Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCCGGTTAGATTTCCGGCCAAAATCCTGGCTCTGGTCGTCGTTTTCCACCTCAAGTCCGCCATCTCTGCCGCCGACGACGCCACCATGCCCACACCCATCTCCTGCGCCAACTGCACCATTTGTCAATCCGCCTGCCGCCCTCCGCCGGCCTCAACTTCTCCGACGTATGAGGCACTGCCACCACCGCCGCCGATTGCAGAGCCAGAGCCATTGCCAGTGCCGGTTGCTCCGGCGAACTGCCCTCCCACTATTGTCCAGTGCTGCCAGTTTCTGCCGCCACCACCGCCGCGGCCGAATGGTAATATATACACGCCGTTTTATAATGAGTCGTCGTCTTCATTTTTGAAAGGTGGGTTGGTCTCTGTTTTGGCCCCTGTTTTTGGGTTGGCCGCCATTTTCTGA
mRNA sequence
ATGTCTCCGGTTAGATTTCCGGCCAAAATCCTGGCTCTGGTCGTCGTTTTCCACCTCAAGTCCGCCATCTCTGCCGCCGACGACGCCACCATGCCCACACCCATCTCCTGCGCCAACTGCACCATTTGTCAATCCGCCTGCCGCCCTCCGCCGGCCTCAACTTCTCCGACGTATGAGGCACTGCCACCACCGCCGCCGATTGCAGAGCCAGAGCCATTGCCAGTGCCGGTTGCTCCGGCGAACTGCCCTCCCACTATTGTCCAGTGCTGCCAGTTTCTGCCGCCACCACCGCCGCGGCCGAATGGTAATATATACACGCCGTTTTATAATGAGTCGTCGTCTTCATTTTTGAAAGGTGGGTTGGTCTCTGTTTTGGCCCCTGTTTTTGGGTTGGCCGCCATTTTCTGA
Coding sequence (CDS)
ATGTCTCCGGTTAGATTTCCGGCCAAAATCCTGGCTCTGGTCGTCGTTTTCCACCTCAAGTCCGCCATCTCTGCCGCCGACGACGCCACCATGCCCACACCCATCTCCTGCGCCAACTGCACCATTTGTCAATCCGCCTGCCGCCCTCCGCCGGCCTCAACTTCTCCGACGTATGAGGCACTGCCACCACCGCCGCCGATTGCAGAGCCAGAGCCATTGCCAGTGCCGGTTGCTCCGGCGAACTGCCCTCCCACTATTGTCCAGTGCTGCCAGTTTCTGCCGCCACCACCGCCGCGGCCGAATGGTAATATATACACGCCGTTTTATAATGAGTCGTCGTCTTCATTTTTGAAAGGTGGGTTGGTCTCTGTTTTGGCCCCTGTTTTTGGGTTGGCCGCCATTTTCTGA
Protein sequence
MSPVRFPAKILALVVVFHLKSAISAADDATMPTPISCANCTICQSACRPPPASTSPTYEALPPPPPIAEPEPLPVPVAPANCPPTIVQCCQFLPPPPPRPNGNIYTPFYNESSSSFLKGGLVSVLAPVFGLAAIF
Homology
BLAST of Tan0006268 vs. NCBI nr
Match:
KAG7037325.1 (hypothetical protein SDJN02_00950, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 192.6 bits (488), Expect = 2.2e-45
Identity = 106/132 (80.30%), Postives = 112/132 (84.85%), Query Frame = 0
Query: 7 PAKILALVVVFHLKSAISAADDATMPTPISCANCTICQSACRPPPASTSPTYEALPPPPP 66
PAK LALV+VFHLKSAI+AADDA+MPTP SC NC +CQSACRPPP P PPPPP
Sbjct: 3 PAKFLALVIVFHLKSAITAADDASMPTPTSCENCALCQSACRPPP-DAQPLLPP-PPPPP 62
Query: 67 IAEPEPLPVPVAPANCPPTIVQCCQFLPP--PPPRPNG-NIYTPFYNESSSSFLKGGLVS 126
IAEPEPLPVPV PANCPPTIVQCCQF+PP PPP PNG NIYTPFYNES SSFLK GLVS
Sbjct: 63 IAEPEPLPVPVPPANCPPTIVQCCQFMPPPAPPPPPNGNNIYTPFYNESCSSFLKRGLVS 122
Query: 127 VLAPVFGLAAIF 136
VLAPVFG+AAIF
Sbjct: 123 VLAPVFGVAAIF 132
BLAST of Tan0006268 vs. NCBI nr
Match:
KAG6607747.1 (hypothetical protein SDJN03_01089, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 191.0 bits (484), Expect = 6.5e-45
Identity = 105/132 (79.55%), Postives = 111/132 (84.09%), Query Frame = 0
Query: 7 PAKILALVVVFHLKSAISAADDATMPTPISCANCTICQSACRPPPASTSPTYEALPPPPP 66
PAK LALV+VFHLKSAI+AADDA+MPTP SC NC +CQSACRPPP P PPPPP
Sbjct: 3 PAKFLALVIVFHLKSAITAADDASMPTPTSCENCALCQSACRPPP-DAQPLLPP-PPPPP 62
Query: 67 IAEPEPLPVPVAPANCPPTIVQCCQFLPP--PPPRPNG-NIYTPFYNESSSSFLKGGLVS 126
IAEPEPLPVPV P NCPPTIVQCCQF+PP PPP PNG NIYTPFYNES SSFLK GLVS
Sbjct: 63 IAEPEPLPVPVPPGNCPPTIVQCCQFMPPPAPPPPPNGNNIYTPFYNESCSSFLKRGLVS 122
Query: 127 VLAPVFGLAAIF 136
VLAPVFG+AAIF
Sbjct: 123 VLAPVFGVAAIF 132
BLAST of Tan0006268 vs. NCBI nr
Match:
XP_008463043.1 (PREDICTED: sperm mitochondrial-associated cysteine-rich protein-like [Cucumis melo])
HSP 1 Score: 186.8 bits (473), Expect = 1.2e-43
Identity = 102/136 (75.00%), Postives = 108/136 (79.41%), Query Frame = 0
Query: 6 FPAKILALVVVFHLKSAISAADDATMPTPISCANCTICQSACRPPPASTSPTYEALPPPP 65
FPAK+LALVVVF+L SA+SA DDA M TPISC NCTICQS CRPP + P PPPP
Sbjct: 2 FPAKLLALVVVFNLNSAVSATDDAAMATPISCDNCTICQSTCRPPQSEPLPLLPPPPPPP 61
Query: 66 -PIAEPEPLPVPVAPANCPPTIVQCCQFLPPPPPRP-----NGNIYTPFYNESSSSFLKG 125
P AEPEPLP+PVAPANCPPTIVQCCQFLPPPPP P NGNIYTP YNESSSSFL+
Sbjct: 62 APYAEPEPLPIPVAPANCPPTIVQCCQFLPPPPPPPQATAGNGNIYTPIYNESSSSFLRV 121
Query: 126 GLVSVLAPVFGLAAIF 136
GL S LAPVFGL AIF
Sbjct: 122 GLGSALAPVFGLVAIF 137
BLAST of Tan0006268 vs. NCBI nr
Match:
KGN44024.1 (hypothetical protein Csa_011878 [Cucumis sativus])
HSP 1 Score: 181.0 bits (458), Expect = 6.7e-42
Identity = 99/135 (73.33%), Postives = 107/135 (79.26%), Query Frame = 0
Query: 6 FPAKILALVVVFHLKSAISAADDATMPTPISCANCTICQSACRPPPASTSPTYEALPPPP 65
FPAK+LALVVVF+L +A+SA DDA MPTPISC NCTICQS C PPP+ P + PPP
Sbjct: 45 FPAKLLALVVVFNLNTAVSATDDAAMPTPISCDNCTICQSTCSPPPSEPLPLPLSPPPPS 104
Query: 66 PIAEPEPLPVPVAPANCPPTIVQCCQFLPPPPPRP-----NGNIYTPFYNESSSSFLKGG 125
P AEPEPLP PVAPANCPPTIVQCCQFLPPPPP P NGN+YTP YN SSSSFL+ G
Sbjct: 105 PYAEPEPLPFPVAPANCPPTIVQCCQFLPPPPPPPQATAVNGNVYTPIYN-SSSSFLRVG 164
Query: 126 LVSVLAPVFGLAAIF 136
L S LAPVFGL AIF
Sbjct: 165 LGSALAPVFGLLAIF 178
BLAST of Tan0006268 vs. NCBI nr
Match:
XP_011659730.1 (leucine-rich repeat extensin-like protein 3 [Cucumis sativus])
HSP 1 Score: 181.0 bits (458), Expect = 6.7e-42
Identity = 99/135 (73.33%), Postives = 107/135 (79.26%), Query Frame = 0
Query: 6 FPAKILALVVVFHLKSAISAADDATMPTPISCANCTICQSACRPPPASTSPTYEALPPPP 65
FPAK+LALVVVF+L +A+SA DDA MPTPISC NCTICQS C PPP+ P + PPP
Sbjct: 2 FPAKLLALVVVFNLNTAVSATDDAAMPTPISCDNCTICQSTCSPPPSEPLPLPLSPPPPS 61
Query: 66 PIAEPEPLPVPVAPANCPPTIVQCCQFLPPPPPRP-----NGNIYTPFYNESSSSFLKGG 125
P AEPEPLP PVAPANCPPTIVQCCQFLPPPPP P NGN+YTP YN SSSSFL+ G
Sbjct: 62 PYAEPEPLPFPVAPANCPPTIVQCCQFLPPPPPPPQATAVNGNVYTPIYN-SSSSFLRVG 121
Query: 126 LVSVLAPVFGLAAIF 136
L S LAPVFGL AIF
Sbjct: 122 LGSALAPVFGLLAIF 135
BLAST of Tan0006268 vs. ExPASy TrEMBL
Match:
A0A1S3CI95 (sperm mitochondrial-associated cysteine-rich protein-like OS=Cucumis melo OX=3656 GN=LOC103501284 PE=4 SV=1)
HSP 1 Score: 186.8 bits (473), Expect = 5.9e-44
Identity = 102/136 (75.00%), Postives = 108/136 (79.41%), Query Frame = 0
Query: 6 FPAKILALVVVFHLKSAISAADDATMPTPISCANCTICQSACRPPPASTSPTYEALPPPP 65
FPAK+LALVVVF+L SA+SA DDA M TPISC NCTICQS CRPP + P PPPP
Sbjct: 2 FPAKLLALVVVFNLNSAVSATDDAAMATPISCDNCTICQSTCRPPQSEPLPLLPPPPPPP 61
Query: 66 -PIAEPEPLPVPVAPANCPPTIVQCCQFLPPPPPRP-----NGNIYTPFYNESSSSFLKG 125
P AEPEPLP+PVAPANCPPTIVQCCQFLPPPPP P NGNIYTP YNESSSSFL+
Sbjct: 62 APYAEPEPLPIPVAPANCPPTIVQCCQFLPPPPPPPQATAGNGNIYTPIYNESSSSFLRV 121
Query: 126 GLVSVLAPVFGLAAIF 136
GL S LAPVFGL AIF
Sbjct: 122 GLGSALAPVFGLVAIF 137
BLAST of Tan0006268 vs. ExPASy TrEMBL
Match:
A0A0A0K536 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G111300 PE=4 SV=1)
HSP 1 Score: 181.0 bits (458), Expect = 3.2e-42
Identity = 99/135 (73.33%), Postives = 107/135 (79.26%), Query Frame = 0
Query: 6 FPAKILALVVVFHLKSAISAADDATMPTPISCANCTICQSACRPPPASTSPTYEALPPPP 65
FPAK+LALVVVF+L +A+SA DDA MPTPISC NCTICQS C PPP+ P + PPP
Sbjct: 45 FPAKLLALVVVFNLNTAVSATDDAAMPTPISCDNCTICQSTCSPPPSEPLPLPLSPPPPS 104
Query: 66 PIAEPEPLPVPVAPANCPPTIVQCCQFLPPPPPRP-----NGNIYTPFYNESSSSFLKGG 125
P AEPEPLP PVAPANCPPTIVQCCQFLPPPPP P NGN+YTP YN SSSSFL+ G
Sbjct: 105 PYAEPEPLPFPVAPANCPPTIVQCCQFLPPPPPPPQATAVNGNVYTPIYN-SSSSFLRVG 164
Query: 126 LVSVLAPVFGLAAIF 136
L S LAPVFGL AIF
Sbjct: 165 LGSALAPVFGLLAIF 178
BLAST of Tan0006268 vs. ExPASy TrEMBL
Match:
W9QFT0 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_018218 PE=4 SV=1)
HSP 1 Score: 69.7 bits (169), Expect = 1.1e-08
Identity = 55/138 (39.86%), Postives = 73/138 (52.90%), Query Frame = 0
Query: 8 AKILALVVV----FHLKSAISAADDATMPTPISCANCTICQSACRPPPASTSPTYEALPP 67
AK++ ++ V F L A + DA +P+P C NCT+CQ C PPAS +P+Y A PP
Sbjct: 4 AKLVFIIAVCLSAFSLCCAWENSGDA-LPSPTPCFNCTMCQYPCLSPPASGNPSYGAPPP 63
Query: 68 PPP----IAEPEPLPVPVAP--ANCPPTIVQCCQFLPPPPPRPNGNIYTPFYNESSSSFL 127
PPP + PLP P P CPPT +QCCQ+ PPPP +Y P YN + L
Sbjct: 64 PPPELPGLPADIPLPPPQQPWQGKCPPTPIQCCQYTPPPP----YGVYVP-YNHALPCSL 123
Query: 128 KGGLVSVLAPVFGLAAIF 136
L ++ +F A F
Sbjct: 124 PIFLYVIMMLLFSSAVTF 135
BLAST of Tan0006268 vs. ExPASy TrEMBL
Match:
A0A443NET1 (Nitrile-specifier protein 5 OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_00547500 PE=4 SV=1)
HSP 1 Score: 65.1 bits (157), Expect = 2.6e-07
Identity = 41/92 (44.57%), Postives = 54/92 (58.70%), Query Frame = 0
Query: 28 DATMPTPISCANCTICQSACRPPPASTSPTYEALPPPPPIAEPEPLPVPVAPANCPPT-I 87
D +P+P++C NC++CQ C P P +T P Y+ PPP P P P P+NCPP+
Sbjct: 34 DDNIPSPVACFNCSLCQYPCNPSPPAT-PAYQPFAPPPS-PPPPPSPSMPVPSNCPPSPP 93
Query: 88 VQCCQFLPPPPPRPNGNIYTPFYNESSSSFLK 119
QCCQ PP PP P NI P+YN +S L+
Sbjct: 94 SQCCQVPPPGPPHPPPNI--PYYNYGTSPPLR 121
BLAST of Tan0006268 vs. ExPASy TrEMBL
Match:
A0A6A1VX00 (4Fe-4S ferredoxin-type domain-containing protein OS=Morella rubra OX=262757 GN=CJ030_MR4G016275 PE=4 SV=1)
HSP 1 Score: 59.7 bits (143), Expect = 1.1e-05
Identity = 51/137 (37.23%), Postives = 64/137 (46.72%), Query Frame = 0
Query: 21 SAISAADDATMPTPISCANCTICQSACR-------------------PPPASTS--PTYE 80
SA A +P+P +C NCT+CQ C PPP S + P YE
Sbjct: 22 SATGEASGDVLPSPSACTNCTLCQYPCHTPAPPLPDYPLYGTPPLPPPPPPSLAEYPPYE 81
Query: 81 -ALPPPPPIAEPEPLPVPVAPANCPP-TIVQCCQFLPPPPPRPNGNIYTPFYNESSSSFL 135
+ PPPPP P LP A NCPP T+VQCCQ+ PPP G Y P+ N S+S
Sbjct: 82 TSSPPPPPPPPPSQLP---AQGNCPPTTVVQCCQY---PPPIAYG--YVPYNNYSASCPS 141
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG7037325.1 | 2.2e-45 | 80.30 | hypothetical protein SDJN02_00950, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KAG6607747.1 | 6.5e-45 | 79.55 | hypothetical protein SDJN03_01089, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_008463043.1 | 1.2e-43 | 75.00 | PREDICTED: sperm mitochondrial-associated cysteine-rich protein-like [Cucumis me... | [more] |
KGN44024.1 | 6.7e-42 | 73.33 | hypothetical protein Csa_011878 [Cucumis sativus] | [more] |
XP_011659730.1 | 6.7e-42 | 73.33 | leucine-rich repeat extensin-like protein 3 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3CI95 | 5.9e-44 | 75.00 | sperm mitochondrial-associated cysteine-rich protein-like OS=Cucumis melo OX=365... | [more] |
A0A0A0K536 | 3.2e-42 | 73.33 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G111300 PE=4 SV=1 | [more] |
W9QFT0 | 1.1e-08 | 39.86 | Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_018218 PE=4 SV=1 | [more] |
A0A443NET1 | 2.6e-07 | 44.57 | Nitrile-specifier protein 5 OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=C... | [more] |
A0A6A1VX00 | 1.1e-05 | 37.23 | 4Fe-4S ferredoxin-type domain-containing protein OS=Morella rubra OX=262757 GN=C... | [more] |
Match Name | E-value | Identity | Description | |