sativa Indica Group])

HSP 1 Score: 116.7 bits (291), Expect = 3.5e-22
Identity = 73/234 (31.20%), Postives = 123/234 (52.56%), Query Frame = 0

Query: 11  IADLIQVERGWKESVIRDSFLPHDVEDILNIPLGGTQVIEEIIWDMDRKGKFSVKSAYRL 70
           ++D+++ +  W E+++   FLP DVE+IL I +   Q  + + W  DR G+FSV+SAY+L
Sbjct: 338 VSDILKPDGSWDENLVSAIFLPVDVEEILKIKISSRQEEDFVAWFPDRLGRFSVRSAYQL 397

Query: 71  GYRLSRSLSCSPSDSSEVKALWEDLWKIDVMPRIKIGVWRLLNDIVPCVQGSLVA-FGVL 130
             +++R   CS S    +K  W  +W  +V  ++KI  WR   + +P ++      FG++
Sbjct: 398 AMQIARLDECSCSSDYAIKKGWNLIWSCNVPQKVKIFGWRAATNSLPTMENKKKRNFGIV 457

Query: 131 GLMMELYLDKDSLMSDRSSQTIELSPK-GW-KLNVDATWFDKALKGGFGWIVRDWLKEPV 190
           G  +         M+ +    +   PK GW KLN+D ++  +  +GG G ++R+     +
Sbjct: 458 GRNVRQVWLATLFMAYK----LWSRPKPGWMKLNIDGSYGPQDGRGGIGAVLRESFGRVI 517

Query: 191 LGGMTFVERCWPIKVLEAKAMIEGLSQLLSLWKEPIPPLIVESDSVEVIGLLNS 242
                F+ RC      E  A  +GL+  L  W   + P+ VESD +E+I LLNS
Sbjct: 518 FSACGFIGRCNGALESELIACRDGLNLALQ-W--TLLPIAVESDCLEIIQLLNS 564

BLAST of Tan0006419 vs. NCBI nr
Match: EEC68026.1 (hypothetical protein OsI_35837 [Oryza sativa Indica Group])

HSP 1 Score: 104.4 bits (259), Expect = 1.8e-18
Identity = 70/236 (29.66%), Postives = 109/236 (46.19%), Query Frame = 0

Query: 11  IADLIQVERGWKESVIRDSFLPHDVEDILNIPLGGTQVIEEIIWDMDRKGKFSVKSAYRL 70
           ++DLI+ +  W    I   FLP D + ILNI L   Q  + + W  DR G FSV+SAY L
Sbjct: 528 VSDLIKPDGTWDSDRINQIFLPLDADLILNIRLSARQEEDFLSWHPDRLGVFSVRSAYHL 587

Query: 71  GYRLSRSLSCSPSDSSEVKALWEDLWKIDVMPRIKIGVWRLLNDIVPCVQG----SLVAF 130
              L+   S S S    ++  W+ LWK  V  ++KI  W+  ++ +P ++     +L A 
Sbjct: 588 ALSLNEMASSSSSSDENLRKTWDCLWKSKVPQKVKIHAWKAASNSLPTMENKKKRNLEAS 647

Query: 131 GVLGLMMELYLDKDSLMSDRSSQTIELSPKGW-KLNVDATWFDKALKGGFGWIVRDWLKE 190
            +  +   +   K  L              GW KLN+D ++     +GG G I+R+    
Sbjct: 648 EICKIQPPVPWTKPQL--------------GWMKLNIDGSFDASLNQGGIGAILRNNAGS 707

Query: 191 PVLGGMTFVERCWPIKVLEAKAMIEGLSQLLSLWKEPIPPLIVESDSVEVIGLLNS 242
            +     F+ERC      E  A  EG+   L  W   + P+ +E+D +E + L  S
Sbjct: 708 VIFSACGFIERCRSALEAELLACKEGIIMALQ-W--TLLPICIETDCLEAVNLNQS 746

BLAST of Tan0006419 vs. NCBI nr
Match: XP_024200343.1 (uncharacterized protein LOC112203645 [Rosa chinensis])

HSP 1 Score: 99.0 bits (245), Expect = 7.5e-17
Identity = 76/279 (27.24%), Postives = 120/279 (43.01%), Query Frame = 0

Query: 21  WKESVIRDSFLPHDVEDILNIPLGGTQVIEEIIWDMDRKGKFSVKSAYRLGYRLSR---- 80
           W ES+IR +F PH+V+ IL+IP+   +  + I+W   + G+++VKS   L   L R    
Sbjct: 2   WNESLIRSTFRPHEVDTILSIPIAAGRRDDSIVWHYCKDGRYTVKSGCWLASELQRVHEG 61

Query: 81  SLSCSPSDSSEVKALWEDLWKIDVMPRIKIGVWRLLNDIVPCV----------------- 140
           S+ CS S + E   +W+ LWK+ +  ++K+ +WR     +PC                  
Sbjct: 62  SVGCSNSSNKEGTQVWDTLWKLRIANKVKLFLWRACKGFLPCAANLFRRYREILTFVADV 121

Query: 141 -----QGSLVAFGVLGLMMELYLDK--------------------DSLMSDRSSQTIEL- 200
                Q S+V   V GL    +  +                     ++  D + + +++ 
Sbjct: 122 GGRRRQQSIVCGAVRGLRRNRFKHEGVVEESKHIVWSANEWLNNFQTVTKDATQKRVKVK 181

Query: 201 ----SPKGWKLNVDATWFDKALKGGFGWIVRDWLKEPVLGGMTFVERCWPIKVLEAKAMI 249
               +    KLN DA    K  K G G +VRD   +    G   +     I  +EA A+ 
Sbjct: 182 WRPPTAPNLKLNTDAAIDYKKKKAGLGMVVRDGEGKLKCAGHKVLPGNPSIVAIEALAVY 241

BLAST of Tan0006419 vs. NCBI nr
Match: AAS55787.1 (hypothetical protein [Oryza sativa Japonica Group] >AAV32224.1 hypothetical protein [Oryza sativa Japonica Group])

HSP 1 Score: 95.1 bits (235), Expect = 1.1e-15
Identity = 76/279 (27.24%), Postives = 123/279 (44.09%), Query Frame = 0

Query: 11   IADLIQVERGWKESVIRDSFLPHDVEDILNIPLGGTQVIEEIIWDMDRKGKFSVKSAYRL 70
            ++DLI  +  W  + I   FL  D + I  I +      + I W  D+ G+FSV+SAY+L
Sbjct: 1600 VSDLIAEDGTWDSAKINQYFLKIDADIIQKICISARLEEDFIAWHPDKTGRFSVRSAYKL 1659

Query: 71   GYRLSRSLSCSPSDSSEVKALWEDLWKIDVMPRIKIGVWRLLNDIVPCVQG----SLVAF 130
              +L+   +CS S SS +   WE +WK +V  +++I  WR+ ++ +  ++     +L  F
Sbjct: 1660 ALQLADMNNCSSSSSSRLNKSWELIWKCNVPQKVRIFAWRVASNSLATMENKKKRNLERF 1719

Query: 131  GVLGL-------------------MMELYLDKDSLM--------------SDRSSQTIEL 190
             V G+                    + + L+K   +                  ++  E 
Sbjct: 1720 DVCGICDREKEDAGHALCRCVHANSLWVNLEKGKYVVSVNFPKTTAIKHTPGAENRRWER 1779

Query: 191  SPKGW-KLNVDATWFDKALKGGFGWIVRDWLKEPVLGGMTFVERCWPIKVLEAKAMIEGL 250
               GW KLNVD ++   + KGG G I+R+ L   +      ++ C      E  A +EGL
Sbjct: 1780 PRNGWMKLNVDGSFDINSEKGGIGMILRNCLGNVIFSSCRSLDSCSGPLEAELHACVEGL 1839

Query: 251  SQLLSLWKEPIPPLIVESDSVEVIGLLNSMCVDLSLREN 252
               L  W   + P+ VE+D   VI LLN    D S+  N
Sbjct: 1840 HLALH-W--TLLPIQVETDCSSVIQLLNHPDKDRSVLAN 1875

BLAST of Tan0006419 vs. NCBI nr
Match: XP_022149515.1 (uncharacterized protein LOC111017927 [Momordica charantia])

HSP 1 Score: 94.4 bits (233), Expect = 1.8e-15
Identity = 44/99 (44.44%), Postives = 61/99 (61.62%), Query Frame = 0

Query: 21  WKESVIRDSFLPHDVEDILNIPLGGTQVIEEIIWDMDRKGKFSVKSAYRLGYRLSRSLSC 80
           W ES+IR+SFL  + + ILNIPL      +E+IW  D+K KFSVKS YRLG  L+ +   
Sbjct: 26  WNESLIRNSFLEEEADIILNIPLSTCNQHDEVIWGPDKKDKFSVKSTYRLGVHLASADEV 85

Query: 81  SPSDSSEVKALWEDLWKIDVMPRIKIGVWRLLNDIVPCV 120
             S+S E    W+ LW+  V  ++KI  WR+ NDI+  +
Sbjct: 86  QTSNSEEEAKKWKKLWRTLVPTKVKICCWRIYNDIISTI 124

BLAST of Tan0006419 vs. ExPASy TrEMBL
Match: B8AHI8 (Uncharacterized protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_07152 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.7e-22
Identity = 73/234 (31.20%), Postives = 123/234 (52.56%), Query Frame = 0

Query: 11  IADLIQVERGWKESVIRDSFLPHDVEDILNIPLGGTQVIEEIIWDMDRKGKFSVKSAYRL 70
           ++D+++ +  W E+++   FLP DVE+IL I +   Q  + + W  DR G+FSV+SAY+L
Sbjct: 338 VSDILKPDGSWDENLVSAIFLPVDVEEILKIKISSRQEEDFVAWFPDRLGRFSVRSAYQL 397

Query: 71  GYRLSRSLSCSPSDSSEVKALWEDLWKIDVMPRIKIGVWRLLNDIVPCVQGSLVA-FGVL 130
             +++R   CS S    +K  W  +W  +V  ++KI  WR   + +P ++      FG++
Sbjct: 398 AMQIARLDECSCSSDYAIKKGWNLIWSCNVPQKVKIFGWRAATNSLPTMENKKKRNFGIV 457

Query: 131 GLMMELYLDKDSLMSDRSSQTIELSPK-GW-KLNVDATWFDKALKGGFGWIVRDWLKEPV 190
           G  +         M+ +    +   PK GW KLN+D ++  +  +GG G ++R+     +
Sbjct: 458 GRNVRQVWLATLFMAYK----LWSRPKPGWMKLNIDGSYGPQDGRGGIGAVLRESFGRVI 517

Query: 191 LGGMTFVERCWPIKVLEAKAMIEGLSQLLSLWKEPIPPLIVESDSVEVIGLLNS 242
                F+ RC      E  A  +GL+  L  W   + P+ VESD +E+I LLNS
Sbjct: 518 FSACGFIGRCNGALESELIACRDGLNLALQ-W--TLLPIAVESDCLEIIQLLNS 564

BLAST of Tan0006419 vs. ExPASy TrEMBL
Match: B8BK40 (Uncharacterized protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_35837 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 8.6e-19
Identity = 70/236 (29.66%), Postives = 109/236 (46.19%), Query Frame = 0

Query: 11  IADLIQVERGWKESVIRDSFLPHDVEDILNIPLGGTQVIEEIIWDMDRKGKFSVKSAYRL 70
           ++DLI+ +  W    I   FLP D + ILNI L   Q  + + W  DR G FSV+SAY L
Sbjct: 528 VSDLIKPDGTWDSDRINQIFLPLDADLILNIRLSARQEEDFLSWHPDRLGVFSVRSAYHL 587

Query: 71  GYRLSRSLSCSPSDSSEVKALWEDLWKIDVMPRIKIGVWRLLNDIVPCVQG----SLVAF 130
              L+   S S S    ++  W+ LWK  V  ++KI  W+  ++ +P ++     +L A 
Sbjct: 588 ALSLNEMASSSSSSDENLRKTWDCLWKSKVPQKVKIHAWKAASNSLPTMENKKKRNLEAS 647

Query: 131 GVLGLMMELYLDKDSLMSDRSSQTIELSPKGW-KLNVDATWFDKALKGGFGWIVRDWLKE 190
            +  +   +   K  L              GW KLN+D ++     +GG G I+R+    
Sbjct: 648 EICKIQPPVPWTKPQL--------------GWMKLNIDGSFDASLNQGGIGAILRNNAGS 707

Query: 191 PVLGGMTFVERCWPIKVLEAKAMIEGLSQLLSLWKEPIPPLIVESDSVEVIGLLNS 242
            +     F+ERC      E  A  EG+   L  W   + P+ +E+D +E + L  S
Sbjct: 708 VIFSACGFIERCRSALEAELLACKEGIIMALQ-W--TLLPICIETDCLEAVNLNQS 746

BLAST of Tan0006419 vs. ExPASy TrEMBL
Match: Q75M12 (Reverse transcriptase domain-containing protein OS=Oryza sativa subsp. japonica OX=39947 GN=P0431G05.11 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 5.2e-16
Identity = 76/279 (27.24%), Postives = 123/279 (44.09%), Query Frame = 0

Query: 11   IADLIQVERGWKESVIRDSFLPHDVEDILNIPLGGTQVIEEIIWDMDRKGKFSVKSAYRL 70
            ++DLI  +  W  + I   FL  D + I  I +      + I W  D+ G+FSV+SAY+L
Sbjct: 1600 VSDLIAEDGTWDSAKINQYFLKIDADIIQKICISARLEEDFIAWHPDKTGRFSVRSAYKL 1659

Query: 71   GYRLSRSLSCSPSDSSEVKALWEDLWKIDVMPRIKIGVWRLLNDIVPCVQG----SLVAF 130
              +L+   +CS S SS +   WE +WK +V  +++I  WR+ ++ +  ++     +L  F
Sbjct: 1660 ALQLADMNNCSSSSSSRLNKSWELIWKCNVPQKVRIFAWRVASNSLATMENKKKRNLERF 1719

Query: 131  GVLGL-------------------MMELYLDKDSLM--------------SDRSSQTIEL 190
             V G+                    + + L+K   +                  ++  E 
Sbjct: 1720 DVCGICDREKEDAGHALCRCVHANSLWVNLEKGKYVVSVNFPKTTAIKHTPGAENRRWER 1779

Query: 191  SPKGW-KLNVDATWFDKALKGGFGWIVRDWLKEPVLGGMTFVERCWPIKVLEAKAMIEGL 250
               GW KLNVD ++   + KGG G I+R+ L   +      ++ C      E  A +EGL
Sbjct: 1780 PRNGWMKLNVDGSFDINSEKGGIGMILRNCLGNVIFSSCRSLDSCSGPLEAELHACVEGL 1839

Query: 251  SQLLSLWKEPIPPLIVESDSVEVIGLLNSMCVDLSLREN 252
               L  W   + P+ VE+D   VI LLN    D S+  N
Sbjct: 1840 HLALH-W--TLLPIQVETDCSSVIQLLNHPDKDRSVLAN 1875

BLAST of Tan0006419 vs. ExPASy TrEMBL
Match: A0A6J1D5Y4 (uncharacterized protein LOC111017927 OS=Momordica charantia OX=3673 GN=LOC111017927 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 8.9e-16
Identity = 44/99 (44.44%), Postives = 61/99 (61.62%), Query Frame = 0

Query: 21  WKESVIRDSFLPHDVEDILNIPLGGTQVIEEIIWDMDRKGKFSVKSAYRLGYRLSRSLSC 80
           W ES+IR+SFL  + + ILNIPL      +E+IW  D+K KFSVKS YRLG  L+ +   
Sbjct: 26  WNESLIRNSFLEEEADIILNIPLSTCNQHDEVIWGPDKKDKFSVKSTYRLGVHLASADEV 85

Query: 81  SPSDSSEVKALWEDLWKIDVMPRIKIGVWRLLNDIVPCV 120
             S+S E    W+ LW+  V  ++KI  WR+ NDI+  +
Sbjct: 86  QTSNSEEEAKKWKKLWRTLVPTKVKICCWRIYNDIISTI 124

BLAST of Tan0006419 vs. ExPASy TrEMBL
Match: S8D7I6 (Uncharacterized protein (Fragment) OS=Genlisea aurea OX=192259 GN=M569_16150 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 3.2e-13
Identity = 48/116 (41.38%), Postives = 71/116 (61.21%), Query Frame = 0

Query: 8   DRRIADLIQVERG-WKESVIRDSFLPHDVEDILNIPLGGTQVIEEIIWDMDRKGKFSVKS 67
           D R++DLI   RG W +S +R+ F P D E IL+IPL  T+  +++IW+    G +SVKS
Sbjct: 4   DMRVSDLIIPRRGCWNKSKVREVFAPIDAEAILSIPLAKTESEDKLIWNYSLDGIYSVKS 63

Query: 68  AYRLGYRLSRSLSC-SPSDSSEVKA----LWEDLWKIDVMPRIKIGVWRLLNDIVP 118
               GY L +SL+  +PS +S   A    LW+ LWK+ + P+I +  WRL  +I+P
Sbjct: 64  ----GYHLQKSLTLQAPSSASSSHAMTHDLWKSLWKLPLPPKIVLFGWRLAKNILP 115

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
EEC73134.13.5e-2231.20hypothetical protein OsI_07152 [Oryza sativa Indica Group][more]
EEC68026.11.8e-1829.66hypothetical protein OsI_35837 [Oryza sativa Indica Group][more]
XP_024200343.17.5e-1727.24uncharacterized protein LOC112203645 [Rosa chinensis][more]
AAS55787.11.1e-1527.24hypothetical protein [Oryza sativa Japonica Group] >AAV32224.1 hypothetical prot... [more]
XP_022149515.11.8e-1544.44uncharacterized protein LOC111017927 [Momordica charantia][more]
Match NameE-valueIdentityDescription
B8AHI81.7e-2231.20Uncharacterized protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_07152 PE=4... [more]
B8BK408.6e-1929.66Uncharacterized protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_35837 PE=4... [more]
Q75M125.2e-1627.24Reverse transcriptase domain-containing protein OS=Oryza sativa subsp. japonica ... [more]
A0A6J1D5Y48.9e-1644.44uncharacterized protein LOC111017927 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
S8D7I63.2e-1341.38Uncharacterized protein (Fragment) OS=Genlisea aurea OX=192259 GN=M569_16150 PE=... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 161..241
e-value: 6.7E-8
score: 32.4
IPR044730Ribonuclease H-like domain, plant typeCDDcd06222RNase_H_likecoord: 160..241
e-value: 1.44598E-9
score: 53.0868

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0006419.1Tan0006419.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity