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Tan0006137 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATTTATGGTCGACTGAGCCGGTGGGTCCGGTTTTCCGGACTTGAAAATGTTATACAAAACAATTAATTCTCACAATATTATTTTAAAATAAAAAAGATAAAGCCAAAAAGTTGATTGGCAAAAAAAAAAAAGAAAAATTAATTGTAAAAGAAGACGAGGCGTCCGTGATGTAGACTACGCATTCTCTACCACGCGCCTGGTGTCACTATCATTACCCAAACTCTCTCTCTCTCTCTCTAACTTTCTCTCTCTAACTTTCTCTCTCTACTTTGTCCCCTTTATATATCCCTCTTCTCCGCTTTGCCGCCGCACCCTTACCACTGCAAATTCACCCCTTCCGTTCCATTTTCCGATCACCCAATTCCATGGAGGATCTTTCCTCAAACAAACGTCTCCGAGTCGACTCAATCGACTCGGAATCTGACTCACCGGAGGTCAAGCGTCTTAAAGACGACCTCCTCGGCCTCCTCGATGACGCCGACCCCGATCCCGCCGTTCAGGATCTTGATTCCGTCATTCAGAGTTTCGCCGACGAGATCTCCCCTGTCTCCTCTCCGCCGCCGGTTCCGGCGGCCCCCGGCGAGTCCTTCCCGGAGCTCGGGTACCTTCTCCTGGCCTCCGACGACGAGCTTGGCCTCCCGCCGTCCGACGCCTCCACCAGCCACGGCGGTGAAGCCGAGGCGGCGGATCTGGCGCGGGCGTCGTCGGACTCGTCCGGGATCGGAGAGATTTGGGGATTTGAAGATGCGATTCCGAGTTACGAGTCGTTCGAGTTGGGGGAAGGAGGGAGATTTTACAACGATACGGAATATGTGGCGTTCGACGGACTGTTTGAACATTCCGATGTGTACTCCGTTTTCTCGTGACGGCGGCGAAGAAAGATCGGCCGGCGAAGTAGGAGGAAAGAGAAAAAAGAAAAATTACTTTTTATCTCTGAAATGAATATAAAAGGAACACCCCATTTGTAAATCTTTTTTTTTTCATTAATTCCATCACAGAAAAGGAAAATAGGATTAGGCTGATTTAAAAAATGACCACATAAATTATTATAATTACTTCTACAACTATTTGAAGATTTTAGGTTTGGAGTTGATTGTGGTTCCGAAATTTTATGTCCCCAAGTATTTTATTATTTAAAATGTTCTTTACTTGAGGCATTCACATTTAAATGTGGCTAAATTTAAATTATAAAAACTATTTCAGAATTTTGTCCCATCATTTATGAAAATACTTCCACT TATTTATGGTCGACTGAGCCGGTGGGTCCGGTTTTCCGGACTTGAAAATGTTATACAAAACAATTAATTCTCACAATATTATTTTAAAATAAAAAAGATAAAGCCAAAAAGTTGATTGGCAAAAAAAAAAAAGAAAAATTAATTGTAAAAGAAGACGAGGCGTCCGTGATGTAGACTACGCATTCTCTACCACGCGCCTGGTGTCACTATCATTACCCAAACTCTCTCTCTCTCTCTCTAACTTTCTCTCTCTAACTTTCTCTCTCTACTTTGTCCCCTTTATATATCCCTCTTCTCCGCTTTGCCGCCGCACCCTTACCACTGCAAATTCACCCCTTCCGTTCCATTTTCCGATCACCCAATTCCATGGAGGATCTTTCCTCAAACAAACGTCTCCGAGTCGACTCAATCGACTCGGAATCTGACTCACCGGAGGTCAAGCGTCTTAAAGACGACCTCCTCGGCCTCCTCGATGACGCCGACCCCGATCCCGCCGTTCAGGATCTTGATTCCGTCATTCAGAGTTTCGCCGACGAGATCTCCCCTGTCTCCTCTCCGCCGCCGGTTCCGGCGGCCCCCGGCGAGTCCTTCCCGGAGCTCGGGTACCTTCTCCTGGCCTCCGACGACGAGCTTGGCCTCCCGCCGTCCGACGCCTCCACCAGCCACGGCGGTGAAGCCGAGGCGGCGGATCTGGCGCGGGCGTCGTCGGACTCGTCCGGGATCGGAGAGATTTGGGGATTTGAAGATGCGATTCCGAGTTACGAGTCGTTCGAGTTGGGGGAAGGAGGGAGATTTTACAACGATACGGAATATGTGGCGTTCGACGGACTGTTTGAACATTCCGATGTGTACTCCGTTTTCTCGTGACGGCGGCGAAGAAAGATCGGCCGGCGAAGTAGGAGGAAAGAGAAAAAAGAAAAATTACTTTTTATCTCTGAAATGAATATAAAAGGAACACCCCATTTGTAAATCTTTTTTTTTTCATTAATTCCATCACAGAAAAGGAAAATAGGATTAGGCTGATTTAAAAAATGACCACATAAATTATTATAATTACTTCTACAACTATTTGAAGATTTTAGGTTTGGAGTTGATTGTGGTTCCGAAATTTTATGTCCCCAAGTATTTTATTATTTAAAATGTTCTTTACTTGAGGCATTCACATTTAAATGTGGCTAAATTTAAATTATAAAAACTATTTCAGAATTTTGTCCCATCATTTATGAAAATACTTCCACT ATGGAGGATCTTTCCTCAAACAAACGTCTCCGAGTCGACTCAATCGACTCGGAATCTGACTCACCGGAGGTCAAGCGTCTTAAAGACGACCTCCTCGGCCTCCTCGATGACGCCGACCCCGATCCCGCCGTTCAGGATCTTGATTCCGTCATTCAGAGTTTCGCCGACGAGATCTCCCCTGTCTCCTCTCCGCCGCCGGTTCCGGCGGCCCCCGGCGAGTCCTTCCCGGAGCTCGGGTACCTTCTCCTGGCCTCCGACGACGAGCTTGGCCTCCCGCCGTCCGACGCCTCCACCAGCCACGGCGGTGAAGCCGAGGCGGCGGATCTGGCGCGGGCGTCGTCGGACTCGTCCGGGATCGGAGAGATTTGGGGATTTGAAGATGCGATTCCGAGTTACGAGTCGTTCGAGTTGGGGGAAGGAGGGAGATTTTACAACGATACGGAATATGTGGCGTTCGACGGACTGTTTGAACATTCCGATGTGTACTCCGTTTTCTCGTGA MEDLSSNKRLRVDSIDSESDSPEVKRLKDDLLGLLDDADPDPAVQDLDSVIQSFADEISPVSSPPPVPAAPGESFPELGYLLLASDDELGLPPSDASTSHGGEAEAADLARASSDSSGIGEIWGFEDAIPSYESFELGEGGRFYNDTEYVAFDGLFEHSDVYSVFS Homology
BLAST of Tan0006137 vs. NCBI nr
Match: XP_022938336.1 (uncharacterized protein LOC111444467 [Cucurbita moschata] >XP_022959152.1 uncharacterized protein LOC111460226 [Cucurbita moschata]) HSP 1 Score: 288.5 bits (737), Expect = 3.7e-74 Identity = 148/166 (89.16%), Postives = 158/166 (95.18%), Query Frame = 0
BLAST of Tan0006137 vs. NCBI nr
Match: KAG6601790.1 (hypothetical protein SDJN03_07023, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032506.1 hypothetical protein SDJN02_06555, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 288.5 bits (737), Expect = 3.7e-74 Identity = 148/166 (89.16%), Postives = 157/166 (94.58%), Query Frame = 0
BLAST of Tan0006137 vs. NCBI nr
Match: XP_023538923.1 (uncharacterized protein LOC111799678 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 287.7 bits (735), Expect = 6.3e-74 Identity = 149/166 (89.76%), Postives = 157/166 (94.58%), Query Frame = 0
BLAST of Tan0006137 vs. NCBI nr
Match: XP_022993320.1 (uncharacterized protein LOC111489362 [Cucurbita maxima]) HSP 1 Score: 286.2 bits (731), Expect = 1.8e-73 Identity = 149/166 (89.76%), Postives = 155/166 (93.37%), Query Frame = 0
BLAST of Tan0006137 vs. NCBI nr
Match: KAG7016709.1 (hypothetical protein SDJN02_21819, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 279.3 bits (713), Expect = 2.2e-71 Identity = 147/166 (88.55%), Postives = 155/166 (93.37%), Query Frame = 0
BLAST of Tan0006137 vs. ExPASy TrEMBL
Match: A0A6J1H3R7 (uncharacterized protein LOC111444467 OS=Cucurbita moschata OX=3662 GN=LOC111460226 PE=4 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 1.8e-74 Identity = 148/166 (89.16%), Postives = 158/166 (95.18%), Query Frame = 0
BLAST of Tan0006137 vs. ExPASy TrEMBL
Match: A0A6J1JY78 (uncharacterized protein LOC111489362 OS=Cucurbita maxima OX=3661 GN=LOC111489362 PE=4 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 8.8e-74 Identity = 149/166 (89.76%), Postives = 155/166 (93.37%), Query Frame = 0
BLAST of Tan0006137 vs. ExPASy TrEMBL
Match: A0A6J1FGC2 (uncharacterized protein LOC111445164 OS=Cucurbita moschata OX=3662 GN=LOC111445164 PE=4 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 7.2e-68 Identity = 144/166 (86.75%), Postives = 151/166 (90.96%), Query Frame = 0
BLAST of Tan0006137 vs. ExPASy TrEMBL
Match: A0A1S3BDY1 (uncharacterized protein LOC103488614 OS=Cucumis melo OX=3656 GN=LOC103488614 PE=4 SV=1) HSP 1 Score: 258.5 bits (659), Expect = 2.0e-65 Identity = 137/167 (82.04%), Postives = 148/167 (88.62%), Query Frame = 0
BLAST of Tan0006137 vs. ExPASy TrEMBL
Match: A0A0A0K873 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G038510 PE=4 SV=1) HSP 1 Score: 256.9 bits (655), Expect = 5.7e-65 Identity = 136/167 (81.44%), Postives = 148/167 (88.62%), Query Frame = 0
BLAST of Tan0006137 vs. TAIR 10
Match: AT1G13360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1); Has 69 Blast hits to 69 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 131.7 bits (330), Expect = 5.3e-31 Identity = 84/166 (50.60%), Postives = 108/166 (65.06%), Query Frame = 0
BLAST of Tan0006137 vs. TAIR 10
Match: AT1G13360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). ) HSP 1 Score: 125.2 bits (313), Expect = 5.0e-29 Identity = 80/165 (48.48%), Postives = 106/165 (64.24%), Query Frame = 0
BLAST of Tan0006137 vs. TAIR 10
Match: AT1G13360.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). ) HSP 1 Score: 125.2 bits (313), Expect = 5.0e-29 Identity = 83/166 (50.00%), Postives = 107/166 (64.46%), Query Frame = 0
BLAST of Tan0006137 vs. TAIR 10
Match: AT3G25870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13360.1); Has 50 Blast hits to 50 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 103.6 bits (257), Expect = 1.6e-22 Identity = 74/174 (42.53%), Postives = 100/174 (57.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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