Tan0006054 (gene) Snake gourd v1

Overview


Name	Tan0006054
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	HR-like lesion-inducing protein-related
Location	LG10: 5825591 .. 5828277 (+)
RNA-Seq Expression	Tan0006054
Synteny	Tan0006054

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAAATTTGAATTTGACCTACTGGGGTGGTTGTGCGTTGTATTTCAGAATTTACTCACTGGAAATTTCCATTCTGTGGGTCTCCCATTTATAAAGCACAGCTAGCCGAAATTTCATCATTTAGTCGGAGGCGAAGAAGTTGCCGATCATAACCGGGGCGAGATTAGCTTTCTCTATTCTTGAACCTCGGACCTGCAACAAGAAACATGGGGTTCTTCTCCTTCCTTGGACGGGTCCTATTTGCCTCCATCTTCATCCTCTCCGCCTGGCAAATGTAAGTTTTCTTTATATTCTCACTCTCAATATTCAGATTTGCCGGATCTTTAAACAATCGATTGCAATCTATATGTTTCTTCTGTTTTGAATCTTTTATTGTTCTTGGCCTTTATTGCTTTCATTTCCGAAATGGGTCTTGGGGTTTTTTATGTTTCCTTTTTTCTTTAATTGTCGGTCCTTGTAAATGCTGCTTAGTGATTGCATTGCCGTTGTGTTTCGTTATGGAATATGCCTGGCTAAACTTTCTTCATATAACTTGCGCGCAAGTACTTCTAATGGGCTAGATTTATTACGGCGCCATTCAATTAGCCCTTCGATCAGTTTGCGATGGGTTCGTGTTTAAGAATGATTTTTTTTTAGGAAAAAGAACGATTTCTATATTGTGCATTTCTTATTGACATGGAGATTAAGGACCACTTTGTATCTGAAAATTTCATTCTCTGGTATTGGTTGAAAGTGAGAAGCCATTTTTGCTATCAGTGAGATTTTACTTAATTTCACGCGATGGCTTTGATATGAAGAAGGTCATACTTATAGGTACATTTATTTCTGTAGGGGATTAGGTATCAGTTTTATCCTTCAAAACTGAATGAACTATGTTAAGTGAGAGAATAGAGGACATATTGCATCGAAGATCTCCAATTTTACAATTTGATATTTCAAGTAATTAGTTATCTCTTCTTCTGCTGGTCATAATTTGAGGATTAACTTTTTCTTTAGCTAATTTTGTAGACATTTATTTCAATTTTATAGTAATAAACTGGACATTTGATATTGGGCAGAAGTGTGGAAGAAATAAGCTAGTTGGATCCTGATCAATAGGTGGAGTTAAACCCCTATGGGTTGGTTTAATGGTCAATACGAGCCAATATAAAAATAATAAAGGCCTTAGGAATGGGTTCAAGCCAGGCGGTTTCCACATAGGATTTACCTATGACCATGAGTTTCTTTAGACCAATGAGGTTCTGGTCTGCCTCGTACCTCCACCTTCCTATCATTTTTTTTTCGTACTTTCAACCATTTGGGTTTCTCATCTAAATGTCAAGGAAACAGTTTTATCACTTGAGGGCTACACCATTCTCCGTTTATAAAATACATGCATGAATATCTCGAGCAAGATGCTTTGTTTACCGAGAATTCTCTTATTTTGGTATTGACTTTACATACATCCTTTGGTTAGGTTTAATGAGTTTGGCAATAATGGTGGGCCGGCAGCTGCAGAATTGTCTCCAAAGGTAGCTGTTTTAAGGAGAAATTTATCATCCAAGTTGGGGGTAGCGATACCTGATATTGATGTAAGACCATATATTTTTAACCACAACTTTGTCTGCCGTTCTCTTCTTATTCACCACTTCAGTGTTGACAATATGAGTATGCTGTAACTTTTCCTTTTCAAACTCTGATAATTTTCTGCAGATCAGACACTTGGTTGCCATTTCTTTATCTCTTAAAGGAATTGGAGGCCTTCTGTTTGTTTTTGGCAGCAGCGTTGGAGCTTATCTCCTGGTAAGGATTCACCATGTTCTTAAGTTTTGCCTCTTTGTTTCCGATATTTTTATATTGGTAGTCAGTGTTACTCTAAACTTGTGCACGTCTTTAAAGAATATATTGCCTTCTCTTTCAGCTTCTGCAATTGGCTATTATCACTCCGGTTCTATATGACTTCTTCAACTATAGCCCCCAGAAGCCTTCTTTCGGTATCCTGCTAAGTGATTTCTTGCAGGTTTGTCCATGTGCTTTCTAACTTTTTTTTCCCCATGGTTTCATTTTAATCATTTCAATTTACTTATTTGATTAGAAAACTTATGGAATCCTATTTTTCTTGGCAGCACATTGCACTTTTTGGTGCTCTGCTTTTCTTCTTAGGGATGAAGAGCACAGTTCCAAAGAGGCAACCAAAAAAGAAGGCTGCTAAAACAAAAACGTATTAGATTTGTCAAAGAATCAACAGTTGGCAATCGGATTAATTTGCTCTGGCATTCAGTTCTTAGGTTTACACATTTTCACCATTGATGCAAACAACTTATTTACTTCTCTCGTAGTTAGTTGGCTGTTTTCTTTTTCCTCGGATTTACTTCGCTTCATCATTGTCTTCTGATGAGTTATTATTCAAGTTGAACTGCGGCATATAGGTCTTTATACTTGTGCTCCGGAGAAAAGAATTGGACTTTCAATTTTTTGAATTAAGTTGGAGCATCTTCTGGTTCCCTCTTTTGATGTGTTTTTTTTCCCCTTTAGTTCAGCAATTGTAGACTGGGGTCGAACCACGGACCTGGTAATAGGTGTTTTATTCCTTAAACTATGCTCGAATCGAATTGACTTAATATGTGTATACAGGCTCAGATTTCATAACATTTAAACCGAGAGTTCTTGTCACCTCAAGGTCCTCAAATCAAGTTTTCTTTACGGTGG

mRNA sequence

TCAAATTTGAATTTGACCTACTGGGGTGGTTGTGCGTTGTATTTCAGAATTTACTCACTGGAAATTTCCATTCTGTGGGTCTCCCATTTATAAAGCACAGCTAGCCGAAATTTCATCATTTAGTCGGAGGCGAAGAAGTTGCCGATCATAACCGGGGCGAGATTAGCTTTCTCTATTCTTGAACCTCGGACCTGCAACAAGAAACATGGGGTTCTTCTCCTTCCTTGGACGGGTCCTATTTGCCTCCATCTTCATCCTCTCCGCCTGGCAAATGTTTAATGAGTTTGGCAATAATGGTGGGCCGGCAGCTGCAGAATTGTCTCCAAAGGTAGCTGTTTTAAGGAGAAATTTATCATCCAAGTTGGGGGTAGCGATACCTGATATTGATATCAGACACTTGGTTGCCATTTCTTTATCTCTTAAAGGAATTGGAGGCCTTCTGTTTGTTTTTGGCAGCAGCGTTGGAGCTTATCTCCTGCTTCTGCAATTGGCTATTATCACTCCGGTTCTATATGACTTCTTCAACTATAGCCCCCAGAAGCCTTCTTTCGGTATCCTGCTAAGTGATTTCTTGCAGCACATTGCACTTTTTGGTGCTCTGCTTTTCTTCTTAGGGATGAAGAGCACAGTTCCAAAGAGGCAACCAAAAAAGAAGGCTGCTAAAACAAAAACGTATTAGATTTGTCAAAGAATCAACAGTTGGCAATCGGATTAATTTGCTCTGGCATTCAGTTCTTAGGTTTACACATTTTCACCATTGATGCAAACAACTTATTTACTTCTCTCGTAGTTAGTTGGCTGTTTTCTTTTTCCTCGGATTTACTTCGCTTCATCATTGTCTTCTGATGAGTTATTATTCAAGTTGAACTGCGGCATATAGGTCTTTATACTTGTGCTCCGGAGAAAAGAATTGGACTTTCAATTTTTTGAATTAAGTTGGAGCATCTTCTGGTTCCCTCTTTTGATGTGTTTTTTTTCCCCTTTAGTTCAGCAATTGTAGACTGGGGTCGAACCACGGACCTGGTAATAGGTGTTTTATTCCTTAAACTATGCTCGAATCGAATTGACTTAATATGTGTATACAGGCTCAGATTTCATAACATTTAAACCGAGAGTTCTTGTCACCTCAAGGTCCTCAAATCAAGTTTTCTTTACGGTGG

Coding sequence (CDS)

ATGGGGTTCTTCTCCTTCCTTGGACGGGTCCTATTTGCCTCCATCTTCATCCTCTCCGCCTGGCAAATGTTTAATGAGTTTGGCAATAATGGTGGGCCGGCAGCTGCAGAATTGTCTCCAAAGGTAGCTGTTTTAAGGAGAAATTTATCATCCAAGTTGGGGGTAGCGATACCTGATATTGATATCAGACACTTGGTTGCCATTTCTTTATCTCTTAAAGGAATTGGAGGCCTTCTGTTTGTTTTTGGCAGCAGCGTTGGAGCTTATCTCCTGCTTCTGCAATTGGCTATTATCACTCCGGTTCTATATGACTTCTTCAACTATAGCCCCCAGAAGCCTTCTTTCGGTATCCTGCTAAGTGATTTCTTGCAGCACATTGCACTTTTTGGTGCTCTGCTTTTCTTCTTAGGGATGAAGAGCACAGTTCCAAAGAGGCAACCAAAAAAGAAGGCTGCTAAAACAAAAACGTATTAG

Protein sequence

MGFFSFLGRVLFASIFILSAWQMFNEFGNNGGPAAAELSPKVAVLRRNLSSKLGVAIPDIDIRHLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFNYSPQKPSFGILLSDFLQHIALFGALLFFLGMKSTVPKRQPKKKAAKTKTY

Homology

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BLAST of Tan0006054 vs. NCBI nr
Match: KAG6597378.1 (hypothetical protein SDJN03_10558, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 283.9 bits (725), Expect = 8.5e-73
Identity = 148/157 (94.27%), Postives = 151/157 (96.18%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASIFILSAWQMFNEFGNNGGPAAAELSPKVAVLRRNLSSKLGVAIPDI 60
           MGFFSFLGRVLFASIFILSAWQMFNEF NNGG AAAELSPKVAVLRRNLSSKLGVAIPDI
Sbjct: 1   MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAAELSPKVAVLRRNLSSKLGVAIPDI 60

Query: 61  DIRHLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFNYSPQKPSFGILLS 120
           D+ HLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFN+SPQ P FGILLS
Sbjct: 61  DVTHLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFNFSPQNPFFGILLS 120

Query: 121 DFLQHIALFGALLFFLGMKSTVPKRQPKKKAAKTKTY 158
           DFLQHIALFGALLFFLGMK+TVPKRQPKKKA KTKTY
Sbjct: 121 DFLQHIALFGALLFFLGMKNTVPKRQPKKKAPKTKTY 157

[Close]

BLAST of Tan0006054 vs. NCBI nr
Match: XP_023538935.1 (uncharacterized protein LOC111799718 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 282.7 bits (722), Expect = 1.9e-72
Identity = 148/157 (94.27%), Postives = 150/157 (95.54%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASIFILSAWQMFNEFGNNGGPAAAELSPKVAVLRRNLSSKLGVAIPDI 60
           MGFFSFLGRVLFASIFILSAWQMFNEF NNGG AAAELSPKVAVLRRNLSSKLGVAIPDI
Sbjct: 1   MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAAELSPKVAVLRRNLSSKLGVAIPDI 60

Query: 61  DIRHLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFNYSPQKPSFGILLS 120
           D+ HLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFN SPQKP FGILL 
Sbjct: 61  DVTHLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFNISPQKPFFGILLG 120

Query: 121 DFLQHIALFGALLFFLGMKSTVPKRQPKKKAAKTKTY 158
           DFLQHIALFGALLFFLGMK+TVPKRQPKKKA KTKTY
Sbjct: 121 DFLQHIALFGALLFFLGMKNTVPKRQPKKKAPKTKTY 157

[Close]

BLAST of Tan0006054 vs. NCBI nr
Match: XP_022942464.1 (uncharacterized protein LOC111447492 [Cucurbita moschata])

HSP 1 Score: 280.8 bits (717), Expect = 7.2e-72
Identity = 147/157 (93.63%), Postives = 150/157 (95.54%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASIFILSAWQMFNEFGNNGGPAAAELSPKVAVLRRNLSSKLGVAIPDI 60
           MGFFSFLGRVLFASIFILSAWQMFNEF NNGG AAAELSPKVAVLRRNLSSKLGVAIPDI
Sbjct: 1   MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAAELSPKVAVLRRNLSSKLGVAIPDI 60

Query: 61  DIRHLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFNYSPQKPSFGILLS 120
           D+ HLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFN+SPQ P FGILLS
Sbjct: 61  DVTHLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFNFSPQNPFFGILLS 120

Query: 121 DFLQHIALFGALLFFLGMKSTVPKRQPKKKAAKTKTY 158
           DFLQHIALFGALLFFL MK+TVPKRQPKKKA KTKTY
Sbjct: 121 DFLQHIALFGALLFFLEMKNTVPKRQPKKKAPKTKTY 157

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BLAST of Tan0006054 vs. NCBI nr
Match: XP_022975056.1 (uncharacterized protein LOC111474025 [Cucurbita maxima])

HSP 1 Score: 277.7 bits (709), Expect = 6.1e-71
Identity = 146/157 (92.99%), Postives = 149/157 (94.90%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASIFILSAWQMFNEFGNNGGPAAAELSPKVAVLRRNLSSKLGVAIPDI 60
           MGFFSFLGRVLFASIFILSAWQMFNEF NNGG AAA LSPKVAVLRRNLSSKLGVAIPDI
Sbjct: 1   MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAAVLSPKVAVLRRNLSSKLGVAIPDI 60

Query: 61  DIRHLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFNYSPQKPSFGILLS 120
           D+ HLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFN+S QKP FGILL 
Sbjct: 61  DVTHLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFNFSLQKPFFGILLG 120

Query: 121 DFLQHIALFGALLFFLGMKSTVPKRQPKKKAAKTKTY 158
           DFLQHIALFGALLFFLGMK+TVPKRQPKKKA KTKTY
Sbjct: 121 DFLQHIALFGALLFFLGMKNTVPKRQPKKKAPKTKTY 157

[Close]

BLAST of Tan0006054 vs. NCBI nr
Match: XP_022924237.1 (uncharacterized protein LOC111431764 [Cucurbita moschata])

HSP 1 Score: 263.8 bits (673), Expect = 9.2e-67
Identity = 140/158 (88.61%), Postives = 148/158 (93.67%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASIFILSAWQMFNEFGNNGGPAAAELSPKVAVLRRNLSSKLGVAIPDI 60
           M FFSFLGRVLFASIFILSAWQMFNEFG+NGGPAAAELS KVAVLRRNLSSKLGVAIP+I
Sbjct: 1   MRFFSFLGRVLFASIFILSAWQMFNEFGHNGGPAAAELSLKVAVLRRNLSSKLGVAIPEI 60

Query: 61  DIRHLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFNYSPQKPSFGILL- 120
           D+RHLVAISLSLKGIGGLLFVFGS VGAYLLLLQLAIITPVLYDFFNYSPQKP F ILL 
Sbjct: 61  DVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLF 120

Query: 121 SDFLQHIALFGALLFFLGMKSTVPKRQPKKKAAKTKTY 158
           SDFLQHIALFGAL+FFLGMK+T P++  KKK +KTKTY
Sbjct: 121 SDFLQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY 158

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BLAST of Tan0006054 vs. ExPASy TrEMBL
Match: A0A6J1FRE6 (uncharacterized protein LOC111447492 OS=Cucurbita moschata OX=3662 GN=LOC111447492 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 3.5e-72
Identity = 147/157 (93.63%), Postives = 150/157 (95.54%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASIFILSAWQMFNEFGNNGGPAAAELSPKVAVLRRNLSSKLGVAIPDI 60
           MGFFSFLGRVLFASIFILSAWQMFNEF NNGG AAAELSPKVAVLRRNLSSKLGVAIPDI
Sbjct: 1   MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAAELSPKVAVLRRNLSSKLGVAIPDI 60

Query: 61  DIRHLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFNYSPQKPSFGILLS 120
           D+ HLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFN+SPQ P FGILLS
Sbjct: 61  DVTHLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFNFSPQNPFFGILLS 120

Query: 121 DFLQHIALFGALLFFLGMKSTVPKRQPKKKAAKTKTY 158
           DFLQHIALFGALLFFL MK+TVPKRQPKKKA KTKTY
Sbjct: 121 DFLQHIALFGALLFFLEMKNTVPKRQPKKKAPKTKTY 157

[Close]

BLAST of Tan0006054 vs. ExPASy TrEMBL
Match: A0A6J1ID53 (uncharacterized protein LOC111474025 OS=Cucurbita maxima OX=3661 GN=LOC111474025 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 3.0e-71
Identity = 146/157 (92.99%), Postives = 149/157 (94.90%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASIFILSAWQMFNEFGNNGGPAAAELSPKVAVLRRNLSSKLGVAIPDI 60
           MGFFSFLGRVLFASIFILSAWQMFNEF NNGG AAA LSPKVAVLRRNLSSKLGVAIPDI
Sbjct: 1   MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAAVLSPKVAVLRRNLSSKLGVAIPDI 60

Query: 61  DIRHLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFNYSPQKPSFGILLS 120
           D+ HLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFN+S QKP FGILL 
Sbjct: 61  DVTHLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFNFSLQKPFFGILLG 120

Query: 121 DFLQHIALFGALLFFLGMKSTVPKRQPKKKAAKTKTY 158
           DFLQHIALFGALLFFLGMK+TVPKRQPKKKA KTKTY
Sbjct: 121 DFLQHIALFGALLFFLGMKNTVPKRQPKKKAPKTKTY 157

[Close]

BLAST of Tan0006054 vs. ExPASy TrEMBL
Match: A0A6J1E8C2 (uncharacterized protein LOC111431764 OS=Cucurbita moschata OX=3662 GN=LOC111431764 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 4.4e-67
Identity = 140/158 (88.61%), Postives = 148/158 (93.67%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASIFILSAWQMFNEFGNNGGPAAAELSPKVAVLRRNLSSKLGVAIPDI 60
           M FFSFLGRVLFASIFILSAWQMFNEFG+NGGPAAAELS KVAVLRRNLSSKLGVAIP+I
Sbjct: 1   MRFFSFLGRVLFASIFILSAWQMFNEFGHNGGPAAAELSLKVAVLRRNLSSKLGVAIPEI 60

Query: 61  DIRHLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFNYSPQKPSFGILL- 120
           D+RHLVAISLSLKGIGGLLFVFGS VGAYLLLLQLAIITPVLYDFFNYSPQKP F ILL 
Sbjct: 61  DVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLF 120

Query: 121 SDFLQHIALFGALLFFLGMKSTVPKRQPKKKAAKTKTY 158
           SDFLQHIALFGAL+FFLGMK+T P++  KKK +KTKTY
Sbjct: 121 SDFLQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY 158

[Close]

BLAST of Tan0006054 vs. ExPASy TrEMBL
Match: A0A6J1ISL2 (uncharacterized protein LOC111479010 OS=Cucurbita maxima OX=3661 GN=LOC111479010 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 7.6e-67
Identity = 139/158 (87.97%), Postives = 148/158 (93.67%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASIFILSAWQMFNEFGNNGGPAAAELSPKVAVLRRNLSSKLGVAIPDI 60
           M FFSFLGRVLFASIFILSAWQMFNEFG+NGGPA+AEL+ KVAVLRRNLSSKLGVAIPDI
Sbjct: 1   MRFFSFLGRVLFASIFILSAWQMFNEFGHNGGPASAELALKVAVLRRNLSSKLGVAIPDI 60

Query: 61  DIRHLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFNYSPQKPSFGILL- 120
           D+RHLVAISLSLKGIGGLLFVFGS VGAYLLLLQLAIITPVLYDFFNYSPQKP F ILL 
Sbjct: 61  DVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLF 120

Query: 121 SDFLQHIALFGALLFFLGMKSTVPKRQPKKKAAKTKTY 158
           SDFLQHIALFGAL+FFLGMK+T P++  KKK +KTKTY
Sbjct: 121 SDFLQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY 158

[Close]

BLAST of Tan0006054 vs. ExPASy TrEMBL
Match: A0A1S3AXB3 (uncharacterized protein LOC103483616 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483616 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 1.0e-63
Identity = 134/158 (84.81%), Postives = 142/158 (89.87%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASIFILSAWQMFNEFGNNGGPAAAELSPKVAVLRRNLSSKLGVAIPDI 60
           MGFFSF GR+LFAS FILSAWQMFNEFGNNGGPAAAELS KVAVLRRNLSSKL VAIPDI
Sbjct: 1   MGFFSFFGRLLFASFFILSAWQMFNEFGNNGGPAAAELSSKVAVLRRNLSSKLAVAIPDI 60

Query: 61  DIRHLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFNYSPQKPSFGILLS 120
           D+RHLVA+SLSLKGIGGLLFVFGS VGAYLLLL LAIITPVL+DFFN+S QKP+FGI LS
Sbjct: 61  DVRHLVALSLSLKGIGGLLFVFGSRVGAYLLLLHLAIITPVLFDFFNFSLQKPNFGIPLS 120

Query: 121 DFLQHIALFGALLFFLGMKSTV-PKRQPKKKAAKTKTY 158
           DFLQHIALFGALLFFLGMKST  PK+  KKK  K K +
Sbjct: 121 DFLQHIALFGALLFFLGMKSTTSPKKPLKKKTQKAKAH 158

[Close]

BLAST of Tan0006054 vs. TAIR 10
Match: AT5G43460.1 (HR-like lesion-inducing protein-related )

HSP 1 Score: 186.0 bits (471), Expect = 2.3e-47
Identity = 95/158 (60.13%), Postives = 124/158 (78.48%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASIFILSAWQMFNEFGNNGGPAAAELSPKVAVLRRNLSSKLGVAIPDI 60
           MGFFSFLGRVLFAS+FILSAWQMFN+    GGPAA EL+PK+ +++ +LSS+LGV +P I
Sbjct: 1   MGFFSFLGRVLFASLFILSAWQMFND----GGPAAKELAPKLDLVKAHLSSRLGVTLPKI 60

Query: 61  DIRHLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFNYSPQKPSFGILLS 120
           ++R +VA  ++LKG+GGLLFV G++ GAYLL   L +  P+LYDF+NY PQ+  F +LL+
Sbjct: 61  EVRQVVATIIALKGVGGLLFVIGNTFGAYLLASYLVVFGPILYDFYNYGPQERHFSLLLT 120

Query: 121 DFLQHIALFGALLFFLGMKSTVP------KRQPKKKAA 153
           +FLQ +ALFGALLFF+GMK++ P      KR PK KAA
Sbjct: 121 EFLQSVALFGALLFFIGMKNSTPAKKNLKKRTPKPKAA 154

[Close]

BLAST of Tan0006054 vs. TAIR 10
Match: AT1G04340.1 (HR-like lesion-inducing protein-related )

HSP 1 Score: 185.3 bits (469), Expect = 3.9e-47
Identity = 91/159 (57.23%), Postives = 126/159 (79.25%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASIFILSAWQMFNEFGNNGGPAAAELSPKVAVLRRNLSSKLGVAIPDI 60
           MGFFSFLGRVLFAS+FILSAWQMFN+FG +GGPAA EL+PK+ + + +LSS LGV++P++
Sbjct: 1   MGFFSFLGRVLFASLFILSAWQMFNDFGTDGGPAAKELAPKLDLTKAHLSSILGVSLPNL 60

Query: 61  DIRHLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFNYSPQKPSFGILLS 120
           +++ +V   ++LKG+GGLLFV G+  GAYLL + L +++P+LYDF+NY P+   F +LL+
Sbjct: 61  EVKQVVWAIVALKGLGGLLFVIGNIFGAYLLAVYLVVVSPILYDFYNYGPEDRQFSLLLT 120

Query: 121 DFLQHIALFGALLFFLGMKST-------VPKRQPKKKAA 153
           +FLQ +AL GALLFF+GMK++       + KR PK KAA
Sbjct: 121 EFLQSVALLGALLFFIGMKNSTTSSKRILKKRTPKPKAA 159

[Close]

BLAST of Tan0006054 vs. TAIR 10
Match: AT4G14420.1 (HR-like lesion-inducing protein-related )

HSP 1 Score: 159.8 bits (403), Expect = 1.7e-39
Identity = 85/156 (54.49%), Postives = 109/156 (69.87%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASIFILSAWQMFNEFGNNGGPAAAELSPKVAVLRRNLSSKLGVAIPDI 60
           M   SFLGR LF S+F+LSAWQ FN+FG +GG +A  L PK      ++++  G  +P +
Sbjct: 1   MELASFLGRALFVSVFLLSAWQEFNDFGEDGGRSAKSLKPKFNAFVNHVTTHTGQQLPPV 60

Query: 61  DIRHLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFNYSPQKPSFGILLS 120
           D++ LVA +++LKGIGGLLFVFGSS+GAYLLLL  A+ TP+LYDF+NY   +  FG L S
Sbjct: 61  DMKILVAAAIALKGIGGLLFVFGSSLGAYLLLLHQAVATPILYDFYNYDVDRKEFGQLFS 120

Query: 121 DFLQHIALFGALLFFLGMK-STVPKRQPKKKAAKTK 156
            F Q +AL G LLFF+GMK S    RQ +KKA K K
Sbjct: 121 KFTQSLALLGGLLFFIGMKNSRKHGRQLRKKAPKAK 156

[Close]

BLAST of Tan0006054 vs. TAIR 10
Match: AT3G23190.1 (HR-like lesion-inducing protein-related )

HSP 1 Score: 73.6 bits (179), Expect = 1.6e-13
Identity = 42/119 (35.29%), Postives = 67/119 (56.30%), Query Frame = 0


Query: 8   GRVLFASIFILSAWQMFNEFGNNGGPAAAELSPKVAVLRRNLSSKLGVAIPDIDIRHLVA 67
           GRV+FAS F++SAW+ +  F    G AA EL PK+        +             +VA
Sbjct: 25  GRVVFASAFLVSAWREYYGF----GLAADELRPKLGFFENQAKA-------------IVA 84

Query: 68  ISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFNYSPQKPSFGILLSDFLQHI 127
           + + +K +GG+LF+F + VGA LLL+  AI++P+LYDF+N    +  F +  + F + +
Sbjct: 85  LGILMKFVGGILFIFNTYVGAALLLVYQAILSPILYDFYNRDYDRDHFTVFYTKFKEFV 126

[Close]

BLAST of Tan0006054 vs. TAIR 10
Match: AT3G23180.1 (HR-like lesion-inducing protein-related )

HSP 1 Score: 66.2 bits (160), Expect = 2.6e-11
Identity = 39/112 (34.82%), Postives = 58/112 (51.79%), Query Frame = 0


Query: 7   LGRVLFASIFILSAWQMFNEFGNNGGPAAAELSPKVAVLRRNLSSKLGVAIPDIDIRHLV 66
           +GR LFAS F LS+W  + E   N        SPK                    I+HL+
Sbjct: 24  IGRALFASSFFLSSWHDYMELKANWNGTEDYWSPK-------------FGYSGDQIKHLM 83

Query: 67  AISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFNYSPQKPSFGIL 119
            +S+ ++ +GGL+F++GS  GA+LLL+   I T V +DF+N+      FG+L
Sbjct: 84  TVSIIVRTLGGLIFIYGSFFGAFLLLMYQGIATMVHHDFYNHRLDTEEFGLL 122

The following BLAST results are available for this feature:

BLAST of Tan0006054 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0006054 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6597378.1	8.5e-73	94.27	hypothetical protein SDJN03_10558, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023538935.1	1.9e-72	94.27	uncharacterized protein LOC111799718 [Cucurbita pepo subsp. pepo]	[more]
XP_022942464.1	7.2e-72	93.63	uncharacterized protein LOC111447492 [Cucurbita moschata]	[more]
XP_022975056.1	6.1e-71	92.99	uncharacterized protein LOC111474025 [Cucurbita maxima]	[more]
XP_022924237.1	9.2e-67	88.61	uncharacterized protein LOC111431764 [Cucurbita moschata]	[more]

BLAST of Tan0006054 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FRE6	3.5e-72	93.63	uncharacterized protein LOC111447492 OS=Cucurbita moschata OX=3662 GN=LOC1114474...	[more]
A0A6J1ID53	3.0e-71	92.99	uncharacterized protein LOC111474025 OS=Cucurbita maxima OX=3661 GN=LOC111474025...	[more]
A0A6J1E8C2	4.4e-67	88.61	uncharacterized protein LOC111431764 OS=Cucurbita moschata OX=3662 GN=LOC1114317...	[more]
A0A6J1ISL2	7.6e-67	87.97	uncharacterized protein LOC111479010 OS=Cucurbita maxima OX=3661 GN=LOC111479010...	[more]
A0A1S3AXB3	1.0e-63	84.81	uncharacterized protein LOC103483616 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Tan0006054 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43460.1	2.3e-47	60.13	HR-like lesion-inducing protein-related	[more]
AT1G04340.1	3.9e-47	57.23	HR-like lesion-inducing protein-related	[more]
AT4G14420.1	1.7e-39	54.49	HR-like lesion-inducing protein-related	[more]
AT3G23190.1	1.6e-13	35.29	HR-like lesion-inducing protein-related	[more]
AT3G23180.1	2.6e-11	34.82	HR-like lesion-inducing protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008637	HR-like lesion-inducer	PFAM	PF05514	HR_lesion	coord: 1..138 e-value: 7.5E-55 score: 184.9
None	No IPR available	PANTHER	PTHR31474	FAMILY NOT NAMED	coord: 1..156
None	No IPR available	PANTHER	PTHR31474:SF4	BNAA10G27800D PROTEIN	coord: 1..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0006054.1	Tan0006054.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane