Tan0006067 (gene) Snake gourd v1

Overview


Name	Tan0006067
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	ethylene-responsive transcription factor ERF003-like
Location	LG06: 3338953 .. 3339808 (-)
RNA-Seq Expression	Tan0006067
Synteny	Tan0006067

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCAATCTCTCCCTAATTTCTCTTTCATTTCCATCACCAACCAAAACTCAGACCTCTTCCACCATTGCAGCTCCTCTTCAAGCTTCTTCTTCTCCGACGACCTCTATGGCTCGACCTCAACAACGCTATCGCGGTGTTCGCCAACGACATTGGGGCTCTTGGGTCTCCGAAATTCGCCACCCTCTATTGTAATTCTCTACCTTTCATCTCTTTCTTTTATTTGACTCGTACGAATAGAGTCAGAAATTTTCATAGAAAAATATCAAAAAATTTCTATTCTAACCCTGAAATCTTTAATATACACAATTGAGTGAATAGTTCTCTCCTTCCCTCTTTAAAAATTTTCTAAATTTTTTCAGGAAGACGAGAATATGGTTAGGGACGTTCGAGACGGCGGAGGACGCAGCCCGAGCCTACGACGAGGCAGCACGACTGATGTGCGGTCCGAAAGCGAGAACCAACTTCCAATTCAATCCGAACGATCAACAATCATCTTTTTCTTCCTCTTCGTCGTCGTCGAAGCTTCTCTCCGCCGCGCTGATAGCGAAATTACACAAATGCCATTTAGCCTCTCTCCAAATCGCCAAAAAACACATTCACAAACAACACCCCGGATTCGACCCCAACTACGCCGCATACGGCGGAGGATCGCCGAGCATTACCGGAAGTACCACCGGCCAGTGGCCGTCGGAAGAAACATGGGTCTATTCTGACGAAGCACAAATGGAGATGAATAATAATAACAACAACAACAATATTCATCATCAGCAATGCCTTCAGCCTCTTGAAGATGATCACATTGAACAAATGATACAAGAGCTGCTAGACCTCGGATCACTCGAAATTATTACATAA

mRNA sequence

ATTCAATCTCTCCCTAATTTCTCTTTCATTTCCATCACCAACCAAAACTCAGACCTCTTCCACCATTGCAGCTCCTCTTCAAGCTTCTTCTTCTCCGACGACCTCTATGGCTCGACCTCAACAACGCTATCGCGGTGTTCGCCAACGACATTGGGGCTCTTGGGTCTCCGAAATTCGCCACCCTCTATTGAAGACGAGAATATGGTTAGGGACGTTCGAGACGGCGGAGGACGCAGCCCGAGCCTACGACGAGGCAGCACGACTGATGTGCGGTCCGAAAGCGAGAACCAACTTCCAATTCAATCCGAACGATCAACAATCATCTTTTTCTTCCTCTTCGTCGTCGTCGAAGCTTCTCTCCGCCGCGCTGATAGCGAAATTACACAAATGCCATTTAGCCTCTCTCCAAATCGCCAAAAAACACATTCACAAACAACACCCCGGATTCGACCCCAACTACGCCGCATACGGCGGAGGATCGCCGAGCATTACCGGAAGTACCACCGGCCAGTGGCCGTCGGAAGAAACATGGGTCTATTCTGACGAAGCACAAATGGAGATGAATAATAATAACAACAACAACAATATTCATCATCAGCAATGCCTTCAGCCTCTTGAAGATGATCACATTGAACAAATGATACAAGAGCTGCTAGACCTCGGATCACTCGAAATTATTACATAA

Coding sequence (CDS)

ATGGCTCGACCTCAACAACGCTATCGCGGTGTTCGCCAACGACATTGGGGCTCTTGGGTCTCCGAAATTCGCCACCCTCTATTGAAGACGAGAATATGGTTAGGGACGTTCGAGACGGCGGAGGACGCAGCCCGAGCCTACGACGAGGCAGCACGACTGATGTGCGGTCCGAAAGCGAGAACCAACTTCCAATTCAATCCGAACGATCAACAATCATCTTTTTCTTCCTCTTCGTCGTCGTCGAAGCTTCTCTCCGCCGCGCTGATAGCGAAATTACACAAATGCCATTTAGCCTCTCTCCAAATCGCCAAAAAACACATTCACAAACAACACCCCGGATTCGACCCCAACTACGCCGCATACGGCGGAGGATCGCCGAGCATTACCGGAAGTACCACCGGCCAGTGGCCGTCGGAAGAAACATGGGTCTATTCTGACGAAGCACAAATGGAGATGAATAATAATAACAACAACAACAATATTCATCATCAGCAATGCCTTCAGCCTCTTGAAGATGATCACATTGAACAAATGATACAAGAGCTGCTAGACCTCGGATCACTCGAAATTATTACATAA

Protein sequence

MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQFNPNDQQSSFSSSSSSSKLLSAALIAKLHKCHLASLQIAKKHIHKQHPGFDPNYAAYGGGSPSITGSTTGQWPSEETWVYSDEAQMEMNNNNNNNNIHHQQCLQPLEDDHIEQMIQELLDLGSLEIIT

Homology

[Close]

BLAST of Tan0006067 vs. ExPASy Swiss-Prot
Match: Q94AW5 (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=1 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 3.9e-46
Identity = 108/198 (54.55%), Postives = 131/198 (66.16%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQR+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGP+AR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFQFNPNDQQSSFSSSSSSSKLLSAALIAKLHKCHLASLQIAKKHIHKQHPGFDPNYAA 120
           TNF +NPN      +  +SSSKLLSA L AKLHKC++ASLQ+ K+   +       + +A
Sbjct: 61  TNFPYNPN------AIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQTQTARSQSA 120

Query: 121 YGGG--------SPSITGSTTGQWPSEETWVYSDEAQMEMNNNNNNNNIHHQQCLQPLED 180
              G        +  +T +T  +W                     + N + QQ  +PLE+
Sbjct: 121 DSDGVTANESHLNRGVTETTEIKW--------------------EDGNANMQQNFRPLEE 172

Query: 181 DHIEQMIQELLDLGSLEI 191
           DHIEQMI+ELL  GS+E+
Sbjct: 181 DHIEQMIEELLHYGSIEL 172

[Close]

BLAST of Tan0006067 vs. ExPASy Swiss-Prot
Match: P16146 (Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.4e-40
Identity = 97/179 (54.19%), Postives = 119/179 (66.48%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRG RQRHWGSWVSEIRH +LKTRIW GTFE+AEDAARAYDEAARLMCG +AR
Sbjct: 1   MARPQQRYRGFRQRHWGSWVSEIRHSILKTRIWQGTFESAEDAARAYDEAARLMCGTRAR 60

Query: 61  TNFQFNPNDQQSSFSSSSSSSKLLSAALIAKLHKCHLASLQIAKKHIHKQHPGF--DPNY 120
           TNF +NPN      +S SSSSKLLSA LIAKLH+C++ASLQ+ +     + P     PN 
Sbjct: 61  TNFPYNPN------ASQSSSSKLLSATLIAKLHRCYMASLQMTRPSSLPEAPRIIASPNN 120

Query: 121 AAYGGGSPSITGSTTGQWPSEETWVYSDEAQMEMNNNNNNNNIHHQQCLQPLEDDHIEQ 178
           A  G G+ ++      +   +ET    D  +++         +   Q  +PLE+DHI Q
Sbjct: 121 AVKGIGADAMLLPKKREQEEQETGGNLDFKKVK---------VECSQQFKPLEEDHIAQ 164

[Close]

BLAST of Tan0006067 vs. ExPASy Swiss-Prot
Match: Q9XI33 (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.0e-25
Identity = 64/101 (63.37%), Postives = 73/101 (72.28%), Query Frame = 0


Query: 6   QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQF 65
           +++RGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA LM G  A+TNF  
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66  NPND-----------QQSSFSSSSSSSKLLSAALIAKLHKC 96
           N N+             SS  SSS+SS  LS+ L AKL KC
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKC 105

[Close]

BLAST of Tan0006067 vs. ExPASy Swiss-Prot
Match: Q3E958 (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 9.6e-21
Identity = 55/91 (60.44%), Postives = 67/91 (73.63%), Query Frame = 0


Query: 6  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQF 65
          +++RGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA LM G  A+TNF  
Sbjct: 5  KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66 NPNDQQSSFSSSSS--SSKLLSAALIAKLHK 95
            ++  +S   +S+  S K LS  L AKL K
Sbjct: 65 IKSNGSNSLEINSALRSPKSLSELLNAKLRK 95

[Close]

BLAST of Tan0006067 vs. ExPASy Swiss-Prot
Match: Q9LFN7 (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.2e-18
Identity = 75/186 (40.32%), Postives = 92/186 (49.46%), Query Frame = 0


Query: 6   QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQF 65
           +++RGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA LM G  A+TNF  
Sbjct: 5   RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 66  ----NPNDQQSSFSSSSSSSKLLSAALIAKLHK-CH--LASLQIAKKHIHKQHPGFDPNY 125
                 +D     +S   S K LS  L AKL K C     SL   +      H G     
Sbjct: 65  VKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHIGVWQKR 124

Query: 126 AAYGGGSPSITGSTTGQWPSEETWVYSDEAQMEMNNNNNNNNIHHQQCLQPLEDDHIEQM 185
           A        +     G   +E      D     MN  N       ++ +   ED    +M
Sbjct: 125 AGSKTSPTWVMRLELGNVVNESA---VDLGLTTMNKQNVEKEEEEEEAIISDEDQLAMEM 184

[Close]

BLAST of Tan0006067 vs. NCBI nr
Match: XP_008461170.1 (PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis melo])

HSP 1 Score: 327.8 bits (839), Expect = 6.3e-86
Identity = 170/202 (84.16%), Postives = 181/202 (89.60%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFQFNPNDQQSSFS-SSSSSSKLLSAALIAKLHKCHLASLQIAKKHIHKQHPGFDPNYA 120
           TNF +N NDQQSS S SSSSSSKLLSAALI KLHKCHLASLQIAK+H+HKQHPGF+P+Y 
Sbjct: 61  TNFPYNLNDQQSSSSFSSSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHPGFEPSYL 120

Query: 121 AYGGG-SPSITGSTTGQWPSEETWVYSDEAQMEM-------NNNNNNNNIHHQQC-LQPL 180
           AYGG   PSITG+TT +W S+ETWVYSD+ Q+EM       NNNNNNNNIHHQQC L+PL
Sbjct: 121 AYGGSPPPSITGATTSRWTSDETWVYSDKGQLEMNNNNNNNNNNNNNNNIHHQQCQLEPL 180

Query: 181 EDDHIEQMIQELLDLGSLEIIT 193
           EDDHIEQMIQELLDLGS EIIT
Sbjct: 181 EDDHIEQMIQELLDLGSFEIIT 202

[Close]

BLAST of Tan0006067 vs. NCBI nr
Match: XP_011659507.1 (ethylene-responsive transcription factor ERF003 [Cucumis sativus] >KGN45227.1 hypothetical protein Csa_015978 [Cucumis sativus])

HSP 1 Score: 320.9 bits (821), Expect = 7.7e-84
Identity = 168/197 (85.28%), Postives = 178/197 (90.36%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFQFNPNDQQSSFSSSSSSSKLLSAALIAKLHKCHLASLQIAKKHIHKQHPGFDPNYAA 120
           TNF +NPNDQQSS SS SSSSKLLSAALI KLHKCHLASLQIAK+H+HKQH GF+P+Y A
Sbjct: 61  TNFPYNPNDQQSS-SSFSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHAGFEPSYLA 120

Query: 121 YGGGSPS-ITGSTTGQWPSEETWVYSDEA-QMEMNNNNN--NNNIHHQQC-LQPLEDDHI 180
           Y G  P  ITG+TT QW S+ETWVYS++  QMEMNNNNN  NNNIHHQQC L+PLEDDHI
Sbjct: 121 YSGSPPPIITGATTSQWASDETWVYSNKGDQMEMNNNNNNYNNNIHHQQCQLEPLEDDHI 180

Query: 181 EQMIQELLDLGSLEIIT 193
           EQMIQELLDLGS EIIT
Sbjct: 181 EQMIQELLDLGSFEIIT 196

[Close]

BLAST of Tan0006067 vs. NCBI nr
Match: XP_023513557.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 313.9 bits (803), Expect = 9.4e-82
Identity = 164/192 (85.42%), Postives = 168/192 (87.50%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFQFNPNDQQSSFSSSSSSSKLLSAALIAKLHKCHLASLQIAKKHIHKQHPGFDPNYAA 120
           TNFQ N NDQ     S SSSS LLS ALIAKLHKCHLASLQIAKKHIHKQHPGFDPN   
Sbjct: 61  TNFQLNLNDQ----PSFSSSSNLLSPALIAKLHKCHLASLQIAKKHIHKQHPGFDPN--- 120

Query: 121 YGGGSPSITGSTTGQWPSEETWVYSDEAQMEMNNNNNNNNIHHQQCLQPLEDDHIEQMIQ 180
            GG  PSI+ +TTG WP EETWVYSDEAQME+  NNN+NNIH QQCLQPLEDDHIEQMIQ
Sbjct: 121 -GGPPPSISRTTTGPWPPEETWVYSDEAQMEI--NNNDNNIHRQQCLQPLEDDHIEQMIQ 180

Query: 181 ELLDLGSLEIIT 193
           ELLDLG  EIIT
Sbjct: 181 ELLDLGPFEIIT 182

[Close]

BLAST of Tan0006067 vs. NCBI nr
Match: XP_022959765.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita moschata])

HSP 1 Score: 313.5 bits (802), Expect = 1.2e-81
Identity = 164/192 (85.42%), Postives = 168/192 (87.50%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFQFNPNDQQSSFSSSSSSSKLLSAALIAKLHKCHLASLQIAKKHIHKQHPGFDPNYAA 120
           TNFQ N NDQ     S SSSS LLS ALIAKLHKCHLASLQI KKHIHKQHPGFD N   
Sbjct: 61  TNFQLNLNDQ----PSFSSSSNLLSPALIAKLHKCHLASLQITKKHIHKQHPGFDLN--- 120

Query: 121 YGGGSPSITGSTTGQWPSEETWVYSDEAQMEMNNNNNNNNIHHQQCLQPLEDDHIEQMIQ 180
            GG  PSI+ +TTGQWP EETWVYSDEAQME+ NNN+NNNIHHQ CLQPLEDDHIEQMIQ
Sbjct: 121 -GGPPPSISRTTTGQWPPEETWVYSDEAQMEI-NNNDNNNIHHQPCLQPLEDDHIEQMIQ 180

Query: 181 ELLDLGSLEIIT 193
           ELLDLG  EIIT
Sbjct: 181 ELLDLGPFEIIT 183

[Close]

BLAST of Tan0006067 vs. NCBI nr
Match: XP_038899890.1 (ethylene-responsive transcription factor ERF003-like [Benincasa hispida])

HSP 1 Score: 313.2 bits (801), Expect = 1.6e-81
Identity = 165/194 (85.05%), Postives = 168/194 (86.60%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGP AR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPNAR 60

Query: 61  TNFQFNPNDQQSSFSSSSSSSKLLSAALIAKLHKCHLASLQIAKKHIHKQHP-GFDPNYA 120
           TNFQ+NPNDQ     SSSSSS LLSAALIAKLHKCHLASLQIAKKHIHKQHP GF P   
Sbjct: 61  TNFQYNPNDQH----SSSSSSNLLSAALIAKLHKCHLASLQIAKKHIHKQHPAGFQP--- 120

Query: 121 AYGGGSPSITGSTTG-QWPSEETWVYSDEAQMEMNNNNNNNNIHHQQCLQPLEDDHIEQM 180
                 PSI G TTG +W  EETWVYSDE QMEMN+NNNNNNIHHQQCLQPLEDDHIEQM
Sbjct: 121 ----PPPSIAGPTTGRRWTPEETWVYSDEGQMEMNDNNNNNNIHHQQCLQPLEDDHIEQM 180

Query: 181 IQELLDLGSLEIIT 193
           IQELL LGS EIIT
Sbjct: 181 IQELLHLGSFEIIT 183

[Close]

BLAST of Tan0006067 vs. ExPASy TrEMBL
Match: A0A1S3CE50 (ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=LOC103499832 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 3.1e-86
Identity = 170/202 (84.16%), Postives = 181/202 (89.60%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFQFNPNDQQSSFS-SSSSSSKLLSAALIAKLHKCHLASLQIAKKHIHKQHPGFDPNYA 120
           TNF +N NDQQSS S SSSSSSKLLSAALI KLHKCHLASLQIAK+H+HKQHPGF+P+Y 
Sbjct: 61  TNFPYNLNDQQSSSSFSSSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHPGFEPSYL 120

Query: 121 AYGGG-SPSITGSTTGQWPSEETWVYSDEAQMEM-------NNNNNNNNIHHQQC-LQPL 180
           AYGG   PSITG+TT +W S+ETWVYSD+ Q+EM       NNNNNNNNIHHQQC L+PL
Sbjct: 121 AYGGSPPPSITGATTSRWTSDETWVYSDKGQLEMNNNNNNNNNNNNNNNIHHQQCQLEPL 180

Query: 181 EDDHIEQMIQELLDLGSLEIIT 193
           EDDHIEQMIQELLDLGS EIIT
Sbjct: 181 EDDHIEQMIQELLDLGSFEIIT 202

[Close]

BLAST of Tan0006067 vs. ExPASy TrEMBL
Match: A0A0A0KA12 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G432080 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.7e-84
Identity = 168/197 (85.28%), Postives = 178/197 (90.36%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFQFNPNDQQSSFSSSSSSSKLLSAALIAKLHKCHLASLQIAKKHIHKQHPGFDPNYAA 120
           TNF +NPNDQQSS SS SSSSKLLSAALI KLHKCHLASLQIAK+H+HKQH GF+P+Y A
Sbjct: 61  TNFPYNPNDQQSS-SSFSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHAGFEPSYLA 120

Query: 121 YGGGSPS-ITGSTTGQWPSEETWVYSDEA-QMEMNNNNN--NNNIHHQQC-LQPLEDDHI 180
           Y G  P  ITG+TT QW S+ETWVYS++  QMEMNNNNN  NNNIHHQQC L+PLEDDHI
Sbjct: 121 YSGSPPPIITGATTSQWASDETWVYSNKGDQMEMNNNNNNYNNNIHHQQCQLEPLEDDHI 180

Query: 181 EQMIQELLDLGSLEIIT 193
           EQMIQELLDLGS EIIT
Sbjct: 181 EQMIQELLDLGSFEIIT 196

[Close]

BLAST of Tan0006067 vs. ExPASy TrEMBL
Match: A0A6J1H793 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=3662 GN=LOC111460738 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 6.0e-82
Identity = 164/192 (85.42%), Postives = 168/192 (87.50%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFQFNPNDQQSSFSSSSSSSKLLSAALIAKLHKCHLASLQIAKKHIHKQHPGFDPNYAA 120
           TNFQ N NDQ     S SSSS LLS ALIAKLHKCHLASLQI KKHIHKQHPGFD N   
Sbjct: 61  TNFQLNLNDQ----PSFSSSSNLLSPALIAKLHKCHLASLQITKKHIHKQHPGFDLN--- 120

Query: 121 YGGGSPSITGSTTGQWPSEETWVYSDEAQMEMNNNNNNNNIHHQQCLQPLEDDHIEQMIQ 180
            GG  PSI+ +TTGQWP EETWVYSDEAQME+ NNN+NNNIHHQ CLQPLEDDHIEQMIQ
Sbjct: 121 -GGPPPSISRTTTGQWPPEETWVYSDEAQMEI-NNNDNNNIHHQPCLQPLEDDHIEQMIQ 180

Query: 181 ELLDLGSLEIIT 193
           ELLDLG  EIIT
Sbjct: 181 ELLDLGPFEIIT 183

[Close]

BLAST of Tan0006067 vs. ExPASy TrEMBL
Match: A0A6J1KW57 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661 GN=LOC111497726 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.5e-80
Identity = 161/192 (83.85%), Postives = 166/192 (86.46%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQ+YRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQQYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFQFNPNDQQSSFSSSSSSSKLLSAALIAKLHKCHLASLQIAKKHIHKQHPGFDPNYAA 120
           TNFQ N NDQ     S SSSS LLS ALIAKLHKCHLASLQIAKKHIHKQHPGFDPN   
Sbjct: 61  TNFQLNLNDQ----PSFSSSSNLLSPALIAKLHKCHLASLQIAKKHIHKQHPGFDPN--- 120

Query: 121 YGGGSPSITGSTTGQWPSEETWVYSDEAQMEMNNNNNNNNIHHQQCLQPLEDDHIEQMIQ 180
            GG  PSI+ +TTGQWP EETWVYSDEAQM++     NNNIHHQ CLQPLEDDHIEQMIQ
Sbjct: 121 -GGPPPSISRTTTGQWPPEETWVYSDEAQMKI-----NNNIHHQPCLQPLEDDHIEQMIQ 179

Query: 181 ELLDLGSLEIIT 193
           ELLDLG  EIIT
Sbjct: 181 ELLDLGPFEIIT 179

[Close]

BLAST of Tan0006067 vs. ExPASy TrEMBL
Match: A0A6J1GPQ0 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=3662 GN=LOC111456403 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.5e-80
Identity = 162/193 (83.94%), Postives = 170/193 (88.08%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFQFNPNDQQSSFSSSSSSSKLLSAALIAKLHKCHLASLQIAKKH-IHKQHPGFDPNYA 120
           TNFQFNPNDQQSS SSSSSSSKLLSA L+AKLHKCHLASLQIAKKH  HKQHPGF+PNYA
Sbjct: 61  TNFQFNPNDQQSS-SSSSSSSKLLSAPLMAKLHKCHLASLQIAKKHAAHKQHPGFEPNYA 120

Query: 121 AYGGGSPSITGSTTGQWPSEETWVYSDEAQMEMNNNNNNNNIHHQQCLQPLEDDHIEQMI 180
            YGG SPSI+ +TT +W  EET         ++  NN+NNNIHHQQCLQPLEDD IEQMI
Sbjct: 121 VYGGPSPSISQTTTHRWRQEET---------QIETNNDNNNIHHQQCLQPLEDDDIEQMI 180

Query: 181 QELLDLGSLEIIT 193
           QELLDLGS EIIT
Sbjct: 181 QELLDLGSFEIIT 183

[Close]

BLAST of Tan0006067 vs. TAIR 10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 186.0 bits (471), Expect = 2.8e-47
Identity = 108/198 (54.55%), Postives = 131/198 (66.16%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQR+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGP+AR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFQFNPNDQQSSFSSSSSSSKLLSAALIAKLHKCHLASLQIAKKHIHKQHPGFDPNYAA 120
           TNF +NPN      +  +SSSKLLSA L AKLHKC++ASLQ+ K+   +       + +A
Sbjct: 61  TNFPYNPN------AIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQTQTARSQSA 120

Query: 121 YGGG--------SPSITGSTTGQWPSEETWVYSDEAQMEMNNNNNNNNIHHQQCLQPLED 180
              G        +  +T +T  +W                     + N + QQ  +PLE+
Sbjct: 121 DSDGVTANESHLNRGVTETTEIKW--------------------EDGNANMQQNFRPLEE 172

Query: 181 DHIEQMIQELLDLGSLEI 191
           DHIEQMI+ELL  GS+E+
Sbjct: 181 DHIEQMIEELLHYGSIEL 172

[Close]

BLAST of Tan0006067 vs. TAIR 10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 118.2 bits (295), Expect = 7.1e-27
Identity = 64/101 (63.37%), Postives = 73/101 (72.28%), Query Frame = 0


Query: 6   QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQF 65
           +++RGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA LM G  A+TNF  
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66  NPND-----------QQSSFSSSSSSSKLLSAALIAKLHKC 96
           N N+             SS  SSS+SS  LS+ L AKL KC
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKC 105

[Close]

BLAST of Tan0006067 vs. TAIR 10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 101.7 bits (252), Expect = 6.9e-22
Identity = 55/91 (60.44%), Postives = 67/91 (73.63%), Query Frame = 0


Query: 6  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQF 65
          +++RGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA LM G  A+TNF  
Sbjct: 5  KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66 NPNDQQSSFSSSSS--SSKLLSAALIAKLHK 95
            ++  +S   +S+  S K LS  L AKL K
Sbjct: 65 IKSNGSNSLEINSALRSPKSLSELLNAKLRK 95

[Close]

BLAST of Tan0006067 vs. TAIR 10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 94.7 bits (234), Expect = 8.4e-20
Identity = 75/186 (40.32%), Postives = 92/186 (49.46%), Query Frame = 0


Query: 6   QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQF 65
           +++RGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA LM G  A+TNF  
Sbjct: 5   RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 66  ----NPNDQQSSFSSSSSSSKLLSAALIAKLHK-CH--LASLQIAKKHIHKQHPGFDPNY 125
                 +D     +S   S K LS  L AKL K C     SL   +      H G     
Sbjct: 65  VKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHIGVWQKR 124

Query: 126 AAYGGGSPSITGSTTGQWPSEETWVYSDEAQMEMNNNNNNNNIHHQQCLQPLEDDHIEQM 185
           A        +     G   +E      D     MN  N       ++ +   ED    +M
Sbjct: 125 AGSKTSPTWVMRLELGNVVNESA---VDLGLTTMNKQNVEKEEEEEEAIISDEDQLAMEM 184

[Close]

BLAST of Tan0006067 vs. TAIR 10
Match: AT5G25390.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 92.8 bits (229), Expect = 3.2e-19
Identity = 53/91 (58.24%), Postives = 65/91 (71.43%), Query Frame = 0


Query: 6  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQF 65
          +++RGVRQR WGSWVSEIRHPLL   +WLGTF+TAE AARAYD+AA LM G  A+TNF  
Sbjct: 5  KKFRGVRQRQWGSWVSEIRHPLL---VWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66 NPNDQQSSFSSSSS--SSKLLSAALIAKLHK 95
            ++  +S   +S+  S K LS  L AKL K
Sbjct: 65 IKSNGSNSLEINSALRSPKSLSELLNAKLRK 92

The following BLAST results are available for this feature:

BLAST of Tan0006067 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AW5	3.9e-46	54.55	Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 ...	[more]
P16146	1.4e-40	54.19	Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1	[more]
Q9XI33	1.0e-25	63.37	Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q3E958	9.6e-21	60.44	Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q9LFN7	1.2e-18	40.32	Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of Tan0006067 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008461170.1	6.3e-86	84.16	PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis melo]	[more]
XP_011659507.1	7.7e-84	85.28	ethylene-responsive transcription factor ERF003 [Cucumis sativus] >KGN45227.1 hy...	[more]
XP_023513557.1	9.4e-82	85.42	ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo...	[more]
XP_022959765.1	1.2e-81	85.42	ethylene-responsive transcription factor ERF003-like [Cucurbita moschata]	[more]
XP_038899890.1	1.6e-81	85.05	ethylene-responsive transcription factor ERF003-like [Benincasa hispida]	[more]

BLAST of Tan0006067 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CE50	3.1e-86	84.16	ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A0A0KA12	3.7e-84	85.28	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G432080 PE=...	[more]
A0A6J1H793	6.0e-82	85.42	ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1KW57	1.5e-80	83.85	ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1GPQ0	1.5e-80	83.94	ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=36...	[more]

BLAST of Tan0006067 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25190.1	2.8e-47	54.55	Integrase-type DNA-binding superfamily protein	[more]
AT1G15360.1	7.1e-27	63.37	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.2	6.9e-22	60.44	Integrase-type DNA-binding superfamily protein	[more]
AT5G11190.1	8.4e-20	40.32	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.1	3.2e-19	58.24	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 30..46 score: 70.91 coord: 8..19 score: 66.97
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 7..70 e-value: 3.4E-41 score: 152.9
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 7..56 e-value: 8.0E-12 score: 45.2
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 7..64 score: 20.73171
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 6..64 e-value: 1.46975E-34 score: 114.676
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 6..65 e-value: 5.2E-26 score: 92.6
None	No IPR available	PANTHER	PTHR31194:SF48	ETHYLENE RESPONSE FACTOR	coord: 1..191
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 1..191
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 7..65

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0006067.1	Tan0006067.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity