Tan0006182 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGTTCTGCAAGGAGGAGAAAGAGCTGGAGCGCCGACAGGCCACCGGCACGTGCCCGTCATGTGGCGGCAAAGTACAGGCTGTGGATGTGGAGAGAAAATGGAGGCTCTGTTTGATTCCGCTCTGTTTCAAAATCAAGAGGAAATATTACTGTGTAACGTGTGGTCGTCGTTTGGAGCTGTATCTTTAG ATGTTGTTCTGCAAGGAGGAGAAAGAGCTGGAGCGCCGACAGGCCACCGGCACGTGCCCGTCATGTGGCGGCAAAGTACAGGCTGTGGATGTGGAGAGAAAATGGAGGCTCTGTTTGATTCCGCTCTGTTTCAAAATCAAGAGGAAATATTACTGTGTAACGTGTGGTCGTCGTTTGGAGCTGTATCTTTAG ATGTTGTTCTGCAAGGAGGAGAAAGAGCTGGAGCGCCGACAGGCCACCGGCACGTGCCCGTCATGTGGCGGCAAAGTACAGGCTGTGGATGTGGAGAGAAAATGGAGGCTCTGTTTGATTCCGCTCTGTTTCAAAATCAAGAGGAAATATTACTGTGTAACGTGTGGTCGTCGTTTGGAGCTGTATCTTTAG MLFCKEEKELERRQATGTCPSCGGKVQAVDVERKWRLCLIPLCFKIKRKYYCVTCGRRLELYL Homology
BLAST of Tan0006182 vs. NCBI nr
Match: XP_008451097.1 (PREDICTED: uncharacterized protein LOC103492473 [Cucumis melo]) HSP 1 Score: 130.2 bits (326), Expect = 6.3e-27 Identity = 57/62 (91.94%), Postives = 59/62 (95.16%), Query Frame = 0
BLAST of Tan0006182 vs. NCBI nr
Match: XP_038891000.1 (uncharacterized protein LOC120080412 [Benincasa hispida]) HSP 1 Score: 129.4 bits (324), Expect = 1.1e-26 Identity = 57/62 (91.94%), Postives = 58/62 (93.55%), Query Frame = 0
BLAST of Tan0006182 vs. NCBI nr
Match: XP_011648964.1 (uncharacterized protein LOC105434563 [Cucumis sativus]) HSP 1 Score: 125.9 bits (315), Expect = 1.2e-25 Identity = 54/62 (87.10%), Postives = 58/62 (93.55%), Query Frame = 0
BLAST of Tan0006182 vs. NCBI nr
Match: XP_022929732.1 (uncharacterized protein LOC111436231 [Cucurbita moschata] >XP_022996867.1 uncharacterized protein LOC111491984 [Cucurbita maxima]) HSP 1 Score: 122.1 bits (305), Expect = 1.7e-24 Identity = 54/62 (87.10%), Postives = 56/62 (90.32%), Query Frame = 0
BLAST of Tan0006182 vs. NCBI nr
Match: XP_023547069.1 (uncharacterized protein LOC111805987 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 120.9 bits (302), Expect = 3.8e-24 Identity = 53/62 (85.48%), Postives = 56/62 (90.32%), Query Frame = 0
BLAST of Tan0006182 vs. ExPASy TrEMBL
Match: A0A1S3BRU0 (uncharacterized protein LOC103492473 OS=Cucumis melo OX=3656 GN=LOC103492473 PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 3.1e-27 Identity = 57/62 (91.94%), Postives = 59/62 (95.16%), Query Frame = 0
BLAST of Tan0006182 vs. ExPASy TrEMBL
Match: A0A6J1K383 (uncharacterized protein LOC111491984 OS=Cucurbita maxima OX=3661 GN=LOC111491984 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 8.4e-25 Identity = 54/62 (87.10%), Postives = 56/62 (90.32%), Query Frame = 0
BLAST of Tan0006182 vs. ExPASy TrEMBL
Match: A0A6J1ENJ0 (uncharacterized protein LOC111436231 OS=Cucurbita moschata OX=3662 GN=LOC111436231 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 8.4e-25 Identity = 54/62 (87.10%), Postives = 56/62 (90.32%), Query Frame = 0
BLAST of Tan0006182 vs. ExPASy TrEMBL
Match: A0A6J1D838 (uncharacterized protein LOC111018230 OS=Momordica charantia OX=3673 GN=LOC111018230 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.9e-21 Identity = 51/61 (83.61%), Postives = 55/61 (90.16%), Query Frame = 0
BLAST of Tan0006182 vs. ExPASy TrEMBL
Match: A0A067JYB9 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_19990 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 1.5e-18 Identity = 42/62 (67.74%), Postives = 51/62 (82.26%), Query Frame = 0
BLAST of Tan0006182 vs. TAIR 10
Match: AT5G57123.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G29905.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 92.8 bits (229), Expect = 1.0e-19 Identity = 40/58 (68.97%), Postives = 46/58 (79.31%), Query Frame = 0
BLAST of Tan0006182 vs. TAIR 10
Match: AT4G29905.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57123.1); Has 73 Blast hits to 73 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 86.7 bits (213), Expect = 7.5e-18 Identity = 36/62 (58.06%), Postives = 46/62 (74.19%), Query Frame = 0
BLAST of Tan0006182 vs. TAIR 10
Match: AT5G10695.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57123.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 68.6 bits (166), Expect = 2.1e-12 Identity = 28/55 (50.91%), Postives = 37/55 (67.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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