Tan0006399 (gene) Snake gourd v1

Overview
NameTan0006399
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
LocationLG10: 12304817 .. 12306378 (-)
RNA-Seq ExpressionTan0006399
SyntenyTan0006399
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTGAGTTTGGAGAATGGCTCCGAGCGTCAGTAATCAAGAGAAAACCTAATGGCATACCAGAGATGGAGTCTGACTTACAACCAGAAAAGCCAATCGGAAAAGAAGAAAGCACCAAATATGGGGCAGGGACAGTAAAAAGTCGTAGTTATGTGGCATGGTGGCGTTCTTCAGGTATACCTTAACAATTGAATGAGTCTTTAAATGATTCATCTCCCCAACAATCGCCAACTAGACAGCCTTTTAAAAACTCGGTGGGAAGCCCAAAATGTGGTGAACTAGTTGGAATTGTTCAGTCCCACCCTGACTCACCTGATTGGAATAACTTGAATAGAAATTCTGAGGATGCTCAGGATTTTGGAGGAAATATTTTTAAAGTTGATTTAAGAAATAGAATGGAAATTGATTTAGCTGGAGAGATTATGGAAGCCCCTTTGAGTTCATCCGGTAAGTTACATGCACCTAATCTAAATAAAAAGGGGAGGTTAGATCATAATATTCCTTCTCTAGATGATCCATTAGTCTTTTCGGCAGTAAGTGGATGCATTAGCCCCTCTAGAATTAAGGGGAAGAGAAAGTATGGCTCTAGGTCGAAACAAGAGACCAAAAGCAAACTTATACCGGCTGGTACTACCTTGGAAGATGGGGAGAATTGTAAGGGGAAGCGTAAGATGGAGGTCCTATGTACTGATCTTATTTCTTATAAAACAAAACTTTGTGCTAATGAGAACGAATCTGTATTGACAGTGGTCGTGAAGCAACCTCGCCAATCATTATGAAAATTCTATGTTTGAATGTTCAAAGTAGGGAAAATCCGAGAACATTCAGAGATCTAAAAGACTTAGTATGTCATCAAAATCCCCAAATAGTTTTTTTGATAGAAACAAAATGTAATCAAAAACTCATATGGAAACTCTAAAGAGTAGCCTCAAATTTTATGGTTGTTTTGTTGTTGAAAGTAAAGGCAATAGTGAGGGGATGTCTCTTCTATGGAAAGATGATTGTGATATAATCCTCAGGTCTTTTTCTAACCACCATATAGATTGTCGAATTTAGTGGAAAGATTACTCATGGAGATTCTCCGGAATCTATGGAGCGCTTGAAGGTGGGAAGAAAAAGATTACGTGTGATCTTATTAACCGGTTAGCAAATGGAAATGAATCACCTTGGTTGGTGGGAGGCGATCTAAATGAATGTCTTTGGACAAAGAAAAAGAAAGCAGGGTCTTCGAAGGTTTCCTCAAATATGAAATTGTTTAGATCGACGTTAAAGGGAGCTCATCTAAAAGACTTGGGGTTTGAAGGTAGTATACATACATGGACAAACAAAAGGCACAGAGGTGATCATATCTTTAAAAGGTTAGATCGATTTCTAGCTAATAATTCCTTTTGCAACTTATTTGGCCGCTCTAAAGTATCTCATCTTAACTGGTACAGTTCGAATCATAGACTTATATGTGTTGAATTGTTTAATACCTCCCTTTTAGGAATCTCCCGTGTTAGCAAAAAGTGTTTTCGCTTTGAAGAGTTATGGACCAAGGATGCGGAATATGGAGAGATGA

mRNA sequence

ATGCCTGAGTTTGGAGAATGGCTCCGAGCGTCAGTAATCAAGAGAAAACCTAATGGCATACCAGAGATGGAGTCTGACTTACAACCAGAAAAGCCAATCGGAAAAGAAGAAAGCACCAAATATGGGGCAGGGACAGTAAAAAGTCGTAGTTATGTGGCATGGTGGCGTTCTTCAGTTGGAATTGTTCAGTCCCACCCTGACTCACCTGATTGGAATAACTTGAATAGAAATTCTGAGGATGCTCAGGATTTTGGAGGAAATATTTTTAAAGTTGATTTAAGAAATAGAATGGAAATTGATTTAGCTGGAGAGATTATGGAAGCCCCTTTGAGTTCATCCGTAAGTGGATGCATTAGCCCCTCTAGAATTAAGGGGAAGAGAAAGTATGGCTCTAGGTCGAAACAAGAGACCAAAAGCAAACTTATACCGGCTGGTACTACCTTGGAAGATGGGGAGAATTGTAAGGGGAAGCGTAAGATGGAGATTGTCGAATTTAGTGGAAAGATTACTCATGGAGATTCTCCGGAATCTATGGAGCGCTTGAAGGAATCTCCCGTGTTAGCAAAAAGTGTTTTCGCTTTGAAGAGTTATGGACCAAGGATGCGGAATATGGAGAGATGA

Coding sequence (CDS)

ATGCCTGAGTTTGGAGAATGGCTCCGAGCGTCAGTAATCAAGAGAAAACCTAATGGCATACCAGAGATGGAGTCTGACTTACAACCAGAAAAGCCAATCGGAAAAGAAGAAAGCACCAAATATGGGGCAGGGACAGTAAAAAGTCGTAGTTATGTGGCATGGTGGCGTTCTTCAGTTGGAATTGTTCAGTCCCACCCTGACTCACCTGATTGGAATAACTTGAATAGAAATTCTGAGGATGCTCAGGATTTTGGAGGAAATATTTTTAAAGTTGATTTAAGAAATAGAATGGAAATTGATTTAGCTGGAGAGATTATGGAAGCCCCTTTGAGTTCATCCGTAAGTGGATGCATTAGCCCCTCTAGAATTAAGGGGAAGAGAAAGTATGGCTCTAGGTCGAAACAAGAGACCAAAAGCAAACTTATACCGGCTGGTACTACCTTGGAAGATGGGGAGAATTGTAAGGGGAAGCGTAAGATGGAGATTGTCGAATTTAGTGGAAAGATTACTCATGGAGATTCTCCGGAATCTATGGAGCGCTTGAAGGAATCTCCCGTGTTAGCAAAAAGTGTTTTCGCTTTGAAGAGTTATGGACCAAGGATGCGGAATATGGAGAGATGA

Protein sequence

MPEFGEWLRASVIKRKPNGIPEMESDLQPEKPIGKEESTKYGAGTVKSRSYVAWWRSSVGIVQSHPDSPDWNNLNRNSEDAQDFGGNIFKVDLRNRMEIDLAGEIMEAPLSSSVSGCISPSRIKGKRKYGSRSKQETKSKLIPAGTTLEDGENCKGKRKMEIVEFSGKITHGDSPESMERLKESPVLAKSVFALKSYGPRMRNMER
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..41
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..153

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0006399.1Tan0006399.1mRNA