Tan0006213 (gene) Snake gourd v1

Overview


Name	Tan0006213
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Phytocyanin domain-containing protein
Location	LG07: 44194854 .. 44211358 (+)
RNA-Seq Expression	Tan0006213
Synteny	Tan0006213

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATGGGAATAGGAGGAAGTAGAATAAGAATGGTAGTATTAGTAGTGGCAATCGCTTGTGGAGGGTTGGTGGTAAGAGTTGCAAAGGGAGAGAAGCTTCATAAGGTGGGCAATTCACAAGGATGGAGCCCTAATCTAAACTACACCCCTTGGTCCAACACTCACCATTTCTATCTTGGTGATTGGCTTTGTAAGTTTCATCCATTTTTTCTTTTTTCTTTTTTTTTTTTTTTAGTTTTAGCGGGAAGATATAAAATACTTTTGGTTCTTAAGGTCCCGTTTGATAACGTTCTTATTTCTTGTTTCTTGTTTCTTATTTTATAAGATATGAAACAAGAATATGTTTGATAACTATTTATGTTTCTTATTTCTTTGAAAACTTTCTTGTTTCTTGTATATATAAATATACAATTAATTATAACAAATTTATATTATCAAATACGAATAAATTTTTGTTTCTTTGAAAACTAGAAATAAAAACATAAACTTGTTTGATAACACTTTCTTGTTTCTTGTATATATAAATATACAATTAATTATAACAAATTTATATCATCAAATACGAATAAATCTTGATGCAAAATTAACTAATAATAAAAGTAAATAAATAAAATTCTTTTATCCTTCACATGTTGTTCAAATTTGAGTTGAAAACATCCATTTGTACTCACTAGGGATTGAACTCAAACCCTGTGAAAGGAAGAAGAAAGGGACACAGACTCATTTTACCAACAAACTAAAAAGAGAATTTAGCAAAAACGGGAACATTTAATATTAAAACAAAACGAACAAAAAGAAACTTTGATTCTAAAATTTAGTCCAAATTTTAGAAATGTTTCTCAAATTTTAGAAAAAAAGAAATTGGATGGATTATCTAACAAGTCTGTTTTTTAGAAAATGAGAAACAGAAACAACAAACAGGAAACGAAAACGTTATCAAATGGTCCCTAAACTTTTATAAAAGTAACAATTTAGTCTCTCAAGTACTTTAGTTTACAACAATTTAGTGTTTGTATTTTAATAATTGTTACAATTTAAAGTCTCTAAATTTTAACATCTAACAATTTAGTAACTATACTTTGAATTTTGAAATTTGTACAAATTTAATTCTTACCATGAAAAATTACATCAAAATTTAGTGTCAATTTTTATTTTGTAATGACTTAATTTTGATAGTTTATGACCACATTTGGTTCTATAATCAACATATCAATCTATATAGGTAAGAAATTCTACTAAATCTTAATAATATTTTTCACCTTAAGAATTAAGTCGTTATAAATTTTAATATAGGGACTACATTTGTTAGGGCATTTTTTATTAATATTGTAATTTTTAAACTTATTATAAAAATGTTGTATTTTTCAAACTATTTATAAAAATATTGTATTTTTCAAACTATTTATAAAAATATTATATTTTTCAAACTATTTATAAAAATATTATATTTTTCAAACTATTTATAAATTTTAATATAGGGACTACATTTGTTAGGGCGTGGATATTGGTCGTCTCTTGAAGAGACGACCAAAATGCCATCTATCGCAAAATTTTAAAAAATTTGTGGATGGTCGTCTCTTAAATAGACAACCATCTCCAAAATTTAAACAATAATCGCTTATGGAATAGTGGTTTGTGGTAGGTTTTATAAATTTGTGTGTATGGTTTTGAGTCCAACCCAACGTAGATTTTTAACATTATATTATAATTTGTTATTTTTATTTATTTTTATTTATTTTATTTAAATCAAATAAGATATATTTTTTTAATATAGGTTATTTTATTTAAATCAAATAACTTATCTATTTATTTAAAAAAAAATAAAAGATGGCAATATAATATTCAATTTACTTAAAATCCTAAAATATAGTAAATAAGTAATAAATTATAATATACAATTCAATTTACTTAAAATGTTAAAAAATGGTAATGAAATAATAAACTACAATACAATCTATAGGTTAAAATATCATTTTTGGTCTCTGTACTTTGAGAATTGTTCCATTTTGGTTTCTATACTTTAAAATGTCCAATTTTAGTCAATGTAATTTTAATAAAGTTTAAAATGGGTCCCTATGATAAGTTTGAAGTTAATTTTTATCATAATTAGTTACAAAATAATAATAATTTTAATACAAAAAAAGGCACAATGTGAACATATTTTCAAAATTTGTAGGAAATTTCAAAATTTTAAAATTTGATCATCTCTTGTCTCCATCTTCCATGCACAATATTTATAAATTGAATAATTTATGTAATTTATTATATTTTAACTTTTTAAGTAAATTGAATATTATATTTATTATTTAAAAAAATGAAGAAAGGAAGAAAGAGAAAAAAATGTAAAAGAAAGAAAAGAAAGAAAAATAGAGAATACAGAAAAAATGGAGAAGAAGGAAATAAAGAGAAAAAATGAAAACAAGATGTTAAAAATCTACGTTGGGTTGGACTCAAAACCCTATACACAAATTTATAAAACCTACTGCAAACCACTATGCCATAAGTAATTATTGTTTAAATTTCGGAGATGATCGTCTCATCAAGAGACGACCATCCACAATTTTTTTTAAAATTTTGCGACAGATGGCATTTTTGTCGTCTCTTCAAGAGACGACCAACATCCACGCACAAGATGGTCGTCTCTTGAAGAGACGATCATCTCCAACTCATTAAAACAACAATATTTTTATAAATAGTTTGAAAAAAATAATATTTTTATAATAAGTTTAAAAAATTACAATATTAATAATAAATGCCCCATTTGTTATATATTAAAGTTTAGAGAATTTGTAATGGGTAGCAATTATGGTTTTAGTATTTGTAGATATAGCAACATTTTAAAAGAATTGCAAATATGACAAAAGTCTTTAATTTTTTTATATAATTCCAATTATACCCTTGGCTTAAACATATTCCCTTTTTAATTGGTATTTGTTTTTCAATTGGTATTTGTTCTTCACGGTTACTTAAATATTCCTTGTTATTTTTATATTTTTATATTCAAAACAAACATGATTATGCCCGACATTTATATTTTTTATTATTTTACAATTTTAAGCATTTAAACATTTCAGTTTTCTAGATTCTCAAACAGTAATACATATTTAACTACTTGTAAGGCTCTAAATTCACAGTCAAATCAAATGAGATGTATTATAATTTATTTAATATACCTATTTTTTAGAGAATTTGCAATGGGTAGTAATTATGGTTTTAGTATTTGTAGATATAGCAACTTTTTAAAAGAATTGCAAATATGGCAAAAATCTTTAATTTTTTTTATAATTCCAATTATACTCTTGGCTTAAACATATTCCCTTTTTAATTAGTATTTGTTTTTCAATTGGTATTTGTTCTTCACGGTATTTTTCTTCTTTCGATTTTTTTACGACAACATCTTCTTGATTCTAGTCCAATCTTCCCAAACTCTTCTCGATTCCAGTCCAATCTTCTGTCGAGTCGCAAGTTTGAGTATCTTCTCAAATTCAATCGGAGTCGCAAGCCTTCACCTATTCGATCGGGTATTTTCTAGTTTGATATGTTGAATTGCAACCCATGAATTTTCATCGAGTTTGTTTGATTATCTTCTCCAATTCGATCGAAGTCGCAAGTTTGTCTGATTATCTTCTCCAATTCGATCGCATTGTAGTATCTTCTTATTCTGGTCAAGTATCTTCCAATTCGATCTTTTCGAAGTCCAACGGAGCTTTTTTCGTGGGTATTTGATTTTTTCAATCAACATTTTTCGTGGGTATTTCTTATGTTCATTTTGTTACATCACTATTTTTCTGCTTTGGAGTCGCAAGTTTTCTTGATTTTTTGTTCTATCAGCAATACTGTTTTCTAGATGATCGACGATATACGTGACATCAGTGATATCTATCATTGTTTTCTAGATATGATCAATAGATATCAGTTATATCAGTGATATCAGTAATCAATAGATATCAATGATATTAGTGATATTAGTGATATACGAGTGACTATTGTGCTTCCAATTAGTGATATACAATCTTCTGTTGGAGCTCTTTTCGTGGGTATTTGAGTTTGTCAATCAACCAGATCTTTTTTCGTGGGTATTTTTTTGTTCATTTTGTTATATCACTGTTTTTCTGCAATGTTTTGGAGTCGCAAGTCTGATTTTGGTGATTGTTTTGTTTTCTAGATATGCTAGAGAATACATATGACATCAGTGATATCTATCATTGTTTTCTAGATACAATGATATCAGTGATATCAATGATCAATATATATGATATCAGTGATATCAATGATCGAAGAGATATAAATGATATCGTTGATACATCGTTTTTAGATATCAATGATATCGGTGATATCATTGATCAATAGATATGATATCGCTGATCGTAGATATCAATGATATCGATGATCAATAGATATCAATATTTATCGCTGATATCATTAATCAATGATATACGAGTGACTATTGTGGTGATCGATTTCTATATTACTTAATATTGTTAATGTTGTTATTACTTTTCGTGAGGAACTATGATAAAGCTTCCAATAGTTATTTTTATAGTAGGCAATGGAATGAGAAAAATTTCTATAAGAATTACAAGACCATTGGAATTTTTGTTGATGAGATGATGTGTTTTGATGATTTTATTTATCTGATTGTGAAAGAAGTTCGAATGGATAGTTCCATTTCTTTTATAGAATTGTCGATGTTATTAGGTTAGGGATAAATGATGATCAGGATGTGGTTAAAACTCAAGAAGATAAAAATGTTGTTTGGTTTTTAACTTTAGTGAAAGATCAAAATACAAGATATCTTTTAGTTTCTCATATTACAAGAAGTCTAATAGAAAAGTTATGAGTAATAGGTAATAGATAGGTAGAAGTTTATCAGACAACTATCATTGATAGAATCCTATGACTTCTATCAGTGATAGTAGTCTATCACTTCTTTTTCATTAACTTTTATCAATCATTAACAGGATAGTAGTCTATCACTTCTATCAGTGATAGACAGCGATAGAAGTCGAATAGGAACAAGATGTCTAATAGATAATAGAAAAGTTATGAGTAATAGGTAATAGATAGACAATTGTGGTAGAATTCTATCAGACAATTATCACTGATAGAAGTCTATTACTTCTATCAGTGATAGATATCACAATAGTAGTTTATCAAAATTAGAAGAAAAAATTAGTTATTAAATAAACAGACAAAAAAATTACTTATTAAATAAACAGACTTCTATCAGTGATATCACTGATAGAATCTCATCAGTGATATCACTGATAGCATCCCATCAGTGATATCACTGATGGCAGTGACTGGCGTGGGGTGTTTTAGTAATTTCAATTTTTCGTTTCAAATTTTTGCTATTTTTGCAAATAAATTGAGTCATTTGCTATATGGACAATTATATTGGTCCTTTTCGCTACCAACCCAATTGCCCCTAAAGTTTATGAAATAAATTTAGTATTATGAAGTAAATTGCTACTAAATTGAACGTACAGAGGCTAAGTCATTACAGAATAAATTCAATGATGAGGTTGTTACTTTCTTGAATGTTTTAGACAACAAAAGTGGTTTTTAACCCATTTGTAAAAATAGTAATAAACAATTCTATAATACAATTTACCAATAAATAAATAAAATTGTAAATAGAGAGGTTATTTCTTATGACAAAAATTAATTTTAGTTTTTTAGTTCAATAAATAAGGGATAGGAATTTGAATTGAGTATTGAAAGGTACACATGTGACTAAAAGATATAAATATATGAGAAAGAGCTAAAAAATGTATTTTAACACAGAGTAGGATATTATTGGAGGGATCAAAACTATAAGTTGTGGTAACAAAATTTAATAGTGTTTTTCTTACCATATATAAAGATTAGATTAGTTCTATTGAAAAACCGAACCAAACCAAACAGGTTCGATTCGATTTGGTTCGATTTCTTACACCCTGATTGAGATGTTGAAATCTGTTATCAAGTTTTGAAAATTGTGATATACAACTATCACTTTATCAGTATTATTATTTTTACTATTATTATGTTTTTTTTTTCCAAATTACCTTTAATCTCATAATCCATATCTTTATATCGTTTTTTTTCGGTCTCCAATCAAGAGTAAAAAAGAAATGGGAGGAACAAGGACTAACCATTGCAATAATAGTGAGGTTAAAAAATATTTAGTATTCCGGAAAAAAAGTTTATCCTATTTTTAGTTGCCACCTTGTAAAATTAAAAAAGTTCTATATATCATGAGGTCTAAATTCTTAGTAGTACTTTCTTTTAAAATGTGCGACCTGGGAATTATAAAAAAGTAGACCTGATTTAACTTGTAAAATTAAAATCCTTGTATAATTAATAGTTAATAACATATAGACATGATAATATGGATGTATATATTATCTAACATTTGCATGGATATTGAAATTTTAAAAAGATAGAGGTAAACTCATATGTTTAATAGTTAGAGAAGGAAAAAGAAAGGTAGAAGACAGAAAGAAACCTTGTTTAGATAATTTTAAACCATCAAGATTGTATATAGTACATAAAGAAAAAGTTAGTACTCACTTTTTCTATTAAAAATTTTATTCATAAGGAATAAATATACAACTTCAATATAGAACTAGTTGAGATTCAAAGATTAATGTTTTGTAATCATTTAGTCTTTTATTTTTTAAAATGAAGCTTATAAATATTTTTTTTCTACTTTTTACGTTGTTAATTTAGCATATAAAAGTACAAATTATCATTTTAAAGGTTATGATTCCATCTCTAGTCTTGTAATTGATGAACTCAAAAAACTAAACTTAAATTTAAACAGGGAAGAGATAAATACTCTCATCAAATAATAGGCTAGAAAAATGCCCAAAGATTAAGTATAAAACACAAAAACCAGAAATCCAACTAAACAAATACTGAACACCAATAAGCTAAACTACAATTCTCAAAGTCGACACCACACTTCGGAATCACAAAAAGCTGAATTACAGTTCAAAAAACCTTCTACGTTCTTCTACACCACGAAAATAACTCGTTTTCTTCTATCTTTCAAAATAATAATAATAATACTAATAAATAAAATAAATTTAATAACTCGTTCTCTTCTATTGCGTTTTTTGTTTTTGTTTTAAAAACAAAGATGTTTGATAGTTAATAATGCGTTCTATTATTTAAAATTTGAATTCCAATATTGTCTTCCAACACTATTATCTTTTCTCTTTAACGGGACGTTTAGATCGCAGAGTTGAGTTGGGTTGAGTTGTGCAGAGTTATTTTGTTAGTGAGTTCTAGAAATCAGTATTTGGATTTTAGAGTTGAGTTGACTTGAGTCAGGAAGTGTTTGGGGTGTAGAGTTGAGTTATTATGTCAGGGGTATCTGGTGCAGTTTTTTGTAAAGTGAATAAGTTTGATTTTTTTTACTTTTTTCCTTACATTTTTTGTTTCCACCAAATCAATGACAACCATATTTGCCTACAATTTCAAAATTTCATTATGAGATCAACTATAAATTTACAATATATATTACTATTTGCAAGATTTATGAGATATTTAGAAAAGTATTAGATATTGGGATTGATACCAATTTTTCTTTTCCAATAACATTTACTTTTTATCTTATGTTATTGAGAACATATTCTTTAATATGAAGCAGTTTCTTCTTTTTAAGCACATGTTCACCATTAATCTATTTATTTTAATGTAATTAGGTATTAGTATTAATACTTTGCAAGAAAAACGTGTATTCATTGTCTACAAATCAAATACAAACACATTTGTGTACAATTTCAAAACTCAATTATGTGATCAATTATAAAATTACAATATATATTACTATTTTCCAAATATATGTTAGGGATATTGGCAAAAGTAATGGATATTGGGTTTAATATCAATATTTTTTTCCAATAAAATTTATTATTTAGAACTTTTACTCTTCAATATGAATATTATTCATTTTTTTATGCACATATTCACCACTACTTTTTTATTTTAATTTAGGTAGGTATTAGTATTTATACTTTGCATATGAAGAATGTTTATTTAAATTTTTCTAAACACAAGCATTGTCTATGGACATCTTTAGAATGAAATAAATAGTTTACCTCGTGAAAATGTTAAAAATATACCAACATACTTGAATATTTTATGTCATATTGAAGTTGCATATCTACAAAATATTAGATATGTCATCAATGTTCTAACAACGCCATTATGCTGCCAAAATTTTCGGTGCAGGCGGTGTTGCTTGGTAATGTCCCTAGGAAATTTTGGGTTAAAAAAATTAGGGTCGTTATAGTTGGTATCAGAGCATGAGTTTTAGATTTTGCATACTCGCCTACATCGTAGGCAACGATCATCATAGCCTCTCGTAGGAAGTCGCCTCGTCATCTCCAGATTTTCTTTTATTTTTTAAAGTAGTTAAAGTTATTTGAGTTGTTTATGTGTTAACATTTGTTATGCTATGCTGTTAACTTATTTGTTCTTGTGCTAAGATAGTTTAGAGTTTAAGTTTAGATTATGGTTCGAGGACGTGGCCGTTGTAAAGTTCTAGCAACTTTCGAGGACGAAAGTTTTTCTTAGATAGGTATATTGTAACAACCCGTAAAATTAGGTGTGTTTAATTGTATTTGTTTTAAATTTAAATTTTTGGATAATTAGATTAGGAAATGGTGTTTTAAAGTTTAAAAAAAGATAAGGATTTCTATTTGAAAAAGGTTTTGGGATTCTTTTTTCTAAAAAGATTAGAATTCCTTATTTTAAAATGATTAGGACTTTTTGGTGACTTTTTGGTGCCTATTTAAATGCACACTTCAAAACTCTTCTTCTTCTCATTTTCTCCACTTTGTTCATCTCGTCGGACCGTCGTCGGAAAGTCACCGGACCGTCGTCGGAAGGTCGTCGAAAAGTCGTCGGACCATCGTCGGACCACTACCGGAAAGTACTGTACGGGTGAGTTAATAACTCAACTCTATGGGGTTGAGTTATTAAGTCACCGGTTATAATTGTTGGTGAGCCAAACAAGAAGTTGGGTTATTAACCCAACTCAACCCAACTCAACCCCAACAACCAAACACCTCCTAACAAATATTTTTGTCCCTAACTTTTTTTCTCATTATTTTTTTTCCGTATCTCTAAAATTTCTTTAATTTTTCTATCTCTAAGGGGTCGTTTAGCCCCATTTTTATATTGGGATGGTTTTGGATTCTAAATCCAAAACCATATTTGGCTCAATGTACTCAAGACCCTTGGTTTTCAAACACAACCCCATGGATTTGTTCTATGTTTTCTTATTTTATTTGTCATCTTCCATTTTCGTCGACTACTTCAGTAACAATTTGGTTACAACTCCGACGACCACACTGGCGACCCCACCACTGTTGACGGCTACCTCCAACAAGAACTCTGGTGACTCGACCACCACTAATGGCCCCCTGTGACAATAATTTCGGTAACCCAATTACCACTGACAGCTACCTTCGACAACAACTCCAATGACCCAACCATCATTGACGGCTACCTCCGACAACTCCTCCAAGCCACAACCACTGTTGACAGCTACCTCCGGCAAAAACTCCGACGACTCCAACCATCGCTAACGACTACCTCTGACGACAACTTTGATGACCATACCAGCAACCTTGTTGGGATTTGTGCCCTTAAAACTTATGTAATTTTGATCAAATAAATAAAGAGTTATTTATTTTTGATAAAATTATATTATTGATTTATAAATCCAATAAACTAAGCTCAATGGTTATAATGTATCTTGAACAACAGTGTAGTAGACACTATTTGAATTATGTTCAAGATTATAACCTAAATGGTCTATGGTATAAGAATAAGGTTGAACCTTATTCTGGTAACACCATGGATGCGACCCACTTTGTAATTAGTACAAATGAGGTAATCCAACTCATTCATGTGGTAGACATGCGAGTGGGGGCATCCTTTATGAAGAGTTCATACAAGACTGGAATGCAAATTATTAGTCTAACTAGTATAAGGCCGTTAACAGGATAAGACTGATAATTTATAGATGGTCATTAGTGACTCGACCTGAATCCTGAGCAAGTTAAGAACTCTTGCTTATAGGGGTTTGTCCTTAGACTAGTATGGGTGAGAGTGGCCTGTAGCCGACTTAATAAGTCTACCTTTTCAGGGACAGAACCTCGTAGGTACCTGGGGACTTAACTAAACAAGATGGAATTCACTCATTCCTACACTAAGGAATTAGATAGGTTGTTCCATTAAGAACTAACTCCAGGTCTTGAACAATGGGGCTCCACCCTCTAAGAGGGTATGAGTCTATGGTAGGACCATAGACTTGTTGTTCATTAGAGAATCGGTGGTGCTTAAGGAACAATGAGGTAATCACAGGGGTAAAACGGTAATTTGACCCCGCCGTGATTACAAACAACCTGTGAAGGGTCGACTCATGGGTAATGATAATATCAGTGGACACAATATAATCTACAGTGAGAAGAGTGCAACAACAAGTCTATAGTGGAGTGACTTGTAGTTAAGGAATATTGATTAACTGGATCAAAGAGTTTGATTAGTTAATCTCACATCATTGGACCTCTCATGAACTGTAGGTCCATTAGGTCCCTCCGTTGGCTCAACATGGTAATATTGAGGGTATAAAGTTAGGAATGAAATTGAAGTGTTCAATTTCATATATGAGGTGTTATATCAGTTATATGTGTTATATAGTTATATGTGATATAATTGATATAATATATAGTTTTAATGTGAATTAGATTCACGTATTAACTATATACCAATGAGAGAATAAATGAGGGATAGGATGGTAATTTCTACCCTATTTCCCTATAAATAGTTGCATGAGATGCAACTTTGAGACTAAGCTTTTTTGAGAAACCCTAGAGCATCATATAGTTGTGTTGGAAGAGTTCCACATACAACCACCCTCACGACCTCACAACCTATCCAAGAAGGAACCCACATTCCTCACTCACCTAGAGAATAACAGAGAAGATCTGGTGGTAGTGTCCGTGATCGTTCGGATTCGAGTTGCTAAGATCGTGATCGTGGGAGAAGGAGTACTTGAAGAAAAAGTTCTTCAAAGGTTATATCTTGTTGTTCATATTGTAGAAGCATGCTTATTTTAGATCTAGTTCTTGTTTATGATATCTATGTAACAAAATTAAGAACACGCGATTCACAATCGATTCCGCTGCGGGATTCGATTCCCTTTAGACCTAACCATCGCTAACGATTACTTTCGACGACCACTCAAGAGACTTATATACACCTACCCTAACAACCTGATCACTTGAGCAATCAACTACCCTAACAACCAACTTGCTCACAACAACCACCAACGACAACTCAACAAACCACTTCGACGAGCCAACCACCTGGCAACCACCACTTACGACCACCCTAACAACTCGACCACCCAACAATCACCATCAAGGAGCACCTGTTGACCACACCCAAACGACCCGACCACTCCGATAATCACTTCGACAACCACCTTAAGGACTCAACCATCCAACAACAATCTTAGTGACCCGATCACTCGACAAACCACTATCACCAACCACCATCAACAACCTGACCACCCTAGCAACCACTGTCGATGACCACTCGTTGACCACTCTAGTGATAACCCCGATGACCCGACCACCTAACAACACGACAACCTTGATGATCACTCTAACGAACACCCTATAACTACTCTAGGGACCTACCACCCGACAACCACCGTCCACGATCACCGCAGTAACCCAACCACCCCAACGACTTGACCACCTAGTTAATTTTTTTTTTTTAAAAAAATAAAGTAAAAATGTATACTAAATAAAAATTTTAATTTCTAAAAAAGAGTTTCAGAAATAGGATTTTGAATATTTTGTGAAATAGAGTCTGAAATATCTTAATTTCTTAATTATGCTTATTAGTTTTTTTTTAAAAAAAATCTAAAACAGAGTTCAAAAATTAGGTTGAGATATAGGTTTAGATTCCAGAATTTATTAAATAAACTTCTACTTCTTAATTTCTAAAATAAAATTGTAAAAAAAGTTTTCTAAATAATTTGTGAAACAAAGTTTTAAAATTTTAAATTTCTTAAAAACATTTCTAATTTTTTAATTTTTAAAATAGAGTTCCAAAATTAGGTTTTTGGATACTTGTGGTATAAAATTTTAAATTCCCTAACTACTTAAAGACTTCCAATTTTTTAATTTCTAACATTGAATTCCAAAACAGTTTCAAATTCTCTTATTCATTAAATATACTTCTAATTTTTAAAATTGTTAGAGTAGAGTTCCAAAAAATAGTTTTCAGAATCTTTGTGATGTGAAATAGAGTTTTAAATTCCCTACTTTCTTAAATAGACTTCTATTTTTTTTTTATTTTTAAAATAGAGTTCCCAAAGTACTTTTCAAAATATTTTTTGAAATAGAGTTTTAAATACCTAATTTCTTAAATAGATTTTTAGTTTTTAATTTCTAAAATAGAGTTCCAAAAATACTTTTCTAAATACTTTGTAAAATAGAGTTTCAAAATCCAATTTCTTCCCTATATAAACTTCCAATTTTTTAATTTCTAAAATATAGTTCTAATTATATAACTCATTTATGTTATACAAGAGTTTCTACAATTGACAAAGCATATCCACTAAAAATAAGAGAATATAAGAGAACAAAACAACTAAAGGAAAAAGGAAAAAAAGAAAAATATAGCATCATCCTAAGATTCTGAACACTACACCTCAAACGTTTTCTTAATCTCATACTTTATAACACTGCACTACAAACACAATTTTGTGATTCCCAAGTTTAAGAACTCTCCAGAACAAACCTCTCAGAGTTTTGATTCCAAGACAGGGAGTCAAACAACCCCTAAAAAGTCTCAATTTTTCTACCTTATTTAGGGGCACTTGTAATAATTGCAAAAAAGTTTGACCCAATTATGAACTTGTTTATTCTTTATCCTATTTGCAAATGAATAATACTTGGGTGTTGCCAAGATAGCACCCGAGTGATATGCTCTCAATTGATAGCCACAATTTTTTTTTTTAAGAACAAATTTTGTGGATACAAAATGGGTTGCACCACAGGTGAGTGCAACCCTGGCAACACCTAAGTGTTGCTCTTTGCAAATATAGCAAAAAAGTCAATCCAACCGAAATAGAATGTGCGGAAAATCCAAAATGACCTCTTATTTAATTTCTTTTTTTTAATCATGGGATTTTGTAACATGAAGTATCTCGATAATCTATTAAGGATGTACTGTTGATATACCTAATATAAAGTATATCATCAGTAATATATTGCAGATATACTTTATTTAGATATATTAATGAAATGAAATTTTTAATATTCAATATATTAGTAGTATATCAAAAATACTTAATATGAAGTATATAAAGTGAAGGGAATCGAAGTCCCCGCAGCGGAAGCGATTGTGAATCGCGCGCTCTTGATTTAGTTACAACGGAAAATGCAAGAACGTAAAACATAGATTAAGCATAAAATACAGAAATGGACAGCAAGTATATTACCTTTGAAGAACCTTTCTTCAAGTGTTCCCCTCTCCACGGTCACGATCTCAGCAACAAGAACTTGTACGAACACCGACACCACCACCGGATCTTCTCCGTTGTTCTCTAGGTGGGAGAGATTTGTATTTTGGAACACTTCAAACAACACAACAAGGAGGCTTGTAAAAACTTTCTCAAAGTCTTGACCAAAAGTCTTAACCTAGTTGCATCTCATGCAACTATATATAGGGGAATGGTATGGAAATGACCATTCTACCCCTCATTTAATCTCTCTTTAGTATATAGTTTATATATGAATCTAATTCACATTAAAACTATCAATTACATCATATATAATTGATATAACTCATCATGTATGAAATTGAACACTTCAATTTCACTCCTAACTTTATTCCCTCACTATTACCATGTTGAGCAAACGGAGGGATCTAATGGACCTACAGATCATGAGCTCCAATAATGTGAGATTAACTGATCAAACTCTTTGATCCAATTAATCAATATTCATTAACTACAAGTCACTCCACTATAGACTTAGACTTGTAGTTGCACTCTCCTCACTGTAGATATTATTGTGTCCACTGATATAGTCATTACCCATGAGTCGACCCTTCACAGGTTGTTCGTAATCACAGCTGGGTCAAATTACCGTTTGACCCCTGTGATTACCTCTTTGCTCCTTAAGCACCACTGATCCTCTAATTAACAACAAATCTAAAGTCCTACCTTAGACTCATACCCTCATAGAGGGCGGGGCCCCGTTGTTCAAGACCTGGAGTCAATTCTTAAGGGAACAACCTATCTGATTTTTCAGTAGAGGAATGAGTGAATTCCATCTTGCACAGTTAAGTTCCCAGCTACCTACGAGGTTCTGTCCCTGAGAAGGTAGGCTTATTGAGTCGGCTACAGGCCACTCTCACCCATACTAGTCTAAGGACAAACCCCTATAAGCAAGAGTTCTTAACTTGCTCAGGATTAAGGTCAAGTCACTAATGACCATCTATAAATTACTAGTCTTATCCTCGTTAACGATTGTTATAATTTGGTTAGACTAATAATTTATGATCCATCTCTTGTATGAACTCTTCATACAGGATGCCCCCACTCGCATGTCAACTACATGAATGAGTTGGATTACCTCATTTGTACTAATTATAAAGTGGGTCGCATCCATGGTGTTACCAGAATGAGGTTTCCAACCATATTCTTATACCATACACTGTTTAGGTTATAATCTTGAAGTCAACCCAAATAGTGTCCACTACACTGATTTCAAGATAAACGTTATAACCTTGGAGTTTAGTTTATTGGATTTAATAAAAGCAAGACTGTAATCTTATCAAAACAAATAACACTTTATTTAATTGATCAAAATTACACAAGTATAGGGCATAAATCCCAGCATAAAGAATATGAAAGTAATTTAACTTAAGTATATTAGATATACTTAATATGAAGTATATTAGTGATATAGTACCGATACTCTATTTAGGAATACCAATGAAATAACATTCTTAATATAAAATATATTAATATTATATCGGTAATTCATAATTAATATAACATATATATGTATATGAAGTATATCAAACGTATACTATAAATTCATATATGAGATATGTACCTAATATGAAGTATATCAGTGATATATTATTGATATACTTGATTTGAGTTTTTGTTTTTATTCATGAATTTTTGTCACCACTTTTTTATTGATGTATTAGTTTTTAATCGATACACTAATCTAGAACTATCTTAGTAGTAAATGAATGATAAATATTATACTAATATACTGCATTTCAGGTATTATTTCATTGATATATCTAATATGGAGTATGTCAATCGTATATTAGTACTACACTTCATTATACTAGATATACTACTGATATACTTTTTTTTAGTTATTGAAATTATCAATAGTTATTTGTAACTTAAGGCGATGAAACATATCATTTAATGAAGTATATCAGTGATATACTACTAATACACTCATTGTTGTTAGGTATATTAGTGATATACCAAATATGCAAAATATCCTGTTATATCGATATGCTTCATATAGAGTCTTTCATTTACCTGATATACCTAAAAGGAAGTTTATCAGTAGTATATCACTAACATAGTTTTAATATACTTCATTTTAAATATATATCGATTTACCGATATACCAACTGTAAAGTTTATTAGACATAATACTGATATAATATTAATATACCAAATATAAAATATATTAGATATACTACTTATATACTTGTTGATATACCAATAAAGAAAAAATTAGTATAATAAAAAAACGAAAAAAACAAATTTCAAAAATTTTGATATATTTGCAAATCTCCAAAAACCATTACTATATTTGTAAATATAGTAATATTATTTTCTACCCTTTATTTATCAGATCTCACTTTACTCTCTTAAAATCTTAACATTTACTCCAATTATTTTTTTTGTCTAAAATTTCTCCGTACATAACTTTTCATTCTCTCTCATTAAATTTGTAACTTTTCTGCTTTTCTAATTTAGATTTCTCTTTGTTCTCTAATTCGATTGCCTCTCGAACAATTAAACCTCTAATTTCTCTCTAACTTTTTTTAATCTATAATCGAACGTTTATTTCTCTTTCCCTAACTAATATTCTGTCTCAAAAGATTTCGTGTTTGACAAACGATACTACAATGTATTGGAAGTGAACAAAACAAGCTATGAGAACTGCAACGATGAGGACTTCATAAAGAACATTACAAGAGGTGGACGAGATGTCTTTCAGCTGGCGGAGTTGCGGCCCTATTTTTTCATTGGCGGCGGCGGCTACTGCTTTCAAGGAATGAAACTCGCTGTCTTTGTGTCGGCCACCACCATAGCCCCGTCTGCTTCGCCGCCTGCCGCTACAAAAAATGGTGCCTATTTATTAAACCCCACTTGTTGGTTTTTGAATGCTCTTGTGTTTTTTCTAGCTCTTTTCTTTGTGATTAAGATTGAGTGA

mRNA sequence

ATGGAAATGGGAATAGGAGGAAGTAGAATAAGAATGGTAGTATTAGTAGTGGCAATCGCTTGTGGAGGGTTGGTGGTAAGAGTTGCAAAGGGAGAGAAGCTTCATAAGGTGGGCAATTCACAAGGATGGAGCCCTAATCTAAACTACACCCCTTGGTCCAACACTCACCATTTCTATCTTGGTGATTGGCTTTATTTCGTGTTTGACAAACGATACTACAATGTATTGGAAGTGAACAAAACAAGCTATGAGAACTGCAACGATGAGGACTTCATAAAGAACATTACAAGAGGTGGACGAGATGTCTTTCAGCTGGCGGAGTTGCGGCCCTATTTTTTCATTGGCGGCGGCGGCTACTGCTTTCAAGGAATGAAACTCGCTGTCTTTGTGTCGGCCACCACCATAGCCCCGTCTGCTTCGCCGCCTGCCGCTACAAAAAATGGTGCCTATTTATTAAACCCCACTTGTTGGTTTTTGAATGCTCTTGTGTTTTTTCTAGCTCTTTTCTTTGTGATTAAGATTGAGTGA

Coding sequence (CDS)

ATGGAAATGGGAATAGGAGGAAGTAGAATAAGAATGGTAGTATTAGTAGTGGCAATCGCTTGTGGAGGGTTGGTGGTAAGAGTTGCAAAGGGAGAGAAGCTTCATAAGGTGGGCAATTCACAAGGATGGAGCCCTAATCTAAACTACACCCCTTGGTCCAACACTCACCATTTCTATCTTGGTGATTGGCTTTATTTCGTGTTTGACAAACGATACTACAATGTATTGGAAGTGAACAAAACAAGCTATGAGAACTGCAACGATGAGGACTTCATAAAGAACATTACAAGAGGTGGACGAGATGTCTTTCAGCTGGCGGAGTTGCGGCCCTATTTTTTCATTGGCGGCGGCGGCTACTGCTTTCAAGGAATGAAACTCGCTGTCTTTGTGTCGGCCACCACCATAGCCCCGTCTGCTTCGCCGCCTGCCGCTACAAAAAATGGTGCCTATTTATTAAACCCCACTTGTTGGTTTTTGAATGCTCTTGTGTTTTTTCTAGCTCTTTTCTTTGTGATTAAGATTGAGTGA

Protein sequence

MEMGIGGSRIRMVVLVVAIACGGLVVRVAKGEKLHKVGNSQGWSPNLNYTPWSNTHHFYLGDWLYFVFDKRYYNVLEVNKTSYENCNDEDFIKNITRGGRDVFQLAELRPYFFIGGGGYCFQGMKLAVFVSATTIAPSASPPAATKNGAYLLNPTCWFLNALVFFLALFFVIKIE

Homology

[Close]

BLAST of Tan0006213 vs. ExPASy Swiss-Prot
Match: Q39131 (Lamin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g15350 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 5.3e-26
Identity = 60/134 (44.78%), Postives = 83/134 (61.94%), Query Frame = 0


Query: 11  RMVVLVVAIACGGLVVRVAKG--EKLHKVGNSQGWSPNLNYTPWSNTHHFYLGDWLYFVF 70
           R  VL+ A+    L+     G   K + VG ++ W+PN+NYT W+   HFYLGDWLYFVF
Sbjct: 3   RFTVLITAVVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYFVF 62

Query: 71  DKRYYNVLEVNKTSYENCNDEDFIKNITRG-GRDVFQLAELRPYFFIGGGGYCFQGMKLA 130
           D+  +N+LEVNKT YE C  +  I+N TRG GRD+  L + + Y+ + G G C+ GMKL+
Sbjct: 63  DRNQHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLS 122

Query: 131 VFVSATTIAPSASP 142
           V V      P ++P
Sbjct: 123 VKVEKLPPPPKSAP 136

[Close]

BLAST of Tan0006213 vs. ExPASy Swiss-Prot
Match: Q9T076 (Early nodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g27520 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 6.3e-11
Identity = 43/116 (37.07%), Postives = 60/116 (51.72%), Query Frame = 0


Query: 37  VGNSQGW--SPNLNYTPWSNTHHFYLGDWLYFVFDKRYYNVLEVNKTSYENCNDEDFIKN 96
           VG S  W  +P  NY  WS  + F + D LYF + K   +VLEVNK  Y+ CN ++ IK 
Sbjct: 33  VGGSGAWVTNPPENYESWSGKNRFLVHDTLYFSYAKGADSVLEVNKADYDACNTKNPIKR 92

Query: 97  ITRGGRDVFQLAELRPYFFIGGG-GYCFQGMKLAVFVSATTIAPSASPPAATKNGA 150
           +  G  ++  L    P++FI G    C +G KL V V +  I  +A  P A   G+
Sbjct: 93  VDDGDSEI-SLDRYGPFYFISGNEDNCKKGQKLNVVVISARIPSTAQSPHAAAPGS 147

[Close]

BLAST of Tan0006213 vs. ExPASy Swiss-Prot
Match: Q96316 (Uclacyanin-3 OS=Arabidopsis thaliana OX=3702 GN=UCC3 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.6e-09
Identity = 40/110 (36.36%), Postives = 57/110 (51.82%), Query Frame = 0


Query: 36  KVGNSQGWSPNLNYTPWSNTHHFYLGDWLYFVFDKRYYNVLEVNKTSYENCNDEDFIKNI 95
           KVG+  GW+ NL+YT W     F +GD L FV+    ++V  V+K  Y+NC+     +N 
Sbjct: 25  KVGDISGWTSNLDYTVWLTGKTFRVGDTLEFVYGLS-HSVSVVDKAGYDNCDSSGATQNF 84

Query: 96  TRGGRDVFQLAELRPYFFIGGGGYCFQGMKLAVFVSATTIAPS--ASPPA 144
             G   +        +F     G+C  GMKLAV V A   +PS  +SPP+
Sbjct: 85  ADGDTKIDLTTVGTMHFLCPTFGHCKNGMKLAVPVLAAAPSPSTPSSPPS 133

[Close]

BLAST of Tan0006213 vs. ExPASy Swiss-Prot
Match: Q02917 (Early nodulin-55-2 OS=Glycine max OX=3847 GN=ENOD55-2 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 7.7e-09
Identity = 48/154 (31.17%), Postives = 76/154 (49.35%), Query Frame = 0


Query: 15  LVVAIACGGLVVRVAKGEKLHKVGNSQGWSPNL----NYTPWSNTHHFYLGDWLYFVFDK 74
           LV+   C  L++  ++ EK    G+ + W   L    + + W+N+H F +GD L F ++K
Sbjct: 12  LVMLAMC--LLISTSEAEKYVVGGSEKSWKFPLSKPDSLSHWANSHRFKIGDTLIFKYEK 71

Query: 75  RYYNVLEVNKTSYENCNDEDFIKNITRGGRDVFQLAELRPYFFIGGG-GYCFQGMKLAVF 134
           R  +V E N+T YE CN       +  GG     L +     FI G   +C  G+KLAV 
Sbjct: 72  RTESVHEGNETDYEGCNTVGKYHIVFNGGNTKVMLTKPGFRHFISGNQSHCQMGLKLAVL 131

Query: 135 VSAT--------TIAPSASPPAATKNGAYLLNPT 156
           V ++        + +PS SPP ++     LL+P+
Sbjct: 132 VISSNKTKKNLLSPSPSPSPPPSS-----LLSPS 158

[Close]

BLAST of Tan0006213 vs. ExPASy Swiss-Prot
Match: P80728 (Mavicyanin OS=Cucurbita pepo OX=3663 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.0e-08
Identity = 30/99 (30.30%), Postives = 57/99 (57.58%), Query Frame = 0


Query: 34  LHKVGNSQGWSPNL--NYTPWSNTHHFYLGDWLYFVFDKRYYNVLEVNKTSYENCNDEDF 93
           +HKVG+S GW+  +  +Y  W++++ F++GD L F ++ +++NVL+V++  +++CN    
Sbjct: 3   VHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSP 62

Query: 94  IKNITRGGRDVFQLAELRPYFFIGGGGYCFQGMKLAVFV 131
             + T G   +        YF  G  G+C  G K+ + V
Sbjct: 63  AASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKV 101

[Close]

BLAST of Tan0006213 vs. NCBI nr
Match: XP_022926318.1 (lamin-like protein [Cucurbita moschata] >KAG6588504.1 Lamin-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022335.1 Lamin-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 251.1 bits (640), Expect = 6.8e-63
Identity = 120/167 (71.86%), Postives = 141/167 (84.43%), Query Frame = 0


Query: 9   RIRMVVLVVAIACGGLVVRVAKGEKLHKVGNSQGWSPNLNYTPWSNTHHFYLGDWLYFVF 68
           R+R+++++VA+A   L    A GEKLHKVGNS+GW+PNLNYT WS++H FYLGDWLYFVF
Sbjct: 5   RVRVIMVIVAMAWATL----AMGEKLHKVGNSKGWNPNLNYTLWSSSHRFYLGDWLYFVF 64

Query: 69  DKRYYNVLEVNKTSYENCNDEDFIKNITRGGRDVFQLAELRPYFFIGGGGYCFQGMKLAV 128
           DKRYYNVLEVNKTSYE+CN+++FIKNITRGGRDVFQL ELRPYFFI GGGYCFQGMKLAV
Sbjct: 65  DKRYYNVLEVNKTSYESCNEKEFIKNITRGGRDVFQLTELRPYFFIAGGGYCFQGMKLAV 124

Query: 129 FVSATTIAPSASPPAATKNGAYLLNPTCWFLNALVFFLALFFVIKIE 176
            V  T +AP+A P A   +GA L NPTCW +NAL+ F+ALF VIKIE
Sbjct: 125 LVCPTAVAPAAPPSATPISGASLSNPTCWIMNALMLFVALFLVIKIE 167

[Close]

BLAST of Tan0006213 vs. NCBI nr
Match: XP_023530289.1 (lamin-like protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 246.1 bits (627), Expect = 2.2e-61
Identity = 117/164 (71.34%), Postives = 138/164 (84.15%), Query Frame = 0


Query: 9   RIRMVVLVVAIACGGLVVRVAKGEKLHKVGNSQGWSPNLNYTPWSNTHHFYLGDWLYFVF 68
           R+R+++++VAIA      RVA GEKLHKVGNS+GW+PNLNYT WS++H FYLGDWLYFVF
Sbjct: 5   RVRVIMVIVAIAW----ARVAMGEKLHKVGNSKGWNPNLNYTLWSSSHRFYLGDWLYFVF 64

Query: 69  DKRYYNVLEVNKTSYENCNDEDFIKNITRGGRDVFQLAELRPYFFIGGGGYCFQGMKLAV 128
           DKRYYNVLEVNKTSYE+CN+++FI NITRGGRDVFQL ELRPYFFI GGGYCF+GMKLAV
Sbjct: 65  DKRYYNVLEVNKTSYESCNEKEFINNITRGGRDVFQLTELRPYFFIAGGGYCFEGMKLAV 124

Query: 129 FVSATTIAPSASPPAATKNGAYLLNPTCWFLNALVFFLALFFVI 173
            V  T +AP+A P A   +GA L NPTCW +NAL+ F+ALF VI
Sbjct: 125 LVCPTAVAPAAPPSATPISGASLSNPTCWIMNALLLFVALFLVI 164

[Close]

BLAST of Tan0006213 vs. NCBI nr
Match: XP_022970103.1 (lamin-like protein [Cucurbita maxima])

HSP 1 Score: 241.9 bits (616), Expect = 4.2e-60
Identity = 116/167 (69.46%), Postives = 137/167 (82.04%), Query Frame = 0


Query: 9   RIRMVVLVVAIACGGLVVRVAKGEKLHKVGNSQGWSPNLNYTPWSNTHHFYLGDWLYFVF 68
           R+R+++++VA+A        A GEKLHKVGNS+GW+PNLNYT WS++H FYLGDWLYFVF
Sbjct: 5   RVRVIMVIVAMAW----ATDAMGEKLHKVGNSKGWNPNLNYTLWSSSHRFYLGDWLYFVF 64

Query: 69  DKRYYNVLEVNKTSYENCNDEDFIKNITRGGRDVFQLAELRPYFFIGGGGYCFQGMKLAV 128
           DKRYYNVLEVN+TSYE C +++FIKNITRGGRDVFQL ELRPYFFI GGGYCFQGMKLAV
Sbjct: 65  DKRYYNVLEVNETSYEGCTEKEFIKNITRGGRDVFQLTELRPYFFIAGGGYCFQGMKLAV 124

Query: 129 FVSATTIAPSASPPAATKNGAYLLNPTCWFLNALVFFLALFFVIKIE 176
            V  T +AP+A P A   + A L NPTCW +NAL+ F+ALF VIKIE
Sbjct: 125 LVCPTAVAPAAPPSATPISRASLSNPTCWIMNALLLFVALFLVIKIE 167

[Close]

BLAST of Tan0006213 vs. NCBI nr
Match: XP_008443357.1 (PREDICTED: lamin-like protein [Cucumis melo])

HSP 1 Score: 229.2 bits (583), Expect = 2.8e-56
Identity = 121/176 (68.75%), Postives = 140/176 (79.55%), Query Frame = 0


Query: 6   GGSRIRMVVLVVAIACGG---LVVRVA-KGEKLHKVGNSQGWSPNLNYTPWSNTHHFYLG 65
           G  RIR +  +V + CG    LVVR+  KGE LHKVGNS+GWSPN NYT WS +HHFYLG
Sbjct: 8   GSGRIRFIRKMVMV-CGWLLLLVVRIGIKGEVLHKVGNSEGWSPNQNYTHWSTSHHFYLG 67

Query: 66  DWLYFVFDKRYYNVLEVNKTSYENCNDEDFIKNITRGGRDVFQLAELRPYFFIGGGGYCF 125
           DWLYFVFDKRYYNVLEVNK SYE+CND+DFIKNITRGGRDVFQL+EL PYFFIGGGGYCF
Sbjct: 68  DWLYFVFDKRYYNVLEVNKRSYEDCNDKDFIKNITRGGRDVFQLSELHPYFFIGGGGYCF 127

Query: 126 QGMKLAVFVSATTIAPSASPPAATKNG---AYLL-NPT--CWFLNALVFFLALFFV 172
           QGMKLAV+VSA   AP+ SP A+ K+G   ++L  NPT  C  LNAL+ F+A+F +
Sbjct: 128 QGMKLAVYVSAVDSAPAPSPAASNKSGGGASFLSNNPTFCCSVLNALLLFVAIFLL 182

[Close]

BLAST of Tan0006213 vs. NCBI nr
Match: KAA0053800.1 (lamin-like protein [Cucumis melo var. makuwa] >TYK25601.1 lamin-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 226.1 bits (575), Expect = 2.4e-55
Identity = 116/165 (70.30%), Postives = 134/165 (81.21%), Query Frame = 0


Query: 17  VAIACGG---LVVRVA-KGEKLHKVGNSQGWSPNLNYTPWSNTHHFYLGDWLYFVFDKRY 76
           + + CG    LVVR+  KGE LHKVGNS+GWSPN NYT WS +HHFYLGDWLYFVFDKRY
Sbjct: 1   MVMVCGWLLLLVVRIGIKGEVLHKVGNSEGWSPNQNYTHWSTSHHFYLGDWLYFVFDKRY 60

Query: 77  YNVLEVNKTSYENCNDEDFIKNITRGGRDVFQLAELRPYFFIGGGGYCFQGMKLAVFVSA 136
           YNVLEVNK SYE+CND+DFIKNITRGGRDVFQL+EL PYFFIGGGGYCFQGMKLAV+VSA
Sbjct: 61  YNVLEVNKRSYEDCNDKDFIKNITRGGRDVFQLSELHPYFFIGGGGYCFQGMKLAVYVSA 120

Query: 137 TTIAPSASPPAATKNG---AYLL-NPT--CWFLNALVFFLALFFV 172
              AP+ SP A+ K+G   ++L  NPT  C  LNAL+ F+A+F +
Sbjct: 121 VDSAPAPSPAASNKSGGGASFLSNNPTFCCSVLNALLLFVAIFLL 165

[Close]

BLAST of Tan0006213 vs. ExPASy TrEMBL
Match: A0A6J1EHP8 (lamin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111433505 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 3.3e-63
Identity = 120/167 (71.86%), Postives = 141/167 (84.43%), Query Frame = 0


Query: 9   RIRMVVLVVAIACGGLVVRVAKGEKLHKVGNSQGWSPNLNYTPWSNTHHFYLGDWLYFVF 68
           R+R+++++VA+A   L    A GEKLHKVGNS+GW+PNLNYT WS++H FYLGDWLYFVF
Sbjct: 5   RVRVIMVIVAMAWATL----AMGEKLHKVGNSKGWNPNLNYTLWSSSHRFYLGDWLYFVF 64

Query: 69  DKRYYNVLEVNKTSYENCNDEDFIKNITRGGRDVFQLAELRPYFFIGGGGYCFQGMKLAV 128
           DKRYYNVLEVNKTSYE+CN+++FIKNITRGGRDVFQL ELRPYFFI GGGYCFQGMKLAV
Sbjct: 65  DKRYYNVLEVNKTSYESCNEKEFIKNITRGGRDVFQLTELRPYFFIAGGGYCFQGMKLAV 124

Query: 129 FVSATTIAPSASPPAATKNGAYLLNPTCWFLNALVFFLALFFVIKIE 176
            V  T +AP+A P A   +GA L NPTCW +NAL+ F+ALF VIKIE
Sbjct: 125 LVCPTAVAPAAPPSATPISGASLSNPTCWIMNALMLFVALFLVIKIE 167

[Close]

BLAST of Tan0006213 vs. ExPASy TrEMBL
Match: A0A6J1I2W1 (lamin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111469092 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 2.0e-60
Identity = 116/167 (69.46%), Postives = 137/167 (82.04%), Query Frame = 0


Query: 9   RIRMVVLVVAIACGGLVVRVAKGEKLHKVGNSQGWSPNLNYTPWSNTHHFYLGDWLYFVF 68
           R+R+++++VA+A        A GEKLHKVGNS+GW+PNLNYT WS++H FYLGDWLYFVF
Sbjct: 5   RVRVIMVIVAMAW----ATDAMGEKLHKVGNSKGWNPNLNYTLWSSSHRFYLGDWLYFVF 64

Query: 69  DKRYYNVLEVNKTSYENCNDEDFIKNITRGGRDVFQLAELRPYFFIGGGGYCFQGMKLAV 128
           DKRYYNVLEVN+TSYE C +++FIKNITRGGRDVFQL ELRPYFFI GGGYCFQGMKLAV
Sbjct: 65  DKRYYNVLEVNETSYEGCTEKEFIKNITRGGRDVFQLTELRPYFFIAGGGYCFQGMKLAV 124

Query: 129 FVSATTIAPSASPPAATKNGAYLLNPTCWFLNALVFFLALFFVIKIE 176
            V  T +AP+A P A   + A L NPTCW +NAL+ F+ALF VIKIE
Sbjct: 125 LVCPTAVAPAAPPSATPISRASLSNPTCWIMNALLLFVALFLVIKIE 167

[Close]

BLAST of Tan0006213 vs. ExPASy TrEMBL
Match: A0A1S3B8J9 (lamin-like protein OS=Cucumis melo OX=3656 GN=LOC103486965 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.3e-56
Identity = 121/176 (68.75%), Postives = 140/176 (79.55%), Query Frame = 0


Query: 6   GGSRIRMVVLVVAIACGG---LVVRVA-KGEKLHKVGNSQGWSPNLNYTPWSNTHHFYLG 65
           G  RIR +  +V + CG    LVVR+  KGE LHKVGNS+GWSPN NYT WS +HHFYLG
Sbjct: 8   GSGRIRFIRKMVMV-CGWLLLLVVRIGIKGEVLHKVGNSEGWSPNQNYTHWSTSHHFYLG 67

Query: 66  DWLYFVFDKRYYNVLEVNKTSYENCNDEDFIKNITRGGRDVFQLAELRPYFFIGGGGYCF 125
           DWLYFVFDKRYYNVLEVNK SYE+CND+DFIKNITRGGRDVFQL+EL PYFFIGGGGYCF
Sbjct: 68  DWLYFVFDKRYYNVLEVNKRSYEDCNDKDFIKNITRGGRDVFQLSELHPYFFIGGGGYCF 127

Query: 126 QGMKLAVFVSATTIAPSASPPAATKNG---AYLL-NPT--CWFLNALVFFLALFFV 172
           QGMKLAV+VSA   AP+ SP A+ K+G   ++L  NPT  C  LNAL+ F+A+F +
Sbjct: 128 QGMKLAVYVSAVDSAPAPSPAASNKSGGGASFLSNNPTFCCSVLNALLLFVAIFLL 182

[Close]

BLAST of Tan0006213 vs. ExPASy TrEMBL
Match: A0A5A7UEY9 (Lamin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007600 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 1.1e-55
Identity = 116/165 (70.30%), Postives = 134/165 (81.21%), Query Frame = 0


Query: 17  VAIACGG---LVVRVA-KGEKLHKVGNSQGWSPNLNYTPWSNTHHFYLGDWLYFVFDKRY 76
           + + CG    LVVR+  KGE LHKVGNS+GWSPN NYT WS +HHFYLGDWLYFVFDKRY
Sbjct: 1   MVMVCGWLLLLVVRIGIKGEVLHKVGNSEGWSPNQNYTHWSTSHHFYLGDWLYFVFDKRY 60

Query: 77  YNVLEVNKTSYENCNDEDFIKNITRGGRDVFQLAELRPYFFIGGGGYCFQGMKLAVFVSA 136
           YNVLEVNK SYE+CND+DFIKNITRGGRDVFQL+EL PYFFIGGGGYCFQGMKLAV+VSA
Sbjct: 61  YNVLEVNKRSYEDCNDKDFIKNITRGGRDVFQLSELHPYFFIGGGGYCFQGMKLAVYVSA 120

Query: 137 TTIAPSASPPAATKNG---AYLL-NPT--CWFLNALVFFLALFFV 172
              AP+ SP A+ K+G   ++L  NPT  C  LNAL+ F+A+F +
Sbjct: 121 VDSAPAPSPAASNKSGGGASFLSNNPTFCCSVLNALLLFVAIFLL 165

[Close]

BLAST of Tan0006213 vs. ExPASy TrEMBL
Match: A0A0A0LF66 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G824210 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.5e-55
Identity = 117/182 (64.29%), Postives = 142/182 (78.02%), Query Frame = 0


Query: 1   MEMGIGGS-RIRMVV-LVVAIACGG----LVVRVAKGEKLHKVGNSQGWSPNLNYTPWSN 60
           M +G GGS RIR ++   + + C G    ++V + KGE+LHKVGNSQGW+PN NYT WS+
Sbjct: 36  MGIGRGGSGRIRFIIRKKMVMVCTGWLLLIMVTIGKGEELHKVGNSQGWTPNQNYTHWSS 95

Query: 61  THHFYLGDWLYFVFDKRYYNVLEVNKTSYENCNDEDFIKNITRGGRDVFQLAELRPYFFI 120
           +HHFYLGDWLYFVFDKRYYNVLEVNK S+E+CN++DFIKNITRGGRDVFQL EL PYFFI
Sbjct: 96  SHHFYLGDWLYFVFDKRYYNVLEVNKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFI 155

Query: 121 GGGGYCFQGMKLAVFVSATT-IAPSASPPAATKNGAYLL--NPT--CWFLNALVFFLALF 172
           GGGGYCFQGMKLAV++S     AP+ SP  + K+G   L  NPT  C  LNAL+ F+A+F
Sbjct: 156 GGGGYCFQGMKLAVYMSTVDHSAPAPSPAGSNKSGGAFLSNNPTLCCSILNALLLFVAIF 215

[Close]

BLAST of Tan0006213 vs. TAIR 10
Match: AT2G27035.1 (early nodulin-like protein 20 )

HSP 1 Score: 130.6 bits (327), Expect = 1.3e-30
Identity = 62/123 (50.41%), Postives = 84/123 (68.29%), Query Frame = 0


Query: 24  LVVRVAKGEKLHKVGNSQ-GWSPNLNYTPWSNTHHFYLGDWLYFVFDKRYYNVLEVNKTS 83
           L++ V     LH+VG  +  W+ ++N++ W+N   FY GDWLYF F++  +N+L+VNK+S
Sbjct: 17  LIIVVEVESSLHRVGGGRYTWNSDVNFSDWANHQRFYSGDWLYFGFNRTRHNILQVNKSS 76

Query: 84  YENCNDEDFIKNITRGGRDVFQLAELRPYFFIGGGGYCFQGMKLAVFVSATTIAPSASPP 143
           YE C D D+I NITRGGRDVFQL E +PY+FI G GYC +GMKLA+     T+ P   P 
Sbjct: 77  YEQCVDNDYIFNITRGGRDVFQLLEPKPYYFICGRGYCLKGMKLAI-----TVLPQPPPS 134

Query: 144 AAT 146
           A T
Sbjct: 137 APT 134

[Close]

BLAST of Tan0006213 vs. TAIR 10
Match: AT5G15350.1 (early nodulin-like protein 17 )

HSP 1 Score: 119.0 bits (297), Expect = 3.8e-27
Identity = 60/134 (44.78%), Postives = 83/134 (61.94%), Query Frame = 0


Query: 11  RMVVLVVAIACGGLVVRVAKG--EKLHKVGNSQGWSPNLNYTPWSNTHHFYLGDWLYFVF 70
           R  VL+ A+    L+     G   K + VG ++ W+PN+NYT W+   HFYLGDWLYFVF
Sbjct: 3   RFTVLITAVVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYFVF 62

Query: 71  DKRYYNVLEVNKTSYENCNDEDFIKNITRG-GRDVFQLAELRPYFFIGGGGYCFQGMKLA 130
           D+  +N+LEVNKT YE C  +  I+N TRG GRD+  L + + Y+ + G G C+ GMKL+
Sbjct: 63  DRNQHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLS 122

Query: 131 VFVSATTIAPSASP 142
           V V      P ++P
Sbjct: 123 VKVEKLPPPPKSAP 136

[Close]

BLAST of Tan0006213 vs. TAIR 10
Match: AT3G01070.1 (early nodulin-like protein 16 )

HSP 1 Score: 114.8 bits (286), Expect = 7.1e-26
Identity = 63/141 (44.68%), Postives = 85/141 (60.28%), Query Frame = 0


Query: 11  RMVVLVVAIACGGLVVRVAKGEKLHKVGNSQGWSPNLNYTPWSNTHHFYLGDWLYFVFDK 70
           R+ VLV       L+       K   VG+++ W+PN+NYT W+   HFYL DWLYFV+++
Sbjct: 3   RVAVLVAGAVLAFLLAATNVTAKRWTVGDNKFWNPNINYTIWAQDKHFYLDDWLYFVYER 62

Query: 71  RYYNVLEVNKTSYENCNDEDFIKNITRG-GRDVFQLAELRPYFFI-GGGGYCFQGMKLAV 130
             YNV+EVN+T+Y +CN  + I N +RG GRD+  L   R Y+ I G GG C+ GMKLAV
Sbjct: 63  NQYNVIEVNETNYISCNPNNPIANWSRGAGRDLVHLNVTRHYYLISGNGGGCYGGMKLAV 122

Query: 131 FVSATTIAPSASPPAATKNGA 150
            V      P+A+P    KN A
Sbjct: 123 LVEKPPPPPAAAP---NKNSA 140

[Close]

BLAST of Tan0006213 vs. TAIR 10
Match: AT4G12880.1 (early nodulin-like protein 19 )

HSP 1 Score: 113.6 bits (283), Expect = 1.6e-25
Identity = 61/135 (45.19%), Postives = 79/135 (58.52%), Query Frame = 0


Query: 11  RMVVLVVAIACGGLVVRVAK--GEKLHKVGNSQGWSPNLNYTPWSNTHHFYLGDWLYFVF 70
           R +VL+ A+    LV         K + VG+ + W+PN+NYT W+   HFY+GDWLYFVF
Sbjct: 3   RSMVLISAVVLAFLVAAPIPEVTAKKYLVGDKKFWNPNINYTLWAQGKHFYVGDWLYFVF 62

Query: 71  DKRYYNVLEVNKTSYENCNDEDFIKNITRG-GRDVFQLAELRPYFFIGGGGYCFQGMKLA 130
            +  +N+LEVNK  YE C     I+N TRG GRD+  L E R Y+ + G G C QGMKL 
Sbjct: 63  YRDQHNILEVNKADYEKCISNRPIRNYTRGAGRDIVPLYETRRYYLLDGRGGCVQGMKLD 122

Query: 131 VFVSATTIAPSASPP 143
           V V      P  +PP
Sbjct: 123 VLVETPPPPPPFTPP 137

[Close]

BLAST of Tan0006213 vs. TAIR 10
Match: AT5G26330.1 (Cupredoxin superfamily protein )

HSP 1 Score: 75.9 bits (185), Expect = 3.7e-14
Identity = 46/153 (30.07%), Postives = 84/153 (54.90%), Query Frame = 0


Query: 14  VLVVAIACGGLVVRVAKGEKLHKVGNSQGWS--PNLNYTPWSNTHHFYLGDWLYFVFDKR 73
           ++V A+AC  +++R+++   ++KVG+S GW+   N++Y  W++T  F++GD + F ++ +
Sbjct: 4   IIVAALACIVVMLRLSEA-AVYKVGDSAGWTTIANVDYKLWASTKTFHIGDTVLFEYNPQ 63

Query: 74  YYNVLEVNKTSYENCNDEDFIKNITRGGRDVFQLAELRPYFFIGGGGYCFQGMKLAVFV- 133
           ++NV+ V    Y +CN    I   T G   +        +FF G  G+C  G KL + V 
Sbjct: 64  FHNVMRVTHPMYRSCNTSKPISTFTTGNDSITLTNHGHHFFFCGVPGHCLAGQKLDLHVL 123

Query: 134 ---SATTI-----APSASPPAATKNGAYLLNPT 156
              S+T +     + S+SPP+ T   A +  P+
Sbjct: 124 LPASSTPLSDPPTSSSSSPPSTTIPAAGVPGPS 155

The following BLAST results are available for this feature:

BLAST of Tan0006213 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39131	5.3e-26	44.78	Lamin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g15350 PE=2 SV=1	[more]
Q9T076	6.3e-11	37.07	Early nodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g27520 PE=1 S...	[more]
Q96316	1.6e-09	36.36	Uclacyanin-3 OS=Arabidopsis thaliana OX=3702 GN=UCC3 PE=2 SV=1	[more]
Q02917	7.7e-09	31.17	Early nodulin-55-2 OS=Glycine max OX=3847 GN=ENOD55-2 PE=2 SV=1	[more]
P80728	1.0e-08	30.30	Mavicyanin OS=Cucurbita pepo OX=3663 PE=1 SV=1	[more]

BLAST of Tan0006213 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926318.1	6.8e-63	71.86	lamin-like protein [Cucurbita moschata] >KAG6588504.1 Lamin-like protein, partia...	[more]
XP_023530289.1	2.2e-61	71.34	lamin-like protein [Cucurbita pepo subsp. pepo]	[more]
XP_022970103.1	4.2e-60	69.46	lamin-like protein [Cucurbita maxima]	[more]
XP_008443357.1	2.8e-56	68.75	PREDICTED: lamin-like protein [Cucumis melo]	[more]
KAA0053800.1	2.4e-55	70.30	lamin-like protein [Cucumis melo var. makuwa] >TYK25601.1 lamin-like protein [Cu...	[more]

BLAST of Tan0006213 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EHP8	3.3e-63	71.86	lamin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111433505 PE=4 SV=1	[more]
A0A6J1I2W1	2.0e-60	69.46	lamin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111469092 PE=4 SV=1	[more]
A0A1S3B8J9	1.3e-56	68.75	lamin-like protein OS=Cucumis melo OX=3656 GN=LOC103486965 PE=4 SV=1	[more]
A0A5A7UEY9	1.1e-55	70.30	Lamin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G0...	[more]
A0A0A0LF66	1.5e-55	64.29	Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G824210...	[more]

BLAST of Tan0006213 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27035.1	1.3e-30	50.41	early nodulin-like protein 20	[more]
AT5G15350.1	3.8e-27	44.78	early nodulin-like protein 17	[more]
AT3G01070.1	7.1e-26	44.68	early nodulin-like protein 16	[more]
AT4G12880.1	1.6e-25	45.19	early nodulin-like protein 19	[more]
AT5G26330.1	3.7e-14	30.07	Cupredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 43..124 e-value: 3.7E-18 score: 65.3
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 33..132 score: 30.292809
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 33..142 e-value: 1.8E-25 score: 91.2
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 34..130
None	No IPR available	PANTHER	PTHR33021:SF262	EARLY NODULIN-LIKE PROTEIN 20	coord: 14..141
IPR039391	Phytocyanin	PANTHER	PTHR33021	BLUE COPPER PROTEIN	coord: 14..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0006213.1	Tan0006213.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
biological_process	GO:0032259	methylation
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0016740	transferase activity