Tan0006308 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTCATTAATAATTTGAAACTCTTCTCCTCAATTCGTGCACTTTGATATGGTATCAGAGAGTAAGAAAAAGGATTCACGCGTGTATAATTGAGGATTCTCCCCTGCTGCGTCTTTCGCCATGGCTGCGACTTCAGGGACACGTCCTGCTTCGACTTCTTCCTTGGCAACCTCGTTTGATTCAAGCGCCATTGAAGCTCAACTAAATCCCTACTTACTTCATCATTATACCGCAACAACCACGTCTTTAGTCACAGAGTTGTTGATCGGAGCCAACAATTACATCTCGTGGAGCAAGGCCATGTTAATTGCTCTCTCAGGTAGAAATAAGTTAGGGTTTATCAACGGTACGATCAAGCGACCAGAAGGATCTTTTCTTAATGCCTGGCAGTGTAACAATGATATTGTTACTTCTTGGATTATCAATTCGATTTTGAAGAGCATTATTGTAAGCCTTGTATATACTGGATGCGCAAAGGATCTCTAGGATGAGTTGAAAGAGCGATATCGCCAGACGAATGGACCACGTATTTTCCAGTTGCGAAAACAACTAGTCACTACGATGCAGGGATCAATGACGGTGGAAGAATATTATACCAGAATCACCACGATTTGGCAAGAATTGGTGGAATTTCGCCCGATTGAGAACTGTAAATGCGGTGGTTTGAAGTCGATACTCGATTATCTTCAATCGAAATACGTGATGACCTTTTTAATGGGTCTAAATGACAGTTTCACTTCAATACGGGTGCAAATACTTCTAAGCGATCCTCTACCCACTATGAACAAAGTTTTTTCATTAATCATCCAAGAAGAATTACAGCGTTCCACAGGTGTTCTGCCTGTTGTTGAATCTATTGCTCTTGATGCACATTCTGGTAGTACTCGGAAGAGTTCTATCAATTTAACTCAGTCTCGTACTCAGAATCGTCGAGATGGACAACGACCTGTGTGTTCGCACTGTGGATCTAAAGGCCATGTAGTCGATCGGTGCTATAAACTACATGGTTATCCCCCTGGTCATAAACGTTACAATCCGTCTTTAACTAAAAGGAACACAGAAAATGGAGCACCAACGAGTTCCAAAAATCAGCAGTCAAGTCCCCAGTCGGCCTTCTTTGCAAGTCTCAATTCTGGCCAATACTCCCAATTGATGAATCTATTCCAGAGTCATCTCTCAAATGCTGAAACAAGTAGAATTCAGTCATTTGCTAATGAGACGAGTCATGTCGCAGGTACTTGTTTCTCCACCTCTCCCTCACCACATAATCTTTCTGTTGATGCTTAGGTTGTAGACTCTGGTGCATCAACTCACATATGTTATAACAAGTCCCTTTTCACGAGCATTAGGTCTGTTGATCATTTATCAGTAGCTTTACCTACTCAGACTCGTTTTAATGTTGAATATATTGGTGATGTGCGACTGACTGATGATTTCACTCTCCATGACGTTCTATTTCTCCCTTAGTTCGCGTATAATCAAATGTCAATCAGTGCATTGTTGAAAAATCAGAGATACTCTGTTAATTTTGTAGGAACATCTTGCTCCATTCAGGGCAGGTCTCCATTGAGGAAGATTGGCAGTGTTGATTTCATCAACAGACTCTATCTGTTTCATACAACCAAGGTTCCTACTACTTTTCATTATAGTTTTGTAGCACTGGTATGTACCTCTCCCACTACTTAGCATAGGAGGTTGGGACACTTATTTTTTGCTCAGCTAAATACTTTAAAAGGTTATTTACGGTTATCTACTGTTGATCATGCTACTGATTGTCATATCTTGCCCGTTGGCTAAGCAACGACGAATGCCTTTTCCATTTCAAAATCATGTTTTTGATTCTGTGTTTGCCCTGATTCACTGTGATGTATAGGGTCTCTTTAAAACCCCTACCTATGTTGATCAACGTTCTTTTTTACTTTGGTAGATGATTGCTCTCGATTTACTTAGGTATATCTTATGAAGAATAAGAATGATGCTTTGATTCTTGTGCCACGTTTCTTTGCAATGGTCAAAACTTAATTTTCTAAAACTATCAAAGTTTTTCGTTCAGAAAATGCGCCAGAATTGCGCTTTGAGAAGTTTCTTAAGTCCATCGGAACTTTACATCAATTTTCATGTGTTGCAACTCCCCAACAAAACTCTGTAGTTGAACGAAAGCATCAACATCTTTTAAATGTGGCACGTGCTCTTCTTTTTCAATCGAAAGTGCCCATCAAATTTTGGGGGGATTGTGTTCTTACAACATCATATTTGATCAATAAGACTCTTATGGCTTTCTTGTATAATAAATCTCCATTTATGGTGTTGTATAATAAAGATGTTGCTTATGGGCACCTTAGGATGTTTGGTTGTTTGGCATATGCCTCTACATACTGCCACACGATCTAAATTTGATCCACGGGCTCAACCTTGTGTGTTTCTCGGTTATCCGACTGGAATTAAAGGTTATAAGCTTTATAATATTGAGAAGGGACATATACTAATTTCCAGGGATGTTATACTCTTCGAGGACCTTTTTCCTTTCCAACATGTGGTTTCTCCAGCGACTTCTTCATCATTTATTGATGATTTTGTGTTGCATCAATCGCTGCTTGATATTTTTCAGCCACGCGATGAGATATCTTCCTCCACCTGCAACACAACATTTCCTAGCCCCTCGGCTAGTGCCCCACAACCGTAGCTCCTGATGAGTCCATTGCCTCTGCTGCTTTGCCTTTAGCAGTCCCTGGTGATGCACAGACTGATGTTCCTAGAAGGTCAACTCACAGTCAACGTCATCCCACATATCTTCGAGATTTCTCTTGCAACTTAGCAAGAAATTCCAAGAATGCTACTTCCAAGCCTTACCATCTCAGCTGTTGGGATATTTGTCCTAATCTCGTACTGTTTGTAAATATACATTTCAAATTAATAAAGAGTTATTCATTTCATCA ATTCATTAATAATTTGAAACTCTTCTCCTCAATTCGTGCACTTTGATATGGTATCAGAGAGTAAGAAAAAGGATTCACGCGTGTATAATTGAGGATTCTCCCCTGCTGCGTCTTTCGCCATGGCTGCGACTTCAGGGACACGTCCTGCTTCGACTTCTTCCTTGGCAACCTCGTTTGATTCAAGCGCCATTGAAGCTCAACTAAATCCCTACTTACTTCATCATTATACCGCAACAACCACGTCTTTAGTCACAGAGTTGTTGATCGGAGCCAACAATTACATCTCGTGGAGCAAGGCCATGTTAATTGCTCTCTCAGGTAGAAATAAGTTAGGGTTTATCAACGGTACGATCAAGCGACCAGAAGGATCTTTTCTTAATGCCTGGCAGTGTAACAATGATATTGTTACTTCTTGGATTATCAATTCGATTTTGAAGAGCATTATTGTAAGCCTTGTATATACTGGATGCGCAAAGGATCTCTAGGATGAGTTGAAAGAGCGATATCGCCAGACGAATGGACCACGTATTTTCCAGTTGCGAAAACAACTAGTCACTACGATGCAGGGATCAATGACGGTGGAAGAATATTATACCAGAATCACCACGATTTGGCAAGAATTGGTGGAATTTCGCCCGATTGAGAACTGTAAATGCGGTGGTTTGAAGTCGATACTCGATTATCTTCAATCGAAATACGTGATGACCTTTTTAATGGGTCTAAATGACAGTTTCACTTCAATACGGGTGCAAATACTTCTAAGCGATCCTCTACCCACTATGAACAAAGTTTTTTCATTAATCATCCAAGAAGAATTACAGCGTTCCACAGGTGTTCTGCCTGTTGTTGAATCTATTGCTCTTGATGCACATTCTGGTAGTACTCGGAAGAGTTCTATCAATTTAACTCAGTCTCGTACTCAGAATCGTCGAGATGGACAACGACCTGTGTGTTCGCACTGTGGATCTAAAGGCCATGTAGTCGATCGGTGCTATAAACTACATGGTTATCCCCCTGGTCATAAACGTTACAATCCGTCTTTAACTAAAAGGAACACAGAAAATGGAGCACCAACGAGTTCCAAAAATCAGCAGTCAAGTCCCCAGTCGGCCTTCTTTGCAAGTCTCAATTCTGGCCAATACTCCCAATTGATGAATCTATTCCAGAGTCATCTCTCAAATGCTGAAACAAGTAGAATTCAGTCATTTGCTAATGAGACGAGTCATGTCGCAGGAACATCTTGCTCCATTCAGGGCAGGTCTCCATTGAGGAAGATTGGCAGTGTTGATTTCATCAACAGACTCTATCTGTTTCATACAACCAAGGTTCCTACTACTTTTCATTATAGTTTTGTAGCACTGGTATGTACCTCTCCCACTACTTAGCATAGGAGGTTGGGACACTTATTTTTTGCTCAGCTAAATACTTTAAAAGGTTATTTACGGTTATCTACTGTTGATCATGCTACTGATTGTCATATCTTGCCCGTTGGCTAAGCAACGACGAATGCCTTTTCCATTTCAAAATCATGTTTTTGATTCTGTGTTTGCCCTGATTCACTGTGATGTATAGGGTCTCTTTAAAACCCCTACCTATGTTGATCAACGTTCTTTTTTACTTTGGTAGATGATTGCTCTCGATTTACTTAGGTATATCTTATGAAGAATAAGAATGATGCTTTGATTCTTGTGCCACGTTTCTTTGCAATGGTCAAAACTTAATTTTCTAAAACTATCAAAGTTTTTCGTTCAGAAAATGCGCCAGAATTGCGCTTTGAGAAGTTTCTTAAGTCCATCGGAACTTTACATCAATTTTCATGTGTTGCAACTCCCCAACAAAACTCTGTAGTTGAACGAAAGCATCAACATCTTTTAAATGTGGCACGTGCTCTTCTTTTTCAATCGAAAGTGCCCATCAAATTTTGGGGGGATTGTGTTCTTACAACATCATATTTGATCAATAAGACTCTTATGGCTTTCTTGTATAATAAATCTCCATTTATGGTGTTGTATAATAAAGATGTTGCTTATGGGCACCTTAGGATGTTTGGTTGTTTGGCATATGCCTCTACATACTGCCACACGATCTAAATTTGATCCACGGGCTCAACCTTGTGTGTTTCTCGGTTATCCGACTGGAATTAAAGGTTATAAGCTTTATAATATTGAGAAGGGACATATACTAATTTCCAGGGATGTTATACTCTTCGAGGACCTTTTTCCTTTCCAACATGTGGTTTCTCCAGCGACTTCTTCATCATTTATTGATGATTTTGTGTTGCATCAATCGCTGCTTGATATTTTTCAGCCACGCGATGAGATATCTTCCTCCACCTGCAACACAACATTTCCTAGCCCCTCGGCTAGTGCCCCACAACCGTAGCTCCTGATGAGTCCATTGCCTCTGCTGCTTTGCCTTTAGCAGTCCCTGGTGATGCACAGACTGATGTTCCTAGAAGGTCAACTCACAGTCAACGTCATCCCACATATCTTCGAGATTTCTCTTGCAACTTAGCAAGAAATTCCAAGAATGCTACTTCCAAGCCTTACCATCTCAGCTGTTGGGATATTTGTCCTAATCTCGTACTGTTTGTAAATATACATTTCAAATTAATAAAGAGTTATTCATTTCATCA ATGCAGGGATCAATGACGGTGGAAGAATATTATACCAGAATCACCACGATTTGGCAAGAATTGGTGGAATTTCGCCCGATTGAGAACTGTAAATGCGGTGGTTTGAAGTCGATACTCGATTATCTTCAATCGAAATACGTGATGACCTTTTTAATGGGTCTAAATGACAGTTTCACTTCAATACGGGTGCAAATACTTCTAAGCGATCCTCTACCCACTATGAACAAAGTTTTTTCATTAATCATCCAAGAAGAATTACAGCGTTCCACAGGTGTTCTGCCTGTTGTTGAATCTATTGCTCTTGATGCACATTCTGGTAGTACTCGGAAGAGTTCTATCAATTTAACTCAGTCTCGTACTCAGAATCGTCGAGATGGACAACGACCTGTGTGTTCGCACTGTGGATCTAAAGGCCATGTAGTCGATCGGTGCTATAAACTACATGGTTATCCCCCTGGTCATAAACGTTACAATCCGTCTTTAACTAAAAGGAACACAGAAAATGGAGCACCAACGAGTTCCAAAAATCAGCAGTCAAGTCCCCAGTCGGCCTTCTTTGCAAGTCTCAATTCTGGCCAATACTCCCAATTGATGAATCTATTCCAGAGTCATCTCTCAAATGCTGAAACAAGTAGAATTCAGTCATTTGCTAATGAGACGAGTCATGTCGCAGGAACATCTTGCTCCATTCAGGGCAGGTCTCCATTGAGGAAGATTGGCAGTGTTGATTTCATCAACAGACTCTATCTGTTTCATACAACCAAGGTTCCTACTACTTTTCATTATAGTTTTGTAGCACTGGTATGTACCTCTCCCACTACTTAG MQGSMTVEEYYTRITTIWQELVEFRPIENCKCGGLKSILDYLQSKYVMTFLMGLNDSFTSIRVQILLSDPLPTMNKVFSLIIQEELQRSTGVLPVVESIALDAHSGSTRKSSINLTQSRTQNRRDGQRPVCSHCGSKGHVVDRCYKLHGYPPGHKRYNPSLTKRNTENGAPTSSKNQQSSPQSAFFASLNSGQYSQLMNLFQSHLSNAETSRIQSFANETSHVAGTSCSIQGRSPLRKIGSVDFINRLYLFHTTKVPTTFHYSFVALVCTSPTT Homology
BLAST of Tan0006308 vs. NCBI nr
Match: XP_022145891.1 (uncharacterized protein LOC111015239 [Momordica charantia]) HSP 1 Score: 203.8 bits (517), Expect = 2.0e-48 Identity = 114/247 (46.15%), Postives = 151/247 (61.13%), Query Frame = 0
BLAST of Tan0006308 vs. NCBI nr
Match: KAA0065480.1 (Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa] >TYK08721.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa]) HSP 1 Score: 199.5 bits (506), Expect = 3.7e-47 Identity = 113/230 (49.13%), Postives = 154/230 (66.96%), Query Frame = 0
BLAST of Tan0006308 vs. NCBI nr
Match: KAA8550199.1 (hypothetical protein F0562_001883 [Nyssa sinensis]) HSP 1 Score: 168.3 bits (425), Expect = 9.1e-38 Identity = 90/220 (40.91%), Postives = 137/220 (62.27%), Query Frame = 0
BLAST of Tan0006308 vs. NCBI nr
Match: KAA8523936.1 (hypothetical protein F0562_010359 [Nyssa sinensis]) HSP 1 Score: 164.9 bits (416), Expect = 1.0e-36 Identity = 96/248 (38.71%), Postives = 146/248 (58.87%), Query Frame = 0
BLAST of Tan0006308 vs. NCBI nr
Match: KAA8536734.1 (hypothetical protein F0562_029212 [Nyssa sinensis]) HSP 1 Score: 164.5 bits (415), Expect = 1.3e-36 Identity = 91/223 (40.81%), Postives = 135/223 (60.54%), Query Frame = 0
BLAST of Tan0006308 vs. ExPASy TrEMBL
Match: A0A6J1CXR2 (uncharacterized protein LOC111015239 OS=Momordica charantia OX=3673 GN=LOC111015239 PE=4 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 9.5e-49 Identity = 114/247 (46.15%), Postives = 151/247 (61.13%), Query Frame = 0
BLAST of Tan0006308 vs. ExPASy TrEMBL
Match: A0A5A7VE66 (Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold76G00250 PE=4 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 1.8e-47 Identity = 113/230 (49.13%), Postives = 154/230 (66.96%), Query Frame = 0
BLAST of Tan0006308 vs. ExPASy TrEMBL
Match: A0A5J5C4X6 (Retrotran_gag_3 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_001883 PE=4 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 4.4e-38 Identity = 90/220 (40.91%), Postives = 137/220 (62.27%), Query Frame = 0
BLAST of Tan0006308 vs. ExPASy TrEMBL
Match: A0A5J5A1K4 (Retrotrans_gag domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_010359 PE=4 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 4.9e-37 Identity = 96/248 (38.71%), Postives = 146/248 (58.87%), Query Frame = 0
BLAST of Tan0006308 vs. ExPASy TrEMBL
Match: A0A5J5B2C5 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_029212 PE=4 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 6.4e-37 Identity = 91/223 (40.81%), Postives = 135/223 (60.54%), Query Frame = 0
BLAST of Tan0006308 vs. TAIR 10
Match: AT1G21280.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 60.8 bits (146), Expect = 1.9e-09 Identity = 30/91 (32.97%), Postives = 51/91 (56.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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