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Tan0006258 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGAAACCCATCATCTATGGAGACAAATCCTCAACTACTCGAACACCTTCAAAACGACACCGTCATGGGAAGAGAAGGCCTTCGCCGAGGACACCGCCGCCGCCGTCTGGCCGCCGAGATCCTACTCCTGCAACTTCTGTATGAGACAATTCCGGTCAGCTCAGGCCCTCGGCGGCCACATGAACGTCCATCGTAGAGACCGTGCTCGACTCCAAAACAATCCCAACCGTCCATTTTTCATCAAACCAACTCCCACCCTTGATCTTCAAACTCACCATTTTTCTCCCAAAAACAACAGATCAGATTCTGCTGGGCTCTGTGTCAAAAGAGCCAAAGTTTGTGTTTCTGAAGAGCAGCTTGACCTTGACCTTGACCTTGAGCTCAAGCTATAG ATGGCAGAAACCCATCATCTATGGAGACAAATCCTCAACTACTCGAACACCTTCAAAACGACACCGTCATGGGAAGAGAAGGCCTTCGCCGAGGACACCGCCGCCGCCGTCTGGCCGCCGAGATCCTACTCCTGCAACTTCTGTATGAGACAATTCCGGTCAGCTCAGGCCCTCGGCGGCCACATGAACGTCCATCGTAGAGACCGTGCTCGACTCCAAAACAATCCCAACCGTCCATTTTTCATCAAACCAACTCCCACCCTTGATCTTCAAACTCACCATTTTTCTCCCAAAAACAACAGATCAGATTCTGCTGGGCTCTGTGTCAAAAGAGCCAAAGTTTGTGTTTCTGAAGAGCAGCTTGACCTTGACCTTGACCTTGAGCTCAAGCTATAG ATGGCAGAAACCCATCATCTATGGAGACAAATCCTCAACTACTCGAACACCTTCAAAACGACACCGTCATGGGAAGAGAAGGCCTTCGCCGAGGACACCGCCGCCGCCGTCTGGCCGCCGAGATCCTACTCCTGCAACTTCTGTATGAGACAATTCCGGTCAGCTCAGGCCCTCGGCGGCCACATGAACGTCCATCGTAGAGACCGTGCTCGACTCCAAAACAATCCCAACCGTCCATTTTTCATCAAACCAACTCCCACCCTTGATCTTCAAACTCACCATTTTTCTCCCAAAAACAACAGATCAGATTCTGCTGGGCTCTGTGTCAAAAGAGCCAAAGTTTGTGTTTCTGAAGAGCAGCTTGACCTTGACCTTGACCTTGAGCTCAAGCTATAG MAETHHLWRQILNYSNTFKTTPSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRPFFIKPTPTLDLQTHHFSPKNNRSDSAGLCVKRAKVCVSEEQLDLDLDLELKL Homology
BLAST of Tan0006258 vs. ExPASy Swiss-Prot
Match: O80942 (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.1e-18 Identity = 44/72 (61.11%), Postives = 57/72 (79.17%), Query Frame = 0
BLAST of Tan0006258 vs. ExPASy Swiss-Prot
Match: Q9LHS9 (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 GN=RBE PE=2 SV=2) HSP 1 Score: 77.8 bits (190), Expect = 1.0e-13 Identity = 38/63 (60.32%), Postives = 44/63 (69.84%), Query Frame = 0
BLAST of Tan0006258 vs. ExPASy Swiss-Prot
Match: Q38895 (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 2.3e-13 Identity = 39/73 (53.42%), Postives = 47/73 (64.38%), Query Frame = 0
BLAST of Tan0006258 vs. ExPASy Swiss-Prot
Match: Q9SLB8 (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.5e-12 Identity = 34/63 (53.97%), Postives = 44/63 (69.84%), Query Frame = 0
BLAST of Tan0006258 vs. ExPASy Swiss-Prot
Match: Q9SR34 (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 8.3e-08 Identity = 24/33 (72.73%), Postives = 30/33 (90.91%), Query Frame = 0
BLAST of Tan0006258 vs. NCBI nr
Match: XP_023542190.1 (zinc finger protein 10-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 241.9 bits (616), Expect = 3.1e-60 Identity = 116/127 (91.34%), Postives = 119/127 (93.70%), Query Frame = 0
BLAST of Tan0006258 vs. NCBI nr
Match: XP_022988302.1 (zinc finger protein 10-like [Cucurbita maxima]) HSP 1 Score: 240.0 bits (611), Expect = 1.2e-59 Identity = 115/127 (90.55%), Postives = 119/127 (93.70%), Query Frame = 0
BLAST of Tan0006258 vs. NCBI nr
Match: KAG6600035.1 (Zinc finger protein 10, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030703.1 Zinc finger protein 10, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 235.3 bits (599), Expect = 2.9e-58 Identity = 113/127 (88.98%), Postives = 118/127 (92.91%), Query Frame = 0
BLAST of Tan0006258 vs. NCBI nr
Match: XP_008461701.1 (PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis melo] >KAA0050359.1 transcriptional regulator SUPERMAN-like [Cucumis melo var. makuwa] >TYK03572.1 transcriptional regulator SUPERMAN-like [Cucumis melo var. makuwa]) HSP 1 Score: 171.0 bits (432), Expect = 6.7e-39 Identity = 94/134 (70.15%), Postives = 100/134 (74.63%), Query Frame = 0
BLAST of Tan0006258 vs. NCBI nr
Match: XP_004151402.2 (zinc finger protein 11 [Cucumis sativus] >KGN50575.1 hypothetical protein Csa_021472 [Cucumis sativus]) HSP 1 Score: 169.9 bits (429), Expect = 1.5e-38 Identity = 94/140 (67.14%), Postives = 103/140 (73.57%), Query Frame = 0
BLAST of Tan0006258 vs. ExPASy TrEMBL
Match: A0A6J1JCP1 (zinc finger protein 10-like OS=Cucurbita maxima OX=3661 GN=LOC111485589 PE=4 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 5.7e-60 Identity = 115/127 (90.55%), Postives = 119/127 (93.70%), Query Frame = 0
BLAST of Tan0006258 vs. ExPASy TrEMBL
Match: A0A5A7UA35 (Transcriptional regulator SUPERMAN-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold293G00710 PE=4 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 3.3e-39 Identity = 94/134 (70.15%), Postives = 100/134 (74.63%), Query Frame = 0
BLAST of Tan0006258 vs. ExPASy TrEMBL
Match: A0A1S3CGM6 (transcriptional regulator SUPERMAN-like OS=Cucumis melo OX=3656 GN=LOC103500239 PE=4 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 3.3e-39 Identity = 94/134 (70.15%), Postives = 100/134 (74.63%), Query Frame = 0
BLAST of Tan0006258 vs. ExPASy TrEMBL
Match: A0A0A0KLQ3 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G183770 PE=4 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 7.3e-39 Identity = 94/140 (67.14%), Postives = 103/140 (73.57%), Query Frame = 0
BLAST of Tan0006258 vs. ExPASy TrEMBL
Match: A0A6J1CVW0 (transcriptional regulator SUPERMAN-like OS=Momordica charantia OX=3673 GN=LOC111015051 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 3.1e-21 Identity = 57/92 (61.96%), Postives = 68/92 (73.91%), Query Frame = 0
BLAST of Tan0006258 vs. TAIR 10
Match: AT2G37740.1 (zinc-finger protein 10 ) HSP 1 Score: 94.4 bits (233), Expect = 7.5e-20 Identity = 44/72 (61.11%), Postives = 57/72 (79.17%), Query Frame = 0
BLAST of Tan0006258 vs. TAIR 10
Match: AT4G17810.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 84.7 bits (208), Expect = 5.9e-17 Identity = 38/52 (73.08%), Postives = 42/52 (80.77%), Query Frame = 0
BLAST of Tan0006258 vs. TAIR 10
Match: AT5G06070.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 77.8 bits (190), Expect = 7.2e-15 Identity = 38/63 (60.32%), Postives = 44/63 (69.84%), Query Frame = 0
BLAST of Tan0006258 vs. TAIR 10
Match: AT3G23130.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 76.6 bits (187), Expect = 1.6e-14 Identity = 39/73 (53.42%), Postives = 47/73 (64.38%), Query Frame = 0
BLAST of Tan0006258 vs. TAIR 10
Match: AT2G42410.1 (zinc finger protein 11 ) HSP 1 Score: 73.9 bits (180), Expect = 1.0e-13 Identity = 34/63 (53.97%), Postives = 44/63 (69.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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