Tan0006294 (gene) Snake gourd v1

Overview


Name	Tan0006294
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Mitochondrial import inner membrane translocase subunit
Location	LG09: 73733799 .. 73736208 (-)
RNA-Seq Expression	Tan0006294
Synteny	Tan0006294

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATCACACGAAACCAGACTCACCGTTTCTCTTTCACTTTCTCGTTTCCGGGGCGTTAGGGTTTTGCAGTCAGTCACGTCTGGGAATATTCACGGGCTTTAGCGACTCAATAGTTTGGTGGTCATCAACCTTCCTAAGTTGCCATGGATTCCTCGTCTCTTAACTCCCCGGAGCTGATGAATTTTATCAATGTGAGCTCATTATCATCTTTTTTAATTGTCATTTCTACGCTCGATCTCTAATTATTTCTTGTCTTTTAACTCAATATTATATATGTCTTTGATATAAAATCCGATAATTGAGAATTTCTGATTTATTTTCCCATCAATATGCTATTTGGTTGCTTTTTATTGCCTCTATATTCATCTCCTGTCTAGTTTGTAGAATGCCCGAGGGTGGTGAAATTGATAACAGTCATGATTATTTCTGTGCTTTCTAATTTATAGGGACTTGACAGCTTTGATATTTATTCATGAACTATTTAATGTCAAATAGAACGTAATACTTTTGCAAGAGACTATTACGTAGAAGCAATGAACAGAGTGCTTGAAACAGACGCTTATATTGACCCAGTTTAATGATAAATCTTAACTTCTTGAAAGTAGCCTGTTATATTTACAGATTTGAGTTTGTCTCTAAATGTGAAATGAGTTAAATGTGCTCTCCATCGTTCTGCATCCTGAGTTTAGGAGAAACATATTTTGATTATATTTTATATCAAAGAATTTGAACTCTCTAGGTTGTAGAAGCAACTTCTTAATTTCCTCCAAGATGAGCTTTGAAGGTGTAAATTAGGTCTTAAGACTTTAGAGATGCCACTTGATGATTGTACTGCTCTGTGGAATATTAATATATCCAAATCTGGAAACAATAGATGCGCTGTTTTTTTTTTTTTTCCTTTTCTAGAGAACAGAAAGAATCATTTTCCCATATAGAGATATTCAATGAGTTTAATCGCCATGCAAGTAATGATAGGCTACAGAGTTCCATGGGTTCATATCACTTAAAAGATCTGAGTTTGTCTGAATTTGAGGTTACAGTACGATTTAATTAAGCTAATGTAAGATGTTCCATTTGATTTGTTGCCTCGACTAGTAAAATTGTAATAATTGAGTGTGTTACATCACCAATCAACTCAAAAGCTTAATGATAGGTTATGGTGAATTTAATTATATCATCACTCCAACATTCCTTCTTACTTGTGGGCTTGAAAATTTGTAGAAAGACCCAACAAGTTGAAATCAATGTTAATTGGGAATGAATTGACATATGTGGAGCTTGAACACAGGACCTACTATCCTTATTCCATGTTAAATCACCAATAAAAACCTAAAACCTTAAGCTGATAGGATACGTTAAATTTAATTATATCAACACTCCAATAAAGTGTCATCGAAATTGTGTTTTTATTGATCTTCATCTTACCAACCATAGGGAGCAATTAGTTGACTCCTAAATCTGTATTGCCTGCCCTTCAACTGCACAACCTCCTGCGTTTTCATTCCTGGATTTGACCCCTCCTCCATTCTAGAATTTAGATAGCAGGATGCTTTGTTGTGTGACTTCTATTTGTTGTAATGTCACAATTTAATGCTATTGGTAATTATTTGGTCACTTTGTTAAACAGGAAGAGAAGCAAAGAGCTATGGTTGCTGAGATGGTGGCTAAGCTTACCAGTGTGTGTTGGGACAAGTGTATCACTGGTACGCCTGGGAGTAAGTTCAGCTCTAGTGAATCCAACTGTCTATCAAACTGTGCCCAGCGCTATATGGATATGAGCATCATCATTATGAAACGATTCCAAAACAGTTGATGGATCTCCATGGGAGGGAGATTTTCCAGTTACAAGACAATATATATTTTCTTGGATCTATTGTTCAATTCAAACCGAAAGAAAAAGGGTCTGAACTTGTGGAAGTATTCTTCATTTTTTAGAGTTGATGCATTGCCCAAATCAGATTATTTTACATCTCGTTGAGAAAATTACTGAATTGAAATGGGGTAGCCCGTTGTAGTTTTTGTTATATGTAGTGTTGAGTTTTGGAATGTGCCTTGGATGTCAACTAGCTGCTTATTTGAAATTCCAGGAGGAAGGGCCCAATGTGGATGAATCGCAAGGGTAGGCATTCCATGCAATTGGTTGGAAGTAGCTAACATTGAATAATTTTTCCTTTTTCAAGTTCTTAATTGATGACATGTCATAGTTGCACAATGTGAATCATTTTAACACCTAGATTATGCTTTCAGCCTAAAAAAGCTCTATCCTCTTTAACTTTCAACCATCTTTATCTCTCTAAAGGTTATAGTTTGAGACCAATAAAAGTAAAGAGCTGTGAATATTGAAAGAACTTCCGTCGGTAGAGCATGGTTTGATTCATGCTCGTTTTTATGCAAGTTCTATTACAGTGGAG

mRNA sequence

CATCACACGAAACCAGACTCACCGTTTCTCTTTCACTTTCTCGTTTCCGGGGCGTTAGGGTTTTGCAGTCAGTCACGTCTGGGAATATTCACGGGCTTTAGCGACTCAATAGTTTGGTGGTCATCAACCTTCCTAAGTTGCCATGGATTCCTCGTCTCTTAACTCCCCGGAGCTGATGAATTTTATCAATGAAGAGAAGCAAAGAGCTATGGTTGCTGAGATGGTGGCTAAGCTTACCAGTGTGTGTTGGGACAAGTGTATCACTGGTACGCCTGGGAGTAAGTTCAGCTCTAGTGAATCCAACTGTCTATCAAACTGTGCCCAGCGCTATATGGATATGAGCATCATCATTATGAAACGATTCCAAAACAGTTGATGGATCTCCATGGGAGGGAGATTTTCCAGTTACAAGACAATATATATTTTCTTGGATCTATTGTTCAATTCAAACCGAAAGAAAAAGGGTCTGAACTTGTGGAAGTATTCTTCATTTTTTAGAGTTGATGCATTGCCCAAATCAGATTATTTTACATCTCGTTGAGAAAATTACTGAATTGAAATGGGGTAGCCCGTTGTAGTTTTTGTTATATGTAGTGTTGAGTTTTGGAATGTGCCTTGGATGTCAACTAGCTGCTTATTTGAAATTCCAGGAGGAAGGGCCCAATGTGGATGAATCGCAAGGGTAGGCATTCCATGCAATTGGTTGGAAGTAGCTAACATTGAATAATTTTTCCTTTTTCAAGTTCTTAATTGATGACATGTCATAGTTGCACAATGTGAATCATTTTAACACCTAGATTATGCTTTCAGCCTAAAAAAGCTCTATCCTCTTTAACTTTCAACCATCTTTATCTCTCTAAAGGTTATAGTTTGAGACCAATAAAAGTAAAGAGCTGTGAATATTGAAAGAACTTCCGTCGGTAGAGCATGGTTTGATTCATGCTCGTTTTTATGCAAGTTCTATTACAGTGGAG

Coding sequence (CDS)

ATGGATTCCTCGTCTCTTAACTCCCCGGAGCTGATGAATTTTATCAATGAAGAGAAGCAAAGAGCTATGGTTGCTGAGATGGTGGCTAAGCTTACCAGTGTGTGTTGGGACAAGTGTATCACTGGTACGCCTGGGAGTAAGTTCAGCTCTAGTGAATCCAACTGTCTATCAAACTGTGCCCAGCGCTATATGGATATGAGCATCATCATTATGAAACGATTCCAAAACAGTTGA

Protein sequence

MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQNS

Homology

[Close]

BLAST of Tan0006294 vs. ExPASy Swiss-Prot
Match: Q9XGY4 (Mitochondrial import inner membrane translocase subunit TIM8 OS=Arabidopsis thaliana OX=3702 GN=TIM8 PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 3.1e-26
Identity = 55/76 (72.37%), Postives = 67/76 (88.16%), Query Frame = 0


Query: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA 60
          MD S  N+PEL+ F+ +EK+RAMV EMV+K+TSVCWDKCIT  PGSKFSSSES+CL++CA
Sbjct: 1  MDPSMANNPELLQFLAQEKERAMVNEMVSKMTSVCWDKCITSAPGSKFSSSESSCLTHCA 60

Query: 61 QRYMDMSIIIMKRFQN 77
          QRYMDMS+IIMKRF +
Sbjct: 61 QRYMDMSMIIMKRFNS 76

[Close]

BLAST of Tan0006294 vs. ExPASy Swiss-Prot
Match: P0CR95 (Mitochondrial import inner membrane translocase subunit TIM8 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=TIM8 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 3.1e-10
Identity = 27/66 (40.91%), Postives = 45/66 (68.18%), Query Frame = 0


Query: 10 ELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCAQRYMDMSII 69
          EL +F+ +E+ +A +   + +LT+ CW+ CITG   SKFS SE+ CL NC  R++D S+ 
Sbjct: 17 ELESFLEQEQAKAKLQASIHELTNTCWNTCITGGISSKFSKSEAQCLENCVDRFLDSSLY 76

Query: 70 IMKRFQ 76
          I+++ +
Sbjct: 77 IVRQIE 82

[Close]

BLAST of Tan0006294 vs. ExPASy Swiss-Prot
Match: P0CR94 (Mitochondrial import inner membrane translocase subunit TIM8 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=TIM8 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 3.1e-10
Identity = 27/66 (40.91%), Postives = 45/66 (68.18%), Query Frame = 0


Query: 10 ELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCAQRYMDMSII 69
          EL +F+ +E+ +A +   + +LT+ CW+ CITG   SKFS SE+ CL NC  R++D S+ 
Sbjct: 17 ELESFLEQEQAKAKLQASIHELTNTCWNTCITGGISSKFSKSEAQCLENCVDRFLDSSLY 76

Query: 70 IMKRFQ 76
          I+++ +
Sbjct: 77 IVRQIE 82

[Close]

BLAST of Tan0006294 vs. ExPASy Swiss-Prot
Match: Q9Y1A3 (Mitochondrial import inner membrane translocase subunit Tim8 OS=Drosophila melanogaster OX=7227 GN=Tim8 PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 2.0e-09
Identity = 29/73 (39.73%), Postives = 44/73 (60.27%), Query Frame = 0


Query: 2  DSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCAQ 61
          ++ S N  EL  F+  EKQ+A V   + +   +CW+KCI G P +K   +   CLSNC  
Sbjct: 5  ENLSGNDKELQEFLLIEKQKAQVNAQIHEFNEICWEKCI-GKPSTKLDHATETCLSNCVD 64

Query: 62 RYMDMSIIIMKRF 75
          R++D S++I +RF
Sbjct: 65 RFIDTSLLITQRF 76

[Close]

BLAST of Tan0006294 vs. ExPASy Swiss-Prot
Match: Q09783 (Mitochondrial import inner membrane translocase subunit tim8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tim8 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 4.4e-09
Identity = 29/73 (39.73%), Postives = 42/73 (57.53%), Query Frame = 0


Query: 2  DSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCAQ 61
          D S     EL  FI  E+Q+  + + + + TS CW KCI G  G+K   SE  CL NC +
Sbjct: 11 DLSESEQLELSKFIESEQQKVKLQQAIHQFTSTCWPKCI-GNIGNKLDKSEEQCLQNCVE 70

Query: 62 RYMDMSIIIMKRF 75
          R++D +  I+KR+
Sbjct: 71 RFLDCNFHIIKRY 82

[Close]

BLAST of Tan0006294 vs. NCBI nr
Match: XP_008464391.1 (PREDICTED: mitochondrial import inner membrane translocase subunit TIM8 [Cucumis melo] >XP_011649996.1 mitochondrial import inner membrane translocase subunit TIM8 [Cucumis sativus] >XP_022921432.1 mitochondrial import inner membrane translocase subunit TIM8 [Cucurbita moschata] >XP_022924732.1 mitochondrial import inner membrane translocase subunit TIM8-like [Cucurbita moschata] >XP_022974369.1 mitochondrial import inner membrane translocase subunit TIM8-like [Cucurbita maxima] >XP_022988609.1 mitochondrial import inner membrane translocase subunit TIM8 [Cucurbita maxima] >XP_023516926.1 mitochondrial import inner membrane translocase subunit TIM8 [Cucurbita pepo subsp. pepo] >XP_023529319.1 mitochondrial import inner membrane translocase subunit TIM8-like [Cucurbita pepo subsp. pepo] >XP_038878330.1 mitochondrial import inner membrane translocase subunit TIM8 [Benincasa hispida] >KGN63456.1 hypothetical protein Csa_014027 [Cucumis sativus])

HSP 1 Score: 155.2 bits (391), Expect = 2.2e-34
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA 60
          MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA
Sbjct: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA 60

Query: 61 QRYMDMSIIIMKRFQNS 78
          QRYMDMSIIIMKRFQNS
Sbjct: 61 QRYMDMSIIIMKRFQNS 77

[Close]

BLAST of Tan0006294 vs. NCBI nr
Match: XP_022135207.1 (mitochondrial import inner membrane translocase subunit TIM8 [Momordica charantia])

HSP 1 Score: 153.7 bits (387), Expect = 6.5e-34
Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA 60
          MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITG+PGSKFSSSESNCLSNCA
Sbjct: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGSPGSKFSSSESNCLSNCA 60

Query: 61 QRYMDMSIIIMKRFQNS 78
          QRYMDMSIIIMKRFQNS
Sbjct: 61 QRYMDMSIIIMKRFQNS 77

[Close]

BLAST of Tan0006294 vs. NCBI nr
Match: KAG7023044.1 (Mitochondrial import inner membrane translocase subunit TIM8, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 150.6 bits (379), Expect = 5.5e-33
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 0


Query: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA 60
          MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCW KC+TGTPGSKFSSSESNCLSNCA
Sbjct: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWTKCVTGTPGSKFSSSESNCLSNCA 60

Query: 61 QRYMDMSIIIMKRFQN 77
          QRYMDMSIIIMKRFQN
Sbjct: 61 QRYMDMSIIIMKRFQN 76

[Close]

BLAST of Tan0006294 vs. NCBI nr
Match: XP_022872200.1 (mitochondrial import inner membrane translocase subunit TIM8-like [Olea europaea var. sylvestris] >CAA2939143.1 mitochondrial import inner membrane translocase subunit TIM8 [Olea europaea subsp. europaea])

HSP 1 Score: 136.3 bits (342), Expect = 1.1e-28
Identity = 64/76 (84.21%), Postives = 73/76 (96.05%), Query Frame = 0


Query: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA 60
          MDSSSLNSPEL  FI++EK++AMV EM+AKLT+VCWDKCITGTPGSKFSSSES+CL+NCA
Sbjct: 1  MDSSSLNSPELQQFISQEKEKAMVNEMIAKLTTVCWDKCITGTPGSKFSSSESSCLTNCA 60

Query: 61 QRYMDMSIIIMKRFQN 77
          QRYMDMS+IIMKRFQN
Sbjct: 61 QRYMDMSLIIMKRFQN 76

[Close]

BLAST of Tan0006294 vs. NCBI nr
Match: XP_011073110.1 (mitochondrial import inner membrane translocase subunit TIM8 [Sesamum indicum])

HSP 1 Score: 134.0 bits (336), Expect = 5.4e-28
Identity = 62/75 (82.67%), Postives = 69/75 (92.00%), Query Frame = 0


Query: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA 60
          MD SSLNSPEL  F+N+EK++AMV EM+ KLTS CWDKCITGTPGSKFSSSESNCL+NCA
Sbjct: 1  MDPSSLNSPELQQFLNQEKEKAMVTEMIGKLTSACWDKCITGTPGSKFSSSESNCLTNCA 60

Query: 61 QRYMDMSIIIMKRFQ 76
          QRYMDMS+IIMKRFQ
Sbjct: 61 QRYMDMSLIIMKRFQ 75

[Close]

BLAST of Tan0006294 vs. ExPASy TrEMBL
Match: A0A6J1IHF0 (Mitochondrial import inner membrane translocase subunit OS=Cucurbita maxima OX=3661 GN=LOC111472993 PE=3 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.1e-34
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA 60
          MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA
Sbjct: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA 60

Query: 61 QRYMDMSIIIMKRFQNS 78
          QRYMDMSIIIMKRFQNS
Sbjct: 61 QRYMDMSIIIMKRFQNS 77

[Close]

BLAST of Tan0006294 vs. ExPASy TrEMBL
Match: A0A6J1E0G1 (Mitochondrial import inner membrane translocase subunit OS=Cucurbita moschata OX=3662 GN=LOC111429714 PE=3 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.1e-34
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA 60
          MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA
Sbjct: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA 60

Query: 61 QRYMDMSIIIMKRFQNS 78
          QRYMDMSIIIMKRFQNS
Sbjct: 61 QRYMDMSIIIMKRFQNS 77

[Close]

BLAST of Tan0006294 vs. ExPASy TrEMBL
Match: A0A0A0LTY7 (Mitochondrial import inner membrane translocase subunit OS=Cucumis sativus OX=3659 GN=Csa_1G001280 PE=3 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.1e-34
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA 60
          MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA
Sbjct: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA 60

Query: 61 QRYMDMSIIIMKRFQNS 78
          QRYMDMSIIIMKRFQNS
Sbjct: 61 QRYMDMSIIIMKRFQNS 77

[Close]

BLAST of Tan0006294 vs. ExPASy TrEMBL
Match: A0A1S3CLD0 (Mitochondrial import inner membrane translocase subunit OS=Cucumis melo OX=3656 GN=LOC103502294 PE=3 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.1e-34
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA 60
          MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA
Sbjct: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA 60

Query: 61 QRYMDMSIIIMKRFQNS 78
          QRYMDMSIIIMKRFQNS
Sbjct: 61 QRYMDMSIIIMKRFQNS 77

[Close]

BLAST of Tan0006294 vs. ExPASy TrEMBL
Match: A0A6J1C212 (Mitochondrial import inner membrane translocase subunit OS=Momordica charantia OX=3673 GN=LOC111007226 PE=3 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 3.2e-34
Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA 60
          MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITG+PGSKFSSSESNCLSNCA
Sbjct: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGSPGSKFSSSESNCLSNCA 60

Query: 61 QRYMDMSIIIMKRFQNS 78
          QRYMDMSIIIMKRFQNS
Sbjct: 61 QRYMDMSIIIMKRFQNS 77

[Close]

BLAST of Tan0006294 vs. TAIR 10
Match: AT5G50810.1 (translocase inner membrane subunit 8 )

HSP 1 Score: 118.6 bits (296), Expect = 2.2e-27
Identity = 55/76 (72.37%), Postives = 67/76 (88.16%), Query Frame = 0


Query: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA 60
          MD S  N+PEL+ F+ +EK+RAMV EMV+K+TSVCWDKCIT  PGSKFSSSES+CL++CA
Sbjct: 1  MDPSMANNPELLQFLAQEKERAMVNEMVSKMTSVCWDKCITSAPGSKFSSSESSCLTHCA 60

Query: 61 QRYMDMSIIIMKRFQN 77
          QRYMDMS+IIMKRF +
Sbjct: 61 QRYMDMSMIIMKRFNS 76

[Close]

BLAST of Tan0006294 vs. TAIR 10
Match: AT1G61570.1 (translocase of the inner mitochondrial membrane 13 )

HSP 1 Score: 53.9 bits (128), Expect = 6.6e-08
Identity = 28/71 (39.44%), Postives = 43/71 (60.56%), Query Frame = 0


Query: 3  SSSLNSPE-LMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCAQ 62
          S S  SPE +M  +  +  +A   E++  L + C+DKC+T  PGS    SES+C+S C +
Sbjct: 12 SGSSVSPEVMMESVKTQLAQAYAEELIETLRTKCFDKCVT-KPGSSLGGSESSCISRCVE 71

Query: 63 RYMDMSIIIMK 73
          RYM+ + II +
Sbjct: 72 RYMEATAIISR 81

The following BLAST results are available for this feature:

BLAST of Tan0006294 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XGY4	3.1e-26	72.37	Mitochondrial import inner membrane translocase subunit TIM8 OS=Arabidopsis thal...	[more]
P0CR95	3.1e-10	40.91	Mitochondrial import inner membrane translocase subunit TIM8 OS=Cryptococcus neo...	[more]
P0CR94	3.1e-10	40.91	Mitochondrial import inner membrane translocase subunit TIM8 OS=Cryptococcus neo...	[more]
Q9Y1A3	2.0e-09	39.73	Mitochondrial import inner membrane translocase subunit Tim8 OS=Drosophila melan...	[more]
Q09783	4.4e-09	39.73	Mitochondrial import inner membrane translocase subunit tim8 OS=Schizosaccharomy...	[more]

BLAST of Tan0006294 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464391.1	2.2e-34	100.00	PREDICTED: mitochondrial import inner membrane translocase subunit TIM8 [Cucumis...	[more]
XP_022135207.1	6.5e-34	98.70	mitochondrial import inner membrane translocase subunit TIM8 [Momordica charanti...	[more]
KAG7023044.1	5.5e-33	97.37	Mitochondrial import inner membrane translocase subunit TIM8, partial [Cucurbita...	[more]
XP_022872200.1	1.1e-28	84.21	mitochondrial import inner membrane translocase subunit TIM8-like [Olea europaea...	[more]
XP_011073110.1	5.4e-28	82.67	mitochondrial import inner membrane translocase subunit TIM8 [Sesamum indicum]	[more]

BLAST of Tan0006294 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IHF0	1.1e-34	100.00	Mitochondrial import inner membrane translocase subunit OS=Cucurbita maxima OX=3...	[more]
A0A6J1E0G1	1.1e-34	100.00	Mitochondrial import inner membrane translocase subunit OS=Cucurbita moschata OX...	[more]
A0A0A0LTY7	1.1e-34	100.00	Mitochondrial import inner membrane translocase subunit OS=Cucumis sativus OX=36...	[more]
A0A1S3CLD0	1.1e-34	100.00	Mitochondrial import inner membrane translocase subunit OS=Cucumis melo OX=3656 ...	[more]
A0A6J1C212	3.2e-34	98.70	Mitochondrial import inner membrane translocase subunit OS=Momordica charantia O...	[more]

BLAST of Tan0006294 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50810.1	2.2e-27	72.37	translocase inner membrane subunit 8	[more]
AT1G61570.1	6.6e-08	39.44	translocase of the inner mitochondrial membrane 13	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035427	Tim10-like domain superfamily	GENE3D	1.10.287.810	Mitochondrial import inner membrane translocase subunit tim13 like domains	coord: 2..77 e-value: 5.0E-24 score: 85.8
IPR035427	Tim10-like domain superfamily	SUPERFAMILY	144122	Tim10-like	coord: 20..76
IPR004217	Tim10-like	PFAM	PF02953	zf-Tim10_DDP	coord: 13..76 e-value: 2.4E-25 score: 87.9
None	No IPR available	PANTHER	PTHR19338:SF15	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM8-LIKE	coord: 1..76
IPR039238	Mitochondrial import inner membrane translocase subunit Tim8/13	PANTHER	PTHR19338	TRANSLOCASE OF INNER MITOCHONDRIAL MEMBRANE 13 HOMOLOG	coord: 1..76

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0006294.1	Tan0006294.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0005758	mitochondrial intermembrane space
molecular_function	GO:0046872	metal ion binding