Tan0006308 (gene) Snake gourd v1

Overview
NameTan0006308
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCysteine-rich RLK (Receptor-like protein kinase) 8
LocationLG09: 72910451 .. 72913385 (-)
RNA-Seq ExpressionTan0006308
SyntenyTan0006308
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTCATTAATAATTTGAAACTCTTCTCCTCAATTCGTGCACTTTGATATGGTATCAGAGAGTAAGAAAAAGGATTCACGCGTGTATAATTGAGGATTCTCCCCTGCTGCGTCTTTCGCCATGGCTGCGACTTCAGGGACACGTCCTGCTTCGACTTCTTCCTTGGCAACCTCGTTTGATTCAAGCGCCATTGAAGCTCAACTAAATCCCTACTTACTTCATCATTATACCGCAACAACCACGTCTTTAGTCACAGAGTTGTTGATCGGAGCCAACAATTACATCTCGTGGAGCAAGGCCATGTTAATTGCTCTCTCAGGTAGAAATAAGTTAGGGTTTATCAACGGTACGATCAAGCGACCAGAAGGATCTTTTCTTAATGCCTGGCAGTGTAACAATGATATTGTTACTTCTTGGATTATCAATTCGATTTTGAAGAGCATTATTGTAAGCCTTGTATATACTGGATGCGCAAAGGATCTCTAGGATGAGTTGAAAGAGCGATATCGCCAGACGAATGGACCACGTATTTTCCAGTTGCGAAAACAACTAGTCACTACGATGCAGGGATCAATGACGGTGGAAGAATATTATACCAGAATCACCACGATTTGGCAAGAATTGGTGGAATTTCGCCCGATTGAGAACTGTAAATGCGGTGGTTTGAAGTCGATACTCGATTATCTTCAATCGAAATACGTGATGACCTTTTTAATGGGTCTAAATGACAGTTTCACTTCAATACGGGTGCAAATACTTCTAAGCGATCCTCTACCCACTATGAACAAAGTTTTTTCATTAATCATCCAAGAAGAATTACAGCGTTCCACAGGTGTTCTGCCTGTTGTTGAATCTATTGCTCTTGATGCACATTCTGGTAGTACTCGGAAGAGTTCTATCAATTTAACTCAGTCTCGTACTCAGAATCGTCGAGATGGACAACGACCTGTGTGTTCGCACTGTGGATCTAAAGGCCATGTAGTCGATCGGTGCTATAAACTACATGGTTATCCCCCTGGTCATAAACGTTACAATCCGTCTTTAACTAAAAGGAACACAGAAAATGGAGCACCAACGAGTTCCAAAAATCAGCAGTCAAGTCCCCAGTCGGCCTTCTTTGCAAGTCTCAATTCTGGCCAATACTCCCAATTGATGAATCTATTCCAGAGTCATCTCTCAAATGCTGAAACAAGTAGAATTCAGTCATTTGCTAATGAGACGAGTCATGTCGCAGGTACTTGTTTCTCCACCTCTCCCTCACCACATAATCTTTCTGTTGATGCTTAGGTTGTAGACTCTGGTGCATCAACTCACATATGTTATAACAAGTCCCTTTTCACGAGCATTAGGTCTGTTGATCATTTATCAGTAGCTTTACCTACTCAGACTCGTTTTAATGTTGAATATATTGGTGATGTGCGACTGACTGATGATTTCACTCTCCATGACGTTCTATTTCTCCCTTAGTTCGCGTATAATCAAATGTCAATCAGTGCATTGTTGAAAAATCAGAGATACTCTGTTAATTTTGTAGGAACATCTTGCTCCATTCAGGGCAGGTCTCCATTGAGGAAGATTGGCAGTGTTGATTTCATCAACAGACTCTATCTGTTTCATACAACCAAGGTTCCTACTACTTTTCATTATAGTTTTGTAGCACTGGTATGTACCTCTCCCACTACTTAGCATAGGAGGTTGGGACACTTATTTTTTGCTCAGCTAAATACTTTAAAAGGTTATTTACGGTTATCTACTGTTGATCATGCTACTGATTGTCATATCTTGCCCGTTGGCTAAGCAACGACGAATGCCTTTTCCATTTCAAAATCATGTTTTTGATTCTGTGTTTGCCCTGATTCACTGTGATGTATAGGGTCTCTTTAAAACCCCTACCTATGTTGATCAACGTTCTTTTTTACTTTGGTAGATGATTGCTCTCGATTTACTTAGGTATATCTTATGAAGAATAAGAATGATGCTTTGATTCTTGTGCCACGTTTCTTTGCAATGGTCAAAACTTAATTTTCTAAAACTATCAAAGTTTTTCGTTCAGAAAATGCGCCAGAATTGCGCTTTGAGAAGTTTCTTAAGTCCATCGGAACTTTACATCAATTTTCATGTGTTGCAACTCCCCAACAAAACTCTGTAGTTGAACGAAAGCATCAACATCTTTTAAATGTGGCACGTGCTCTTCTTTTTCAATCGAAAGTGCCCATCAAATTTTGGGGGGATTGTGTTCTTACAACATCATATTTGATCAATAAGACTCTTATGGCTTTCTTGTATAATAAATCTCCATTTATGGTGTTGTATAATAAAGATGTTGCTTATGGGCACCTTAGGATGTTTGGTTGTTTGGCATATGCCTCTACATACTGCCACACGATCTAAATTTGATCCACGGGCTCAACCTTGTGTGTTTCTCGGTTATCCGACTGGAATTAAAGGTTATAAGCTTTATAATATTGAGAAGGGACATATACTAATTTCCAGGGATGTTATACTCTTCGAGGACCTTTTTCCTTTCCAACATGTGGTTTCTCCAGCGACTTCTTCATCATTTATTGATGATTTTGTGTTGCATCAATCGCTGCTTGATATTTTTCAGCCACGCGATGAGATATCTTCCTCCACCTGCAACACAACATTTCCTAGCCCCTCGGCTAGTGCCCCACAACCGTAGCTCCTGATGAGTCCATTGCCTCTGCTGCTTTGCCTTTAGCAGTCCCTGGTGATGCACAGACTGATGTTCCTAGAAGGTCAACTCACAGTCAACGTCATCCCACATATCTTCGAGATTTCTCTTGCAACTTAGCAAGAAATTCCAAGAATGCTACTTCCAAGCCTTACCATCTCAGCTGTTGGGATATTTGTCCTAATCTCGTACTGTTTGTAAATATACATTTCAAATTAATAAAGAGTTATTCATTTCATCA

mRNA sequence

ATTCATTAATAATTTGAAACTCTTCTCCTCAATTCGTGCACTTTGATATGGTATCAGAGAGTAAGAAAAAGGATTCACGCGTGTATAATTGAGGATTCTCCCCTGCTGCGTCTTTCGCCATGGCTGCGACTTCAGGGACACGTCCTGCTTCGACTTCTTCCTTGGCAACCTCGTTTGATTCAAGCGCCATTGAAGCTCAACTAAATCCCTACTTACTTCATCATTATACCGCAACAACCACGTCTTTAGTCACAGAGTTGTTGATCGGAGCCAACAATTACATCTCGTGGAGCAAGGCCATGTTAATTGCTCTCTCAGGTAGAAATAAGTTAGGGTTTATCAACGGTACGATCAAGCGACCAGAAGGATCTTTTCTTAATGCCTGGCAGTGTAACAATGATATTGTTACTTCTTGGATTATCAATTCGATTTTGAAGAGCATTATTGTAAGCCTTGTATATACTGGATGCGCAAAGGATCTCTAGGATGAGTTGAAAGAGCGATATCGCCAGACGAATGGACCACGTATTTTCCAGTTGCGAAAACAACTAGTCACTACGATGCAGGGATCAATGACGGTGGAAGAATATTATACCAGAATCACCACGATTTGGCAAGAATTGGTGGAATTTCGCCCGATTGAGAACTGTAAATGCGGTGGTTTGAAGTCGATACTCGATTATCTTCAATCGAAATACGTGATGACCTTTTTAATGGGTCTAAATGACAGTTTCACTTCAATACGGGTGCAAATACTTCTAAGCGATCCTCTACCCACTATGAACAAAGTTTTTTCATTAATCATCCAAGAAGAATTACAGCGTTCCACAGGTGTTCTGCCTGTTGTTGAATCTATTGCTCTTGATGCACATTCTGGTAGTACTCGGAAGAGTTCTATCAATTTAACTCAGTCTCGTACTCAGAATCGTCGAGATGGACAACGACCTGTGTGTTCGCACTGTGGATCTAAAGGCCATGTAGTCGATCGGTGCTATAAACTACATGGTTATCCCCCTGGTCATAAACGTTACAATCCGTCTTTAACTAAAAGGAACACAGAAAATGGAGCACCAACGAGTTCCAAAAATCAGCAGTCAAGTCCCCAGTCGGCCTTCTTTGCAAGTCTCAATTCTGGCCAATACTCCCAATTGATGAATCTATTCCAGAGTCATCTCTCAAATGCTGAAACAAGTAGAATTCAGTCATTTGCTAATGAGACGAGTCATGTCGCAGGAACATCTTGCTCCATTCAGGGCAGGTCTCCATTGAGGAAGATTGGCAGTGTTGATTTCATCAACAGACTCTATCTGTTTCATACAACCAAGGTTCCTACTACTTTTCATTATAGTTTTGTAGCACTGGTATGTACCTCTCCCACTACTTAGCATAGGAGGTTGGGACACTTATTTTTTGCTCAGCTAAATACTTTAAAAGGTTATTTACGGTTATCTACTGTTGATCATGCTACTGATTGTCATATCTTGCCCGTTGGCTAAGCAACGACGAATGCCTTTTCCATTTCAAAATCATGTTTTTGATTCTGTGTTTGCCCTGATTCACTGTGATGTATAGGGTCTCTTTAAAACCCCTACCTATGTTGATCAACGTTCTTTTTTACTTTGGTAGATGATTGCTCTCGATTTACTTAGGTATATCTTATGAAGAATAAGAATGATGCTTTGATTCTTGTGCCACGTTTCTTTGCAATGGTCAAAACTTAATTTTCTAAAACTATCAAAGTTTTTCGTTCAGAAAATGCGCCAGAATTGCGCTTTGAGAAGTTTCTTAAGTCCATCGGAACTTTACATCAATTTTCATGTGTTGCAACTCCCCAACAAAACTCTGTAGTTGAACGAAAGCATCAACATCTTTTAAATGTGGCACGTGCTCTTCTTTTTCAATCGAAAGTGCCCATCAAATTTTGGGGGGATTGTGTTCTTACAACATCATATTTGATCAATAAGACTCTTATGGCTTTCTTGTATAATAAATCTCCATTTATGGTGTTGTATAATAAAGATGTTGCTTATGGGCACCTTAGGATGTTTGGTTGTTTGGCATATGCCTCTACATACTGCCACACGATCTAAATTTGATCCACGGGCTCAACCTTGTGTGTTTCTCGGTTATCCGACTGGAATTAAAGGTTATAAGCTTTATAATATTGAGAAGGGACATATACTAATTTCCAGGGATGTTATACTCTTCGAGGACCTTTTTCCTTTCCAACATGTGGTTTCTCCAGCGACTTCTTCATCATTTATTGATGATTTTGTGTTGCATCAATCGCTGCTTGATATTTTTCAGCCACGCGATGAGATATCTTCCTCCACCTGCAACACAACATTTCCTAGCCCCTCGGCTAGTGCCCCACAACCGTAGCTCCTGATGAGTCCATTGCCTCTGCTGCTTTGCCTTTAGCAGTCCCTGGTGATGCACAGACTGATGTTCCTAGAAGGTCAACTCACAGTCAACGTCATCCCACATATCTTCGAGATTTCTCTTGCAACTTAGCAAGAAATTCCAAGAATGCTACTTCCAAGCCTTACCATCTCAGCTGTTGGGATATTTGTCCTAATCTCGTACTGTTTGTAAATATACATTTCAAATTAATAAAGAGTTATTCATTTCATCA

Coding sequence (CDS)

ATGCAGGGATCAATGACGGTGGAAGAATATTATACCAGAATCACCACGATTTGGCAAGAATTGGTGGAATTTCGCCCGATTGAGAACTGTAAATGCGGTGGTTTGAAGTCGATACTCGATTATCTTCAATCGAAATACGTGATGACCTTTTTAATGGGTCTAAATGACAGTTTCACTTCAATACGGGTGCAAATACTTCTAAGCGATCCTCTACCCACTATGAACAAAGTTTTTTCATTAATCATCCAAGAAGAATTACAGCGTTCCACAGGTGTTCTGCCTGTTGTTGAATCTATTGCTCTTGATGCACATTCTGGTAGTACTCGGAAGAGTTCTATCAATTTAACTCAGTCTCGTACTCAGAATCGTCGAGATGGACAACGACCTGTGTGTTCGCACTGTGGATCTAAAGGCCATGTAGTCGATCGGTGCTATAAACTACATGGTTATCCCCCTGGTCATAAACGTTACAATCCGTCTTTAACTAAAAGGAACACAGAAAATGGAGCACCAACGAGTTCCAAAAATCAGCAGTCAAGTCCCCAGTCGGCCTTCTTTGCAAGTCTCAATTCTGGCCAATACTCCCAATTGATGAATCTATTCCAGAGTCATCTCTCAAATGCTGAAACAAGTAGAATTCAGTCATTTGCTAATGAGACGAGTCATGTCGCAGGAACATCTTGCTCCATTCAGGGCAGGTCTCCATTGAGGAAGATTGGCAGTGTTGATTTCATCAACAGACTCTATCTGTTTCATACAACCAAGGTTCCTACTACTTTTCATTATAGTTTTGTAGCACTGGTATGTACCTCTCCCACTACTTAG

Protein sequence

MQGSMTVEEYYTRITTIWQELVEFRPIENCKCGGLKSILDYLQSKYVMTFLMGLNDSFTSIRVQILLSDPLPTMNKVFSLIIQEELQRSTGVLPVVESIALDAHSGSTRKSSINLTQSRTQNRRDGQRPVCSHCGSKGHVVDRCYKLHGYPPGHKRYNPSLTKRNTENGAPTSSKNQQSSPQSAFFASLNSGQYSQLMNLFQSHLSNAETSRIQSFANETSHVAGTSCSIQGRSPLRKIGSVDFINRLYLFHTTKVPTTFHYSFVALVCTSPTT
Homology
BLAST of Tan0006308 vs. NCBI nr
Match: XP_022145891.1 (uncharacterized protein LOC111015239 [Momordica charantia])

HSP 1 Score: 203.8 bits (517), Expect = 2.0e-48
Identity = 114/247 (46.15%), Postives = 151/247 (61.13%), Query Frame = 0

Query: 1   MQGSMTVEEYYTRITTIWQELVEFRPIENCKCGGLKSILDYLQSKYVMTFLMGLNDSFTS 60
           +QG++++E YYT++ T+WQEL ++RP  +C C GLKS+ ++ QS+YVMTFLMGLN+S+  
Sbjct: 145 IQGTLSIEAYYTKLKTVWQELTDYRPTIDCTCSGLKSLSEFFQSEYVMTFLMGLNESYAK 204

Query: 61  IRVQILLSDPLPTMNKVFSLIIQEELQRSTGVL-PVVESIALDAHSGSTRKSSINLTQSR 120
           IR QILL DP+P MNKVFSL+IQEE QR+ G + P + S+A+     S R S+       
Sbjct: 205 IRAQILLMDPIPPMNKVFSLLIQEERQRAIGTINPPLPSMAMAVAEISKRNSA------- 264

Query: 121 TQNRRDGQRPVCSHCGSKGHVVDRCYKLHGYPPGHKRYNPSLTKRNTENGAPTSSKN--- 180
           TQ RR   R  C+HCG +GHV+D+CYKLHGYPPG++  NP+       N   TS  N   
Sbjct: 265 TQFRRKDNRSFCTHCGLRGHVIDKCYKLHGYPPGYRANNPAARIGQLHNPNGTSHSNGVV 324

Query: 181 ------------------QQSSPQSAFFASLNSGQYSQLMNLFQSHLSNAETSRIQSFAN 226
                             + S+   AFF SLNS QYSQLM + QSHL  A+   I     
Sbjct: 325 ANQVSEKNVDITSSPAIQRPSNSSPAFFNSLNSSQYSQLMEMLQSHLQAAKPETI----T 380

BLAST of Tan0006308 vs. NCBI nr
Match: KAA0065480.1 (Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa] >TYK08721.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa])

HSP 1 Score: 199.5 bits (506), Expect = 3.7e-47
Identity = 113/230 (49.13%), Postives = 154/230 (66.96%), Query Frame = 0

Query: 2   QGSMTVEEYYTRITTIWQELVEFRPIENCKCGGLKSILDYLQSKYVMTFLMGLNDSFTSI 61
           QG++T+E YYT++ TIWQ L E+R   +C CGGLK  +D+L+S+Y+M FLMGLNDS+ ++
Sbjct: 148 QGNLTIETYYTKLKTIWQNLNEYRFTNDCTCGGLKPFIDHLESEYIMAFLMGLNDSYAAV 207

Query: 62  RVQILLSDPLPTMNKVFSLIIQEELQRSTGVL-PVVESIALDAHSGSTRKSSINLTQSRT 121
           R QILL  PLP++N VFSL+IQEE QRS G+L P ++ +AL+  S        ++  S  
Sbjct: 208 RAQILLMQPLPSINTVFSLLIQEEQQRSAGILTPPIDPVALNIAS--------SMAISTD 267

Query: 122 QNRRDGQRPVCSHCGSKGHVVDRCYKLHGYPPGHK-RYNPSLT----KRNTENGAPTSSK 181
           +NR+  +RP CS+CG KGH+ D+CYK HGYPPG+K R + S+T       T N A T+S 
Sbjct: 268 RNRKK-ERPTCSYCGIKGHIADKCYKKHGYPPGYKPRNSNSITTAPDTSKTNNVANTNSA 327

Query: 182 NQQSSPQSAFFASLNSGQYSQLMNLFQSHLSNAETSRIQSFANETSHVAG 226
               SP   FF+SLNS QYSQLM L  +HL  A T+ I + A   +H +G
Sbjct: 328 AANRSPD--FFSSLNSEQYSQLMTLLNNHLQAATTAPITT-ATAITHTSG 365

BLAST of Tan0006308 vs. NCBI nr
Match: KAA8550199.1 (hypothetical protein F0562_001883 [Nyssa sinensis])

HSP 1 Score: 168.3 bits (425), Expect = 9.1e-38
Identity = 90/220 (40.91%), Postives = 137/220 (62.27%), Query Frame = 0

Query: 2   QGSMTVEEYYTRITTIWQELVEFRP---IENCKCGGLKSILDYLQSKYVMTFLMGLNDSF 61
           Q   +V  Y+T++ TIW+EL  +RP      C CGG+K+I D+ Q +Y+M+FLMGL+DSF
Sbjct: 80  QEQSSVSIYFTKLKTIWEELSNYRPNCSCGKCSCGGVKNINDHHQMEYIMSFLMGLDDSF 139

Query: 62  TSIRVQILLSDPLPTMNKVFSLIIQEELQR----------STGVLPVVESIALDAHSGST 121
           + +R Q+LL DP+P +N+VFSLI+QEE QR          STG +  V    ++   GS 
Sbjct: 140 SQVRGQLLLMDPMPPINRVFSLIVQEEQQRRTNPSSDSSNSTGTMAFVVKTDVNKSGGSG 199

Query: 122 RKSSINLTQSRTQNRRDGQRPVCSHCGSKGHVVDRCYKLHGYPPGHKRYNPSLTKRNTEN 181
            ++S N   S ++N++   +P C+HC  +GH VDRCYK+HGYP G+K  + + +      
Sbjct: 200 PQNSQNSNSSASKNQKK-DKPYCTHCKIRGHTVDRCYKIHGYPSGYKFRSNNNSNAAAHQ 259

Query: 182 GAPTSSKNQQSSPQSAFFASLNSGQYSQLMNLFQSHLSNA 209
            + +  +  QS+    FF +LNS QY QLM++  +HLS++
Sbjct: 260 VSTSDDRPDQSNSFGGFFQNLNSNQYQQLMSMLSTHLSSS 298

BLAST of Tan0006308 vs. NCBI nr
Match: KAA8523936.1 (hypothetical protein F0562_010359 [Nyssa sinensis])

HSP 1 Score: 164.9 bits (416), Expect = 1.0e-36
Identity = 96/248 (38.71%), Postives = 146/248 (58.87%), Query Frame = 0

Query: 2   QGSMTVEEYYTRITTIWQELVEFRP---IENCKCGGLKSILDYLQSKYVMTFLMGLNDSF 61
           Q   +V  Y+T++ TIW+EL   RP      C CGG+K++ D+ Q +Y+M+FLMGL+DSF
Sbjct: 92  QEQSSVSIYFTKLKTIWEELSNSRPNCSCGKCSCGGVKNLNDHHQMEYIMSFLMGLDDSF 151

Query: 62  TSIRVQILLSDPLPTMNKVFSLIIQEELQR----------STGVLPVVESIALDAHSGST 121
           + +R Q+LL DP+P +N+VFSLI+QEE QR          STG +     I +    GS 
Sbjct: 152 SQVRGQLLLMDPMPPINRVFSLIVQEEQQRKTNPSSDSSNSTGTMAFAVKIDVTKSDGSG 211

Query: 122 RKSSINLTQSRTQNRRDGQRPVCSHCGSKGHVVDRCYKLHGYPPGHKRYNPSLTKRNTEN 181
            ++S N   S ++N++   +P C+HC  +GH VDRCYK+HGYPPG+K  + +        
Sbjct: 212 PQNSQNSNSSASKNQK-RDKPYCTHCKIRGHTVDRCYKIHGYPPGYKFRSNNNFNAAAHQ 271

Query: 182 GAPTSSKNQQSSPQSAFFASLNSGQYSQLMNLFQSHLSNAETSRIQSFANETSHVAGTSC 237
            + +  +  QS+    F  +LNS QY QLM++  +HLS++         ++T+ +AG   
Sbjct: 272 VSTSDDRLDQSNSFGGFVQNLNSNQYQQLMSMLSTHLSSSTKVTNALDPSQTNCLAGICF 331

BLAST of Tan0006308 vs. NCBI nr
Match: KAA8536734.1 (hypothetical protein F0562_029212 [Nyssa sinensis])

HSP 1 Score: 164.5 bits (415), Expect = 1.3e-36
Identity = 91/223 (40.81%), Postives = 135/223 (60.54%), Query Frame = 0

Query: 2   QGSMTVEEYYTRITTIWQELVEFRP---IENCKCGGLKSILDYLQSKYVMTFLMGLNDSF 61
           Q   +V  Y+T++ TIW+EL  +RP      C CGG+K++ DY Q++Y+M+FLMGL+DSF
Sbjct: 150 QEQSSVSIYFTKVKTIWEELSNYRPNCSCGKCYCGGVKNLNDYHQTEYIMSFLMGLDDSF 209

Query: 62  TSIRVQILLSDPLPTMNKVFSLIIQEELQR----------STGVLPVV--ESIALDAHSG 121
           + +  Q+LL D +P +N+VFSLI+QEE QR          STG +  V    +A    SG
Sbjct: 210 SQVSGQLLLMDSMPPINRVFSLIVQEEQQRRTNLSSDSSNSTGTMAFVVKTDVAKSGGSG 269

Query: 122 STRKSSINLTQSRTQNRRDGQRPVCSHCGSKGHVVDRCYKLHGYPPGHKRYNPSLTKRNT 181
           S    + N + S+ Q R    RP C+HC   GH VDRCYK+HGYPPG+K  + + +    
Sbjct: 270 SQNSQNSNSSASKNQKR---DRPYCTHCKILGHTVDRCYKIHGYPPGYKFRSNNNSNAAA 329

Query: 182 ENGAPTSSKNQQSSPQSAFFASLNSGQYSQLMNLFQSHLSNAE 210
              + +  ++ QS+    F  +LNS QY QLM++  +HLS+++
Sbjct: 330 YQVSTSDDRSDQSNSFEGFVQNLNSNQYQQLMSMLSTHLSSSK 369

BLAST of Tan0006308 vs. ExPASy TrEMBL
Match: A0A6J1CXR2 (uncharacterized protein LOC111015239 OS=Momordica charantia OX=3673 GN=LOC111015239 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 9.5e-49
Identity = 114/247 (46.15%), Postives = 151/247 (61.13%), Query Frame = 0

Query: 1   MQGSMTVEEYYTRITTIWQELVEFRPIENCKCGGLKSILDYLQSKYVMTFLMGLNDSFTS 60
           +QG++++E YYT++ T+WQEL ++RP  +C C GLKS+ ++ QS+YVMTFLMGLN+S+  
Sbjct: 145 IQGTLSIEAYYTKLKTVWQELTDYRPTIDCTCSGLKSLSEFFQSEYVMTFLMGLNESYAK 204

Query: 61  IRVQILLSDPLPTMNKVFSLIIQEELQRSTGVL-PVVESIALDAHSGSTRKSSINLTQSR 120
           IR QILL DP+P MNKVFSL+IQEE QR+ G + P + S+A+     S R S+       
Sbjct: 205 IRAQILLMDPIPPMNKVFSLLIQEERQRAIGTINPPLPSMAMAVAEISKRNSA------- 264

Query: 121 TQNRRDGQRPVCSHCGSKGHVVDRCYKLHGYPPGHKRYNPSLTKRNTENGAPTSSKN--- 180
           TQ RR   R  C+HCG +GHV+D+CYKLHGYPPG++  NP+       N   TS  N   
Sbjct: 265 TQFRRKDNRSFCTHCGLRGHVIDKCYKLHGYPPGYRANNPAARIGQLHNPNGTSHSNGVV 324

Query: 181 ------------------QQSSPQSAFFASLNSGQYSQLMNLFQSHLSNAETSRIQSFAN 226
                             + S+   AFF SLNS QYSQLM + QSHL  A+   I     
Sbjct: 325 ANQVSEKNVDITSSPAIQRPSNSSPAFFNSLNSSQYSQLMEMLQSHLQAAKPETI----T 380

BLAST of Tan0006308 vs. ExPASy TrEMBL
Match: A0A5A7VE66 (Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold76G00250 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 1.8e-47
Identity = 113/230 (49.13%), Postives = 154/230 (66.96%), Query Frame = 0

Query: 2   QGSMTVEEYYTRITTIWQELVEFRPIENCKCGGLKSILDYLQSKYVMTFLMGLNDSFTSI 61
           QG++T+E YYT++ TIWQ L E+R   +C CGGLK  +D+L+S+Y+M FLMGLNDS+ ++
Sbjct: 148 QGNLTIETYYTKLKTIWQNLNEYRFTNDCTCGGLKPFIDHLESEYIMAFLMGLNDSYAAV 207

Query: 62  RVQILLSDPLPTMNKVFSLIIQEELQRSTGVL-PVVESIALDAHSGSTRKSSINLTQSRT 121
           R QILL  PLP++N VFSL+IQEE QRS G+L P ++ +AL+  S        ++  S  
Sbjct: 208 RAQILLMQPLPSINTVFSLLIQEEQQRSAGILTPPIDPVALNIAS--------SMAISTD 267

Query: 122 QNRRDGQRPVCSHCGSKGHVVDRCYKLHGYPPGHK-RYNPSLT----KRNTENGAPTSSK 181
           +NR+  +RP CS+CG KGH+ D+CYK HGYPPG+K R + S+T       T N A T+S 
Sbjct: 268 RNRKK-ERPTCSYCGIKGHIADKCYKKHGYPPGYKPRNSNSITTAPDTSKTNNVANTNSA 327

Query: 182 NQQSSPQSAFFASLNSGQYSQLMNLFQSHLSNAETSRIQSFANETSHVAG 226
               SP   FF+SLNS QYSQLM L  +HL  A T+ I + A   +H +G
Sbjct: 328 AANRSPD--FFSSLNSEQYSQLMTLLNNHLQAATTAPITT-ATAITHTSG 365

BLAST of Tan0006308 vs. ExPASy TrEMBL
Match: A0A5J5C4X6 (Retrotran_gag_3 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_001883 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 4.4e-38
Identity = 90/220 (40.91%), Postives = 137/220 (62.27%), Query Frame = 0

Query: 2   QGSMTVEEYYTRITTIWQELVEFRP---IENCKCGGLKSILDYLQSKYVMTFLMGLNDSF 61
           Q   +V  Y+T++ TIW+EL  +RP      C CGG+K+I D+ Q +Y+M+FLMGL+DSF
Sbjct: 80  QEQSSVSIYFTKLKTIWEELSNYRPNCSCGKCSCGGVKNINDHHQMEYIMSFLMGLDDSF 139

Query: 62  TSIRVQILLSDPLPTMNKVFSLIIQEELQR----------STGVLPVVESIALDAHSGST 121
           + +R Q+LL DP+P +N+VFSLI+QEE QR          STG +  V    ++   GS 
Sbjct: 140 SQVRGQLLLMDPMPPINRVFSLIVQEEQQRRTNPSSDSSNSTGTMAFVVKTDVNKSGGSG 199

Query: 122 RKSSINLTQSRTQNRRDGQRPVCSHCGSKGHVVDRCYKLHGYPPGHKRYNPSLTKRNTEN 181
            ++S N   S ++N++   +P C+HC  +GH VDRCYK+HGYP G+K  + + +      
Sbjct: 200 PQNSQNSNSSASKNQKK-DKPYCTHCKIRGHTVDRCYKIHGYPSGYKFRSNNNSNAAAHQ 259

Query: 182 GAPTSSKNQQSSPQSAFFASLNSGQYSQLMNLFQSHLSNA 209
            + +  +  QS+    FF +LNS QY QLM++  +HLS++
Sbjct: 260 VSTSDDRPDQSNSFGGFFQNLNSNQYQQLMSMLSTHLSSS 298

BLAST of Tan0006308 vs. ExPASy TrEMBL
Match: A0A5J5A1K4 (Retrotrans_gag domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_010359 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 4.9e-37
Identity = 96/248 (38.71%), Postives = 146/248 (58.87%), Query Frame = 0

Query: 2   QGSMTVEEYYTRITTIWQELVEFRP---IENCKCGGLKSILDYLQSKYVMTFLMGLNDSF 61
           Q   +V  Y+T++ TIW+EL   RP      C CGG+K++ D+ Q +Y+M+FLMGL+DSF
Sbjct: 92  QEQSSVSIYFTKLKTIWEELSNSRPNCSCGKCSCGGVKNLNDHHQMEYIMSFLMGLDDSF 151

Query: 62  TSIRVQILLSDPLPTMNKVFSLIIQEELQR----------STGVLPVVESIALDAHSGST 121
           + +R Q+LL DP+P +N+VFSLI+QEE QR          STG +     I +    GS 
Sbjct: 152 SQVRGQLLLMDPMPPINRVFSLIVQEEQQRKTNPSSDSSNSTGTMAFAVKIDVTKSDGSG 211

Query: 122 RKSSINLTQSRTQNRRDGQRPVCSHCGSKGHVVDRCYKLHGYPPGHKRYNPSLTKRNTEN 181
            ++S N   S ++N++   +P C+HC  +GH VDRCYK+HGYPPG+K  + +        
Sbjct: 212 PQNSQNSNSSASKNQK-RDKPYCTHCKIRGHTVDRCYKIHGYPPGYKFRSNNNFNAAAHQ 271

Query: 182 GAPTSSKNQQSSPQSAFFASLNSGQYSQLMNLFQSHLSNAETSRIQSFANETSHVAGTSC 237
            + +  +  QS+    F  +LNS QY QLM++  +HLS++         ++T+ +AG   
Sbjct: 272 VSTSDDRLDQSNSFGGFVQNLNSNQYQQLMSMLSTHLSSSTKVTNALDPSQTNCLAGICF 331

BLAST of Tan0006308 vs. ExPASy TrEMBL
Match: A0A5J5B2C5 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_029212 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 6.4e-37
Identity = 91/223 (40.81%), Postives = 135/223 (60.54%), Query Frame = 0

Query: 2   QGSMTVEEYYTRITTIWQELVEFRP---IENCKCGGLKSILDYLQSKYVMTFLMGLNDSF 61
           Q   +V  Y+T++ TIW+EL  +RP      C CGG+K++ DY Q++Y+M+FLMGL+DSF
Sbjct: 150 QEQSSVSIYFTKVKTIWEELSNYRPNCSCGKCYCGGVKNLNDYHQTEYIMSFLMGLDDSF 209

Query: 62  TSIRVQILLSDPLPTMNKVFSLIIQEELQR----------STGVLPVV--ESIALDAHSG 121
           + +  Q+LL D +P +N+VFSLI+QEE QR          STG +  V    +A    SG
Sbjct: 210 SQVSGQLLLMDSMPPINRVFSLIVQEEQQRRTNLSSDSSNSTGTMAFVVKTDVAKSGGSG 269

Query: 122 STRKSSINLTQSRTQNRRDGQRPVCSHCGSKGHVVDRCYKLHGYPPGHKRYNPSLTKRNT 181
           S    + N + S+ Q R    RP C+HC   GH VDRCYK+HGYPPG+K  + + +    
Sbjct: 270 SQNSQNSNSSASKNQKR---DRPYCTHCKILGHTVDRCYKIHGYPPGYKFRSNNNSNAAA 329

Query: 182 ENGAPTSSKNQQSSPQSAFFASLNSGQYSQLMNLFQSHLSNAE 210
              + +  ++ QS+    F  +LNS QY QLM++  +HLS+++
Sbjct: 330 YQVSTSDDRSDQSNSFEGFVQNLNSNQYQQLMSMLSTHLSSSK 369

BLAST of Tan0006308 vs. TAIR 10
Match: AT1G21280.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 60.8 bits (146), Expect = 1.9e-09
Identity = 30/91 (32.97%), Postives = 51/91 (56.04%), Query Frame = 0

Query: 2   QGSMTVEEYYTRITTIWQELVEFRPIENCKCGG-----LKSILDYLQSKYVMTFLMG--L 61
           QG  +VEEY+ +++ +W EL E+ PI  CKCGG      K   +  + +    FLMG  L
Sbjct: 139 QGGDSVEEYFGKLSKVWMELSEYAPIPECKCGGCNCECTKRAEEAREKEQRYEFLMGLKL 198

Query: 62  NDSFTSIRVQILLSDPLPTMNKVFSLIIQEE 86
           N  F ++  +I+   P P++++ F+++   E
Sbjct: 199 NQGFEAVTTKIMFQKPPPSLHEAFAMVKDAE 229

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022145891.12.0e-4846.15uncharacterized protein LOC111015239 [Momordica charantia][more]
KAA0065480.13.7e-4749.13Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa] >T... [more]
KAA8550199.19.1e-3840.91hypothetical protein F0562_001883 [Nyssa sinensis][more]
KAA8523936.11.0e-3638.71hypothetical protein F0562_010359 [Nyssa sinensis][more]
KAA8536734.11.3e-3640.81hypothetical protein F0562_029212 [Nyssa sinensis][more]
Match NameE-valueIdentityDescription
A0A6J1CXR29.5e-4946.15uncharacterized protein LOC111015239 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
A0A5A7VE661.8e-4749.13Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa O... [more]
A0A5J5C4X64.4e-3840.91Retrotran_gag_3 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_0... [more]
A0A5J5A1K44.9e-3738.71Retrotrans_gag domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_01... [more]
A0A5J5B2C56.4e-3740.81Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_029212 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G21280.11.9e-0932.97CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Ha... [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 162..182
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 155..182
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 110..127
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 110..131
NoneNo IPR availablePANTHERPTHR34222:SF6OS02G0671800 PROTEINcoord: 2..204
NoneNo IPR availablePANTHERPTHR34222FAMILY NOT NAMEDcoord: 2..204

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0006308.1Tan0006308.1mRNA